Cp4.1LG11g04330 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g04330
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	F-box protein At1g78100-like
Location	Cp4.1LG11: 2446138 .. 2447202 (+)
RNA-Seq Expression	Cp4.1LG11g04330
Synteny	Cp4.1LG11g04330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAGTTCAAGAACAAGAAGCTTCTTCTTCAATTCGCGTCGCCGGTGGCGGCTTTGATTCTCTTCCCGATTCCCTCGTTCTTGTGATATTTAACTTTGTCTCCGACGTCAAATCCTTGATCCGTTGCAGAGCCGTTTCGAAGCGCTTCAACTCCCTCGTTCCTCATTCCGATTCCCTTTTTCTCAAGATCGACTATACCGTTTCCTCCGATTCCGAGTCCGATTCCGATTCTGATTCCGATTCCGATTACGTTCCAAACTCCAAACTATTCGACTTCTTTAAAACTACATTGGAATCGTTCTTCTATTTTATGTCCCCTGTTTTCCTCAAATCCAAATCGCAGACGTCTCCCGCGCAAATCCTCCGCCAGTTCCACCGGATCCAGCGCCTCCAGATCGAGTTTCCGACTAAGGGCATTGAAGTTGCGAGAGCCGTTAAATGGAGAGCGGAGTTCGGTGAAACGTTTAGGAGTTGCGTGATTTTGAGTTTTCAAAAGATTAGGAAATTCGATGGTCGGGCGATGATGGTTGTGGATGATTTCGGTGTCGATTTCTTCCCAAGGATGGAAGCGAGAGTGACCTGGTTGATGCGCACTCTGATAACGGCGTTGGCGAGGCACCATGTGATGGTGGAGGTGGTGCTGGAGCATTTGGAGATGAATCATCTGGTGTTGAGAGACGAGGGAGGGAATGGTGTGGTGGTGATCGAGAAGAATGGTTTAGATGATATTAGGAGATCGAGAGTTCGCGGCGGCGGCGGAGAGACGTCGGAGAGACGGACGACGGAGAGGCGGACGTTGAGAACTAGAGTACCGAGAACGACTGTAAGGATGAAGTACTGGCCATTGCTAGATCTCCAGCACGGGTTATGTATGGAGGACGCCACGTTGGTGGTGGTGAGGCCGACTGGAAATGCCAGCGAGGATGAAACTGCTGACATGGGGAAAGAAGACGCTGACTTGGCACTGAGTGCATTTGAAGATAATGATCTGTACACAGTCGCCGTGGCAGCGTTGTTGACGAAGGGTACTAGGCTTAAGATGGGGATAAACTCTTTCTAG

mRNA sequence

ATGGCGGAAGTTCAAGAACAAGAAGCTTCTTCTTCAATTCGCGTCGCCGGTGGCGGCTTTGATTCTCTTCCCGATTCCCTCGTTCTTGTGATATTTAACTTTGTCTCCGACGTCAAATCCTTGATCCGTTGCAGAGCCGTTTCGAAGCGCTTCAACTCCCTCGTTCCTCATTCCGATTCCCTTTTTCTCAAGATCGACTATACCGTTTCCTCCGATTCCGAGTCCGATTCCGATTCTGATTCCGATTCCGATTACGTTCCAAACTCCAAACTATTCGACTTCTTTAAAACTACATTGGAATCGTTCTTCTATTTTATGTCCCCTGTTTTCCTCAAATCCAAATCGCAGACGTCTCCCGCGCAAATCCTCCGCCAGTTCCACCGGATCCAGCGCCTCCAGATCGAGTTTCCGACTAAGGGCATTGAAGTTGCGAGAGCCGTTAAATGGAGAGCGGAGTTCGGTGAAACGTTTAGGAGTTGCGTGATTTTGAGTTTTCAAAAGATTAGGAAATTCGATGGTCGGGCGATGATGGTTGTGGATGATTTCGGTGTCGATTTCTTCCCAAGGATGGAAGCGAGAGTGACCTGGTTGATGCGCACTCTGATAACGGCGTTGGCGAGGCACCATGTGATGGTGGAGGTGGTGCTGGAGCATTTGGAGATGAATCATCTGGTGTTGAGAGACGAGGGAGGGAATGGTGTGGTGGTGATCGAGAAGAATGGTTTAGATGATATTAGGAGATCGAGAGTTCGCGGCGGCGGCGGAGAGACGTCGGAGAGACGGACGACGGAGAGGCGGACGTTGAGAACTAGAGTACCGAGAACGACTGTAAGGATGAAGTACTGGCCATTGCTAGATCTCCAGCACGGGTTATGTATGGAGGACGCCACGTTGGTGGTGGTGAGGCCGACTGGAAATGCCAGCGAGGATGAAACTGCTGACATGGGGAAAGAAGACGCTGACTTGGCACTGAGTGCATTTGAAGATAATGATCTGTACACAGTCGCCGTGGCAGCGTTGTTGACGAAGGGTACTAGGCTTAAGATGGGGATAAACTCTTTCTAG

Coding sequence (CDS)

ATGGCGGAAGTTCAAGAACAAGAAGCTTCTTCTTCAATTCGCGTCGCCGGTGGCGGCTTTGATTCTCTTCCCGATTCCCTCGTTCTTGTGATATTTAACTTTGTCTCCGACGTCAAATCCTTGATCCGTTGCAGAGCCGTTTCGAAGCGCTTCAACTCCCTCGTTCCTCATTCCGATTCCCTTTTTCTCAAGATCGACTATACCGTTTCCTCCGATTCCGAGTCCGATTCCGATTCTGATTCCGATTCCGATTACGTTCCAAACTCCAAACTATTCGACTTCTTTAAAACTACATTGGAATCGTTCTTCTATTTTATGTCCCCTGTTTTCCTCAAATCCAAATCGCAGACGTCTCCCGCGCAAATCCTCCGCCAGTTCCACCGGATCCAGCGCCTCCAGATCGAGTTTCCGACTAAGGGCATTGAAGTTGCGAGAGCCGTTAAATGGAGAGCGGAGTTCGGTGAAACGTTTAGGAGTTGCGTGATTTTGAGTTTTCAAAAGATTAGGAAATTCGATGGTCGGGCGATGATGGTTGTGGATGATTTCGGTGTCGATTTCTTCCCAAGGATGGAAGCGAGAGTGACCTGGTTGATGCGCACTCTGATAACGGCGTTGGCGAGGCACCATGTGATGGTGGAGGTGGTGCTGGAGCATTTGGAGATGAATCATCTGGTGTTGAGAGACGAGGGAGGGAATGGTGTGGTGGTGATCGAGAAGAATGGTTTAGATGATATTAGGAGATCGAGAGTTCGCGGCGGCGGCGGAGAGACGTCGGAGAGACGGACGACGGAGAGGCGGACGTTGAGAACTAGAGTACCGAGAACGACTGTAAGGATGAAGTACTGGCCATTGCTAGATCTCCAGCACGGGTTATGTATGGAGGACGCCACGTTGGTGGTGGTGAGGCCGACTGGAAATGCCAGCGAGGATGAAACTGCTGACATGGGGAAAGAAGACGCTGACTTGGCACTGAGTGCATTTGAAGATAATGATCTGTACACAGTCGCCGTGGCAGCGTTGTTGACGAAGGGTACTAGGCTTAAGATGGGGATAAACTCTTTCTAG

Protein sequence

MAEVQEQEASSSIRVAGGGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDSDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPAQILRQFHRIQRLQIEFPTKGIEVARAVKWRAEFGETFRSCVILSFQKIRKFDGRAMMVVDDFGVDFFPRMEARVTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVRGGGGETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGINSF

Homology

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BLAST of Cp4.1LG11g04330 vs. ExPASy Swiss-Prot
Match: Q9C9S2 (F-box protein AUF1 OS=Arabidopsis thaliana OX=3702 GN=AUF1 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-49
Identity = 135/351 (38.46%), Postives = 205/351 (58.40%), Query Frame = 0


Query: 20  FDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDSDS 79
           FD++PD +V+ I N V DVK+LIRCR+VSKRFNSL   S+SL L++D  + + +ESDS+ 
Sbjct: 4   FDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGA-TESDSEI 63

Query: 80  DSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLK--------SKSQTSPAQILRQFHRIQR 139
           D        S +  FF++  +S    + P+F K        ++S  +PAQIL  F RI+ 
Sbjct: 64  D--------SPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRN 123

Query: 140 LQIEFPTKGIEVAR--AVKWRAEFGETFRSCVILSFQKI---RKFDGRAMMVVD---DFG 199
           L++E     +++ +  AVKW+AEFG+T +SCVI++F+           A  VVD   +  
Sbjct: 124 LEVELYGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATEAAAVVDGVVESD 183

Query: 200 VDFFPRMEARVTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKNGLD 259
            +F   ++ RV W +  L+ A  RH++M ++V +H EM  L++RD  G G VV++  G+ 
Sbjct: 184 SEFVCGLKTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVRDSDGEGTVVMDAAGMK 243

Query: 260 DIRRSRVRGGGGETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVVVRP 319
           + R + VRG      + + +ER   RT VP   + M++ P L L+ G+C+E ATLVVVRP
Sbjct: 244 EYRETEVRG------DNKESERVGERTVVPSVRMSMRHAPSLMLKSGICLEAATLVVVRP 303

Query: 320 TGNASEDETADMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGINSF 355
           TG AS+D   ++  E    A +   D+ +Y  AV ALL K  R  + +NSF
Sbjct: 304 TGVASDDNDVELVTE----AFAGDGDDCMYGEAVTALL-KRRRNVLEMNSF 334

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BLAST of Cp4.1LG11g04330 vs. ExPASy Swiss-Prot
Match: Q9LM18 (F-box protein AUF2 OS=Arabidopsis thaliana OX=3702 GN=AUF2 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.2e-46
Identity = 126/341 (36.95%), Postives = 197/341 (57.77%), Query Frame = 0


Query: 20  FDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDSDS 79
           FD LPD +++ I N V DVK+L+RC ++SKRFNSLVP S+SL L++D++V          
Sbjct: 4   FDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSV---------- 63

Query: 80  DSDSDYVPNSKLFDFFKTTLESFFYFMS----PVFLKSKSQTSPAQILRQFHRIQRLQIE 139
            SDS  V +      F++        +S    P+ + + S + P +IL +F RI+ L +E
Sbjct: 64  -SDSPVVTS-----IFRSLFNGLVSLLSKPAKPITITTLSPSLPFKILSRFDRIRNLDVE 123

Query: 140 FPTKGIEVAR--AVKWRAEFGETFRSCVILSFQKIRKFDGRAMMVVDDFGVDFFPRMEAR 199
            P   +++ +  AVKW+AEFG+T +SCVI++F+         + V  +   +F   ++ R
Sbjct: 124 LPGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSAGTVSS-PVAVEGESDAEFVTGLKTR 183

Query: 200 VTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVRGG 259
           V W +  L+ A +RH++M EVV EH E+  LV+RD+   G VV+ + GL ++R +  R  
Sbjct: 184 VVWTISALMAASSRHYLMREVVKEHEEIESLVMRDKEREGTVVMNEEGLKELRNTEAR-- 243

Query: 260 GGETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVVVRPTGNASEDETA 319
             E  ER    +R++   VP   + M++ P L L+ G+C+E ATLV+VRP+G  ++ E  
Sbjct: 244 -VEDEERVVKNKRSV---VPSVRMSMRHAPSLKLKSGICLESATLVIVRPSG--ADFEVG 303

Query: 320 DMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGINSF 355
           D    DA+LA  AF  + +Y  AV ALL K  +  + +NSF
Sbjct: 304 D----DAELATEAFVGDCMYGEAVVALL-KCKKNALEMNSF 314

[Close]

BLAST of Cp4.1LG11g04330 vs. ExPASy Swiss-Prot
Match: O49508 (F-box protein At4g18380 OS=Arabidopsis thaliana OX=3702 GN=At4g18380 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.1e-33
Identity = 117/377 (31.03%), Postives = 187/377 (49.60%), Query Frame = 0


Query: 20  FDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDSDS 79
           FD+LPDS++L+IFN + DVK+L RC  VSKRF+SL+P  +++F+++D  +S D  S   S
Sbjct: 25  FDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDDDSSSLLS 84

Query: 80  D---SDSDYVPNSKLFDFFKTTLESFFYFM------------SPVFL------------K 139
           D   S S   P S +F      L++   F+            SP  L             
Sbjct: 85  DKPRSASAASPFSAIFRLVFKPLQALGQFLKRSGSSSLPSGSSPSSLLISGGDDGEIEQG 144

Query: 140 SKSQTSPAQILRQFHRIQRLQIEFPT--KGIEVARAVKWRAEFGETFRSCVILSFQKI-- 199
             +  SP Q+L+ F  I+ L+IE P+   GI+    +KWRAEFG T  +CVIL    +  
Sbjct: 145 GVTHHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLENCVILGASSVIP 204

Query: 200 ------RKFDGRAMMVVDDFG---VDFFPR--MEARVTWLMRTLITALARHHVMVEVVLE 259
                  +     +  V+D G     F+    ++ RV W + +LI A ARH+++  ++ E
Sbjct: 205 PTNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAE 264

Query: 260 HLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVRGGGGETSERRTTERRTLRTRVPRTTV 319
           H  ++ LVL D  G GV+ + ++ L+++R   +           +    + RT VP   +
Sbjct: 265 HKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPL-----------SASSASKRTLVPALNM 324

Query: 320 RMKYWPLLDLQHGLCMEDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAV 355
           R+ Y P L+L  G  ++ ATLV +RP         ++  KE  D++  +   ++ Y VA 
Sbjct: 325 RLWYAPSLELPDGTVLKGATLVAIRP---------SESKKEVCDVSWVSSAFDEPYGVA- 380

[Close]

BLAST of Cp4.1LG11g04330 vs. ExPASy Swiss-Prot
Match: Q9C534 (F-box protein At1g30200 OS=Arabidopsis thaliana OX=3702 GN=At1g30200 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.8e-31
Identity = 116/375 (30.93%), Postives = 178/375 (47.47%), Query Frame = 0


Query: 20  FDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDSD- 79
           FD LPDSL+L+IF+ V+DVK L RC  VS+RF+SLVP  +++ +++D  +S D  S SD 
Sbjct: 26  FDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSSDE 85

Query: 80  -----------SDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQT---------- 139
                      SD+       S LF      +   F  +  +    +S +          
Sbjct: 86  NHRFSLNTASISDAGGAGGSFSALFRLVFAPIFKPFQMLGQILGPKRSSSSFDASFSAIN 145

Query: 140 --------SPAQILRQFHRIQRLQIEFPT--KGIEVARAVKWRAEFGETFRSCVILSFQK 199
                   SP Q+L+ F  I+ L+IE PT   GIE    +KWRA+FG T  +C+IL    
Sbjct: 146 DEIGVTHHSPTQVLKNFGEIRFLKIELPTGELGIEDGILLKWRADFGSTLDNCMILGASS 205

Query: 200 I---RKFDGRAMMVVDDFG---VDFFPR--MEARVTWLMRTLITALARHHVMVEVVLEHL 259
           +            V +D G     F+    ++ RV W + +LI A ARH+++  ++ EH 
Sbjct: 206 VIQSNSVKNHENSVDEDNGNIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIINEHK 265

Query: 260 EMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVRGGGGETSERRTTERRTLRTRVPRTTVRM 319
            ++ LVL D  G GV+ + +  L+++R + +           +    + RT VP   +R+
Sbjct: 266 SLDRLVLSDADGQGVLCMNREQLEELRVTPL-----------SASSASKRTLVPALNMRL 325

Query: 320 KYWPLLDLQHGLCMEDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAVAA 355
            Y P LDL  G  ++ ATLV +RP+ +  E         DA     AFE+       VA 
Sbjct: 326 WYAPELDLPDGTVLKGATLVAIRPSESKKE-------VCDASWLSDAFEEP---FGTVAK 379

[Close]

BLAST of Cp4.1LG11g04330 vs. ExPASy Swiss-Prot
Match: Q9FNK5 (F-box protein At5g46170 OS=Arabidopsis thaliana OX=3702 GN=At5g46170 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.6e-29
Identity = 111/390 (28.46%), Postives = 176/390 (45.13%), Query Frame = 0


Query: 20  FDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDSDS 79
           FD LPDS++L++FN + DVK+L RC  VS+RF+SLVP  D++ +++D  +S D  S   S
Sbjct: 27  FDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQVDNVVVRVDCVISDDDSSSLSS 86

Query: 80  DSDSDYVPNSKLFDFFKTTLESFFYFMSPV--FLKSKSQT-------------------- 139
                          F+  +      +  +  FL +K  +                    
Sbjct: 87  IKSRSGSSAGSFSAIFRLVVGGIVKPLQALGQFLGTKRSSSSCGGSGSSSSSLSISGDDD 146

Query: 140 ------------SPAQILRQFHRIQRLQIEFPT--KGIEVARAVKWRAEFGETFRSCVIL 199
                       SP Q+L+ F  I+ L+IE P+   GI+    +KWRAEFG T  +CVIL
Sbjct: 147 GGEIEQGGVTHHSPTQVLKNFDEIRYLRIELPSGELGIDDGVLLKWRAEFGSTLDNCVIL 206

Query: 200 SFQKI---------RKFDGRAMMVVDDFGVD--------FFPR--MEARVTWLMRTLITA 259
               +         +  D   ++     G D        F+    ++ RV W + +LI A
Sbjct: 207 GASSVIPPNPMRVSQACDTTTVVEAPGSGSDDNGSIPESFYTNGGLKLRVVWTISSLIAA 266

Query: 260 LARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVRGGGGETSERRTTE 319
            ARH+++  ++ EH  ++ LVL D  G GV+ + ++ L+++R   +              
Sbjct: 267 SARHYLLQPIIAEHKTLDSLVLTDSDGQGVLCMNRDQLEELRVKPLAASSA--------- 326

Query: 320 RRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVVVRPTGNASEDETADMGKEDADLAL 355
             + RT VP   +R+ Y P L+L  G  ++ ATLV +RP+ +  E         D     
Sbjct: 327 --SKRTLVPALNMRLWYAPTLELPDGTVLKGATLVAIRPSESKKE-------VSDISWVS 386

[Close]

BLAST of Cp4.1LG11g04330 vs. NCBI nr
Match: XP_023546363.1 (F-box protein At1g78100-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 681 bits (1757), Expect = 1.41e-246
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0


Query: 1   MAEVQEQEASSSIRVAGGGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDS 60
           MAEVQEQEASSSIRVAGGGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDS
Sbjct: 1   MAEVQEQEASSSIRVAGGGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDS 60

Query: 61  LFLKIDYTVSSDSESDSDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA 120
           LFLKIDYTVSSDSESDSDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA
Sbjct: 61  LFLKIDYTVSSDSESDSDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA 120

Query: 121 QILRQFHRIQRLQIEFPTKGIEVARAVKWRAEFGETFRSCVILSFQKIRKFDGRAMMVVD 180
           QILRQFHRIQRLQIEFPTKGIEVARAVKWRAEFGETFRSCVILSFQKIRKFDGRAMMVVD
Sbjct: 121 QILRQFHRIQRLQIEFPTKGIEVARAVKWRAEFGETFRSCVILSFQKIRKFDGRAMMVVD 180

Query: 181 DFGVDFFPRMEARVTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKN 240
           DFGVDFFPRMEARVTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKN
Sbjct: 181 DFGVDFFPRMEARVTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKN 240

Query: 241 GLDDIRRSRVRGGGGETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVV 300
           GLDDIRRSRVRGGGGETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVV
Sbjct: 241 GLDDIRRSRVRGGGGETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVV 300

Query: 301 VRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGINSF 354
           VRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGINSF
Sbjct: 301 VRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGINSF 354

[Close]

BLAST of Cp4.1LG11g04330 vs. NCBI nr
Match: XP_022962302.1 (F-box protein At1g78100-like [Cucurbita moschata])

HSP 1 Score: 653 bits (1685), Expect = 1.43e-235
Identity = 342/356 (96.07%), Postives = 346/356 (97.19%), Query Frame = 0


Query: 1   MAEVQEQEASSSIRVAGGGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDS 60
           MAEVQEQEASSSIRVAG GFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDS
Sbjct: 1   MAEVQEQEASSSIRVAGDGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDS 60

Query: 61  LFLKIDYTVSSDSESDSDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA 120
           LFLKIDYTVSSDSESD DSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA
Sbjct: 61  LFLKIDYTVSSDSESDPDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA 120

Query: 121 QILRQFHRIQRLQIEFPTKGIEVARAVKWRAEFGETFRSCVILSFQKIRKFDGRAMMVVD 180
           QILRQFHRIQRLQIEFPTK +EVARAVKWRAEFGET RSCVILSF KIRKFDGRAMM VD
Sbjct: 121 QILRQFHRIQRLQIEFPTKDLEVARAVKWRAEFGETLRSCVILSFHKIRKFDGRAMMAVD 180

Query: 181 DFGVDFFPRMEARVTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKN 240
           DFGV+FFPRMEARVTWLMRTLITALARHHVMVEVV+EHLEMNHLVLRDEGGNGVVVIEKN
Sbjct: 181 DFGVNFFPRMEARVTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRDEGGNGVVVIEKN 240

Query: 241 GLDDIRRSRVRGGG--GETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATL 300
           GLDDIRRSRV GGG  GETSERRT ERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATL
Sbjct: 241 GLDDIRRSRVCGGGDGGETSERRTAERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATL 300

Query: 301 VVVRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGINSF 354
           VVVRPTGNASEDETADMGKEDADLALSAFEDND+YTVAVAALLTKGTRLKMGINSF
Sbjct: 301 VVVRPTGNASEDETADMGKEDADLALSAFEDNDMYTVAVAALLTKGTRLKMGINSF 356

[Close]

BLAST of Cp4.1LG11g04330 vs. NCBI nr
Match: KAG6598678.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 648 bits (1671), Expect = 2.01e-233
Identity = 339/357 (94.96%), Postives = 344/357 (96.36%), Query Frame = 0


Query: 1   MAEVQEQEASSSIRVAGGGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDS 60
           MAEVQEQEASSSIRVAG GFDSLPDSLVLVIFNFVSDVKSLI CRAVSKRFNSLVPHSDS
Sbjct: 1   MAEVQEQEASSSIRVAGDGFDSLPDSLVLVIFNFVSDVKSLICCRAVSKRFNSLVPHSDS 60

Query: 61  LFLKIDYTVSSDSESDSDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA 120
           LFLKIDYTVSSDSESD DSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA
Sbjct: 61  LFLKIDYTVSSDSESDPDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA 120

Query: 121 QILRQFHRIQRLQIEFPTKGIEVARAVKWRAEFGETFRSCVILSFQKIRKFDGRAMMVVD 180
           QILRQFHRIQRLQIEFPTKG+EVAR+VKWRAEFGET RSCVILSF KIRKFDGRAMM VD
Sbjct: 121 QILRQFHRIQRLQIEFPTKGVEVARSVKWRAEFGETLRSCVILSFHKIRKFDGRAMMAVD 180

Query: 181 DFGVDFFPRMEARVTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKN 240
           DFGVDFFPRMEARVTWLMRTLITALARHHVMVEVV+EHLEMNHLVLRDEG NGVVVIEKN
Sbjct: 181 DFGVDFFPRMEARVTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRDEGRNGVVVIEKN 240

Query: 241 GLDDIRRSRV---RGGGGETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDAT 300
           GLDDIRRSRV    GGGGETSERRT ERRTLRTRVPRTTVRMKYWPL+DLQHGLCMEDAT
Sbjct: 241 GLDDIRRSRVCGGGGGGGETSERRTAERRTLRTRVPRTTVRMKYWPLVDLQHGLCMEDAT 300

Query: 301 LVVVRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGINSF 354
           LVVVRPTGNASEDETADMG EDADLALSAFEDND+YTVAVAALLTKGTRLKMGINSF
Sbjct: 301 LVVVRPTGNASEDETADMGNEDADLALSAFEDNDMYTVAVAALLTKGTRLKMGINSF 357

[Close]

BLAST of Cp4.1LG11g04330 vs. NCBI nr
Match: XP_022997204.1 (F-box protein At1g78100-like [Cucurbita maxima])

HSP 1 Score: 600 bits (1546), Expect = 1.72e-214
Identity = 315/354 (88.98%), Postives = 328/354 (92.66%), Query Frame = 0


Query: 1   MAEVQEQEASSSIRVAGGGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDS 60
           MAEVQEQ+ASSSIRVAG GFDSLPDSLVLVIFNFVSDVK+LIRCRAVSKRFNSLVPHSDS
Sbjct: 1   MAEVQEQDASSSIRVAGDGFDSLPDSLVLVIFNFVSDVKALIRCRAVSKRFNSLVPHSDS 60

Query: 61  LFLKIDYTVSSDSESDSDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA 120
           LFLKID ++SSDSESDSDSDS    VP S LFDFF+TTL+SFFYFMSPVFLKSKSQ SPA
Sbjct: 61  LFLKIDCSISSDSESDSDSDS----VPTSNLFDFFQTTLQSFFYFMSPVFLKSKSQKSPA 120

Query: 121 QILRQFHRIQRLQIEFPTKGIEVARAVKWRAEFGETFRSCVILSFQKIRKFDGRAMMVVD 180
           QILRQFHRIQRLQIEFPTKG+EV+RAVKWRAEFG+T RSCVILSFQKIRKFDGRAMM VD
Sbjct: 121 QILRQFHRIQRLQIEFPTKGLEVSRAVKWRAEFGDTLRSCVILSFQKIRKFDGRAMMAVD 180

Query: 181 DFGVDFFPRMEARVTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKN 240
           +FGVDFFP MEARVTWLMRTLITALARHHVM EVV+EHLEM HLVLRD  GNGVVVIEKN
Sbjct: 181 NFGVDFFPGMEARVTWLMRTLITALARHHVMAEVVVEHLEMKHLVLRDGEGNGVVVIEKN 240

Query: 241 GLDDIRRSRVRGGGGETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVV 300
           GL+D RRSRV G GGETSERRT ERRTLRTRVPRTTVRMKYWPLLDLQHG CMEDATLVV
Sbjct: 241 GLEDFRRSRVCGDGGETSERRTAERRTLRTRVPRTTVRMKYWPLLDLQHGFCMEDATLVV 300

Query: 301 VRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGINSF 354
           VRPTGNASEDETADM KEDADLAL AFEDND+YTVAVA LLTKGTR KM INSF
Sbjct: 301 VRPTGNASEDETADMRKEDADLALRAFEDNDVYTVAVAELLTKGTRFKMLINSF 350

[Close]

BLAST of Cp4.1LG11g04330 vs. NCBI nr
Match: XP_022997207.1 (F-box protein At1g78100-like [Cucurbita maxima])

HSP 1 Score: 456 bits (1173), Expect = 7.57e-158
Identity = 245/354 (69.21%), Postives = 283/354 (79.94%), Query Frame = 0


Query: 1   MAEVQEQEASSSIRVAGGGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDS 60
           MAEVQEQ+ASSS R+   GFDSLPDSLVL+IFN V DVK+LIRCRAVSKRFNSLVPHSDS
Sbjct: 1   MAEVQEQDASSSNRIDDDGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHSDS 60

Query: 61  LFLKIDYTVSSDSESDSDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA 120
           LFLKID  +SSDS+SDSDS       PNS LF+FFK+T++SFFYF+S + LKSK Q SPA
Sbjct: 61  LFLKIDCIISSDSDSDSDSG------PNSHLFNFFKSTVKSFFYFISSILLKSKLQKSPA 120

Query: 121 QILRQFHRIQRLQIEFPTKGIEVARAVKWRAEFGETFRSCVILSFQKIRKFDGRAMMVVD 180
           QILRQF+ IQRLQIEFPTK  E+ R VKWRAEFG+  R+CVILSF+KIR  DGR +M VD
Sbjct: 121 QILRQFYWIQRLQIEFPTKDFEIERVVKWRAEFGDALRNCVILSFEKIRNSDGREVMEVD 180

Query: 181 DFGVDFFPRMEARVTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKN 240
                F   M+A+V W+M  L+TA ARHHVM EVV+EHLEM +LVLRD GGNGVVV+E+N
Sbjct: 181 GVDFGFVTGMKAKVLWMMGALMTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVVMEEN 240

Query: 241 GLDDIRRSRVRGGGGETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVV 300
            L+D RRSR+ GGG          R  +RTR+P TTVRMKYWPLL+++ GLCMEDATLVV
Sbjct: 241 SLEDFRRSRMCGGGEAAG------RWQMRTRIPSTTVRMKYWPLLEIRQGLCMEDATLVV 300

Query: 301 VRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGINSF 354
           VRPTGNAS DE+ D+ KEDADLALSAFED+D+YT AVAALLTKG R +  INSF
Sbjct: 301 VRPTGNASIDESTDVEKEDADLALSAFEDDDVYTNAVAALLTKGKRFQFEINSF 342

[Close]

BLAST of Cp4.1LG11g04330 vs. ExPASy TrEMBL
Match: A0A6J1HCC6 (F-box protein At1g78100-like OS=Cucurbita moschata OX=3662 GN=LOC111462793 PE=4 SV=1)

HSP 1 Score: 653 bits (1685), Expect = 6.91e-236
Identity = 342/356 (96.07%), Postives = 346/356 (97.19%), Query Frame = 0


Query: 1   MAEVQEQEASSSIRVAGGGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDS 60
           MAEVQEQEASSSIRVAG GFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDS
Sbjct: 1   MAEVQEQEASSSIRVAGDGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDS 60

Query: 61  LFLKIDYTVSSDSESDSDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA 120
           LFLKIDYTVSSDSESD DSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA
Sbjct: 61  LFLKIDYTVSSDSESDPDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA 120

Query: 121 QILRQFHRIQRLQIEFPTKGIEVARAVKWRAEFGETFRSCVILSFQKIRKFDGRAMMVVD 180
           QILRQFHRIQRLQIEFPTK +EVARAVKWRAEFGET RSCVILSF KIRKFDGRAMM VD
Sbjct: 121 QILRQFHRIQRLQIEFPTKDLEVARAVKWRAEFGETLRSCVILSFHKIRKFDGRAMMAVD 180

Query: 181 DFGVDFFPRMEARVTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKN 240
           DFGV+FFPRMEARVTWLMRTLITALARHHVMVEVV+EHLEMNHLVLRDEGGNGVVVIEKN
Sbjct: 181 DFGVNFFPRMEARVTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRDEGGNGVVVIEKN 240

Query: 241 GLDDIRRSRVRGGG--GETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATL 300
           GLDDIRRSRV GGG  GETSERRT ERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATL
Sbjct: 241 GLDDIRRSRVCGGGDGGETSERRTAERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATL 300

Query: 301 VVVRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGINSF 354
           VVVRPTGNASEDETADMGKEDADLALSAFEDND+YTVAVAALLTKGTRLKMGINSF
Sbjct: 301 VVVRPTGNASEDETADMGKEDADLALSAFEDNDMYTVAVAALLTKGTRLKMGINSF 356

[Close]

BLAST of Cp4.1LG11g04330 vs. ExPASy TrEMBL
Match: A0A6J1KAU0 (F-box protein At1g78100-like OS=Cucurbita maxima OX=3661 GN=LOC111492177 PE=4 SV=1)

HSP 1 Score: 600 bits (1546), Expect = 8.33e-215
Identity = 315/354 (88.98%), Postives = 328/354 (92.66%), Query Frame = 0


Query: 1   MAEVQEQEASSSIRVAGGGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDS 60
           MAEVQEQ+ASSSIRVAG GFDSLPDSLVLVIFNFVSDVK+LIRCRAVSKRFNSLVPHSDS
Sbjct: 1   MAEVQEQDASSSIRVAGDGFDSLPDSLVLVIFNFVSDVKALIRCRAVSKRFNSLVPHSDS 60

Query: 61  LFLKIDYTVSSDSESDSDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA 120
           LFLKID ++SSDSESDSDSDS    VP S LFDFF+TTL+SFFYFMSPVFLKSKSQ SPA
Sbjct: 61  LFLKIDCSISSDSESDSDSDS----VPTSNLFDFFQTTLQSFFYFMSPVFLKSKSQKSPA 120

Query: 121 QILRQFHRIQRLQIEFPTKGIEVARAVKWRAEFGETFRSCVILSFQKIRKFDGRAMMVVD 180
           QILRQFHRIQRLQIEFPTKG+EV+RAVKWRAEFG+T RSCVILSFQKIRKFDGRAMM VD
Sbjct: 121 QILRQFHRIQRLQIEFPTKGLEVSRAVKWRAEFGDTLRSCVILSFQKIRKFDGRAMMAVD 180

Query: 181 DFGVDFFPRMEARVTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKN 240
           +FGVDFFP MEARVTWLMRTLITALARHHVM EVV+EHLEM HLVLRD  GNGVVVIEKN
Sbjct: 181 NFGVDFFPGMEARVTWLMRTLITALARHHVMAEVVVEHLEMKHLVLRDGEGNGVVVIEKN 240

Query: 241 GLDDIRRSRVRGGGGETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVV 300
           GL+D RRSRV G GGETSERRT ERRTLRTRVPRTTVRMKYWPLLDLQHG CMEDATLVV
Sbjct: 241 GLEDFRRSRVCGDGGETSERRTAERRTLRTRVPRTTVRMKYWPLLDLQHGFCMEDATLVV 300

Query: 301 VRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGINSF 354
           VRPTGNASEDETADM KEDADLAL AFEDND+YTVAVA LLTKGTR KM INSF
Sbjct: 301 VRPTGNASEDETADMRKEDADLALRAFEDNDVYTVAVAELLTKGTRFKMLINSF 350

[Close]

BLAST of Cp4.1LG11g04330 vs. ExPASy TrEMBL
Match: A0A6J1K4D8 (F-box protein At1g78100-like OS=Cucurbita maxima OX=3661 GN=LOC111492179 PE=4 SV=1)

HSP 1 Score: 456 bits (1173), Expect = 3.66e-158
Identity = 245/354 (69.21%), Postives = 283/354 (79.94%), Query Frame = 0


Query: 1   MAEVQEQEASSSIRVAGGGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDS 60
           MAEVQEQ+ASSS R+   GFDSLPDSLVL+IFN V DVK+LIRCRAVSKRFNSLVPHSDS
Sbjct: 1   MAEVQEQDASSSNRIDDDGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHSDS 60

Query: 61  LFLKIDYTVSSDSESDSDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA 120
           LFLKID  +SSDS+SDSDS       PNS LF+FFK+T++SFFYF+S + LKSK Q SPA
Sbjct: 61  LFLKIDCIISSDSDSDSDSG------PNSHLFNFFKSTVKSFFYFISSILLKSKLQKSPA 120

Query: 121 QILRQFHRIQRLQIEFPTKGIEVARAVKWRAEFGETFRSCVILSFQKIRKFDGRAMMVVD 180
           QILRQF+ IQRLQIEFPTK  E+ R VKWRAEFG+  R+CVILSF+KIR  DGR +M VD
Sbjct: 121 QILRQFYWIQRLQIEFPTKDFEIERVVKWRAEFGDALRNCVILSFEKIRNSDGREVMEVD 180

Query: 181 DFGVDFFPRMEARVTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKN 240
                F   M+A+V W+M  L+TA ARHHVM EVV+EHLEM +LVLRD GGNGVVV+E+N
Sbjct: 181 GVDFGFVTGMKAKVLWMMGALMTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVVMEEN 240

Query: 241 GLDDIRRSRVRGGGGETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVV 300
            L+D RRSR+ GGG          R  +RTR+P TTVRMKYWPLL+++ GLCMEDATLVV
Sbjct: 241 SLEDFRRSRMCGGGEAAG------RWQMRTRIPSTTVRMKYWPLLEIRQGLCMEDATLVV 300

Query: 301 VRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGINSF 354
           VRPTGNAS DE+ D+ KEDADLALSAFED+D+YT AVAALLTKG R +  INSF
Sbjct: 301 VRPTGNASIDESTDVEKEDADLALSAFEDDDVYTNAVAALLTKGKRFQFEINSF 342

[Close]

BLAST of Cp4.1LG11g04330 vs. ExPASy TrEMBL
Match: A0A6J1HCA7 (F-box protein At1g78100-like OS=Cucurbita moschata OX=3662 GN=LOC111462777 PE=4 SV=1)

HSP 1 Score: 450 bits (1157), Expect = 1.06e-155
Identity = 244/354 (68.93%), Postives = 281/354 (79.38%), Query Frame = 0


Query: 1   MAEVQEQEASSSIRVAGGGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDS 60
           MA VQEQ+ASSS  +   GFDSLPDSLVL+IFN V DVK+LIRCRAVSKRFNSLVPH DS
Sbjct: 1   MAGVQEQDASSSNPIDDDGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHCDS 60

Query: 61  LFLKIDYTVSSDSESDSDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTSPA 120
           LFLKID  +SSD +SDSDSDSD    PNS LF FFK+T++SFFYF+S + LKSK Q SPA
Sbjct: 61  LFLKIDCIISSDFDSDSDSDSD----PNSHLFKFFKSTVKSFFYFISSILLKSKLQKSPA 120

Query: 121 QILRQFHRIQRLQIEFPTKGIEVARAVKWRAEFGETFRSCVILSFQKIRKFDGRAMMVVD 180
           QILRQF+RIQRLQIEFPTK  E+ R VKWRAEFGE  R+CVILSF+KIR  DGR +M VD
Sbjct: 121 QILRQFYRIQRLQIEFPTKDFEIERVVKWRAEFGEALRNCVILSFEKIRNSDGREVMEVD 180

Query: 181 DFGVDFFPRMEARVTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKN 240
                F   M+ARV W+M  L+TA ARHHVM EVV EHLEM +LVLRD GGNGVVV+E+N
Sbjct: 181 GVDYGFVTGMKARVLWMMGALMTASARHHVMAEVVEEHLEMKNLVLRDRGGNGVVVMEEN 240

Query: 241 GLDDIRRSRVRGGGGETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVV 300
           GL+D RRSR+ GGG          R  +RTR+PRTTVRMK WPLL+++ GL MEDATLVV
Sbjct: 241 GLEDFRRSRMCGGGEAAG------RLQMRTRIPRTTVRMKCWPLLEIRQGLYMEDATLVV 300

Query: 301 VRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGINSF 354
           +RPTGNA+ D++ D+ KEDADLALSAFED+D+YT AVAALLTKG R +  INSF
Sbjct: 301 LRPTGNATMDQSTDVEKEDADLALSAFEDDDVYTDAVAALLTKGKRCQFEINSF 344

[Close]

BLAST of Cp4.1LG11g04330 vs. ExPASy TrEMBL
Match: A0A1S3BC00 (F-box protein At1g22220 OS=Cucumis melo OX=3656 GN=LOC103488404 PE=4 SV=1)

HSP 1 Score: 347 bits (891), Expect = 2.86e-115
Identity = 200/362 (55.25%), Postives = 259/362 (71.55%), Query Frame = 0


Query: 1   MAEVQEQEASSSIRVAGG--------GFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFN 60
           MA+ QEQ+ ++S   +          GFDSLPDSL+L+IFN VSDVK+LIRCRAVSKRFN
Sbjct: 1   MAQQQEQQQNASSSSSSSMIHTNDHDGFDSLPDSLILLIFNSVSDVKTLIRCRAVSKRFN 60

Query: 61  SLVPHSDSLFLKIDYTVSSDSESDSDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLK 120
           SLVPHSDSL L +D  +SSDS+SDSDSD       NS L  FFK+ ++SF   +SP+ ++
Sbjct: 61  SLVPHSDSLSLTVDCVISSDSDSDSDSDQ------NSFLLSFFKSVVKSFLDLLSPILVQ 120

Query: 121 SKSQTSPAQILRQFHRIQRLQIEFPTKGIEVARAVKWRAEFGETFRSCVILSFQKIRKFD 180
           S++Q SPAQILRQF +IQ LQIEFPT  ++V R VKWRAEFG+  +SCVIL F++IRK  
Sbjct: 121 SETQNSPAQILRQFLQIQHLQIEFPTTDLKVERVVKWRAEFGDALKSCVILIFREIRK-- 180

Query: 181 GRAMMVVDDFGVDFFPRMEARVTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGN 240
           G       D+ +DF   ++++V   + TLITA ARHHV+ EVV EHLEM  LVLRD GG 
Sbjct: 181 GAIEEDDVDYNLDFIGGLKSKVFMTISTLITASARHHVLGEVVEEHLEMESLVLRDRGGE 240

Query: 241 GVVVIEKNGLDDIRRSRVRGGGGETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLC 300
           GVVV+EK GL+++RR R+ G GGE +E R T     RTRVP TTVRM++   ++++ G+ 
Sbjct: 241 GVVVMEKKGLEELRRWRM-GDGGEVAEWRRT-----RTRVPSTTVRMRHRGRVEVRRGMW 300

Query: 301 MEDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGIN 354
           MEDATLVVVRP+GN  +    D+ KEDA++A+ AFE +D+Y  AV ALL KG R ++ +N
Sbjct: 301 MEDATLVVVRPSGNCRKSGDGDVDKEDAEVAVKAFEGDDVYREAVEALLKKGKRYQLEMN 348

[Close]

BLAST of Cp4.1LG11g04330 vs. TAIR 10
Match: AT1G78100.1 (F-box family protein )

HSP 1 Score: 198.7 bits (504), Expect = 7.6e-51
Identity = 135/351 (38.46%), Postives = 205/351 (58.40%), Query Frame = 0


Query: 20  FDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDSDS 79
           FD++PD +V+ I N V DVK+LIRCR+VSKRFNSL   S+SL L++D  + + +ESDS+ 
Sbjct: 4   FDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGA-TESDSEI 63

Query: 80  DSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLK--------SKSQTSPAQILRQFHRIQR 139
           D        S +  FF++  +S    + P+F K        ++S  +PAQIL  F RI+ 
Sbjct: 64  D--------SPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRN 123

Query: 140 LQIEFPTKGIEVAR--AVKWRAEFGETFRSCVILSFQKI---RKFDGRAMMVVD---DFG 199
           L++E     +++ +  AVKW+AEFG+T +SCVI++F+           A  VVD   +  
Sbjct: 124 LEVELYGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATEAAAVVDGVVESD 183

Query: 200 VDFFPRMEARVTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKNGLD 259
            +F   ++ RV W +  L+ A  RH++M ++V +H EM  L++RD  G G VV++  G+ 
Sbjct: 184 SEFVCGLKTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVRDSDGEGTVVMDAAGMK 243

Query: 260 DIRRSRVRGGGGETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVVVRP 319
           + R + VRG      + + +ER   RT VP   + M++ P L L+ G+C+E ATLVVVRP
Sbjct: 244 EYRETEVRG------DNKESERVGERTVVPSVRMSMRHAPSLMLKSGICLEAATLVVVRP 303

Query: 320 TGNASEDETADMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGINSF 355
           TG AS+D   ++  E    A +   D+ +Y  AV ALL K  R  + +NSF
Sbjct: 304 TGVASDDNDVELVTE----AFAGDGDDCMYGEAVTALL-KRRRNVLEMNSF 334

[Close]

BLAST of Cp4.1LG11g04330 vs. TAIR 10
Match: AT1G22220.1 (F-box family protein )

HSP 1 Score: 186.8 bits (473), Expect = 3.0e-47
Identity = 126/341 (36.95%), Postives = 197/341 (57.77%), Query Frame = 0


Query: 20  FDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDSDS 79
           FD LPD +++ I N V DVK+L+RC ++SKRFNSLVP S+SL L++D++V          
Sbjct: 4   FDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSV---------- 63

Query: 80  DSDSDYVPNSKLFDFFKTTLESFFYFMS----PVFLKSKSQTSPAQILRQFHRIQRLQIE 139
            SDS  V +      F++        +S    P+ + + S + P +IL +F RI+ L +E
Sbjct: 64  -SDSPVVTS-----IFRSLFNGLVSLLSKPAKPITITTLSPSLPFKILSRFDRIRNLDVE 123

Query: 140 FPTKGIEVAR--AVKWRAEFGETFRSCVILSFQKIRKFDGRAMMVVDDFGVDFFPRMEAR 199
            P   +++ +  AVKW+AEFG+T +SCVI++F+         + V  +   +F   ++ R
Sbjct: 124 LPGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSAGTVSS-PVAVEGESDAEFVTGLKTR 183

Query: 200 VTWLMRTLITALARHHVMVEVVLEHLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVRGG 259
           V W +  L+ A +RH++M EVV EH E+  LV+RD+   G VV+ + GL ++R +  R  
Sbjct: 184 VVWTISALMAASSRHYLMREVVKEHEEIESLVMRDKEREGTVVMNEEGLKELRNTEAR-- 243

Query: 260 GGETSERRTTERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVVVRPTGNASEDETA 319
             E  ER    +R++   VP   + M++ P L L+ G+C+E ATLV+VRP+G  ++ E  
Sbjct: 244 -VEDEERVVKNKRSV---VPSVRMSMRHAPSLKLKSGICLESATLVIVRPSG--ADFEVG 303

Query: 320 DMGKEDADLALSAFEDNDLYTVAVAALLTKGTRLKMGINSF 355
           D    DA+LA  AF  + +Y  AV ALL K  +  + +NSF
Sbjct: 304 D----DAELATEAFVGDCMYGEAVVALL-KCKKNALEMNSF 314

[Close]

BLAST of Cp4.1LG11g04330 vs. TAIR 10
Match: AT4G18380.1 (F-box family protein )

HSP 1 Score: 144.1 bits (362), Expect = 2.2e-34
Identity = 117/377 (31.03%), Postives = 187/377 (49.60%), Query Frame = 0


Query: 20  FDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDSDS 79
           FD+LPDS++L+IFN + DVK+L RC  VSKRF+SL+P  +++F+++D  +S D  S   S
Sbjct: 25  FDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDDDSSSLLS 84

Query: 80  D---SDSDYVPNSKLFDFFKTTLESFFYFM------------SPVFL------------K 139
           D   S S   P S +F      L++   F+            SP  L             
Sbjct: 85  DKPRSASAASPFSAIFRLVFKPLQALGQFLKRSGSSSLPSGSSPSSLLISGGDDGEIEQG 144

Query: 140 SKSQTSPAQILRQFHRIQRLQIEFPT--KGIEVARAVKWRAEFGETFRSCVILSFQKI-- 199
             +  SP Q+L+ F  I+ L+IE P+   GI+    +KWRAEFG T  +CVIL    +  
Sbjct: 145 GVTHHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLENCVILGASSVIP 204

Query: 200 ------RKFDGRAMMVVDDFG---VDFFPR--MEARVTWLMRTLITALARHHVMVEVVLE 259
                  +     +  V+D G     F+    ++ RV W + +LI A ARH+++  ++ E
Sbjct: 205 PTNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAE 264

Query: 260 HLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVRGGGGETSERRTTERRTLRTRVPRTTV 319
           H  ++ LVL D  G GV+ + ++ L+++R   +           +    + RT VP   +
Sbjct: 265 HKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPL-----------SASSASKRTLVPALNM 324

Query: 320 RMKYWPLLDLQHGLCMEDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAV 355
           R+ Y P L+L  G  ++ ATLV +RP         ++  KE  D++  +   ++ Y VA 
Sbjct: 325 RLWYAPSLELPDGTVLKGATLVAIRP---------SESKKEVCDVSWVSSAFDEPYGVA- 380

[Close]

BLAST of Cp4.1LG11g04330 vs. TAIR 10
Match: AT4G18380.2 (F-box family protein )

HSP 1 Score: 144.1 bits (362), Expect = 2.2e-34
Identity = 117/377 (31.03%), Postives = 187/377 (49.60%), Query Frame = 0


Query: 20  FDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDSDS 79
           FD+LPDS++L+IFN + DVK+L RC  VSKRF+SL+P  +++F+++D  +S D  S   S
Sbjct: 25  FDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDDDSSSLLS 84

Query: 80  D---SDSDYVPNSKLFDFFKTTLESFFYFM------------SPVFL------------K 139
           D   S S   P S +F      L++   F+            SP  L             
Sbjct: 85  DKPRSASAASPFSAIFRLVFKPLQALGQFLKRSGSSSLPSGSSPSSLLISGGDDGEIEQG 144

Query: 140 SKSQTSPAQILRQFHRIQRLQIEFPT--KGIEVARAVKWRAEFGETFRSCVILSFQKI-- 199
             +  SP Q+L+ F  I+ L+IE P+   GI+    +KWRAEFG T  +CVIL    +  
Sbjct: 145 GVTHHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLENCVILGASSVIP 204

Query: 200 ------RKFDGRAMMVVDDFG---VDFFPR--MEARVTWLMRTLITALARHHVMVEVVLE 259
                  +     +  V+D G     F+    ++ RV W + +LI A ARH+++  ++ E
Sbjct: 205 PTNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAE 264

Query: 260 HLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVRGGGGETSERRTTERRTLRTRVPRTTV 319
           H  ++ LVL D  G GV+ + ++ L+++R   +           +    + RT VP   +
Sbjct: 265 HKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPL-----------SASSASKRTLVPALNM 324

Query: 320 RMKYWPLLDLQHGLCMEDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAV 355
           R+ Y P L+L  G  ++ ATLV +RP         ++  KE  D++  +   ++ Y VA 
Sbjct: 325 RLWYAPSLELPDGTVLKGATLVAIRP---------SESKKEVCDVSWVSSAFDEPYGVA- 380

[Close]

BLAST of Cp4.1LG11g04330 vs. TAIR 10
Match: AT1G30200.2 (F-box family protein )

HSP 1 Score: 137.1 bits (344), Expect = 2.7e-32
Identity = 116/375 (30.93%), Postives = 178/375 (47.47%), Query Frame = 0


Query: 20  FDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDSD- 79
           FD LPDSL+L+IF+ V+DVK L RC  VS+RF+SLVP  +++ +++D  +S D  S SD 
Sbjct: 26  FDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSSDE 85

Query: 80  -----------SDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQT---------- 139
                      SD+       S LF      +   F  +  +    +S +          
Sbjct: 86  NHRFSLNTASISDAGGAGGSFSALFRLVFAPIFKPFQMLGQILGPKRSSSSFDASFSAIN 145

Query: 140 --------SPAQILRQFHRIQRLQIEFPT--KGIEVARAVKWRAEFGETFRSCVILSFQK 199
                   SP Q+L+ F  I+ L+IE PT   GIE    +KWRA+FG T  +C+IL    
Sbjct: 146 DEIGVTHHSPTQVLKNFGEIRFLKIELPTGELGIEDGILLKWRADFGSTLDNCMILGASS 205

Query: 200 I---RKFDGRAMMVVDDFG---VDFFPR--MEARVTWLMRTLITALARHHVMVEVVLEHL 259
           +            V +D G     F+    ++ RV W + +LI A ARH+++  ++ EH 
Sbjct: 206 VIQSNSVKNHENSVDEDNGNIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIINEHK 265

Query: 260 EMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVRGGGGETSERRTTERRTLRTRVPRTTVRM 319
            ++ LVL D  G GV+ + +  L+++R + +           +    + RT VP   +R+
Sbjct: 266 SLDRLVLSDADGQGVLCMNREQLEELRVTPL-----------SASSASKRTLVPALNMRL 325

Query: 320 KYWPLLDLQHGLCMEDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDLYTVAVAA 355
            Y P LDL  G  ++ ATLV +RP+ +  E         DA     AFE+       VA 
Sbjct: 326 WYAPELDLPDGTVLKGATLVAIRPSESKKE-------VCDASWLSDAFEEP---FGTVAK 379

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g04330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9S2	1.1e-49	38.46	F-box protein AUF1 OS=Arabidopsis thaliana OX=3702 GN=AUF1 PE=1 SV=1	[more]
Q9LM18	4.2e-46	36.95	F-box protein AUF2 OS=Arabidopsis thaliana OX=3702 GN=AUF2 PE=2 SV=1	[more]
O49508	3.1e-33	31.03	F-box protein At4g18380 OS=Arabidopsis thaliana OX=3702 GN=At4g18380 PE=2 SV=1	[more]
Q9C534	3.8e-31	30.93	F-box protein At1g30200 OS=Arabidopsis thaliana OX=3702 GN=At1g30200 PE=2 SV=1	[more]
Q9FNK5	3.6e-29	28.46	F-box protein At5g46170 OS=Arabidopsis thaliana OX=3702 GN=At5g46170 PE=2 SV=1	[more]

BLAST of Cp4.1LG11g04330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546363.1	1.41e-246	100.00	F-box protein At1g78100-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962302.1	1.43e-235	96.07	F-box protein At1g78100-like [Cucurbita moschata]	[more]
KAG6598678.1	2.01e-233	94.96	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022997204.1	1.72e-214	88.98	F-box protein At1g78100-like [Cucurbita maxima]	[more]
XP_022997207.1	7.57e-158	69.21	F-box protein At1g78100-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG11g04330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCC6	6.91e-236	96.07	F-box protein At1g78100-like OS=Cucurbita moschata OX=3662 GN=LOC111462793 PE=4 ...	[more]
A0A6J1KAU0	8.33e-215	88.98	F-box protein At1g78100-like OS=Cucurbita maxima OX=3661 GN=LOC111492177 PE=4 SV...	[more]
A0A6J1K4D8	3.66e-158	69.21	F-box protein At1g78100-like OS=Cucurbita maxima OX=3661 GN=LOC111492179 PE=4 SV...	[more]
A0A6J1HCA7	1.06e-155	68.93	F-box protein At1g78100-like OS=Cucurbita moschata OX=3662 GN=LOC111462777 PE=4 ...	[more]
A0A1S3BC00	2.86e-115	55.25	F-box protein At1g22220 OS=Cucumis melo OX=3656 GN=LOC103488404 PE=4 SV=1	[more]

BLAST of Cp4.1LG11g04330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78100.1	7.6e-51	38.46	F-box family protein	[more]
AT1G22220.1	3.0e-47	36.95	F-box family protein	[more]
AT4G18380.1	2.2e-34	31.03	F-box family protein	[more]
AT4G18380.2	2.2e-34	31.03	F-box family protein	[more]
AT1G30200.2	2.7e-32	30.93	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 23..64 e-value: 2.9E-4 score: 30.1
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 21..61 e-value: 4.5E-6 score: 26.4
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 17..65 score: 8.888098
None	No IPR available	GENE3D	1.20.1280.50		coord: 17..66 e-value: 5.8E-8 score: 34.5
None	No IPR available	PANTHER	PTHR31215:SF32	BNAA07G10620D PROTEIN	coord: 18..354
IPR044809	F-box protein AUF1-like	PANTHER	PTHR31215	OS05G0510400 PROTEIN-RELATED	coord: 18..354
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 16..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g04330.1	Cp4.1LG11g04330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding