Cp4.1LG11g04900 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g04900
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Carbonic anhydrase
Location	Cp4.1LG11: 2788103 .. 2790487 (+)
RNA-Seq Expression	Cp4.1LG11g04900
Synteny	Cp4.1LG11g04900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCCTTTTCTCATCATTTTCCATTGGGAGAAATTCTGTTTCTGTGAGTTCTTCCACTTTCTGTTTCTTTGTTGTGCTGTAATCTTAGCGTTAGATTGGTTTTTCTTTCGATGGAATTCGGGATTTGAACGAAGAAATCGATGAAACTAATCCGGAAGTGCTTCTTAGCGCATTCAGGAGCGGGTATTTCCTTCATGTGATTAATTTACTGTATGAATGTTTAATGGAAGAAAATCCGATCAATTTTCTCTTCTGGATTCTTATTTTTACTTTCTGATAAGGTTGGAGGTCTCGAGGAGCTCATCTGGCATGGAAGTGAAGGATGCAGATAAGGTGTTTGATGAAATGACAAAGAAGATTTCTGAGTTTTAAGAACCACAAGTTTTTGTAAGTTGGGGATCGGTTTTTAATCCAAGGATTTCTTATGAAACAGGCAACATTTGGAGCATTTTCAAGCTCTTGTAGATCTGCAAGCCCCTAAGGTAATGAAGATGATGAACAGTCCTGTTTTGACATCACTTAAGTTCGTTGCTATTTAATTACATTGGATATTTCAACATAACCTCACATGTATAGAACAGTTCATGGCGATTTCTTGTGTGGATTCTGGAGTATGTTCTGTTGGATGATGAAAGTCCCACGTCGGCTAATTTAGGGATTGATCATGAGTTTATAATCACGGAATACTCTCTCCATTGGTATGAGGGCTTTAGCCATGAGAGCTTATGTTCAAAGTGGACAATATCATACCATTCTGGAGAGTCGTGTTCATCTAACATGTCCATCCAATATCCTCGGATTTCAACCCGGAGAAGCTTTCGCAGTTCGTAACGTAGCAAACATCGTTCCACCATGGGAGGTATGAAGCATTGTGCTAACATCTTGCATTATCCAAGTCTGAGTGGACTAATTTCAGTATTTGCATTTTATTTCTAATACAGAATGGTCCAACTGAAACCAATGCAGGCCTTGAATTTGCAATGAACACATTAAAAGTAGGCTATTTTCCATTCTTCTTGCTGTCAAATTTGATCTTTATCATCTCTAGACTGAATATTCTTCTCATTAGAGAGTGCATTTATTTGATGAATTCTTAAGAGAACTAGTTTTATGCTCAAGGTTGAGAACATTTTAGTCCTTGGCCACAGTAGCTGTGCTGGAATTCAGGGCCTTATGATCATGGAAGATGATGCTATCAACTCGAGGTTCCACTTTCTTCAACTCCCTTGTATCTCATATGTAACAATCCAAGCCCACCGCTAGCAGATACTATCTTTTTTGGATTTTTCCTTTCGGGTTTCCCCTCAAGGTTTTTAAAACGCGTCGACTAGGGAGAAGTTTCCACACCCTTATAAAGAATGCTTTGTTCTCCTCCCTAACCGATGTGAGATCTCACAATCTACCCCCTTCAGGACCCAGCATCCTCGTTGACACTCGTTCCCTTCTCCAATTGATGTGGAACCCCCCAAATCCACCCCATTTTGGGGCTCAGTTTCTTCGCTAGCACATCGTCCAATGTCCACCTCCTTCAGGGCTCAGCATCCTTGCTGGCACACCAACCGGTGTCTGGCTCTGATATCATTTGTAATAGCCCAAACGCACCGATAGCAGAGATTGTTCTCTTCGACTTTCCTTTTCGAGCTTCTCCTTGAGGTTTTTAAAATGTGTATGCTGAGAAGAGGTTTCTACAATCTTATAAAGAATGATTCGTTCTCCTTCTCGACCGATCTGAGATCTCACATTATATATCTTTTTTCTGGTATTTGTTCGTTTTTCAAGCTGTAATTTGTAGCATATTCTTATATGGTAGCTTTGTTCATAAGTGGGTGGTGAACGGAAAGGCTGCTAGGTTAAGAACAAAAGCTGCTGCTGCACATCTTAGTTTTGACCAGCAATGTAAGCATTGCGAGAAGGTACTGATATACTTTCGCTGCAAACATGAACCACACGATCTTTGTTTCAATTTCATTCATCTTCCCCAGTTCATTTTTTAGATTAGAATCTGTTTCTTTCTCTATTAATTCATGTGTAAAGTTGTGAGATCCCACGTTAAGTTGGAGAGGGGACTAAAACATTCATTGTAAGGGTGTGGAAATCTCTTCCTAGTAGACGTGTTTTAAAAATTGTAAAGCTGACAGCGATACGTAATGGGTCAAAGCGGACAATATTTGCCAGCGGTAACTTGAGTTGTTACAAATGGTTCAGAGCCAGTCACTAAGTGGTGTGCCTGTGAGAACGTTGAACTCCAAGGAGGTGGATTGTGAGATCCAACATCAGTTGGAGAGGGAAACGAAACATTTCTTATAAGAGTGTGGAAATCTCTTCCTAGCATACGCGTTTTAAAAATCGTGAAGCTGACGATGGTACGTAACGAACCAAAGCGAT

mRNA sequence

CATCCTTTTCTCATCATTTTCCATTGGGAGAAATTCTGTTTCTGTGAGTTCTTCCACTTTCTGTTTCTTTGTTGTGCTGTAATCTTAGCGTTAGATTGGTTTTTCTTTCGATGGAATTCGGGATTTGAACGAAGAAATCGATGAAACTAATCCGGAAGTGCTTCTTAGCGCATTCAGGAGCGGGTTGGAGGTCTCGAGGAGCTCATCTGGCATGGAAGTGAAGGATGCAGATAAGAATGGTCCAACTGAAACCAATGCAGGCCTTGAATTTGCAATGAACACATTAAAAGTTGAGAACATTTTAGTCCTTGGCCACAGTAGCTGTGCTGGAATTCAGGGCCTTATGATCATGGAAGATGATGCTATCAACTCGAGCTTTGTTCATAAGTGGGTGGTGAACGGAAAGGCTGCTAGGTTAAGAACAAAAGCTGCTGCTGCACATCTTAGTTTTGACCAGCAATGTAAGCATTGCGAGAAGGTACTGATATACTTTCGCTGCAAACATGAACCACACGATCTTTGTTTCAATTTCATTCATCTTCCCCAGTTCATTTTTTAGATTAGAATCTGTTTCTTTCTCTATTAATTCATGTGTAAAGTTGTGAGATCCCACGTTAAGTTGGAGAGGGGACTAAAACATTCATTGTAAGGGTGTGGAAATCTCTTCCTAGTAGACGTGTTTTAAAAATTGTAAAGCTGACAGCGATACGTAATGGGTCAAAGCGGACAATATTTGCCAGCGGTAACTTGAGTTGTTACAAATGGTTCAGAGCCAGTCACTAAGTGGTGTGCCTGTGAGAACGTTGAACTCCAAGGAGGTGGATTGTGAGATCCAACATCAGTTGGAGAGGGAAACGAAACATTTCTTATAAGAGTGTGGAAATCTCTTCCTAGCATACGCGTTTTAAAAATCGTGAAGCTGACGATGGTACGTAACGAACCAAAGCGAT

Coding sequence (CDS)

ATGGAAGTGAAGGATGCAGATAAGAATGGTCCAACTGAAACCAATGCAGGCCTTGAATTTGCAATGAACACATTAAAAGTTGAGAACATTTTAGTCCTTGGCCACAGTAGCTGTGCTGGAATTCAGGGCCTTATGATCATGGAAGATGATGCTATCAACTCGAGCTTTGTTCATAAGTGGGTGGTGAACGGAAAGGCTGCTAGGTTAAGAACAAAAGCTGCTGCTGCACATCTTAGTTTTGACCAGCAATGTAAGCATTGCGAGAAGGTACTGATATACTTTCGCTGCAAACATGAACCACACGATCTTTGTTTCAATTTCATTCATCTTCCCCAGTTCATTTTTTAG

Protein sequence

MEVKDADKNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDAINSSFVHKWVVNGKAARLRTKAAAAHLSFDQQCKHCEKVLIYFRCKHEPHDLCFNFIHLPQFIF

Homology

[Close]

BLAST of Cp4.1LG11g04900 vs. ExPASy Swiss-Prot
Match: Q94CE3 (Beta carbonic anhydrase 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCA5 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.6e-25
Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDAINSSFVHKWVVNGKAA 67
           ++GPTET A LEF++NTL VENILV+GHS C GIQ LM MED+  + SF+H WVV GK A
Sbjct: 152 ESGPTETKAALEFSVNTLNVENILVIGHSRCGGIQALMKMEDEGDSRSFIHNWVVVGKKA 211

Query: 68  RLRTKAAAAHLSFDQQCKHCEKVLI 93
           +  TKA A++L FD QC+HCEK  I
Sbjct: 212 KESTKAVASNLHFDHQCQHCEKASI 236

[Close]

BLAST of Cp4.1LG11g04900 vs. ExPASy Swiss-Prot
Match: Q9C6F5 (Beta carbonic anhydrase 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BCA6 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.1e-23
Identity = 50/83 (60.24%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMED-DAINSSFVHKWVVNGKA 67
           +NGPTETN+ LEFA+ TL+VENI+V+GHS+C GI  LM  ++    +SS V +WV+NGKA
Sbjct: 146 QNGPTETNSALEFAVTTLQVENIIVMGHSNCGGIAALMSHQNHQGQHSSLVERWVMNGKA 205

Query: 68  ARLRTKAAAAHLSFDQQCKHCEK 90
           A+LRT+ A++HLSFD+QC++CEK
Sbjct: 206 AKLRTQLASSHLSFDEQCRNCEK 228

[Close]

BLAST of Cp4.1LG11g04900 vs. ExPASy Swiss-Prot
Match: Q94CE4 (Beta carbonic anhydrase 4 OS=Arabidopsis thaliana OX=3702 GN=BCA4 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.4e-14
Identity = 41/85 (48.24%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 7   DKNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDA--INSSFVHKWVVNG 66
           D+   +   A +E+A+  LKVENILV+GHS C GI+GLM +EDDA    S F+  WV  G
Sbjct: 141 DQKRHSGVGAAVEYAVVHLKVENILVIGHSCCGGIKGLMSIEDDAAPTQSDFIENWVKIG 200

Query: 67  KAARLRTKAAAAHLSFDQQCKHCEK 90
            +AR + K     LS+D QC  CEK
Sbjct: 201 ASARNKIKEEHKDLSYDDQCNKCEK 225

[Close]

BLAST of Cp4.1LG11g04900 vs. ExPASy Swiss-Prot
Match: Q9ZUC2 (Beta carbonic anhydrase 3 OS=Arabidopsis thaliana OX=3702 GN=BCA3 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.9e-12
Identity = 36/85 (42.35%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 7   DKNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDA--INSSFVHKWVVNG 66
           DK   +   A LE+ +  L VENILV+GHS C GI+GLM +ED+     + F+  W+   
Sbjct: 119 DKTKHSNVGAALEYPITVLNVENILVIGHSCCGGIKGLMAIEDNTAPTKTEFIENWIQIC 178

Query: 67  KAARLRTKAAAAHLSFDQQCKHCEK 90
             A+ R K     LSF+ QC +CEK
Sbjct: 179 APAKNRIKQDCKDLSFEDQCTNCEK 203

[Close]

BLAST of Cp4.1LG11g04900 vs. ExPASy Swiss-Prot
Match: P46513 (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis OX=4225 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.4e-11
Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 0


Query: 16  AGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDAINSS-FVHKWVVNGKAARLRTKAA 75
           A +E+A+  LKVENI+V+GHS C GI+GLM + DD   +S F+ +WV  G  A+ + KA 
Sbjct: 62  AAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLPAKSKVKAN 121

Query: 76  AAHLSFDQQCKHCEK 90
             +L F   C  CEK
Sbjct: 122 CNNLEFADLCTKCEK 136

[Close]

BLAST of Cp4.1LG11g04900 vs. NCBI nr
Match: XP_038885516.1 (beta carbonic anhydrase 5, chloroplastic-like isoform X5 [Benincasa hispida])

HSP 1 Score: 145 bits (366), Expect = 3.42e-40
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDAINSSFVHKWVVNGKAA 67
           +NGPTETNA LEFA+NTL+VENILV+GHSSCAGIQ LM MED+A++SSFVHKWVVN KAA
Sbjct: 149 ENGPTETNAALEFAVNTLEVENILVIGHSSCAGIQSLMSMEDNALDSSFVHKWVVNAKAA 208

Query: 68  RLRTKAAAAHLSFDQQCKHCEK 89
           +LR KAA AHLSFDQQCKHCEK
Sbjct: 209 KLRAKAAGAHLSFDQQCKHCEK 230

[Close]

BLAST of Cp4.1LG11g04900 vs. NCBI nr
Match: XP_008444935.1 (PREDICTED: beta carbonic anhydrase 5, chloroplastic-like isoform X2 [Cucumis melo] >KAA0065088.1 beta carbonic anhydrase 5 [Cucumis melo var. makuwa])

HSP 1 Score: 144 bits (364), Expect = 6.99e-40
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDAINSSFVHKWVVNGKAA 67
           +NGPTETNA LEFA+NTL+VENILV+GHSSCAGIQ LM M+D+A +SSFVHKWVVN KAA
Sbjct: 149 ENGPTETNAALEFAVNTLEVENILVIGHSSCAGIQSLMSMQDNATDSSFVHKWVVNAKAA 208

Query: 68  RLRTKAAAAHLSFDQQCKHCEK 89
           +LR KAAAAHLSFDQQCKHCEK
Sbjct: 209 KLRAKAAAAHLSFDQQCKHCEK 230

[Close]

BLAST of Cp4.1LG11g04900 vs. NCBI nr
Match: XP_004152596.1 (beta carbonic anhydrase 5, chloroplastic isoform X2 [Cucumis sativus] >KAE8652141.1 hypothetical protein Csa_022623 [Cucumis sativus])

HSP 1 Score: 144 bits (363), Expect = 9.87e-40
Identity = 68/82 (82.93%), Postives = 75/82 (91.46%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDAINSSFVHKWVVNGKAA 67
           +NGPTETNA LEFA+NTL+VENILV+GHSSCAGIQ LM M+D+A  SSFVHKWVVN KAA
Sbjct: 149 ENGPTETNAALEFAVNTLEVENILVIGHSSCAGIQSLMSMQDNATGSSFVHKWVVNAKAA 208

Query: 68  RLRTKAAAAHLSFDQQCKHCEK 89
           +LR KAAAAHLSFDQQCKHCEK
Sbjct: 209 KLRAKAAAAHLSFDQQCKHCEK 230

[Close]

BLAST of Cp4.1LG11g04900 vs. NCBI nr
Match: XP_038885513.1 (beta carbonic anhydrase 5, chloroplastic-like isoform X2 [Benincasa hispida])

HSP 1 Score: 145 bits (366), Expect = 1.08e-39
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDAINSSFVHKWVVNGKAA 67
           +NGPTETNA LEFA+NTL+VENILV+GHSSCAGIQ LM MED+A++SSFVHKWVVN KAA
Sbjct: 199 ENGPTETNAALEFAVNTLEVENILVIGHSSCAGIQSLMSMEDNALDSSFVHKWVVNAKAA 258

Query: 68  RLRTKAAAAHLSFDQQCKHCEK 89
           +LR KAA AHLSFDQQCKHCEK
Sbjct: 259 KLRAKAAGAHLSFDQQCKHCEK 280

[Close]

BLAST of Cp4.1LG11g04900 vs. NCBI nr
Match: XP_023537826.1 (beta carbonic anhydrase 5, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 145 bits (366), Expect = 1.31e-39
Identity = 68/82 (82.93%), Postives = 75/82 (91.46%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDAINSSFVHKWVVNGKAA 67
           +NGPTETNA LEFA+NTLKVENILV+GHSSCAGIQ LM MEDDA +SSFVHKW+VN K A
Sbjct: 208 ENGPTETNAALEFAVNTLKVENILVIGHSSCAGIQSLMSMEDDATDSSFVHKWMVNAKVA 267

Query: 68  RLRTKAAAAHLSFDQQCKHCEK 89
           +LR KAAAAHL+FDQQCKHCEK
Sbjct: 268 KLRAKAAAAHLNFDQQCKHCEK 289

[Close]

BLAST of Cp4.1LG11g04900 vs. ExPASy TrEMBL
Match: A0A5A7VBT4 (Carbonic anhydrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004200 PE=3 SV=1)

HSP 1 Score: 144 bits (364), Expect = 3.39e-40
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDAINSSFVHKWVVNGKAA 67
           +NGPTETNA LEFA+NTL+VENILV+GHSSCAGIQ LM M+D+A +SSFVHKWVVN KAA
Sbjct: 149 ENGPTETNAALEFAVNTLEVENILVIGHSSCAGIQSLMSMQDNATDSSFVHKWVVNAKAA 208

Query: 68  RLRTKAAAAHLSFDQQCKHCEK 89
           +LR KAAAAHLSFDQQCKHCEK
Sbjct: 209 KLRAKAAAAHLSFDQQCKHCEK 230

[Close]

BLAST of Cp4.1LG11g04900 vs. ExPASy TrEMBL
Match: A0A1S3BCE3 (Carbonic anhydrase OS=Cucumis melo OX=3656 GN=LOC103488130 PE=3 SV=1)

HSP 1 Score: 144 bits (364), Expect = 3.39e-40
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDAINSSFVHKWVVNGKAA 67
           +NGPTETNA LEFA+NTL+VENILV+GHSSCAGIQ LM M+D+A +SSFVHKWVVN KAA
Sbjct: 149 ENGPTETNAALEFAVNTLEVENILVIGHSSCAGIQSLMSMQDNATDSSFVHKWVVNAKAA 208

Query: 68  RLRTKAAAAHLSFDQQCKHCEK 89
           +LR KAAAAHLSFDQQCKHCEK
Sbjct: 209 KLRAKAAAAHLSFDQQCKHCEK 230

[Close]

BLAST of Cp4.1LG11g04900 vs. ExPASy TrEMBL
Match: A0A6J1GHD3 (beta carbonic anhydrase 5, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454204 PE=4 SV=1)

HSP 1 Score: 145 bits (366), Expect = 6.32e-40
Identity = 68/82 (82.93%), Postives = 75/82 (91.46%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDAINSSFVHKWVVNGKAA 67
           +NGPTETNA LEFA+NTLKVENILV+GHSSCAGIQ LM MEDDA +SSFVHKW+VN K A
Sbjct: 208 ENGPTETNAALEFAVNTLKVENILVIGHSSCAGIQSLMSMEDDATDSSFVHKWMVNAKVA 267

Query: 68  RLRTKAAAAHLSFDQQCKHCEK 89
           +LR KAAAAHL+FDQQCKHCEK
Sbjct: 268 KLRAKAAAAHLNFDQQCKHCEK 289

[Close]

BLAST of Cp4.1LG11g04900 vs. ExPASy TrEMBL
Match: A0A6J1KRT8 (Carbonic anhydrase OS=Cucurbita maxima OX=3661 GN=LOC111495926 PE=3 SV=1)

HSP 1 Score: 144 bits (362), Expect = 1.92e-39
Identity = 67/82 (81.71%), Postives = 74/82 (90.24%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDAINSSFVHKWVVNGKAA 67
           +NGPTETNA LEFA+NTLKVENILV+GHSSCAGIQ LM MEDDA +SSFVHKW+ N K A
Sbjct: 196 ENGPTETNAALEFAVNTLKVENILVIGHSSCAGIQSLMSMEDDATDSSFVHKWMANAKVA 255

Query: 68  RLRTKAAAAHLSFDQQCKHCEK 89
           +LR KAAAAHL+FDQQCKHCEK
Sbjct: 256 KLRAKAAAAHLNFDQQCKHCEK 277

[Close]

BLAST of Cp4.1LG11g04900 vs. ExPASy TrEMBL
Match: A0A6J1BPW2 (Carbonic anhydrase OS=Momordica charantia OX=3673 GN=LOC111004573 PE=3 SV=1)

HSP 1 Score: 139 bits (351), Expect = 4.62e-38
Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDAINSSFVHKWVVNGKAA 67
           +NGPTETNA LEFA+NTL+VENILV+GHSSCAGIQ +M MEDD   SSFVHKW+ N K A
Sbjct: 168 ENGPTETNAALEFAVNTLEVENILVIGHSSCAGIQSIMSMEDDVTASSFVHKWMANAKVA 227

Query: 68  RLRTKAAAAHLSFDQQCKHCEK 89
           +LRTKAAAAHLSFDQQCK+CEK
Sbjct: 228 KLRTKAAAAHLSFDQQCKYCEK 249

[Close]

BLAST of Cp4.1LG11g04900 vs. TAIR 10
Match: AT4G33580.1 (beta carbonic anhydrase 5 )

HSP 1 Score: 114.8 bits (286), Expect = 4.7e-26
Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDAINSSFVHKWVVNGKAA 67
           ++GPTET A LEF++NTL VENILV+GHS C GIQ LM MED+  + SF+H WVV GK A
Sbjct: 152 ESGPTETKAALEFSVNTLNVENILVIGHSRCGGIQALMKMEDEGDSRSFIHNWVVVGKKA 211

Query: 68  RLRTKAAAAHLSFDQQCKHCEKVLI 93
           +  TKA A++L FD QC+HCEK  I
Sbjct: 212 KESTKAVASNLHFDHQCQHCEKASI 236

[Close]

BLAST of Cp4.1LG11g04900 vs. TAIR 10
Match: AT4G33580.2 (beta carbonic anhydrase 5 )

HSP 1 Score: 114.8 bits (286), Expect = 4.7e-26
Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMEDDAINSSFVHKWVVNGKAA 67
           ++GPTET A LEF++NTL VENILV+GHS C GIQ LM MED+  + SF+H WVV GK A
Sbjct: 153 ESGPTETKAALEFSVNTLNVENILVIGHSRCGGIQALMKMEDEGDSRSFIHNWVVVGKKA 212

Query: 68  RLRTKAAAAHLSFDQQCKHCEKVLI 93
           +  TKA A++L FD QC+HCEK  I
Sbjct: 213 KESTKAVASNLHFDHQCQHCEKASI 237

[Close]

BLAST of Cp4.1LG11g04900 vs. TAIR 10
Match: AT1G58180.1 (beta carbonic anhydrase 6 )

HSP 1 Score: 109.8 bits (273), Expect = 1.5e-24
Identity = 50/83 (60.24%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMED-DAINSSFVHKWVVNGKA 67
           +NGPTETN+ LEFA+ TL+VENI+V+GHS+C GI  LM  ++    +SS V +WV+NGKA
Sbjct: 146 QNGPTETNSALEFAVTTLQVENIIVMGHSNCGGIAALMSHQNHQGQHSSLVERWVMNGKA 205

Query: 68  ARLRTKAAAAHLSFDQQCKHCEK 90
           A+LRT+ A++HLSFD+QC++CEK
Sbjct: 206 AKLRTQLASSHLSFDEQCRNCEK 228

[Close]

BLAST of Cp4.1LG11g04900 vs. TAIR 10
Match: AT1G58180.2 (beta carbonic anhydrase 6 )

HSP 1 Score: 109.8 bits (273), Expect = 1.5e-24
Identity = 50/83 (60.24%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMED-DAINSSFVHKWVVNGKA 67
           +NGPTETN+ LEFA+ TL+VENI+V+GHS+C GI  LM  ++    +SS V +WV+NGKA
Sbjct: 146 QNGPTETNSALEFAVTTLQVENIIVMGHSNCGGIAALMSHQNHQGQHSSLVERWVMNGKA 205

Query: 68  ARLRTKAAAAHLSFDQQCKHCEK 90
           A+LRT+ A++HLSFD+QC++CEK
Sbjct: 206 AKLRTQLASSHLSFDEQCRNCEK 228

[Close]

BLAST of Cp4.1LG11g04900 vs. TAIR 10
Match: AT1G58180.3 (beta carbonic anhydrase 6 )

HSP 1 Score: 109.8 bits (273), Expect = 1.5e-24
Identity = 50/83 (60.24%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 8   KNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMIMED-DAINSSFVHKWVVNGKA 67
           +NGPTETN+ LEFA+ TL+VENI+V+GHS+C GI  LM  ++    +SS V +WV+NGKA
Sbjct: 95  QNGPTETNSALEFAVTTLQVENIIVMGHSNCGGIAALMSHQNHQGQHSSLVERWVMNGKA 154

Query: 68  ARLRTKAAAAHLSFDQQCKHCEK 90
           A+LRT+ A++HLSFD+QC++CEK
Sbjct: 155 AKLRTQLASSHLSFDEQCRNCEK 177

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g04900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CE3	6.6e-25	62.35	Beta carbonic anhydrase 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCA5...	[more]
Q9C6F5	2.1e-23	60.24	Beta carbonic anhydrase 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BCA6...	[more]
Q94CE4	2.4e-14	48.24	Beta carbonic anhydrase 4 OS=Arabidopsis thaliana OX=3702 GN=BCA4 PE=1 SV=1	[more]
Q9ZUC2	2.9e-12	42.35	Beta carbonic anhydrase 3 OS=Arabidopsis thaliana OX=3702 GN=BCA3 PE=2 SV=1	[more]
P46513	2.4e-11	46.67	Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis OX=4225 PE=2 SV=1	[more]

BLAST of Cp4.1LG11g04900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885516.1	3.42e-40	82.93	beta carbonic anhydrase 5, chloroplastic-like isoform X5 [Benincasa hispida]	[more]
XP_008444935.1	6.99e-40	82.93	PREDICTED: beta carbonic anhydrase 5, chloroplastic-like isoform X2 [Cucumis mel...	[more]
XP_004152596.1	9.87e-40	82.93	beta carbonic anhydrase 5, chloroplastic isoform X2 [Cucumis sativus] >KAE865214...	[more]
XP_038885513.1	1.08e-39	82.93	beta carbonic anhydrase 5, chloroplastic-like isoform X2 [Benincasa hispida]	[more]
XP_023537826.1	1.31e-39	82.93	beta carbonic anhydrase 5, chloroplastic-like isoform X2 [Cucurbita pepo subsp. ...	[more]

BLAST of Cp4.1LG11g04900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VBT4	3.39e-40	82.93	Carbonic anhydrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00...	[more]
A0A1S3BCE3	3.39e-40	82.93	Carbonic anhydrase OS=Cucumis melo OX=3656 GN=LOC103488130 PE=3 SV=1	[more]
A0A6J1GHD3	6.32e-40	82.93	beta carbonic anhydrase 5, chloroplastic-like isoform X2 OS=Cucurbita moschata O...	[more]
A0A6J1KRT8	1.92e-39	81.71	Carbonic anhydrase OS=Cucurbita maxima OX=3661 GN=LOC111495926 PE=3 SV=1	[more]
A0A6J1BPW2	4.62e-38	79.27	Carbonic anhydrase OS=Momordica charantia OX=3673 GN=LOC111004573 PE=3 SV=1	[more]

BLAST of Cp4.1LG11g04900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33580.1	4.7e-26	62.35	beta carbonic anhydrase 5	[more]
AT4G33580.2	4.7e-26	62.35	beta carbonic anhydrase 5	[more]
AT1G58180.1	1.5e-24	60.24	beta carbonic anhydrase 6	[more]
AT1G58180.2	1.5e-24	60.24	beta carbonic anhydrase 6	[more]
AT1G58180.3	1.5e-24	60.24	beta carbonic anhydrase 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036874	Carbonic anhydrase superfamily	GENE3D	3.40.1050.10	Carbonic anhydrase	coord: 2..98 e-value: 8.8E-17 score: 63.2
IPR036874	Carbonic anhydrase superfamily	SUPERFAMILY	53056	beta-carbonic anhydrase, cab	coord: 4..92
IPR001765	Carbonic anhydrase	PFAM	PF00484	Pro_CA	coord: 12..88 e-value: 6.4E-12 score: 46.0
None	No IPR available	PANTHER	PTHR11002	CARBONIC ANHYDRASE	coord: 8..90
None	No IPR available	PANTHER	PTHR11002:SF19	CARBONIC ANHYDRASE	coord: 8..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g04900.1	Cp4.1LG11g04900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015976	carbon utilization
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0004089	carbonate dehydratase activity
molecular_function	GO:0008270	zinc ion binding