Cp4.1LG11g05340 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCGCTCGCTACTGCAAGAGAGAGAAGATGCAGAGTTTGCAAGATAAGGCTTCCGAGTGGAGCGGAGTGAAGCGTGAAGATGCCTTCGCCATCGATGAAGTTAATTTGTTTCAGAAGTTAGGCCTCCAGACGTTCGTCAATCTATCGACCAAATTCTATAACAGGTCTGTTTCTGTTCATGAATGCAGCATCGCGAAGTGATTTGAGTTGTGAGTTGTTTTCTTATTTTCCCGCGAGGAAGTAAATTGCTGTGGATTCCGAATCAGATTTAGTATTTTTCCTTTTTGTTTTGAGTAGACATGGAAATGAATTTTAATTGATGGCTAATTGATAAGCAAGATGATGGATGTGTCCAGGATCAGTTGATGAAATATCGTTAATGCTTTAGCTCTATCTCATCGAGATCAAACTGATTGTAATGTTGGTTGCTGTGTTTTATTGTTCCATCAACGTGAATACCAGGGTGTATGACGACGAGGAGGAGTGGTTCCGATCAATTTTTGGGAATTCGAAGAAAGAGGATGCAATTCAAAACCAGTACGAGTTCTTCGTGCAGAGAATGGGAGGTCCACCTCTATATTCTCAAAGAAAAGGCAAGTTTTTCATTTTTCTCGCTTGTAGTCTTCCAGTATGAATTGAAAACATAAACTGAAGAGACTTGCAGATCAAAAATTTGTTCTTTGTTCCTTTCCCAAATATGTTGCACAATGACAAATTATGTTGGTTCTCTGCCTGTTTGATAATCATTTGGTTTTTGCTGTTTGATAATCATTTGGTTTTTTAGCAATGAAAATCAAGCTTATAAACACTACTTCCAACAAGTTTCTATCTACTTGCTATCAATGTTTCAAAAAACCAACAAAGTTTTGAAAACTGAAAAAAAGTAGTCTTAAAAAACTTGGGCTTGTTTTTAGATTTTGACTTAGAATTCAAATGTTTCAAATTTTTCTGGTATATTCTGTATTGTCCTTTCACCTACGGGTTAGGCTGATTAGTTTGATCTCCGAGACAGTAAACTCTATGAAATAAGAGATAAAAACAGAACCTGAATCTTGACCTGCTACCCTGATATAGGCTAAAAAACTTAGCTGGTTAAGCAAGACTTAAGTTTAACCATTTGGTTCGTTAGAACAAATATTGTACCATGTTTAGTTGTAGTTGAGCACCAACAGTGCTCTTCATGGCTTATAGAACGACGTACACAAAAAAGTGTTCTTATTTCGAGTTAGAAATCACTGGTTGATGTGTAGAAAACAGCTGTTTTTCCCCTAATAACATATGTGAGTCCGTTTTTGTTTCTTCTTTGCTGAGCCTAACCTCTCATTTGAGTTGAGGCAATCAATCAATTATGTCTTCAACATGCTCAAAACTCGTTACCTAACAATTTATCATGGAGGTCTCGATATGTCATCTCTTCCATTGTTGATGATTATGATTCATAAGAAATTTGGTTCTGTCATGCACCCCATGCCCTAGCTTGAGCACTCTGCAGTTTGGTTAGTTTATGAGCTAAAAAGAACGTATTATATGCTCAAGAGTGCTTTTGTCATGTTTGAAGCACTTTTGCTAACCAAACAACACTCAATTGCTTTGTGAGAAAATATTTGTGTAGCGTCTAATGCTATGTTCAAATGGGCTTGTTATTAAGCGTTTTTTTTAATCATTATGCATACAATGAAGGGCAAATACTCACAAAGTCACCCTAATTTAGCATACCCTGCAGCTAGGTGGCTTAACGTTTAGCTTGAATATCGAATTCGAAGAAAGTCTATTGACCTTGGAACTTTTTTTTTACTTGATCCAATGCAATTTCATGGGTACATGAAAATGTAATCTGTTTGCAACATGCTTGTTATGATCCTTACGAAATTTGATGGCATTTCAGGTCATCCAGCTCTTATAGGTCGACATCGACCGTTCCCAGTCACGCATAGAGCGGCAGAGAGGTGGTTACATCACATGCAGCTAGCATTAGACGAAACCCCAGATATAGATGCAGATTCAAAAGTCAGAATGACAAACTTTTTCAGG CCGCTCGCTACTGCAAGAGAGAGAAGATGCAGAGTTTGCAAGATAAGGCTTCCGAGTGGAGCGGAGTGAAGCGTGAAGATGCCTTCGCCATCGATGAAGTTAATTTGTTTCAGAAGTTAGGCCTCCAGACGTTCGTCAATCTATCGACCAAATTCTATAACAGGGTGTATGACGACGAGGAGGAGTGGTTCCGATCAATTTTTGGGAATTCGAAGAAAGAGGATGCAATTCAAAACCAGTACGAGTTCTTCGTGCAGAGAATGGGAGGTCATCCAGCTCTTATAGGTCGACATCGACCGTTCCCAGTCACGCATAGAGCGGCAGAGAGGTGGTTACATCACATGCAGCTAGCATTAGACGAAACCCCAGATATAGATGCAGATTCAAAAGTCAGAATGACAAACTTTTTCAGG ATGCAGAGTTTGCAAGATAAGGCTTCCGAGTGGAGCGGAGTGAAGCGTGAAGATGCCTTCGCCATCGATGAAGTTAATTTGTTTCAGAAGTTAGGCCTCCAGACGTTCGTCAATCTATCGACCAAATTCTATAACAGGGTGTATGACGACGAGGAGGAGTGGTTCCGATCAATTTTTGGGAATTCGAAGAAAGAGGATGCAATTCAAAACCAGTACGAGTTCTTCGTGCAGAGAATGGGAGGTCATCCAGCTCTTATAGGTCGACATCGACCGTTCCCAGTCACGCATAGAGCGGCAGAGAGGTGGTTACATCACATGCAGCTAGCATTAGACGAAACCCCAGATATAGATGCAGATTCAAAAGTCAGAATGACAAACTTTTTCAGG MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMGGHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFR Homology
BLAST of Cp4.1LG11g05340 vs. ExPASy Swiss-Prot
Match: Q67XG0 (Two-on-two hemoglobin-3 OS=Arabidopsis thaliana OX=3702 GN=GLB3 PE=1 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 5.8e-54 Identity = 104/138 (75.36%), Postives = 113/138 (81.88%), Query Frame = 0
BLAST of Cp4.1LG11g05340 vs. ExPASy Swiss-Prot
Match: O31607 (Group 2 truncated hemoglobin YjbI OS=Bacillus subtilis (strain 168) OX=224308 GN=yjbI PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.2e-04 Identity = 30/93 (32.26%), Postives = 44/93 (47.31%), Query Frame = 0
BLAST of Cp4.1LG11g05340 vs. NCBI nr
Match: XP_023545796.1 (two-on-two hemoglobin-3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 261 bits (668), Expect = 1.85e-87 Identity = 129/138 (93.48%), Postives = 129/138 (93.48%), Query Frame = 0
BLAST of Cp4.1LG11g05340 vs. NCBI nr
Match: XP_022962612.1 (two-on-two hemoglobin-3 [Cucurbita moschata]) HSP 1 Score: 260 bits (664), Expect = 7.53e-87 Identity = 128/138 (92.75%), Postives = 129/138 (93.48%), Query Frame = 0
BLAST of Cp4.1LG11g05340 vs. NCBI nr
Match: XP_022996482.1 (two-on-two hemoglobin-3 [Cucurbita maxima]) HSP 1 Score: 260 bits (664), Expect = 7.53e-87 Identity = 128/138 (92.75%), Postives = 129/138 (93.48%), Query Frame = 0
BLAST of Cp4.1LG11g05340 vs. NCBI nr
Match: KAG6598792.1 (Two-on-two hemoglobin-3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 259 bits (662), Expect = 1.52e-86 Identity = 128/138 (92.75%), Postives = 128/138 (92.75%), Query Frame = 0
BLAST of Cp4.1LG11g05340 vs. NCBI nr
Match: XP_008445043.1 (PREDICTED: two-on-two hemoglobin-3 isoform X2 [Cucumis melo]) HSP 1 Score: 256 bits (653), Expect = 3.58e-85 Identity = 126/138 (91.30%), Postives = 127/138 (92.03%), Query Frame = 0
BLAST of Cp4.1LG11g05340 vs. ExPASy TrEMBL
Match: A0A6J1K220 (two-on-two hemoglobin-3 OS=Cucurbita maxima OX=3661 GN=LOC111491717 PE=4 SV=1) HSP 1 Score: 260 bits (664), Expect = 3.64e-87 Identity = 128/138 (92.75%), Postives = 129/138 (93.48%), Query Frame = 0
BLAST of Cp4.1LG11g05340 vs. ExPASy TrEMBL
Match: A0A6J1HD51 (two-on-two hemoglobin-3 OS=Cucurbita moschata OX=3662 GN=LOC111463009 PE=4 SV=1) HSP 1 Score: 260 bits (664), Expect = 3.64e-87 Identity = 128/138 (92.75%), Postives = 129/138 (93.48%), Query Frame = 0
BLAST of Cp4.1LG11g05340 vs. ExPASy TrEMBL
Match: A0A1S3BCI0 (two-on-two hemoglobin-3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488203 PE=4 SV=1) HSP 1 Score: 256 bits (653), Expect = 1.73e-85 Identity = 126/138 (91.30%), Postives = 127/138 (92.03%), Query Frame = 0
BLAST of Cp4.1LG11g05340 vs. ExPASy TrEMBL
Match: A0A5A7VA21 (Two-on-two hemoglobin-3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003480 PE=4 SV=1) HSP 1 Score: 255 bits (652), Expect = 2.46e-85 Identity = 126/138 (91.30%), Postives = 127/138 (92.03%), Query Frame = 0
BLAST of Cp4.1LG11g05340 vs. ExPASy TrEMBL
Match: A0A1S3BBR6 (two-on-two hemoglobin-3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488203 PE=4 SV=1) HSP 1 Score: 256 bits (653), Expect = 5.46e-85 Identity = 126/138 (91.30%), Postives = 127/138 (92.03%), Query Frame = 0
BLAST of Cp4.1LG11g05340 vs. TAIR 10
Match: AT4G32690.1 (hemoglobin 3 ) HSP 1 Score: 211.5 bits (537), Expect = 4.1e-55 Identity = 104/138 (75.36%), Postives = 113/138 (81.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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