Cp4.1LG11g04910 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g04910
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Auxin-responsive protein
Location	Cp4.1LG11: 2872806 .. 2874273 (+)
RNA-Seq Expression	Cp4.1LG11g04910
Synteny	Cp4.1LG11g04910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTCATCTTACTTTTCTTGTGTTGTTTATTCCTATTTGTATCTTCTTTGAGCTTAGGGAGTTTTTGAATGAATGAATCAATGAATGGATGAATCTTCTAGTTTGCCAGCTGAGAAAATTCGAGAAGCTGGAGGTAATTTGTTTATGAACTTGCATTGTTTTGCGGCGTTGTTTTGACTTGCTCCATTGAATCTTCTTCTTCTTACCTTTTTCACTTTGCTTTTATCTGAAGAATTTTNTTTTTTTTTTTTCTTTTTCTTTTTCTTTTTCCTTTCTGGAGTTCTATTTTAATTTGTTGTGTGTGTGTGTGGGTGTTTTCAGTGGCTCCCTAATTCTTTTCAGTTATGCAAATAATTCAGGTTTTTGCAGTTTGATTTGAGTCTCAAATGTTGTTATTTGTGAAGTTCTGATACGTTTCAGTGTACTGAGCGCAATGCTTTGTAGACTGTTCTTTTCTAGTTATTCTGGAGAAGTATCTTTGGGTTAATGAAGATGAAAAATTCCATTTTTCTCCCCTCTTTCTCGCGTTGTTTTTCCTTGTGGGTGCAATCTTCTTGGACGGATGGAAGAAAGTAATTGATGAACTTGTAGATACTTAGGATGGCTTTAGTGCCTTATAGTGTAGTAAGCTGGATGAATTACAAAGTAGACAGAACAGAAGGGTGTATGCAGTCTGGCTCTCTGATGGAAATTGGAAAATTCATAGTGTTCTGTTTTATGCAGGTATAAGATCGGGGTGTTTTCTTTCTGGAATTTTGATGTCTCCACCACTACTTAATGTTGAGGAGGGGGAGGAAAGTCGCAGCAATGTCACTCTGTTGGCTTCCCCGAGCTCTATGGAGAGTGTCAGTCAAAACAATTTGGGATTTGAAGAGCGTAATTACATGGGATTATCTGTTTCTTCTTCAGAGGAAAGCTGTATGACTGCCACAAAGCCTAATGGGAACAATCACTTGCTGAATCTCAAGGCTACGGAATTGAGGCTAGGCATTCCTGGATCTGAATCCCCCGAGAGAGATCCAGATATCAGCTTTCGTAGTTCTTCTCAACTTGATGAAAAAACACTATTTCCTTTGCACCCATCAGGTGATGGTCGCTACTCTTCACCACATAAGGCTGTGGTCTCAGGCAACAAAAGGGGGTTTTCAGATGCTATGAACGAATTCTCAGAGGTGAAATTGCCTATGTTTTGTTTTGTTTTTATTTTTGGACAGACTTGCAGTAGTATTCAGTGTCTGGTCTCGAGTCTCGACTCTGAAGCCATTTAAATCTGGTGCAGGGAAAATATAACGCTAACATAGGCTTGAAAGCTGGTTCTTTGCTAGAGAACCTTGGAAGTGAAATGGGGAAATTGAAAGAGGCAACTACACAAAAGGCTGTACAAGAGAGGTCTCTAGAAAATAGTGAAACTAGGCCATCTCAAAGCGAGGCTGCAAATAACAACACCAGCGCACCTGTTTCTAAGTAA

mRNA sequence

TGTTCATCTTACTTTTCTTGTGTTGTTTATTCCTATTTGTATCTTCTTTGAGCTTAGGGAGTTTTTGAATGAATGAATCAATGAATGGATGAATCTTCTAGTTTGCCAGCTGAGAAAATTCGAGAAGCTGGAGGTATAAGATCGGGGTGTTTTCTTTCTGGAATTTTGATGTCTCCACCACTACTTAATGTTGAGGAGGGGGAGGAAAGTCGCAGCAATGTCACTCTGTTGGCTTCCCCGAGCTCTATGGAGAGTGTCAGTCAAAACAATTTGGGATTTGAAGAGCGTAATTACATGGGATTATCTGTTTCTTCTTCAGAGGAAAGCTGTATGACTGCCACAAAGCCTAATGGGAACAATCACTTGCTGAATCTCAAGGCTACGGAATTGAGGCTAGGCATTCCTGGATCTGAATCCCCCGAGAGAGATCCAGATATCAGCTTTCGTAGTTCTTCTCAACTTGATGAAAAAACACTATTTCCTTTGCACCCATCAGGTGATGGTCGCTACTCTTCACCACATAAGGCTGTGGTCTCAGGCAACAAAAGGGGGTTTTCAGATGCTATGAACGAATTCTCAGAGGGAAAATATAACGCTAACATAGGCTTGAAAGCTGGTTCTTTGCTAGAGAACCTTGGAAGTGAAATGGGGAAATTGAAAGAGGCAACTACACAAAAGGCTGTACAAGAGAGGTCTCTAGAAAATAGTGAAACTAGGCCATCTCAAAGCGAGGCTGCAAATAACAACACCAGCGCACCTGTTTCTAAGTAA

Coding sequence (CDS)

ATGGATGAATCTTCTAGTTTGCCAGCTGAGAAAATTCGAGAAGCTGGAGGTATAAGATCGGGGTGTTTTCTTTCTGGAATTTTGATGTCTCCACCACTACTTAATGTTGAGGAGGGGGAGGAAAGTCGCAGCAATGTCACTCTGTTGGCTTCCCCGAGCTCTATGGAGAGTGTCAGTCAAAACAATTTGGGATTTGAAGAGCGTAATTACATGGGATTATCTGTTTCTTCTTCAGAGGAAAGCTGTATGACTGCCACAAAGCCTAATGGGAACAATCACTTGCTGAATCTCAAGGCTACGGAATTGAGGCTAGGCATTCCTGGATCTGAATCCCCCGAGAGAGATCCAGATATCAGCTTTCGTAGTTCTTCTCAACTTGATGAAAAAACACTATTTCCTTTGCACCCATCAGGTGATGGTCGCTACTCTTCACCACATAAGGCTGTGGTCTCAGGCAACAAAAGGGGGTTTTCAGATGCTATGAACGAATTCTCAGAGGGAAAATATAACGCTAACATAGGCTTGAAAGCTGGTTCTTTGCTAGAGAACCTTGGAAGTGAAATGGGGAAATTGAAAGAGGCAACTACACAAAAGGCTGTACAAGAGAGGTCTCTAGAAAATAGTGAAACTAGGCCATCTCAAAGCGAGGCTGCAAATAACAACACCAGCGCACCTGTTTCTAAGTAA

Protein sequence

MDESSSLPAEKIREAGGIRSGCFLSGILMSPPLLNVEEGEESRSNVTLLASPSSMESVSQNNLGFEERNYMGLSVSSSEESCMTATKPNGNNHLLNLKATELRLGIPGSESPERDPDISFRSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIGLKAGSLLENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAANNNTSAPVSK

Homology

[Close]

BLAST of Cp4.1LG11g04910 vs. ExPASy Swiss-Prot
Match: Q38827 (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.9e-21
Identity = 71/190 (37.37%), Postives = 106/190 (55.79%), Query Frame = 0


Query: 40  EESRSNVTLLASPSSMESVSQNNL-GFEERNYMGLSVSSSEESCMTATKPNGNNHLLNLK 99
           EE +SNV++ +S  +   +S+N L G +E NY+GLS  SS  S   +     +   ++LK
Sbjct: 5   EELQSNVSVASSSPTSNCISRNTLGGLKEHNYLGLSDCSSVGSSTLSPLAEDDKATISLK 64

Query: 100 ATELRLGIPGSESPERDPDISFRSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFS 159
           ATEL LG+PGS+SP RD +++  S ++LDEK  FPL PS D   SS  K   SGNKRGFS
Sbjct: 65  ATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFS 124

Query: 160 DAMNEFSEGKYNANIGLKAGSLLENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAA 219
           D M++F+E K +                +     EA   ++V ++ +  +  +  QS   
Sbjct: 125 DTMDQFAEAKSSV------------YTEKNWMFPEAAATQSVTKKDVPQNIPK-GQSSTT 181

Query: 220 NNNTSAPVSK 229
           NN++S P +K
Sbjct: 185 NNSSSPPAAK 181

[Close]

BLAST of Cp4.1LG11g04910 vs. ExPASy Swiss-Prot
Match: Q38826 (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.1e-18
Identity = 60/112 (53.57%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 66  EERNYMGLSVSSSEESCMTATKPN--GNNHLLNLKATELRLGIPGSESPERDPDISFRSS 125
           +ERNY+GLS  SS +S   +T PN  G ++ LN KATELRLG+P S+SPER+ D    S 
Sbjct: 20  KERNYLGLSDCSSVDS---STIPNVVGKSN-LNFKATELRLGLPESQSPERETDFGLLSP 79

Query: 126 SQLDEKTLFPLHPSGD-GRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIG 175
              DEK LFPL PS D G  ++ HK VVSGNKRGF+D  +EFS  K +   G
Sbjct: 80  RTPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSGVKGSVRPG 127

[Close]

BLAST of Cp4.1LG11g04910 vs. ExPASy Swiss-Prot
Match: Q9ZSY8 (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.4e-07
Identity = 50/155 (32.26%), Postives = 75/155 (48.39%), Query Frame = 0


Query: 67  ERNYMGLSVSSSEESCMTA--TKPNGNNHLLNLKATELRLGIPGSESPERDPDISFRSSS 126
           E +Y+GLS   + E+   +  TK   NN+ LN KATELRLG+PGSESPER          
Sbjct: 8   EHDYIGLSEFPTMEATTMSDKTKTRDNNNGLNFKATELRLGLPGSESPER---------- 67

Query: 127 QLDEKTLFPLHPSGDGRYSSPHKA--VVSGNKRGFSDAMNEFSEGKYNANIGLKAGSLLE 186
                         D R+ + +K+   VSG KR FSDA+N+ ++  ++       G +  
Sbjct: 68  -------------VDSRFLALNKSSCPVSGAKRVFSDAINDSNKWVFSPGSTTATGDVGS 127

Query: 187 NLGSEMGKLKEAT----TQKAVQERSLENSETRPS 214
             G     +K+      T+ AV  +  ++S T P+
Sbjct: 128 GSGPRTSVVKDGKSTTFTKPAVPVKEKKSSATAPA 139

[Close]

BLAST of Cp4.1LG11g04910 vs. NCBI nr
Match: XP_023546195.1 (auxin-responsive protein IAA8-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 436 bits (1122), Expect = 1.28e-151
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MDESSSLPAEKIREAGGIRSGCFLSGILMSPPLLNVEEGEESRSNVTLLASPSSMESVSQ 60
           MDESSSLPAEKIREAGGIRSGCFLSGILMSPPLLNVEEGEESRSNVTLLASPSSMESVSQ
Sbjct: 1   MDESSSLPAEKIREAGGIRSGCFLSGILMSPPLLNVEEGEESRSNVTLLASPSSMESVSQ 60

Query: 61  NNLGFEERNYMGLSVSSSEESCMTATKPNGNNHLLNLKATELRLGIPGSESPERDPDISF 120
           NNLGFEERNYMGLSVSSSEESCMTATKPNGNNHLLNLKATELRLGIPGSESPERDPDISF
Sbjct: 61  NNLGFEERNYMGLSVSSSEESCMTATKPNGNNHLLNLKATELRLGIPGSESPERDPDISF 120

Query: 121 RSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIGLKAGSL 180
           RSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIGLKAGSL
Sbjct: 121 RSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIGLKAGSL 180

Query: 181 LENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAANNNTSAPVSK 228
           LENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAANNNTSAPVSK
Sbjct: 181 LENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAANNNTSAPVSK 228

[Close]

BLAST of Cp4.1LG11g04910 vs. NCBI nr
Match: XP_022961922.1 (auxin-responsive protein IAA8-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 429 bits (1103), Expect = 9.92e-149
Identity = 225/228 (98.68%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 1   MDESSSLPAEKIREAGGIRSGCFLSGILMSPPLLNVEEGEESRSNVTLLASPSSMESVSQ 60
           MDESSSLPAEKIREAGGIRSGCF SGILMSPPLLNVEEGEESRSNVTLLASPSSMESVSQ
Sbjct: 1   MDESSSLPAEKIREAGGIRSGCFPSGILMSPPLLNVEEGEESRSNVTLLASPSSMESVSQ 60

Query: 61  NNLGFEERNYMGLSVSSSEESCMTATKPNGNNHLLNLKATELRLGIPGSESPERDPDISF 120
           NNLGFEERNYMGLSVSSSEESCMTATKPNGN HLLNLKATELRLGIPGSESPERDPDISF
Sbjct: 61  NNLGFEERNYMGLSVSSSEESCMTATKPNGNKHLLNLKATELRLGIPGSESPERDPDISF 120

Query: 121 RSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIGLKAGSL 180
           RSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIGLKA SL
Sbjct: 121 RSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIGLKASSL 180

Query: 181 LENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAANNNTSAPVSK 228
           LENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAANNNTSAPVSK
Sbjct: 181 LENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAANNNTSAPVSK 228

[Close]

BLAST of Cp4.1LG11g04910 vs. NCBI nr
Match: XP_022997180.1 (auxin-responsive protein IAA8-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 414 bits (1065), Expect = 5.95e-143
Identity = 219/228 (96.05%), Postives = 221/228 (96.93%), Query Frame = 0


Query: 1   MDESSSLPAEKIREAGGIRSGCFLSGILMSPPLLNVEEGEESRSNVTLLASPSSMESVSQ 60
           M+ES SLPAEKIREAGGIRSG F SGILMSPPLLNV EGEESRSNVTLLAS SSMESVSQ
Sbjct: 1   MNESPSLPAEKIREAGGIRSGLFHSGILMSPPLLNVGEGEESRSNVTLLASSSSMESVSQ 60

Query: 61  NNLGFEERNYMGLSVSSSEESCMTATKPNGNNHLLNLKATELRLGIPGSESPERDPDISF 120
           NNLGFEERNYMGLSVSSSEESCMTATKPNGN HLLNLKATELRLGIPGSESPERDPDI F
Sbjct: 61  NNLGFEERNYMGLSVSSSEESCMTATKPNGNKHLLNLKATELRLGIPGSESPERDPDIGF 120

Query: 121 RSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIGLKAGSL 180
           RSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFSDAM+EFSEGKYNANIGLKAGSL
Sbjct: 121 RSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFSDAMDEFSEGKYNANIGLKAGSL 180

Query: 181 LENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAANNNTSAPVSK 228
           LENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAANNNTSAPVSK
Sbjct: 181 LENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAANNNTSAPVSK 228

[Close]

BLAST of Cp4.1LG11g04910 vs. NCBI nr
Match: KAG6598749.1 (Auxin-responsive protein IAA8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 399 bits (1024), Expect = 1.25e-136
Identity = 208/212 (98.11%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 17  GIRSGCFLSGILMSPPLLNVEEGEESRSNVTLLASPSSMESVSQNNLGFEERNYMGLSVS 76
           GIRSGCFLSGILMSPPLLNVEEGEESRSNVTLL SPSSMESVSQNNLGFEERNYMGLSVS
Sbjct: 23  GIRSGCFLSGILMSPPLLNVEEGEESRSNVTLLPSPSSMESVSQNNLGFEERNYMGLSVS 82

Query: 77  SSEESCMTATKPNGNNHLLNLKATELRLGIPGSESPERDPDISFRSSSQLDEKTLFPLHP 136
           SSEESCMTATKPNGN HLLNLKATELRLGIPGSESPERDPDISFRSSSQLDEKTLFPLHP
Sbjct: 83  SSEESCMTATKPNGNKHLLNLKATELRLGIPGSESPERDPDISFRSSSQLDEKTLFPLHP 142

Query: 137 SGDGRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIGLKAGSLLENLGSEMGKLKEATT 196
           SGDGRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIGLKAGSLLENLGSEMGKLKEATT
Sbjct: 143 SGDGRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIGLKAGSLLENLGSEMGKLKEATT 202

Query: 197 QKAVQERSLENSETRPSQSEAANNNTSAPVSK 228
           QKAVQERSLENSE RPSQSEAANNNT+APVSK
Sbjct: 203 QKAVQERSLENSEIRPSQSEAANNNTNAPVSK 234

[Close]

BLAST of Cp4.1LG11g04910 vs. NCBI nr
Match: XP_023546196.1 (auxin-responsive protein IAA8-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 382 bits (981), Expect = 1.35e-130
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 29  MSPPLLNVEEGEESRSNVTLLASPSSMESVSQNNLGFEERNYMGLSVSSSEESCMTATKP 88
           MSPPLLNVEEGEESRSNVTLLASPSSMESVSQNNLGFEERNYMGLSVSSSEESCMTATKP
Sbjct: 1   MSPPLLNVEEGEESRSNVTLLASPSSMESVSQNNLGFEERNYMGLSVSSSEESCMTATKP 60

Query: 89  NGNNHLLNLKATELRLGIPGSESPERDPDISFRSSSQLDEKTLFPLHPSGDGRYSSPHKA 148
           NGNNHLLNLKATELRLGIPGSESPERDPDISFRSSSQLDEKTLFPLHPSGDGRYSSPHKA
Sbjct: 61  NGNNHLLNLKATELRLGIPGSESPERDPDISFRSSSQLDEKTLFPLHPSGDGRYSSPHKA 120

Query: 149 VVSGNKRGFSDAMNEFSEGKYNANIGLKAGSLLENLGSEMGKLKEATTQKAVQERSLENS 208
           VVSGNKRGFSDAMNEFSEGKYNANIGLKAGSLLENLGSEMGKLKEATTQKAVQERSLENS
Sbjct: 121 VVSGNKRGFSDAMNEFSEGKYNANIGLKAGSLLENLGSEMGKLKEATTQKAVQERSLENS 180

Query: 209 ETRPSQSEAANNNTSAPVSK 228
           ETRPSQSEAANNNTSAPVSK
Sbjct: 181 ETRPSQSEAANNNTSAPVSK 200

[Close]

BLAST of Cp4.1LG11g04910 vs. ExPASy TrEMBL
Match: A0A6J1HBE4 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462547 PE=3 SV=1)

HSP 1 Score: 429 bits (1103), Expect = 4.80e-149
Identity = 225/228 (98.68%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 1   MDESSSLPAEKIREAGGIRSGCFLSGILMSPPLLNVEEGEESRSNVTLLASPSSMESVSQ 60
           MDESSSLPAEKIREAGGIRSGCF SGILMSPPLLNVEEGEESRSNVTLLASPSSMESVSQ
Sbjct: 1   MDESSSLPAEKIREAGGIRSGCFPSGILMSPPLLNVEEGEESRSNVTLLASPSSMESVSQ 60

Query: 61  NNLGFEERNYMGLSVSSSEESCMTATKPNGNNHLLNLKATELRLGIPGSESPERDPDISF 120
           NNLGFEERNYMGLSVSSSEESCMTATKPNGN HLLNLKATELRLGIPGSESPERDPDISF
Sbjct: 61  NNLGFEERNYMGLSVSSSEESCMTATKPNGNKHLLNLKATELRLGIPGSESPERDPDISF 120

Query: 121 RSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIGLKAGSL 180
           RSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIGLKA SL
Sbjct: 121 RSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIGLKASSL 180

Query: 181 LENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAANNNTSAPVSK 228
           LENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAANNNTSAPVSK
Sbjct: 181 LENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAANNNTSAPVSK 228

[Close]

BLAST of Cp4.1LG11g04910 vs. ExPASy TrEMBL
Match: A0A6J1K8V2 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492157 PE=3 SV=1)

HSP 1 Score: 414 bits (1065), Expect = 2.88e-143
Identity = 219/228 (96.05%), Postives = 221/228 (96.93%), Query Frame = 0


Query: 1   MDESSSLPAEKIREAGGIRSGCFLSGILMSPPLLNVEEGEESRSNVTLLASPSSMESVSQ 60
           M+ES SLPAEKIREAGGIRSG F SGILMSPPLLNV EGEESRSNVTLLAS SSMESVSQ
Sbjct: 1   MNESPSLPAEKIREAGGIRSGLFHSGILMSPPLLNVGEGEESRSNVTLLASSSSMESVSQ 60

Query: 61  NNLGFEERNYMGLSVSSSEESCMTATKPNGNNHLLNLKATELRLGIPGSESPERDPDISF 120
           NNLGFEERNYMGLSVSSSEESCMTATKPNGN HLLNLKATELRLGIPGSESPERDPDI F
Sbjct: 61  NNLGFEERNYMGLSVSSSEESCMTATKPNGNKHLLNLKATELRLGIPGSESPERDPDIGF 120

Query: 121 RSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIGLKAGSL 180
           RSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFSDAM+EFSEGKYNANIGLKAGSL
Sbjct: 121 RSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFSDAMDEFSEGKYNANIGLKAGSL 180

Query: 181 LENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAANNNTSAPVSK 228
           LENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAANNNTSAPVSK
Sbjct: 181 LENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAANNNTSAPVSK 228

[Close]

BLAST of Cp4.1LG11g04910 vs. ExPASy TrEMBL
Match: A0A6J1HD78 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462547 PE=3 SV=1)

HSP 1 Score: 377 bits (969), Expect = 4.35e-129
Identity = 198/200 (99.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 29  MSPPLLNVEEGEESRSNVTLLASPSSMESVSQNNLGFEERNYMGLSVSSSEESCMTATKP 88
           MSPPLLNVEEGEESRSNVTLLASPSSMESVSQNNLGFEERNYMGLSVSSSEESCMTATKP
Sbjct: 1   MSPPLLNVEEGEESRSNVTLLASPSSMESVSQNNLGFEERNYMGLSVSSSEESCMTATKP 60

Query: 89  NGNNHLLNLKATELRLGIPGSESPERDPDISFRSSSQLDEKTLFPLHPSGDGRYSSPHKA 148
           NGN HLLNLKATELRLGIPGSESPERDPDISFRSSSQLDEKTLFPLHPSGDGRYSSPHKA
Sbjct: 61  NGNKHLLNLKATELRLGIPGSESPERDPDISFRSSSQLDEKTLFPLHPSGDGRYSSPHKA 120

Query: 149 VVSGNKRGFSDAMNEFSEGKYNANIGLKAGSLLENLGSEMGKLKEATTQKAVQERSLENS 208
           VVSGNKRGFSDAMNEFSEGKYNANIGLKA SLLENLGSEMGKLKEATTQKAVQERSLENS
Sbjct: 121 VVSGNKRGFSDAMNEFSEGKYNANIGLKASSLLENLGSEMGKLKEATTQKAVQERSLENS 180

Query: 209 ETRPSQSEAANNNTSAPVSK 228
           ETRPSQSEAANNNTSAPVSK
Sbjct: 181 ETRPSQSEAANNNTSAPVSK 200

[Close]

BLAST of Cp4.1LG11g04910 vs. ExPASy TrEMBL
Match: A0A6J1K6S8 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492157 PE=3 SV=1)

HSP 1 Score: 370 bits (951), Expect = 2.37e-126
Identity = 195/200 (97.50%), Postives = 196/200 (98.00%), Query Frame = 0


Query: 29  MSPPLLNVEEGEESRSNVTLLASPSSMESVSQNNLGFEERNYMGLSVSSSEESCMTATKP 88
           MSPPLLNV EGEESRSNVTLLAS SSMESVSQNNLGFEERNYMGLSVSSSEESCMTATKP
Sbjct: 1   MSPPLLNVGEGEESRSNVTLLASSSSMESVSQNNLGFEERNYMGLSVSSSEESCMTATKP 60

Query: 89  NGNNHLLNLKATELRLGIPGSESPERDPDISFRSSSQLDEKTLFPLHPSGDGRYSSPHKA 148
           NGN HLLNLKATELRLGIPGSESPERDPDI FRSSSQLDEKTLFPLHPSGDGRYSSPHKA
Sbjct: 61  NGNKHLLNLKATELRLGIPGSESPERDPDIGFRSSSQLDEKTLFPLHPSGDGRYSSPHKA 120

Query: 149 VVSGNKRGFSDAMNEFSEGKYNANIGLKAGSLLENLGSEMGKLKEATTQKAVQERSLENS 208
           VVSGNKRGFSDAM+EFSEGKYNANIGLKAGSLLENLGSEMGKLKEATTQKAVQERSLENS
Sbjct: 121 VVSGNKRGFSDAMDEFSEGKYNANIGLKAGSLLENLGSEMGKLKEATTQKAVQERSLENS 180

Query: 209 ETRPSQSEAANNNTSAPVSK 228
           ETRPSQSEAANNNTSAPVSK
Sbjct: 181 ETRPSQSEAANNNTSAPVSK 200

[Close]

BLAST of Cp4.1LG11g04910 vs. ExPASy TrEMBL
Match: A0A6J1KMY6 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111496059 PE=3 SV=1)

HSP 1 Score: 311 bits (798), Expect = 3.99e-103
Identity = 165/200 (82.50%), Postives = 180/200 (90.00%), Query Frame = 0


Query: 29  MSPPLLNVEEGEESRSNVTLLASPSSMESVSQNNLGFEERNYMGLSVSSSEESCMTATKP 88
           MSPP L+V EGEE RSNVTLLAS +SMESVSQNNLGFEERNYMGLS SSSE+SCMTATK 
Sbjct: 1   MSPPPLDVGEGEECRSNVTLLASSNSMESVSQNNLGFEERNYMGLSDSSSEDSCMTATKS 60

Query: 89  NGNNHLLNLKATELRLGIPGSESPERDPDISFRSSSQLDEKTLFPLHPSGDGRYSSPHKA 148
           + N  LLNLKATELRLG+PGSESPERD DIS R+SSQLDEK LFPLHPS DG Y SP+KA
Sbjct: 61  DENKPLLNLKATELRLGLPGSESPERDSDISLRNSSQLDEKPLFPLHPSNDGLYPSPNKA 120

Query: 149 VVSGNKRGFSDAMNEFSEGKYNANIGLKAGSLLENLGSEMGKLKEATTQKAVQERSLENS 208
           VVSGNKRGFSDAMNEFS+GKY++N+GLK GSLLENLGS+MGK+KEA+TQK VQER  ENS
Sbjct: 121 VVSGNKRGFSDAMNEFSKGKYHSNLGLKPGSLLENLGSQMGKVKEASTQKVVQERPQENS 180

Query: 209 ETRPSQSEAANNNTSAPVSK 228
           ETRPSQ+E ANNNTSAPVSK
Sbjct: 181 ETRPSQNETANNNTSAPVSK 200

[Close]

BLAST of Cp4.1LG11g04910 vs. TAIR 10
Match: AT5G65670.1 (indole-3-acetic acid inducible 9 )

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-22
Identity = 71/190 (37.37%), Postives = 106/190 (55.79%), Query Frame = 0


Query: 40  EESRSNVTLLASPSSMESVSQNNL-GFEERNYMGLSVSSSEESCMTATKPNGNNHLLNLK 99
           EE +SNV++ +S  +   +S+N L G +E NY+GLS  SS  S   +     +   ++LK
Sbjct: 5   EELQSNVSVASSSPTSNCISRNTLGGLKEHNYLGLSDCSSVGSSTLSPLAEDDKATISLK 64

Query: 100 ATELRLGIPGSESPERDPDISFRSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFS 159
           ATEL LG+PGS+SP RD +++  S ++LDEK  FPL PS D   SS  K   SGNKRGFS
Sbjct: 65  ATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFS 124

Query: 160 DAMNEFSEGKYNANIGLKAGSLLENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAA 219
           D M++F+E K +                +     EA   ++V ++ +  +  +  QS   
Sbjct: 125 DTMDQFAEAKSSV------------YTEKNWMFPEAAATQSVTKKDVPQNIPK-GQSSTT 181

Query: 220 NNNTSAPVSK 229
           NN++S P +K
Sbjct: 185 NNSSSPPAAK 181

[Close]

BLAST of Cp4.1LG11g04910 vs. TAIR 10
Match: AT5G65670.2 (indole-3-acetic acid inducible 9 )

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-22
Identity = 71/190 (37.37%), Postives = 106/190 (55.79%), Query Frame = 0


Query: 40  EESRSNVTLLASPSSMESVSQNNL-GFEERNYMGLSVSSSEESCMTATKPNGNNHLLNLK 99
           EE +SNV++ +S  +   +S+N L G +E NY+GLS  SS  S   +     +   ++LK
Sbjct: 5   EELQSNVSVASSSPTSNCISRNTLGGLKEHNYLGLSDCSSVGSSTLSPLAEDDKATISLK 64

Query: 100 ATELRLGIPGSESPERDPDISFRSSSQLDEKTLFPLHPSGDGRYSSPHKAVVSGNKRGFS 159
           ATEL LG+PGS+SP RD +++  S ++LDEK  FPL PS D   SS  K   SGNKRGFS
Sbjct: 65  ATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFS 124

Query: 160 DAMNEFSEGKYNANIGLKAGSLLENLGSEMGKLKEATTQKAVQERSLENSETRPSQSEAA 219
           D M++F+E K +                +     EA   ++V ++ +  +  +  QS   
Sbjct: 125 DTMDQFAEAKSSV------------YTEKNWMFPEAAATQSVTKKDVPQNIPK-GQSSTT 181

Query: 220 NNNTSAPVSK 229
           NN++S P +K
Sbjct: 185 NNSSSPPAAK 181

[Close]

BLAST of Cp4.1LG11g04910 vs. TAIR 10
Match: AT2G22670.1 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 93.2 bits (230), Expect = 2.9e-19
Identity = 60/112 (53.57%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 66  EERNYMGLSVSSSEESCMTATKPN--GNNHLLNLKATELRLGIPGSESPERDPDISFRSS 125
           +ERNY+GLS  SS +S   +T PN  G ++ LN KATELRLG+P S+SPER+ D    S 
Sbjct: 20  KERNYLGLSDCSSVDS---STIPNVVGKSN-LNFKATELRLGLPESQSPERETDFGLLSP 79

Query: 126 SQLDEKTLFPLHPSGD-GRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIG 175
              DEK LFPL PS D G  ++ HK VVSGNKRGF+D  +EFS  K +   G
Sbjct: 80  RTPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSGVKGSVRPG 127

[Close]

BLAST of Cp4.1LG11g04910 vs. TAIR 10
Match: AT2G22670.2 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 93.2 bits (230), Expect = 2.9e-19
Identity = 60/112 (53.57%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 66  EERNYMGLSVSSSEESCMTATKPN--GNNHLLNLKATELRLGIPGSESPERDPDISFRSS 125
           +ERNY+GLS  SS +S   +T PN  G ++ LN KATELRLG+P S+SPER+ D    S 
Sbjct: 20  KERNYLGLSDCSSVDS---STIPNVVGKSN-LNFKATELRLGLPESQSPERETDFGLLSP 79

Query: 126 SQLDEKTLFPLHPSGD-GRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIG 175
              DEK LFPL PS D G  ++ HK VVSGNKRGF+D  +EFS  K +   G
Sbjct: 80  RTPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSGVKGSVRPG 127

[Close]

BLAST of Cp4.1LG11g04910 vs. TAIR 10
Match: AT2G22670.3 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 93.2 bits (230), Expect = 2.9e-19
Identity = 60/112 (53.57%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 66  EERNYMGLSVSSSEESCMTATKPN--GNNHLLNLKATELRLGIPGSESPERDPDISFRSS 125
           +ERNY+GLS  SS +S   +T PN  G ++ LN KATELRLG+P S+SPER+ D    S 
Sbjct: 20  KERNYLGLSDCSSVDS---STIPNVVGKSN-LNFKATELRLGLPESQSPERETDFGLLSP 79

Query: 126 SQLDEKTLFPLHPSGD-GRYSSPHKAVVSGNKRGFSDAMNEFSEGKYNANIG 175
              DEK LFPL PS D G  ++ HK VVSGNKRGF+D  +EFS  K +   G
Sbjct: 80  RTPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSGVKGSVRPG 127

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g04910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38827	3.9e-21	37.37	Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1	[more]
Q38826	4.1e-18	53.57	Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1	[more]
Q9ZSY8	9.4e-07	32.26	Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=...	[more]

BLAST of Cp4.1LG11g04910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546195.1	1.28e-151	100.00	auxin-responsive protein IAA8-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022961922.1	9.92e-149	98.68	auxin-responsive protein IAA8-like isoform X1 [Cucurbita moschata]	[more]
XP_022997180.1	5.95e-143	96.05	auxin-responsive protein IAA8-like isoform X1 [Cucurbita maxima]	[more]
KAG6598749.1	1.25e-136	98.11	Auxin-responsive protein IAA8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023546196.1	1.35e-130	100.00	auxin-responsive protein IAA8-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG11g04910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HBE4	4.80e-149	98.68	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462547 PE=3 SV=1	[more]
A0A6J1K8V2	2.88e-143	96.05	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492157 PE=3 SV=1	[more]
A0A6J1HD78	4.35e-129	99.00	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462547 PE=3 SV=1	[more]
A0A6J1K6S8	2.37e-126	97.50	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492157 PE=3 SV=1	[more]
A0A6J1KMY6	3.99e-103	82.50	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111496059 PE=3 SV=1	[more]

BLAST of Cp4.1LG11g04910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65670.1	2.8e-22	37.37	indole-3-acetic acid inducible 9	[more]
AT5G65670.2	2.8e-22	37.37	indole-3-acetic acid inducible 9	[more]
AT2G22670.1	2.9e-19	53.57	indoleacetic acid-induced protein 8	[more]
AT2G22670.2	2.9e-19	53.57	indoleacetic acid-induced protein 8	[more]
AT2G22670.3	2.9e-19	53.57	indoleacetic acid-induced protein 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 191..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..228
None	No IPR available	PANTHER	PTHR31734:SF165	AUXIN-RESPONSIVE PROTEIN	coord: 21..169
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 21..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g04910.1	Cp4.1LG11g04910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus