Cp4.1LG11g05500 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG11g05500
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionProteasome subunit beta
LocationCp4.1LG11: 3193628 .. 3198796 (-)
RNA-Seq ExpressionCp4.1LG11g05500
SyntenyCp4.1LG11g05500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAACGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAACTACTTGATCGAGAAGTAAGGTCGAAGAACAAAAGCCCCCAACACCAAAATCGAGCTCTTTCATTCTCCGGCAATACGTCCTCTTTCACGACCGTATTTGAATTTCGCTTTGGTTTCTTTCGAGTAGCTTCTCACCGCCATGGATCTCAACATGGATCTTAATGCTCCTCACTCCATGGGTACCACCATCATCGGCGTCACATACGACGGCGGCGTTGTCCTCGGCGCCGATTCTCGTACCAGCACTGGTAAATCTATCGTAGTTTCTTAAAGAGATGTCCGAAATGATTAAATTCAATTGGAGGAAAAGTAGTAATAATTTGTCTCTTTGTCGACCTGGGAAGAAAATCATTTTGTATCCATCACATTCGGAATCTTGCTTAGCTTTGTTGTTTCGAGTTCTTATGAGTAGGTAATCATTGAAAGAGTTCATTTCTCGTGTAGTTCACCCCCTCTCCCCTGACTGGGCATATAGCGAGAGTAATTGAGTGGATTTCGTTGTTGGTTGGGGTTTCTTCATGTGAATCTTCTGCATTTGTTAGAATATTACATGACTGAAATTTAGGCGGGTCTTTTCAAGCATAGCTGCTTAATATGACGAGCTTTAGGGAATACCAATTGTCCGTTACAGTGACGGGTTCTGAAAAATTATGTAATGTAGTGGAGGGGATGCACGAAGAGTTTTTAAACTCATCTCCCAAGCAATCATCAATAACATGTTTCATATTAAATGGAAAAATTAATCTCAGTTCGTTTGTTTGTATCCAGTTTTTCGCTCTGTGCGTGCTTTCTTGTGCTGCATTGATGTTAATATTTTGTTTATTGTTCTTGTGATAGGTGTTTATGTGGCTAATCGTGCATCTGACAAAATTACAAAGCTTACTGACAACGTCTATGTTTGTCGGTCTGGCTCGGTATTTCCATTTCTGTTATCAAATTTTCCCTTCAACTTCTTGTTCTAGAATTAAGATGTCTGAAAATCTCTCAGTTCATGGGTGTTTGCTATTGTTTCATAAATGTTTTATTTTGTGCCTCTTGCAGGCTGCAGATTCTCAAATTGTCTCTGATTACGTTCGTCATTTCCTTCATCAGCATACGTGAGTGCTTTAATTATTGGCGGTGTTATTGCAAATTTGAATTTGTAGGTTAATTGTAACTCGATCACTTTGAGCAATTTTCGTTTATTGTTTGTGATGAATTTTGGAAGATTGGATCTGCTAGCAAGTGTATTTCTTTTGTCTGTTTTCTCAGTGAGTTTACAAACTGTAGGAAAAAGTTGAAAATTCTTTACTTCATTCCGGTGTATAGAAATAATTCTACACCTAAATCAATTACTAAGGTGTTGGAGGAAGAAGCACGATGATTTATTTTTCTGTCACTTGATACGATAACAAGCCGTTATGTTAACTAGCTTGATGAGGTTAAGGCCTAGCGTATAGGTGATGCTCTCCTGGGGATTATTGTTATATTTCTAGATATGCTTGATCTGGTGGGAATTTGTACTTCGGATTCATTAAAGATGGTGTTTATTTAGAACTTCTCTAGGAAACTGTACTTGTTTATACATCCCCTACGAACTGTCTGAAGATATGCTGTTATTGGTAGTGGTCATACTGTTATTCTTTTTAATCCTAAATTGCTCTTACTACCTCCGTTTCATTATTGTCTCTTTGCTGATATGTCAACCTAAAGACGGTTGTGACACATTCTGATTGCTGGGTTTAGTTTTCATTATTAACAAGTTATTTGATATAAATGAGGAAGCCACTTGAATTTATGGGCGAGTTTTTGCCTGTCGAGTTCTTTCTTATTATGTATTATTTTTTATGCACAGGATACAGCTTGGCCAGCCTGCGACTGTTAAAGTGGCTGCAAACCTTGTTAGGCTATTAGCATATAACAACAAGGTAGGAGCTCATATTAGTTTGTTCAAAAGTATTCTCATAAAAAATGTATGGATAGCAATTTTGGATAAGAAACGATAACAATTCATTGAAACAATACAAATTCTTCAACCCAGACAAGGAGATTGAAAAAAGCTCTCCAATTGGCCAAAATTATGGAAATAGACTAATCACACAAGGGCCTAGCTGGAGAACAGAAACCTCTTTTCTATAGATTTATTTAGCAACCAGAGCTCGCAGAAAATAACCATAATCATATTGATCCACAGAACCATTCATTTTTCTCTGAAAGGGGGACTGCTCTAGTCCTGTTGTGTACATATTTTAGCATTAATGATTGATAAGTTTTACCCTCGTTTTTTGGAATAAAAGATAATTGTATTAAAATTTAAGTCCAAATATGAGTTCAAAAGGGGAGGAGGAGGAAACGTCCCAACTAGCTTAAGTAGATAAAAGGATAACTCTGCAATTGAGTAGAACATCATCACAGTTCCTTTCCTTTCTGTTCTTGTGTAATGAGCATTTCAGAGTTGCATGTTAAAATAAAACGAGAAAGAGAGTAAAGGAAATGAATTAGGTCAAATATAAATAATGTATGGACATTTTAATACTGGAATTCACTTAGAATGAAGAACCTGTGACTTGTGAGACCGCACAAATTTGAATTCAGCCTTTATGTTTTCTTGAAAATGATTTGGAGCTTTTCATAAAAATACGTTGTATTGTGTTTAGGATCATTACGGGTTGTTTATGAATTCAACATTAGGAAAGAATGAGAGATTTTCAGGGTTCTACTAAGCATCCACTTCTGTTTTTATTTTCTTTTATTTTCTAATTTTTATCTTAGTGTTTATCCATTCAAACAATCCAAAACAAAAACCAACTGAATCGCTTAACTTTGTTTTTGTTGGATAGTTGTTTGATGGACTTTGATACATTCCTCTTTTAATATTGTGGAAAAGATACTCACCCTTTGCTTTAATGTGGTTAGGTGGGGTATCTGGGGACTGTGGGAGGAGGGTCTCTCTTCCTCTCTCTCTAAACCAGTTTTGTATGCGAGTGAAGTCACACACCACTTAACTCCAATAAAATGTTCACAAGAGTGCTCTTTTCTTGCTATGTTCAAATGAATCTATATTCTTGTTTTTCTTATCCAAACTAAATACATGCTTTAATATCAATGCCGTTTCATTGAATGGGCAGGATATGTTACAAACTGGCCTTATTGTTGGTGGATGGGACAAGTATAACGGTGGTCGAATCTATGGTATTCCTCTTGGTGGAACAATAATAGAGCAGCCATTTGCTATTGGAGGTACCCTATTGGTTATAAAAAAATAGAAGTCATGATGTATGGTGAATTCTTTTCTGGCATCCTTCATGTTTTCTAGCTTTATGATGTGGTCTTCTGCTTTATCATCCTTGAATGAATGAGTTGTGATTAGATTTTTATGCCCCTACATCTGGTTTTTGATCTACTGAACCCATAGAGATGGGAATCTCAAGCATGTCTTCTATGTCGTGAAAATATCGTCCTCTCCCCCCTTCTCTTCTTTTGGTAATTAGATTTCTGACATTTGCTGTTACAATCCTTTGTTCTCTACTTGCAAGTATGATCATTGCCTGGTTTCTCTTATTATTTTACAGGATCTGGTTCCAGTTACTTGTATGGTTTTTTTGATCAAGCGTGGAGAGAAGGAATGACTAGGGAAGAAGCTGAGGTATTTCTACTACTCTTATTTGCGAATCAAGTGTTCTGCATTATTATATTCTTTGTGCTTGCTGACTCAAATGCATACGGTTTTTTGGATGCATTCTTTTAGACTCCAACCACTTCCAAATATTGGTATTTCTTTTTTCGTATAATAGCCCAACGTTCACGGGCTAGCACATATTGTCCTCTTTAGGCCTTTTCTTTCTGGCTTCCCCTCAAGGATTTTAAAACGCGTATGCTAGAGAGAGGTTTCCATACCCTTATAAAGAATGCTTCGTTCTCCTCTCTGACCGAGATGGATTACGAGTGTTTATCTGTTCTGCATTCCATGCTCACCTGTAAGATGCGCATCGTAGTTACTTAAAGTGAATTTGTGACGACGTGTAAGAAAAGTTCCTTTTAAGTGAAATATTTCTTCTCTAAGCACCTTTCGAGAAAGCACTTATTAAGGGGGAGTTTGCTAAGTGCAGCCTCTGAGACATGAACTTAGTCGACGGGTTTTTTTTGTCTCTCTGTGATTATATGCTATCATTTGCAGCAATTGGTGGTTAAGGCCGTTTCTCTTGCCATTGCTCGAGATGGTGCTAGTGGTGGTGTTGTCCGTACTGTTACTGTAAGAGAATGTTCTTTTATAACATAATCTATTACTTATAATCATGTTCAATCTTTAGTTCTCATAGCTAAAAACTGTTGCGTGAACTCGGGCATTTTTGCAGATAAATTCCGAGGGAGTTACAAGAAAATTCTATCCCGGGGATCAGCTACCGCTGTGGCACGAGGAATTAGAACCGAAAAATTCATTACTGGATGTTCTGAATGCTTCTAGCCCCGAACCGATGAACGTATAAAGCTAATGCTGGGATCTCTGCCATAAGTTCTGCTGGTAACTCTTATCTGGTTAGGCTATTTACTTTTCTGGAAAAAAAAAAGGAAGAAAAAACATGCGCCCTCTTTGTAAACCTAATTATGTTTTACTTTGCATGAATTTTTTAGTGTACAATGTTTGAGTTTACTCTTGATCTATGGCACATGCTTATTCCTGCTGCCAAAAAACAAAACAAACCCGAACCGAACCATTAACCGTGGGGGGTTGTGATTCTCTCGTTGTCAAATTCGTTTAGTGTCTTCTATAAACGGATGCAACTCATTGTAGACTTTCGTTTTCTCAATGATCATATCCAGACTATTGATGAGTTGGTTTCCTCATAAATTGGAAGAAGCTCTTAATCCACAATTGTTTTTAGGTCATTTGAAAGAGCAATAGCTTCTACATGCTCGGGTGTGCTAAAATGAACGTTAAAGTCGTTCATAGCGATCACGAACAATGGCACCAAACCCTACCTCGTTAGAATTCTTTTAAGCATCGGAACTTAATTTTGTACGTATTAAGAGATGGTGGCTTCCAATGGTCAATGGGTTGTGTAATTACACTCACAAAAGTCCACAATTGTAATTTATTACAAAAGTCTTCAAAGTGCTTTCGAAGGTCAATAGTCAT

mRNA sequence

TAACGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAACTACTTGATCGAGAAGTAAGGTCGAAGAACAAAAGCCCCCAACACCAAAATCGAGCTCTTTCATTCTCCGGCAATACGTCCTCTTTCACGACCGTATTTGAATTTCGCTTTGGTTTCTTTCGAGTAGCTTCTCACCGCCATGGATCTCAACATGGATCTTAATGCTCCTCACTCCATGGGTACCACCATCATCGGCGTCACATACGACGGCGGCGTTGTCCTCGGCGCCGATTCTCGTACCAGCACTGGTGTTTATGTGGCTAATCGTGCATCTGACAAAATTACAAAGCTTACTGACAACGTCTATGTTTGTCGGTCTGGCTCGGCTGCAGATTCTCAAATTGTCTCTGATTACGTTCGTCATTTCCTTCATCAGCATACGATACAGCTTGGCCAGCCTGCGACTGTTAAAGTGGCTGCAAACCTTGTTAGGCTATTAGCATATAACAACAAGGATATGTTACAAACTGGCCTTATTGTTGGTGGATGGGACAAGTATAACGGTGGTCGAATCTATGGTATTCCTCTTGGTGGAACAATAATAGAGCAGCCATTTGCTATTGGAGGATCTGGTTCCAGTTACTTGTATGGTTTTTTTGATCAAGCGTGGAGAGAAGGAATGACTAGGGAAGAAGCTGAGCAATTGGTGGTTAAGGCCGTTTCTCTTGCCATTGCTCGAGATGGTGCTAGTGGTGGTGTTGTCCGTACTGTTACTATAAATTCCGAGGGAGTTACAAGAAAATTCTATCCCGGGGATCAGCTACCGCTGTGGCACGAGGAATTAGAACCGAAAAATTCATTACTGGATGTTCTGAATGCTTCTAGCCCCGAACCGATGAACGTATAAAGCTAATGCTGGGATCTCTGCCATAAGTTCTGCTGGTCATTTGAAAGAGCAATAGCTTCTACATGCTCGGGTGTGCTAAAATGAACGTTAAAGTCGTTCATAGCGATCACGAACAATGGCACCAAACCCTACCTCGTTAGAATTCTTTTAAGCATCGGAACTTAATTTTGTACGTATTAAGAGATGGTGGCTTCCAATGGTCAATGGGTTGTGTAATTACACTCACAAAAGTCCACAATTGTAATTTATTACAAAAGTCTTCAAAGTGCTTTCGAAGGTCAATAGTCAT

Coding sequence (CDS)

ATGGATCTCAACATGGATCTTAATGCTCCTCACTCCATGGGTACCACCATCATCGGCGTCACATACGACGGCGGCGTTGTCCTCGGCGCCGATTCTCGTACCAGCACTGGTGTTTATGTGGCTAATCGTGCATCTGACAAAATTACAAAGCTTACTGACAACGTCTATGTTTGTCGGTCTGGCTCGGCTGCAGATTCTCAAATTGTCTCTGATTACGTTCGTCATTTCCTTCATCAGCATACGATACAGCTTGGCCAGCCTGCGACTGTTAAAGTGGCTGCAAACCTTGTTAGGCTATTAGCATATAACAACAAGGATATGTTACAAACTGGCCTTATTGTTGGTGGATGGGACAAGTATAACGGTGGTCGAATCTATGGTATTCCTCTTGGTGGAACAATAATAGAGCAGCCATTTGCTATTGGAGGATCTGGTTCCAGTTACTTGTATGGTTTTTTTGATCAAGCGTGGAGAGAAGGAATGACTAGGGAAGAAGCTGAGCAATTGGTGGTTAAGGCCGTTTCTCTTGCCATTGCTCGAGATGGTGCTAGTGGTGGTGTTGTCCGTACTGTTACTATAAATTCCGAGGGAGTTACAAGAAAATTCTATCCCGGGGATCAGCTACCGCTGTGGCACGAGGAATTAGAACCGAAAAATTCATTACTGGATGTTCTGAATGCTTCTAGCCCCGAACCGATGAACGTATAA

Protein sequence

MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKYNGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV
Homology
[Close]
BLAST of Cp4.1LG11g05500 vs. ExPASy Swiss-Prot
Match: Q8LD27 (Proteasome subunit beta type-6 OS=Arabidopsis thaliana OX=3702 GN=PBA1 PE=1 SV=2)

HSP 1 Score: 421.0 bits (1081), Expect = 8.8e-117
Identity = 204/233 (87.55%), Postives = 224/233 (96.14%), Query Frame = 0 

Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60
           MDLN+D  APHSMGTTIIGVTY+GGVVLGADSRTSTG+YVANRASDKIT+LTDNVYVCRS
Sbjct: 1   MDLNLD--APHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120
           GSAADSQ+VSDYVR+FLHQHTIQ GQPATVKV+ANL+R+LAYNNK+MLQTGLIVGGWDKY
Sbjct: 61  GSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKY 120

Query: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
            GG+IYGIPLGGT++EQPFAIGGSGSSYLYGFFDQAW++ MT+EEAEQLVVKAVSLAIAR
Sbjct: 121 EGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPM 234
           DGASGGVVRTV INSEGVTR FYPGD+L LWHEELEP+NSLLD+LNA+ PEPM
Sbjct: 181 DGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPM 231

[Close]
BLAST of Cp4.1LG11g05500 vs. ExPASy Swiss-Prot
Match: P93395 (Proteasome subunit beta type-6 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 2.2e-112
Identity = 198/230 (86.09%), Postives = 215/230 (93.48%), Query Frame = 0 

Query: 4   NMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSA 63
           N D++ PHSMGTTIIGVTY+GGVVLGADSRTSTG+YVANRASDKIT+LTDNVYVCRSGSA
Sbjct: 3   NTDVDQPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSA 62

Query: 64  ADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKYNGG 123
           ADSQIVSDYVR+FLHQHTIQLGQPATVKVAANL RLL+YNNKD LQTG+I+GGWDKY GG
Sbjct: 63  ADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLTRLLSYNNKDRLQTGMIIGGWDKYEGG 122

Query: 124 RIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGA 183
           +IYGIP GGT++EQPFAIGGSGSSYLYGFFDQAW+EGMT+EEAE+LVV AVSLAIARDGA
Sbjct: 123 KIYGIPPGGTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARDGA 182

Query: 184 SGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPM 234
           SGGVVRTVTIN +G TRKFY GD L LWHEELEP NSLLDV+ ASSP PM
Sbjct: 183 SGGVVRTVTINKDGATRKFYSGDSLQLWHEELEPVNSLLDVVFASSPVPM 232

[Close]
BLAST of Cp4.1LG11g05500 vs. ExPASy Swiss-Prot
Match: Q55GJ6 (Proteasome subunit beta type-6 OS=Dictyostelium discoideum OX=44689 GN=psmB6 PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.6e-60
Identity = 106/201 (52.74%), Postives = 151/201 (75.12%), Query Frame = 0 

Query: 13  MGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAADSQIVSDY 72
           +GT+I+ V YDGGV++GADSRT+TG Y+ANR ++KIT + + +Y CRSGSAAD+Q +SDY
Sbjct: 13  LGTSIMAVEYDGGVIMGADSRTTTGAYIANRVTNKITPIHERIYCCRSGSAADTQAISDY 72

Query: 73  VRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKYNGGRIYGIPLGG 132
           VR++L  HT +L     VK AA+L +LL Y+NK+ L  G+IV GWDK+ GG +Y I LGG
Sbjct: 73  VRYYLEMHTSELCDEPDVKTAASLFQLLCYSNKNNLMAGIIVAGWDKHQGGSVYNISLGG 132

Query: 133 TIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGASGGVVRTVT 192
           ++++QPFAIGGSGS+Y+YG+ D  ++  MT++E  + V  +++LA+ RDG+SGGV+R   
Sbjct: 133 SMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDECIEFVQNSLALAMFRDGSSGGVIRLCI 192

Query: 193 INSEGVTRKFYPGDQLPLWHE 214
           I+  GV RK  PG+ LP + E
Sbjct: 193 IDKNGVERKMIPGNNLPRFWE 213

[Close]
BLAST of Cp4.1LG11g05500 vs. ExPASy Swiss-Prot
Match: Q3MHN0 (Proteasome subunit beta type-6 OS=Bos taurus OX=9913 GN=PSMB6 PE=1 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.2e-57
Identity = 105/202 (51.98%), Postives = 144/202 (71.29%), Query Frame = 0 

Query: 8   NAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAADSQ 67
           N   S GTTI+ V +DGGVVLGADSRT+TG Y+ANR +DK+T + D ++ CRSGSAAD+Q
Sbjct: 28  NREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQ 87

Query: 68  IVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKYNGGRIYG 127
            V+D V + L  H+I+L +P  V  AA+L + + Y  ++ L  G+I+ GWD   GG++Y 
Sbjct: 88  AVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYS 147

Query: 128 IPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGASGGV 187
           +P+GG ++ QPFAIGGSGSSY+YG+ D  +REGMT+EE  Q    A++LA+ RDG+SGGV
Sbjct: 148 VPMGGMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGV 207

Query: 188 VRTVTINSEGVTRKFYPGDQLP 210
           +R   I   GV R+   GDQ+P
Sbjct: 208 IRLAAIAEPGVERQVLLGDQIP 229

[Close]
BLAST of Cp4.1LG11g05500 vs. ExPASy Swiss-Prot
Match: P28073 (Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3)

HSP 1 Score: 221.9 bits (564), Expect = 7.8e-57
Identity = 103/202 (50.99%), Postives = 144/202 (71.29%), Query Frame = 0 

Query: 8   NAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAADSQ 67
           N   S GTTI+ V +DGGVVLGADSRT+TG Y+ANR +DK+T + D+++ CRSGSAAD+Q
Sbjct: 27  NREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQ 86

Query: 68  IVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKYNGGRIYG 127
            V+D V + L  H+I+L +P  V  AA+L + + Y  ++ L  G+I+ GWD   GG++Y 
Sbjct: 87  AVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYS 146

Query: 128 IPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGASGGV 187
           +P+GG ++ Q FAIGGSGSSY+YG+ D  +REGMT++E  Q    A++LA+ RDG+SGGV
Sbjct: 147 VPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGV 206

Query: 188 VRTVTINSEGVTRKFYPGDQLP 210
           +R   I   GV R+   GDQ+P
Sbjct: 207 IRLAAIQQSGVERQVLLGDQIP 228

[Close]
BLAST of Cp4.1LG11g05500 vs. NCBI nr
Match: XP_022962546.1 (proteasome subunit beta type-6-like [Cucurbita moschata] >XP_023545809.1 proteasome subunit beta type-6-like [Cucurbita pepo subsp. pepo] >KAG7029736.1 Proteasome subunit beta type-6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 472 bits (1214), Expect = 8.29e-168
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0 

Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120

Query: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
           NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR
Sbjct: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235
           DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV
Sbjct: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235

[Close]
BLAST of Cp4.1LG11g05500 vs. NCBI nr
Match: XP_022996805.1 (proteasome subunit beta type-6-like [Cucurbita maxima])

HSP 1 Score: 470 bits (1209), Expect = 4.80e-167
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0 

Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120

Query: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
           NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR
Sbjct: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235
           DGASGGVVRTVTINSEGV RKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV
Sbjct: 181 DGASGGVVRTVTINSEGVARKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235

[Close]
BLAST of Cp4.1LG11g05500 vs. NCBI nr
Match: XP_038883996.1 (proteasome subunit beta type-6 [Benincasa hispida])

HSP 1 Score: 468 bits (1203), Expect = 3.94e-166
Identity = 231/235 (98.30%), Postives = 234/235 (99.57%), Query Frame = 0 

Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTYDGGV+LGADSRTSTGVYVANRASDKITKLTDNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVILGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120

Query: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
            GGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAW+EGMTREEAEQLVVKAVSLAIAR
Sbjct: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTREEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235
           DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMN+
Sbjct: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNI 235

[Close]
BLAST of Cp4.1LG11g05500 vs. NCBI nr
Match: XP_022132123.1 (proteasome subunit beta type-6 [Momordica charantia])

HSP 1 Score: 465 bits (1197), Expect = 3.24e-165
Identity = 230/235 (97.87%), Postives = 234/235 (99.57%), Query Frame = 0 

Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLL+YNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120

Query: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
           +GGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGM REEAEQLVVKAVSLAIAR
Sbjct: 121 DGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMIREEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235
           DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEE+EPKNSLLDVLNASSPEPMN+
Sbjct: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 235

[Close]
BLAST of Cp4.1LG11g05500 vs. NCBI nr
Match: XP_022951437.1 (proteasome subunit beta type-6 [Cucurbita moschata] >XP_023002488.1 proteasome subunit beta type-6 [Cucurbita maxima] >XP_023537465.1 proteasome subunit beta type-6 [Cucurbita pepo subsp. pepo] >KAG7020325.1 Proteasome subunit beta type-6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 463 bits (1192), Expect = 1.87e-164
Identity = 229/235 (97.45%), Postives = 233/235 (99.15%), Query Frame = 0 

Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTY+GGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120

Query: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
            GGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAW+EGMTR+EAEQLVVKAVSLAIAR
Sbjct: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTRDEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235
           DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLD LNASSPEPMN+
Sbjct: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDALNASSPEPMNI 235

[Close]
BLAST of Cp4.1LG11g05500 vs. ExPASy TrEMBL
Match: A0A6J1HDK0 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111462944 PE=3 SV=1)

HSP 1 Score: 472 bits (1214), Expect = 4.01e-168
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0 

Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120

Query: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
           NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR
Sbjct: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235
           DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV
Sbjct: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235

[Close]
BLAST of Cp4.1LG11g05500 vs. ExPASy TrEMBL
Match: A0A6J1K7T1 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111491932 PE=3 SV=1)

HSP 1 Score: 470 bits (1209), Expect = 2.32e-167
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0 

Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120

Query: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
           NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR
Sbjct: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235
           DGASGGVVRTVTINSEGV RKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV
Sbjct: 181 DGASGGVVRTVTINSEGVARKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235

[Close]
BLAST of Cp4.1LG11g05500 vs. ExPASy TrEMBL
Match: A0A6J1BVE0 (Proteasome subunit beta OS=Momordica charantia OX=3673 GN=LOC111005067 PE=3 SV=1)

HSP 1 Score: 465 bits (1197), Expect = 1.57e-165
Identity = 230/235 (97.87%), Postives = 234/235 (99.57%), Query Frame = 0 

Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLL+YNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120

Query: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
           +GGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGM REEAEQLVVKAVSLAIAR
Sbjct: 121 DGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMIREEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235
           DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEE+EPKNSLLDVLNASSPEPMN+
Sbjct: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 235

[Close]
BLAST of Cp4.1LG11g05500 vs. ExPASy TrEMBL
Match: A0A6J1KTP7 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111496312 PE=3 SV=1)

HSP 1 Score: 463 bits (1192), Expect = 9.08e-165
Identity = 229/235 (97.45%), Postives = 233/235 (99.15%), Query Frame = 0 

Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTY+GGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120

Query: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
            GGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAW+EGMTR+EAEQLVVKAVSLAIAR
Sbjct: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTRDEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235
           DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLD LNASSPEPMN+
Sbjct: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDALNASSPEPMNI 235

[Close]
BLAST of Cp4.1LG11g05500 vs. ExPASy TrEMBL
Match: A0A6J1GHL6 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111454253 PE=3 SV=1)

HSP 1 Score: 463 bits (1192), Expect = 9.08e-165
Identity = 229/235 (97.45%), Postives = 233/235 (99.15%), Query Frame = 0 

Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTY+GGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120

Query: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
            GGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAW+EGMTR+EAEQLVVKAVSLAIAR
Sbjct: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTRDEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235
           DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLD LNASSPEPMN+
Sbjct: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDALNASSPEPMNI 235

[Close]
BLAST of Cp4.1LG11g05500 vs. TAIR 10
Match: AT4G31300.1 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 421.0 bits (1081), Expect = 6.2e-118
Identity = 204/233 (87.55%), Postives = 224/233 (96.14%), Query Frame = 0 

Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60
           MDLN+D  APHSMGTTIIGVTY+GGVVLGADSRTSTG+YVANRASDKIT+LTDNVYVCRS
Sbjct: 1   MDLNLD--APHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120
           GSAADSQ+VSDYVR+FLHQHTIQ GQPATVKV+ANL+R+LAYNNK+MLQTGLIVGGWDKY
Sbjct: 61  GSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKY 120

Query: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
            GG+IYGIPLGGT++EQPFAIGGSGSSYLYGFFDQAW++ MT+EEAEQLVVKAVSLAIAR
Sbjct: 121 EGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPM 234
           DGASGGVVRTV INSEGVTR FYPGD+L LWHEELEP+NSLLD+LNA+ PEPM
Sbjct: 181 DGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPM 231

[Close]
BLAST of Cp4.1LG11g05500 vs. TAIR 10
Match: AT4G31300.3 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 421.0 bits (1081), Expect = 6.2e-118
Identity = 204/233 (87.55%), Postives = 224/233 (96.14%), Query Frame = 0 

Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60
           MDLN+D  APHSMGTTIIGVTY+GGVVLGADSRTSTG+YVANRASDKIT+LTDNVYVCRS
Sbjct: 1   MDLNLD--APHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120
           GSAADSQ+VSDYVR+FLHQHTIQ GQPATVKV+ANL+R+LAYNNK+MLQTGLIVGGWDKY
Sbjct: 61  GSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKY 120

Query: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
            GG+IYGIPLGGT++EQPFAIGGSGSSYLYGFFDQAW++ MT+EEAEQLVVKAVSLAIAR
Sbjct: 121 EGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPM 234
           DGASGGVVRTV INSEGVTR FYPGD+L LWHEELEP+NSLLD+LNA+ PEPM
Sbjct: 181 DGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPM 231

[Close]
BLAST of Cp4.1LG11g05500 vs. TAIR 10
Match: AT4G31300.2 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 416.4 bits (1069), Expect = 1.5e-116
Identity = 204/234 (87.18%), Postives = 224/234 (95.73%), Query Frame = 0 

Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60
           MDLN+D  APHSMGTTIIGVTY+GGVVLGADSRTSTG+YVANRASDKIT+LTDNVYVCRS
Sbjct: 1   MDLNLD--APHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNK-DMLQTGLIVGGWDK 120
           GSAADSQ+VSDYVR+FLHQHTIQ GQPATVKV+ANL+R+LAYNNK +MLQTGLIVGGWDK
Sbjct: 61  GSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKQNMLQTGLIVGGWDK 120

Query: 121 YNGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIA 180
           Y GG+IYGIPLGGT++EQPFAIGGSGSSYLYGFFDQAW++ MT+EEAEQLVVKAVSLAIA
Sbjct: 121 YEGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIA 180

Query: 181 RDGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPM 234
           RDGASGGVVRTV INSEGVTR FYPGD+L LWHEELEP+NSLLD+LNA+ PEPM
Sbjct: 181 RDGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPM 232

[Close]
BLAST of Cp4.1LG11g05500 vs. TAIR 10
Match: AT5G40580.1 (20S proteasome beta subunit PBB2 )

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-23
Identity = 65/184 (35.33%), Postives = 103/184 (55.98%), Query Frame = 0 

Query: 7   LNAPHSM--GTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAA 66
           L AP  +  GTTI+G+ +  GV+LGAD+R + G  VA++  +KI  +  N+Y C +G+AA
Sbjct: 30  LKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAA 89

Query: 67  DSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKYNGGR 126
           D++ V+D V   L  H  Q G+ + V  A  L++   ++ +  +   L++GG D   G  
Sbjct: 90  DTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVD-ITGPH 149

Query: 127 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGAS 186
           ++ I   G+    PFA  GSGS      F+  ++EG+TR+E  +LV +A+   I  D  S
Sbjct: 150 LHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGS 209

Query: 187 GGVV 189
           G  V
Sbjct: 210 GSNV 212

[Close]
BLAST of Cp4.1LG11g05500 vs. TAIR 10
Match: AT5G40580.2 (20S proteasome beta subunit PBB2 )

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-23
Identity = 65/184 (35.33%), Postives = 103/184 (55.98%), Query Frame = 0 

Query: 7   LNAPHSM--GTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAA 66
           L AP  +  GTTI+G+ +  GV+LGAD+R + G  VA++  +KI  +  N+Y C +G+AA
Sbjct: 30  LKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAA 89

Query: 67  DSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKYNGGR 126
           D++ V+D V   L  H  Q G+ + V  A  L++   ++ +  +   L++GG D   G  
Sbjct: 90  DTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVD-ITGPH 149

Query: 127 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGAS 186
           ++ I   G+    PFA  GSGS      F+  ++EG+TR+E  +LV +A+   I  D  S
Sbjct: 150 LHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGS 209

Query: 187 GGVV 189
           G  V
Sbjct: 210 GSNV 212

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g05500 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LD278.8e-11787.55Proteasome subunit beta type-6 OS=Arabidopsis thaliana OX=3702 GN=PBA1 PE=1 SV=2[more]
P933952.2e-11286.09Proteasome subunit beta type-6 OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
Q55GJ67.6e-6052.74Proteasome subunit beta type-6 OS=Dictyostelium discoideum OX=44689 GN=psmB6 PE=... [more]
Q3MHN01.2e-5751.98Proteasome subunit beta type-6 OS=Bos taurus OX=9913 GN=PSMB6 PE=1 SV=1[more]
P280737.8e-5750.99Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3[more]
BLAST of Cp4.1LG11g05500 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022962546.18.29e-168100.00proteasome subunit beta type-6-like [Cucurbita moschata] >XP_023545809.1 proteas... [more]
XP_022996805.14.80e-16799.57proteasome subunit beta type-6-like [Cucurbita maxima][more]
XP_038883996.13.94e-16698.30proteasome subunit beta type-6 [Benincasa hispida][more]
XP_022132123.13.24e-16597.87proteasome subunit beta type-6 [Momordica charantia][more]
XP_022951437.11.87e-16497.45proteasome subunit beta type-6 [Cucurbita moschata] >XP_023002488.1 proteasome s... [more]
BLAST of Cp4.1LG11g05500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HDK04.01e-168100.00Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111462944 PE=3 SV=1[more]
A0A6J1K7T12.32e-16799.57Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111491932 PE=3 SV=1[more]
A0A6J1BVE01.57e-16597.87Proteasome subunit beta OS=Momordica charantia OX=3673 GN=LOC111005067 PE=3 SV=1[more]
A0A6J1KTP79.08e-16597.45Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111496312 PE=3 SV=1[more]
A0A6J1GHL69.08e-16597.45Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111454253 PE=3 SV=1[more]
BLAST of Cp4.1LG11g05500 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G31300.16.2e-11887.55N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein [more]
AT4G31300.36.2e-11887.55N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein [more]
AT4G31300.21.5e-11687.18N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein [more]
AT5G40580.11.2e-2335.3320S proteasome beta subunit PBB2 [more]
AT5G40580.21.2e-2335.3320S proteasome beta subunit PBB2 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000243Peptidase T1A, proteasome beta-subunitPRINTSPR00141PROTEASOMEcoord: 22..37
score: 58.81
coord: 154..165
score: 44.7
coord: 179..190
score: 58.33
coord: 143..154
score: 66.29
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 13..193
e-value: 5.6E-47
score: 159.7
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1coord: 15..214
e-value: 4.6E-64
score: 217.6
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 10..215
NoneNo IPR availablePIRSRPIRSR600243-1PIRSR600243-1coord: 9..216
e-value: 2.0E-65
score: 218.1
NoneNo IPR availablePANTHERPTHR11599:SF151PROTEASOME SUBUNIT BETAcoord: 7..233
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 7..233
NoneNo IPR availableCDDcd03762proteasome_beta_type_6coord: 15..202
e-value: 2.02455E-121
score: 341.127
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 18..65
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 14..193
score: 48.773964

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g05500.1Cp4.1LG11g05500.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0051603 proteolysis involved in cellular protein catabolic process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0019774 proteasome core complex, beta-subunit complex
cellular_component GO:0005839 proteasome core complex
molecular_function GO:0004298 threonine-type endopeptidase activity