Cp4.1LG11g04960 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAGGCGGCGCCGATGATTAGGAGACGAAACCAAATTTGATTGGATGTCTTCCAATTAAAAAAATGAAAAGGGAGCAAATAAATTAACCATGTTCTTTGAACAGAATCGATCTATTCAACTGCGCTGAATTTTTCGATTCGGTTTCCGACGACGATAATGGGAATTCCATCGGATTTGAGAGATCTATGGGTGGAAAGAAGGAATGCTCTTGTAATTCCATCGCCGGCTGAAGAACGGAAAATATCGAACGCGAAGCGTTGTACTCAAGGTCTGTTACTGCGCTCTCGATTCCTTGATCCTTCGTTTCTTTGATTTTCACGTCCTTTAAGCTTTGTGGAGTTGGTTGAAATTTAGGATTCTTATTAAAAACAATGGAATCTCGATGTTAACGCAATGGATTTGATCTTCTTTAGCTGCTGTACTAATTGTCACTGGATAATTTGTAGGGAAAATGTGAAAATATCTGCCTCCATGTTTTGTTTCATTATGATGAGAATTGTTTTCTCTCACTTCTTTCTTTTTTTGGAGCTGGAGATGCAAGTGCGATCAATGTTTTGTTTTCTTTTTAAGTCAATGCTTTTAGATTTTGCTTATTTACAAGTTTTATTTGATTATTAATCGCATCATATCTTGTTCATAACATCAGCTAGCCTTTGTATACTTTTCAGAAGGTGTTCGTGCTGGTTTCAAGAATGCTTCTATTGCATGTGTGGCCAGTGCAGTGCCTACGGTATTCGTTCTGACATAATAAGCTTTGGGTTTAATCTGTTTTGATGTCGGTATTTGTAGTTTAAAACAGCATAAATTTGACCATATTAGTAGGTTGCACATTAACAAAAGGCATAAAGCTCATCAATAGCTTAAAGCTTTCTTCCAATTACATTGTGTTGGTTTGAGTTATGTCTTCGTAGTATAGGCACTCTATTTTGGCCCATTCCATGTAATTACTTGCCTGCACTTGTTCTATAGATACATATATTTCGTCTTCTCCCGAATCGGTCAGTCTAAACTGCCAGTGCAGATAATCGAACATGTTAATGGTTACCAGACAAAAAGTTGAAAGGATTTAAGAGTAGACTATCTGATTCTTTCATCATGTTTGTGAAAGAAAAGACAGACAGAAGTAGAATATGATTGTTGATCTCCATATGGTAGATATAGTAAGAAAAACACTATTATTTCGGTGCTGGTGGGTTGAAGAAAATTATTTGGTTTTATTTCTTTAAGGATATCTTCTTTGGAAATCAAATTTAGAGTTTATTGGGGCTTGATTCTTTTGTAATAACAGCTTTCCCCCCTTGTTTATTTGAACAGGCAAACCATTTGCTACATAAAATGCAGAGTATCAATACCACCTTATTAGTCCCTTGTGCTATTTTGCGGTAGTGGTAATGCCTAGGAAATTGCAGAATTTAAGTAGGGAGAAAATTTTGGAAAATCACCTTTGTGTGGTTGATGAGGTCGTAAGTGTTTAAGAGAAATCTATTAGGAAGTGAAGATTTAGACTGAATTTTGATAAGAGAAATCTCGTCTTCATTTTCGGGCATTATAGAGGAATAGCTATAAAAAACTATATTAAAGGAAACACAACTTCTTCGATGAGGTTTGTTGAAAGGTGGAATTCCACCGATATAAAAAATTAAATACTGGTCTGGGTTAACAAGCTTCAACTAGTCTGATACCAACTGCAACAAAGACCCCATACTTACAACCATTTGAAGTACTGTGTGGGGCATTTCCTGAGCAAGTCTTAGCTAAATTGAGTCTTATTCTCACAGCATTTGGGATGTGTGTGTGTCTTTGTGTGTGTGAATTTATGTTTTTAGTTTAATATACTTCTTCTCCTCCATCCTCAGTTGGTTGCTGTTCGAGTAGTTCCTTGGGCCAAAGCAAACCTTAATTATACTGCTCAGGCACTCATCATTTCTGCAGGTATAGTGCTTATGTACAAACTTGTTATTAACCAATTGTCATCATCTATTTCAAACACAGAAAAGCCTAAAGAGTTAAATCTGTGAACTCCTAGTAAGTATGAGCCCATTCCATTTTTCTGCCCCCTACGAAAGTAAAAGAAAATGCTAAAAACTATTATGGAAGCATCTTTAGAAACGGGTCGAATTAACTTGGTATTACTTATTGTAGGAATTAACGTTTTACTTTTAATTTGTGAACAGCGTCTATTGCTGCGTACTTCATCACTGCTGATAAAACCATCTTAGAATGTGCAAGAAGAAACTCTCAGTTAGAGCATGCCTTGAGGCGCCAAGGATCATGAATGTACTTTTGTGTGCGTTGTGTTGGAGCAGTCTGTTCGGATGTTATATAACGGAAAATGGCTCCAAAATGCCTAATGACAGTTTAAGATCTAGTCCTTCACTTGTTTTCTTCCCAATTTCCAATACCAACTCTCTTTGGATTCAGTGGACTAGATGTAAAACAAACAATAAAATAAAATATCTCCTTCTAGTGCCGGCTACCATTATGGGCGCTTATATTTTCTGCTGTTTCTGATTTTGGAATGCAAGTAGTGTTTATGTGGCCATTTACTCTGTTTCCGTTCATTCTTCTTGAATTTTGTTTACCTCATGTGAAATACTATTCTCAAGCTTCCTGGAGATTGTTTATCTTCTTTTGGTTGCATGAAGTTTCTGGATTAAAAACCTGAAATACTAGTGTCAATGAAGTTCTTCGCCAATGATTGCTGATAGCATGATATCTTTTGGATTAAAATTTAATCTTTAGATTTAAGGTACATTATCACCCTGCTATGGATTTGATTTACATTCAGTATATCCTAGTTTATTTTCTTTAGAAGGGTTTTATGCCAGCTTCAAAGGATTGCATTTGGTTCTTGACATGAATCTGAGCCTTCTAGTTTGGATTCATGTAAAGAGAGGTGCAATGGACTGGCTGGATTCTACAAGATACTTCAGATAGTAGACAATGTTATCCAGCTTTCCCATGAGTATTCCAACTGTGGTCAACTTCACTCCTTGGTTCATAATATTAGG ACAGGCGGCGCCGATGATTAGGAGACGAAACCAAATTTGATTGGATGTCTTCCAATTAAAAAAATGAAAAGGGAGCAAATAAATTAACCATGTTCTTTGAACAGAATCGATCTATTCAACTGCGCTGAATTTTTCGATTCGGTTTCCGACGACGATAATGGGAATTCCATCGGATTTGAGAGATCTATGGGTGGAAAGAAGGAATGCTCTTGTAATTCCATCGCCGGCTGAAGAACGGAAAATATCGAACGCGAAGCGTTGTACTCAAGAAGGTGTTCGTGCTGGTTTCAAGAATGCTTCTATTGCATGTGTGGCCAGTGCAGTGCCTACGTTGGTTGCTGTTCGAGTAGTTCCTTGGGCCAAAGCAAACCTTAATTATACTGCTCAGGCACTCATCATTTCTGCAGCGTCTATTGCTGCGTACTTCATCACTGCTGATAAAACCATCTTAGAATGTGCAAGAAGAAACTCTCAGTTAGAGCATGCCTTGAGGCGCCAAGGATCATGAATGTACTTTTGTGTGCGTTGTGTTGGAGCAGTCTGTTCGGATGTTATATAACGGAAAATGGCTCCAAAATGCCTAATGACAGTTTAAGATCTAGTCCTTCACTTGTTTTCTTCCCAATTTCCAATACCAACTCTCTTTGGATTCAGTGGACTAGATGTAAAACAAACAATAAAATAAAATATCTCCTTCTAGTGCCGGCTACCATTATGGGCGCTTATATTTTCTGCTGTTTCTGATTTTGGAATGCAAGTAGTGTTTATGTGGCCATTTACTCTGTTTCCGTTCATTCTTCTTGAATTTTGTTTACCTCATGTGAAATACTATTCTCAAGCTTCCTGGAGATTGTTTATCTTCTTTTGGTTGCATGAAGTTTCTGGATTAAAAACCTGAAATACTAGTGTCAATGAAGTTCTTCGCCAATGATTGCTGATAGCATGATATCTTTTGGATTAAAATTTAATCTTTAGATTTAAGGTACATTATCACCCTGCTATGGATTTGATTTACATTCAGTATATCCTAGTTTATTTTCTTTAGAAGGGTTTTATGCCAGCTTCAAAGGATTGCATTTGGTTCTTGACATGAATCTGAGCCTTCTAGTTTGGATTCATGTAAAGAGAGGTGCAATGGACTGGCTGGATTCTACAAGATACTTCAGATAGTAGACAATGTTATCCAGCTTTCCCATGAGTATTCCAACTGTGGTCAACTTCACTCCTTGGTTCATAATATTAGG ATGGGAATTCCATCGGATTTGAGAGATCTATGGGTGGAAAGAAGGAATGCTCTTGTAATTCCATCGCCGGCTGAAGAACGGAAAATATCGAACGCGAAGCGTTGTACTCAAGAAGGTGTTCGTGCTGGTTTCAAGAATGCTTCTATTGCATGTGTGGCCAGTGCAGTGCCTACGTTGGTTGCTGTTCGAGTAGTTCCTTGGGCCAAAGCAAACCTTAATTATACTGCTCAGGCACTCATCATTTCTGCAGCGTCTATTGCTGCGTACTTCATCACTGCTGATAAAACCATCTTAGAATGTGCAAGAAGAAACTCTCAGTTAGAGCATGCCTTGAGGCGCCAAGGATCATGA MGIPSDLRDLWVERRNALVIPSPAEERKISNAKRCTQEGVRAGFKNASIACVASAVPTLVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEHALRRQGS Homology
BLAST of Cp4.1LG11g04960 vs. ExPASy Swiss-Prot
Match: Q02921 (Early nodulin-93 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 9.9e-21 Identity = 52/80 (65.00%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of Cp4.1LG11g04960 vs. NCBI nr
Match: XP_023546668.1 (early nodulin-93-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 221 bits (562), Expect = 2.69e-72 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g04960 vs. NCBI nr
Match: XP_022996859.1 (early nodulin-93-like [Cucurbita maxima] >KAG6598764.1 hypothetical protein SDJN03_08542, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 218 bits (555), Expect = 3.14e-71 Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 0
BLAST of Cp4.1LG11g04960 vs. NCBI nr
Match: XP_022961692.1 (early nodulin-93-like [Cucurbita moschata]) HSP 1 Score: 215 bits (548), Expect = 3.68e-70 Identity = 114/116 (98.28%), Postives = 114/116 (98.28%), Query Frame = 0
BLAST of Cp4.1LG11g04960 vs. NCBI nr
Match: KAG7029704.1 (hypothetical protein SDJN02_08046 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 214 bits (545), Expect = 1.05e-69 Identity = 114/116 (98.28%), Postives = 114/116 (98.28%), Query Frame = 0
BLAST of Cp4.1LG11g04960 vs. NCBI nr
Match: XP_038886799.1 (early nodulin-93-like [Benincasa hispida]) HSP 1 Score: 209 bits (531), Expect = 1.44e-67 Identity = 110/115 (95.65%), Postives = 112/115 (97.39%), Query Frame = 0
BLAST of Cp4.1LG11g04960 vs. ExPASy TrEMBL
Match: A0A6J1K9V4 (early nodulin-93-like OS=Cucurbita maxima OX=3661 GN=LOC111491977 PE=4 SV=1) HSP 1 Score: 218 bits (555), Expect = 1.52e-71 Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 0
BLAST of Cp4.1LG11g04960 vs. ExPASy TrEMBL
Match: A0A6J1HAU7 (early nodulin-93-like OS=Cucurbita moschata OX=3662 GN=LOC111462385 PE=4 SV=1) HSP 1 Score: 215 bits (548), Expect = 1.78e-70 Identity = 114/116 (98.28%), Postives = 114/116 (98.28%), Query Frame = 0
BLAST of Cp4.1LG11g04960 vs. ExPASy TrEMBL
Match: A0A1S4DVR9 (early nodulin-93-like OS=Cucumis melo OX=3656 GN=LOC103488164 PE=4 SV=1) HSP 1 Score: 207 bits (526), Expect = 4.03e-67 Identity = 108/116 (93.10%), Postives = 113/116 (97.41%), Query Frame = 0
BLAST of Cp4.1LG11g04960 vs. ExPASy TrEMBL
Match: A0A0A0LPQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372870 PE=4 SV=1) HSP 1 Score: 206 bits (525), Expect = 5.73e-67 Identity = 108/116 (93.10%), Postives = 112/116 (96.55%), Query Frame = 0
BLAST of Cp4.1LG11g04960 vs. ExPASy TrEMBL
Match: A0A6J1BRP8 (early nodulin-93-like OS=Momordica charantia OX=3673 GN=LOC111005097 PE=4 SV=1) HSP 1 Score: 197 bits (502), Expect = 1.79e-63 Identity = 103/115 (89.57%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of Cp4.1LG11g04960 vs. TAIR 10
Match: AT5G25940.1 (early nodulin-related ) HSP 1 Score: 109.4 bits (272), Expect = 2.0e-24 Identity = 60/95 (63.16%), Postives = 74/95 (77.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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