Cp4.1LG11g03910 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG11g03910
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCp4.1LG11: 2102419 .. 2105030 (-)
RNA-Seq ExpressionCp4.1LG11g03910
SyntenyCp4.1LG11g03910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCTCTATATGCCCTTGTTTAAGTGCAGCACCACCTTGAGAACGCTCACTCAACTCCATGCCCACCTCCTCGTTACTGCCCTTCATAAAGACGCACTTGCTTCCACAAAGCTCATCGAATCATATTCCCAAATGGGCGATCTTCAAGCTTCAAAATCTGTCTTCCGCAGCTTCCACTCTCCCGATTCCTTCATGTGGGGCGTGCTTCTTAAATCCCATGTCTGGAGCGGCTCTTACGAGGAAGCCATTAATCTCTATCACCAAATGTTATGCCAACAAATTCAGTTTAATGCCTACACATTCCCGTCCGTTTTGAGAGCTTGTTCTGGGTTTGGCGATCTGAGTGTTGGCGAAAGGGTTCATGGAAGAGTTATCAAATCTGGGTTTGATATGGATCCTGTTGTGGAAACCTCGTTGCTTAGTATGTACGGGGAGTTGGGGTACTTAGACAGTGCTTGCAAGGTGTTTGATGAAATGCCACTGAGAGATTTGGTGTCTTGGAGTTCCATTATTTCGTGTAATGTTGGGAATGGAAAGATAATTGAAGGTTTGGATACTTTTCGTTGTATGGTTTCTGAAGGTGTGGCACCGGATTCTGTTTCGATACTCACTGTGGCTGAGGCTTGTGGTGAATTGGGAGTTTTGAGGCTGGCAATGTCTGTTCATGGCTATATCTTGAGAATGGGAATGGAAAGTGATAGGTCTTTGGATAGTTCGTTGATTTTTATGTATGCTAAATGTGGTAGCTTACACAGTGCAGAGATTTTATTTGAGAATGTTACTCACCATAGCACTTCTACTTGGACTGCAATGATCTCCAGCTATAACCAAGGTGGTTACTTCCAGGAAGCATTAGCTGTGTTCGCTTCGATGCGAAACACTGATGTTGAACCAAATTCTGTGACTATGATGGTTATTCTACGTTCTTGTACTAATTTGGGTCTTCTGAGAGAAGGGAAATCTGTTCATTGTGTTGTCATAAAGAACGAATTAGACACTAACCTTGATTGTCTAGGACCGACTTTGCTCGAACTGTACGCCGGGGCTGCAAAACACGATCACTGTGAGAAGATACTTCATGAAGTTGGAGGGAGAGGGATTGTCGTTTGGAATACGCTCATTTCGGTTTATGCTCAAAAGGGGTTGTTGAAGGAGGCACTTGTTCTCTTTGTGAGGATGCAGAAACAAGGGCTTATGCCCGACTCGTTCAGCCTGGCGAGCTCTCTTTCTGCTTCTGGAAATGAAGGTATGTTTCAACTGGGACTGCAAATACATGGTCATGTTATCAAGAGGCCTTTCATGGATGAATATGTTCTGAATGCACTAATAGATATGTACTCAAAATGTGGCTTTGTAGACTTAGCATACATGATATTTGATAAGATGGAACCAAAAGGTGTTGTGACATGGAATTCTATGATCTGTGGGTTATCTCAGAATGGTTACTCGACTAAAGCTATCAGTTTATTTGATCTAATGTATTTGACCTGTCTCGAGATTGGGGATGTTGCCTTCGTTAGTGTGATTCAAGCCTGCACCCATTTGGGTTTTCTAGAGAAAGGGAAATGGATCCACCACAAGGTTATCACCTTTGGTGTTAGAAAAGATCTTTATATTGAAACAGCTCTAGTTGACATGTATGCAAAGTGTGGAGACCTCCAAACGGCGAGGCGAGTTTTCGACAATATGTCGGAGAGGAGCCTAGTGTCATGGAGCACTCTTCTTTCCAGCTATGGTGTGCATGGTCAGATTAGTGAGGTTATCTTCCTCTTTTCGAAAATGCTTGAATCAGGAATTAAACCTAATGATGTTACTGTCATGAATGTTCTTTCAGCTTGTAGTCATGCTGGTTGTGTAAAAGAAGGGATGCTCTTCTTCAGCTCCGTTCGGGATTTTGGAATTGAGCCCAAAATCGAACACTTTGCTTGCATAGTCGATCTTCTTAGTCGTGCAGGTGACCTTGATGGAGCATACAAAATAATCAAATCAATGCCATTTCCAGCAGGTGCTAGCATCTGGGGTTCTCTGCTAAATGGTTGCCGAATCCACCAGAGATTGGACATAGCTAAGAACATCCGAAGCGAACTGTTGAACATTCAAACAGATGATACTGGATATTATACATTGTTATCAAATATATACGCAGAAGGGGGAGAATGGAACGAGTTTCGGAAAGTTAGGTTGATGATGAAGTGTACAGGGCTGAAAAAGGTTCCTGCATACAGTGTAATTCAGCTTGGTAAGAAAGCTTACAGATTTGGAGCTGGAGATGCCTCTCACTCTCAAACAAAGGATACACATAGATATATAGATAACTTTCAGAGATTTTCTCAGGAAGAAGTTAATAATGTACAGCCACATTGTTCATCGTATGATACGAGTTCTTATTCAGAATACAACGATTCGTCATCTTATTCTATAGTTTAGACACCTTCATTGTTCTTATTCCTCGACTCCCCGGGTTTCCGAGCATAATCAATCTCAAAAGAGTACAAACCTTGAGATTCAATGGAATAATGGCTTATTCCAAGCCGTTCTATCGTGTCGACAAGGTAGATAAGTTTATCAGGTCCCTACTGATACCATCTGTGGAGGGTATTCTTTCCTGA

mRNA sequence

ATGGGGCTCTATATGCCCTTGTTTAAGTGCAGCACCACCTTGAGAACGCTCACTCAACTCCATGCCCACCTCCTCGTTACTGCCCTTCATAAAGACGCACTTGCTTCCACAAAGCTCATCGAATCATATTCCCAAATGGGCGATCTTCAAGCTTCAAAATCTGTCTTCCGCAGCTTCCACTCTCCCGATTCCTTCATGTGGGGCGTGCTTCTTAAATCCCATGTCTGGAGCGGCTCTTACGAGGAAGCCATTAATCTCTATCACCAAATGTTATGCCAACAAATTCAGTTTAATGCCTACACATTCCCGTCCGTTTTGAGAGCTTGTTCTGGGTTTGGCGATCTGAGTGTTGGCGAAAGGGTTCATGGAAGAGTTATCAAATCTGGGTTTGATATGGATCCTGTTGTGGAAACCTCGTTGCTTAGTATGTACGGGGAGTTGGGGTACTTAGACAGTGCTTGCAAGGTGTTTGATGAAATGCCACTGAGAGATTTGGTGTCTTGGAGTTCCATTATTTCGTGTAATGTTGGGAATGGAAAGATAATTGAAGGTTTGGATACTTTTCGTTGTATGGTTTCTGAAGGTGTGGCACCGGATTCTGTTTCGATACTCACTGTGGCTGAGGCTTGTGGTGAATTGGGAGTTTTGAGGCTGGCAATGTCTGTTCATGGCTATATCTTGAGAATGGGAATGGAAAGTGATAGGTCTTTGGATAGTTCGTTGATTTTTATGTATGCTAAATGTGGTAGCTTACACAGTGCAGAGATTTTATTTGAGAATGTTACTCACCATAGCACTTCTACTTGGACTGCAATGATCTCCAGCTATAACCAAGGTGGTTACTTCCAGGAAGCATTAGCTGTGTTCGCTTCGATGCGAAACACTGATGTTGAACCAAATTCTGTGACTATGATGGTTATTCTACGTTCTTGTACTAATTTGGGTCTTCTGAGAGAAGGGAAATCTGTTCATTGTGTTGTCATAAAGAACGAATTAGACACTAACCTTGATTGTCTAGGACCGACTTTGCTCGAACTGTACGCCGGGGCTGCAAAACACGATCACTGTGAGAAGATACTTCATGAAGTTGGAGGGAGAGGGATTGTCGTTTGGAATACGCTCATTTCGGTTTATGCTCAAAAGGGGTTGTTGAAGGAGGCACTTGTTCTCTTTGTGAGGATGCAGAAACAAGGGCTTATGCCCGACTCGTTCAGCCTGGCGAGCTCTCTTTCTGCTTCTGGAAATGAAGGTATGTTTCAACTGGGACTGCAAATACATGGTCATGTTATCAAGAGGCCTTTCATGGATGAATATGTTCTGAATGCACTAATAGATATGTACTCAAAATGTGGCTTTGTAGACTTAGCATACATGATATTTGATAAGATGGAACCAAAAGGTGTTGTGACATGGAATTCTATGATCTGTGGGTTATCTCAGAATGGTTACTCGACTAAAGCTATCAGTTTATTTGATCTAATTTTAGACACCTTCATTGTTCTTATTCCTCGACTCCCCGGGTTTCCGAGCATAATCAATCTCAAAAGAGTACAAACCTTGAGATTCAATGGAATAATGGCTTATTCCAAGCCGTTCTATCGTGTCGACAAGGTAGATAAGTTTATCAGGTCCCTACTGATACCATCTGTGGAGGGTATTCTTTCCTGA

Coding sequence (CDS)

ATGGGGCTCTATATGCCCTTGTTTAAGTGCAGCACCACCTTGAGAACGCTCACTCAACTCCATGCCCACCTCCTCGTTACTGCCCTTCATAAAGACGCACTTGCTTCCACAAAGCTCATCGAATCATATTCCCAAATGGGCGATCTTCAAGCTTCAAAATCTGTCTTCCGCAGCTTCCACTCTCCCGATTCCTTCATGTGGGGCGTGCTTCTTAAATCCCATGTCTGGAGCGGCTCTTACGAGGAAGCCATTAATCTCTATCACCAAATGTTATGCCAACAAATTCAGTTTAATGCCTACACATTCCCGTCCGTTTTGAGAGCTTGTTCTGGGTTTGGCGATCTGAGTGTTGGCGAAAGGGTTCATGGAAGAGTTATCAAATCTGGGTTTGATATGGATCCTGTTGTGGAAACCTCGTTGCTTAGTATGTACGGGGAGTTGGGGTACTTAGACAGTGCTTGCAAGGTGTTTGATGAAATGCCACTGAGAGATTTGGTGTCTTGGAGTTCCATTATTTCGTGTAATGTTGGGAATGGAAAGATAATTGAAGGTTTGGATACTTTTCGTTGTATGGTTTCTGAAGGTGTGGCACCGGATTCTGTTTCGATACTCACTGTGGCTGAGGCTTGTGGTGAATTGGGAGTTTTGAGGCTGGCAATGTCTGTTCATGGCTATATCTTGAGAATGGGAATGGAAAGTGATAGGTCTTTGGATAGTTCGTTGATTTTTATGTATGCTAAATGTGGTAGCTTACACAGTGCAGAGATTTTATTTGAGAATGTTACTCACCATAGCACTTCTACTTGGACTGCAATGATCTCCAGCTATAACCAAGGTGGTTACTTCCAGGAAGCATTAGCTGTGTTCGCTTCGATGCGAAACACTGATGTTGAACCAAATTCTGTGACTATGATGGTTATTCTACGTTCTTGTACTAATTTGGGTCTTCTGAGAGAAGGGAAATCTGTTCATTGTGTTGTCATAAAGAACGAATTAGACACTAACCTTGATTGTCTAGGACCGACTTTGCTCGAACTGTACGCCGGGGCTGCAAAACACGATCACTGTGAGAAGATACTTCATGAAGTTGGAGGGAGAGGGATTGTCGTTTGGAATACGCTCATTTCGGTTTATGCTCAAAAGGGGTTGTTGAAGGAGGCACTTGTTCTCTTTGTGAGGATGCAGAAACAAGGGCTTATGCCCGACTCGTTCAGCCTGGCGAGCTCTCTTTCTGCTTCTGGAAATGAAGGTATGTTTCAACTGGGACTGCAAATACATGGTCATGTTATCAAGAGGCCTTTCATGGATGAATATGTTCTGAATGCACTAATAGATATGTACTCAAAATGTGGCTTTGTAGACTTAGCATACATGATATTTGATAAGATGGAACCAAAAGGTGTTGTGACATGGAATTCTATGATCTGTGGGTTATCTCAGAATGGTTACTCGACTAAAGCTATCAGTTTATTTGATCTAATTTTAGACACCTTCATTGTTCTTATTCCTCGACTCCCCGGGTTTCCGAGCATAATCAATCTCAAAAGAGTACAAACCTTGAGATTCAATGGAATAATGGCTTATTCCAAGCCGTTCTATCGTGTCGACAAGGTAGATAAGTTTATCAGGTCCCTACTGATACCATCTGTGGAGGGTATTCTTTCCTGA

Protein sequence

MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFHSPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGERVHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGKIIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSSLIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPNSVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKILHEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQLGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQNGYSTKAISLFDLILDTFIVLIPRLPGFPSIINLKRVQTLRFNGIMAYSKPFYRVDKVDKFIRSLLIPSVEGILS
Homology
BLAST of Cp4.1LG11g03910 vs. ExPASy Swiss-Prot
Match: Q9C507 (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E66 PE=3 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 1.3e-142
Identity = 257/501 (51.30%), Postives = 355/501 (70.86%), Query Frame = 0

Query: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTA-LHKDALASTKLIESYSQMGDLQASKSVFRSF 60
           M  YMPLF+  ++LR ++QLHAHLLVT  L +D L  TKLIESY+ MG   +S+ VF +F
Sbjct: 1   MTQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF 60

Query: 61  HSPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGD-LSVG 120
             PDSFM+GVL+K +VW    + AI+LYH+++ +  Q + + FPSVLRAC+G  + LSVG
Sbjct: 61  PYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVG 120

Query: 121 ERVHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGN 180
            +VHGR+IK G D D V+ETSLL MYG+ G L  A KVFD MP+RDLV+WS+++S  + N
Sbjct: 121 GKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN 180

Query: 181 GKIIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLD 240
           G++++ L  F+CMV +GV PD+V++++V E C ELG LR+A SVHG I R   + D +L 
Sbjct: 181 GEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLC 240

Query: 241 SSLIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVE 300
           +SL+ MY+KCG L S+E +FE +   +  +WTAMISSYN+G + ++AL  F+ M  + +E
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 300

Query: 301 PNSVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEK 360
           PN VT+  +L SC  +GL+REGKSVH   ++ ELD N + L   L+ELYA   K   CE 
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 360

Query: 361 ILHEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGM 420
           +L  V  R IV WN+LIS+YA +G++ +AL LF +M  Q + PD+F+LASS+SA  N G+
Sbjct: 361 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL 420

Query: 421 FQLGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGL 480
             LG QIHGHVI+    DE+V N+LIDMYSK G VD A  +F++++ + VVTWNSM+CG 
Sbjct: 421 VPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGF 480

Query: 481 SQNGYSTKAISLFDLILDTFI 500
           SQNG S +AISLFD +  +++
Sbjct: 481 SQNGNSVEAISLFDYMYHSYL 501

BLAST of Cp4.1LG11g03910 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.4e-72
Identity = 152/488 (31.15%), Postives = 268/488 (54.92%), Query Frame = 0

Query: 7   LFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFHSPDSFM 66
           L +CS +L+ L Q+   +    L+++    TKL+  + + G +  +  VF    S  + +
Sbjct: 44  LERCS-SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 103

Query: 67  WGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGERVHGRVI 126
           +  +LK        ++A+  + +M    ++   Y F  +L+ C    +L VG+ +HG ++
Sbjct: 104 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 163

Query: 127 KSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGKIIEGLD 186
           KSGF +D    T L +MY +   ++ A KVFD MP RDLVSW++I++    NG     L+
Sbjct: 164 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 223

Query: 187 TFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSSLIFMYA 246
             + M  E + P  ++I++V  A   L ++ +   +HGY +R G +S  ++ ++L+ MYA
Sbjct: 224 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA 283

Query: 247 KCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPNSVTMMV 306
           KCGSL +A  LF+ +   +  +W +MI +Y Q    +EA+ +F  M +  V+P  V++M 
Sbjct: 284 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 343

Query: 307 ILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKILHEVGGR 366
            L +C +LG L  G+ +H + ++  LD N+  +  +L+ +Y    + D    +  ++  R
Sbjct: 344 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVN-SLISMYCKCKEVDTAASMFGKLQSR 403

Query: 367 GIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQLGLQIH 426
            +V WN +I  +AQ G   +AL  F +M+ + + PD+F+  S ++A     +      IH
Sbjct: 404 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 463

Query: 427 GHVIKRPFMDE--YVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQNGYS 486
           G V+ R  +D+  +V  AL+DMY+KCG + +A +IFD M  + V TWN+MI G   +G+ 
Sbjct: 464 G-VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 523

Query: 487 TKAISLFD 493
             A+ LF+
Sbjct: 524 KAALELFE 528

BLAST of Cp4.1LG11g03910 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.1e-72
Identity = 150/463 (32.40%), Postives = 258/463 (55.72%), Query Frame = 0

Query: 32  DALASTKLIESYSQMGDLQASKSVFRSFHSPDSFMWGVLLKSHVWSGSYEEAINLYHQML 91
           D+   +KL   Y+  GDL+ +  VF       +  W +L+     SG +  +I L+ +M+
Sbjct: 128 DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187

Query: 92  CQQIQFNAYTFPSVLRACSGFGDLSVGERVHGRVIKSGFDMDPVVETSLLSMYGELGYLD 151
              ++ ++YTF  V ++ S    +  GE++HG ++KSGF     V  SL++ Y +   +D
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD 247

Query: 152 SACKVFDEMPLRDLVSWSSIISCNVGNGKIIEGLDTFRCMVSEGVAPDSVSILTVAEACG 211
           SA KVFDEM  RD++SW+SII+  V NG   +GL  F  M+  G+  D  +I++V   C 
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307

Query: 212 ELGVLRLAMSVHGYILRMGMESDRSLDSSLIFMYAKCGSLHSAEILFENVTHHSTSTWTA 271
           +  ++ L  +VH   ++     +    ++L+ MY+KCG L SA+ +F  ++  S  ++T+
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367

Query: 272 MISSYNQGGYFQEALAVFASMRNTDVEPNSVTMMVILRSCTNLGLLREGKSVHCVVIKNE 331
           MI+ Y + G   EA+ +F  M    + P+  T+  +L  C    LL EGK VH  + +N+
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427

Query: 332 LDTNLDCLGPTLLELYAGAAKHDHCEKILHEVGGRGIVVWNTLISVYAQKGLLKEALVLF 391
           L  ++  +   L+++YA        E +  E+  + I+ WNT+I  Y++     EAL LF
Sbjct: 428 LGFDI-FVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF 487

Query: 392 -VRMQKQGLMPDSFSLASSLSASGNEGMFQLGLQIHGHVIKRP-FMDEYVLNALIDMYSK 451
            + ++++   PD  ++A  L A  +   F  G +IHG++++   F D +V N+L+DMY+K
Sbjct: 488 NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAK 547

Query: 452 CGFVDLAYMIFDKMEPKGVVTWNSMICGLSQNGYSTKAISLFD 493
           CG + LA+M+FD +  K +V+W  MI G   +G+  +AI+LF+
Sbjct: 548 CGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN 589

BLAST of Cp4.1LG11g03910 vs. ExPASy Swiss-Prot
Match: Q9M9E2 (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.2e-69
Identity = 148/452 (32.74%), Postives = 244/452 (53.98%), Query Frame = 0

Query: 43  YSQMGDLQASKSVFRSFHSPDSFMWGVLLKSHVWSGSYEEAINLYHQML-CQQIQFNAYT 102
           + + G+L  +  VF      + F W VL+  +   G ++EA+ LYH+ML    ++ + YT
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198

Query: 103 FPSVLRACSGFGDLSVGERVHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMP 162
           FP VLR C G  DL+ G+ VH  V++ G+++D  V  +L++MY + G + SA  +FD MP
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258

Query: 163 LRDLVSWSSIISCNVGNGKIIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMS 222
            RD++SW+++IS    NG   EGL+ F  M    V PD +++ +V  AC  LG  RL   
Sbjct: 259 RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318

Query: 223 VHGYILRMGMESDRSLDSSLIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGY 282
           +H Y++  G   D S+ +SL  MY   GS   AE LF  +      +WT MIS Y     
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFL 378

Query: 283 FQEALAVFASMRNTDVEPNSVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGP 342
             +A+  +  M    V+P+ +T+  +L +C  LG L  G  +H + IK  L + +  +  
Sbjct: 379 PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV-IVAN 438

Query: 343 TLLELYAGAAKHDHCEKILHEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMP 402
            L+ +Y+     D    I H +  + ++ W ++I+         EAL+ F+R  K  L P
Sbjct: 439 NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI-FLRQMKMTLQP 498

Query: 403 DSFSLASSLSASGNEGMFQLGLQIHGHVIKRPF-MDEYVLNALIDMYSKCGFVDLAYMIF 462
           ++ +L ++L+A    G    G +IH HV++    +D+++ NAL+DMY +CG ++ A+  F
Sbjct: 499 NAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF 558

Query: 463 DKMEPKGVVTWNSMICGLSQNGYSTKAISLFD 493
           +  + K V +WN ++ G S+ G  +  + LFD
Sbjct: 559 NS-QKKDVTSWNILLTGYSERGQGSMVVELFD 587

BLAST of Cp4.1LG11g03910 vs. ExPASy Swiss-Prot
Match: Q7XJN6 (Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E26 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 9.8e-66
Identity = 152/478 (31.80%), Postives = 247/478 (51.67%), Query Frame = 0

Query: 19  QLHAHLLVTALHKDALASTKLIESYSQMG-DLQASKSVFRSFHSPDSFMWGVLLKSHVWS 78
           Q+H  +L  +L  D+   T LI+ Y + G  + A +         +  +W V++     S
Sbjct: 191 QIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGS 250

Query: 79  GSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGERVHGRVIKSGFDMDPVVE 138
           G  E +++LY       ++  + +F   L ACS   +   G ++H  V+K G   DP V 
Sbjct: 251 GICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVC 310

Query: 139 TSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGKIIEGLDTFRCMVSEGVA 198
           TSLLSMY + G +  A  VF  +  + L  W+++++    N      LD F  M  + V 
Sbjct: 311 TSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL 370

Query: 199 PDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSSLIFMYAKCGSLHSAEIL 258
           PDS ++  V   C  LG+     SVH  + +  ++S  +++S+L+ +Y+KCG    A ++
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLV 430

Query: 259 FENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTD--VEPNSVTMMVILRSCTNLG 318
           F+++       W ++IS   + G F+EAL VF  M++ D  ++P+S  M  +  +C  L 
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLE 490

Query: 319 LLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKILHEVGGRGIVVWNTLI 378
            LR G  VH  +IK  L  N+  +G +L++LY+     +   K+   +    +V WN++I
Sbjct: 491 ALRFGLQVHGSMIKTGLVLNV-FVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMI 550

Query: 379 SVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQLGLQIHGHVIKRPF- 438
           S Y++  L + ++ LF  M  QG+ PDS S+ S L A  +      G  +HG+ ++    
Sbjct: 551 SCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIP 610

Query: 439 MDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQNGYSTKAISLFD 493
            D ++ NALIDMY KCGF   A  IF KM+ K ++TWN MI G   +G    A+SLFD
Sbjct: 611 SDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFD 667

BLAST of Cp4.1LG11g03910 vs. NCBI nr
Match: XP_023546120.1 (putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 995 bits (2573), Expect = 0.0
Identity = 493/493 (100.00%), Postives = 493/493 (100.00%), Query Frame = 0

Query: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFH 60
           MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFH
Sbjct: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFH 60

Query: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGER 120
           SPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGER
Sbjct: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGER 120

Query: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK 180
           VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK
Sbjct: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK 180

Query: 181 IIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSS 240
           IIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSS
Sbjct: 181 IIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSS 240

Query: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300
           LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN
Sbjct: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300

Query: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360
           SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL
Sbjct: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360

Query: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420
           HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ
Sbjct: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420

Query: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480
           LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ
Sbjct: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480

Query: 481 NGYSTKAISLFDL 493
           NGYSTKAISLFDL
Sbjct: 481 NGYSTKAISLFDL 493

BLAST of Cp4.1LG11g03910 vs. NCBI nr
Match: XP_023546119.1 (putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 995 bits (2573), Expect = 0.0
Identity = 493/493 (100.00%), Postives = 493/493 (100.00%), Query Frame = 0

Query: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFH 60
           MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFH
Sbjct: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFH 60

Query: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGER 120
           SPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGER
Sbjct: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGER 120

Query: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK 180
           VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK
Sbjct: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK 180

Query: 181 IIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSS 240
           IIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSS
Sbjct: 181 IIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSS 240

Query: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300
           LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN
Sbjct: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300

Query: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360
           SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL
Sbjct: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360

Query: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420
           HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ
Sbjct: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420

Query: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480
           LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ
Sbjct: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480

Query: 481 NGYSTKAISLFDL 493
           NGYSTKAISLFDL
Sbjct: 481 NGYSTKAISLFDL 493

BLAST of Cp4.1LG11g03910 vs. NCBI nr
Match: XP_022962047.1 (putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial isoform X2 [Cucurbita moschata])

HSP 1 Score: 985 bits (2547), Expect = 0.0
Identity = 486/493 (98.58%), Postives = 490/493 (99.39%), Query Frame = 0

Query: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFH 60
           MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFR+FH
Sbjct: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRTFH 60

Query: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGER 120
           SPDSFMWGVLLKSHVWSGSYEEAINLYHQM CQQIQFNAYTFPSVLRACSGFGDLSVGER
Sbjct: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMFCQQIQFNAYTFPSVLRACSGFGDLSVGER 120

Query: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK 180
           VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSS+ISCNVGNGK
Sbjct: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSVISCNVGNGK 180

Query: 181 IIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSS 240
           IIEGLDTFRCMVSEGVAPDSV ILTVAEACGELGVLRLAMSVHGYILRMG+ SDRSLDSS
Sbjct: 181 IIEGLDTFRCMVSEGVAPDSVLILTVAEACGELGVLRLAMSVHGYILRMGIASDRSLDSS 240

Query: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300
           LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN
Sbjct: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300

Query: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360
           SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL
Sbjct: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360

Query: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420
           HEVGGRGIVVWNTLISVYAQKGLLKEALV+FVRMQKQGLMPDSFSLASSLSASGNEGMFQ
Sbjct: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVIFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420

Query: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480
           LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ
Sbjct: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480

Query: 481 NGYSTKAISLFDL 493
           NGYSTKAISLFDL
Sbjct: 481 NGYSTKAISLFDL 493

BLAST of Cp4.1LG11g03910 vs. NCBI nr
Match: XP_022962046.1 (putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 985 bits (2547), Expect = 0.0
Identity = 486/493 (98.58%), Postives = 490/493 (99.39%), Query Frame = 0

Query: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFH 60
           MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFR+FH
Sbjct: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRTFH 60

Query: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGER 120
           SPDSFMWGVLLKSHVWSGSYEEAINLYHQM CQQIQFNAYTFPSVLRACSGFGDLSVGER
Sbjct: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMFCQQIQFNAYTFPSVLRACSGFGDLSVGER 120

Query: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK 180
           VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSS+ISCNVGNGK
Sbjct: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSVISCNVGNGK 180

Query: 181 IIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSS 240
           IIEGLDTFRCMVSEGVAPDSV ILTVAEACGELGVLRLAMSVHGYILRMG+ SDRSLDSS
Sbjct: 181 IIEGLDTFRCMVSEGVAPDSVLILTVAEACGELGVLRLAMSVHGYILRMGIASDRSLDSS 240

Query: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300
           LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN
Sbjct: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300

Query: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360
           SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL
Sbjct: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360

Query: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420
           HEVGGRGIVVWNTLISVYAQKGLLKEALV+FVRMQKQGLMPDSFSLASSLSASGNEGMFQ
Sbjct: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVIFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420

Query: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480
           LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ
Sbjct: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480

Query: 481 NGYSTKAISLFDL 493
           NGYSTKAISLFDL
Sbjct: 481 NGYSTKAISLFDL 493

BLAST of Cp4.1LG11g03910 vs. NCBI nr
Match: KAG6598629.1 (putative pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 983 bits (2542), Expect = 0.0
Identity = 485/493 (98.38%), Postives = 490/493 (99.39%), Query Frame = 0

Query: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFH 60
           MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFR+FH
Sbjct: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRTFH 60

Query: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGER 120
           SPDSFMWGVLLKSHVWSGSYEEAINLYHQM CQQIQFNAYTFPSVLRACSGFGDLSVGER
Sbjct: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMFCQQIQFNAYTFPSVLRACSGFGDLSVGER 120

Query: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK 180
           VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSS+ISCNVGNGK
Sbjct: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSVISCNVGNGK 180

Query: 181 IIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSS 240
           IIEGLDTFRCMVSEGVAPDSV ILTVAEACGELGVLRLAMSVHGYILRMG+ SDRSLDSS
Sbjct: 181 IIEGLDTFRCMVSEGVAPDSVLILTVAEACGELGVLRLAMSVHGYILRMGIASDRSLDSS 240

Query: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300
           LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN
Sbjct: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300

Query: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360
           SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL
Sbjct: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360

Query: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420
           HEVGGRGIVVWNTLISVYAQKGLLKEALV+FVRMQKQGLMPDSFSLASSLSASGNEGMFQ
Sbjct: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVIFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420

Query: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480
           LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFV+LAYMIFDKMEPKGVVTWNSMICGLSQ
Sbjct: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVNLAYMIFDKMEPKGVVTWNSMICGLSQ 480

Query: 481 NGYSTKAISLFDL 493
           NGYSTKAISLFDL
Sbjct: 481 NGYSTKAISLFDL 493

BLAST of Cp4.1LG11g03910 vs. ExPASy TrEMBL
Match: A0A6J1HBP8 (putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462626 PE=4 SV=1)

HSP 1 Score: 985 bits (2547), Expect = 0.0
Identity = 486/493 (98.58%), Postives = 490/493 (99.39%), Query Frame = 0

Query: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFH 60
           MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFR+FH
Sbjct: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRTFH 60

Query: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGER 120
           SPDSFMWGVLLKSHVWSGSYEEAINLYHQM CQQIQFNAYTFPSVLRACSGFGDLSVGER
Sbjct: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMFCQQIQFNAYTFPSVLRACSGFGDLSVGER 120

Query: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK 180
           VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSS+ISCNVGNGK
Sbjct: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSVISCNVGNGK 180

Query: 181 IIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSS 240
           IIEGLDTFRCMVSEGVAPDSV ILTVAEACGELGVLRLAMSVHGYILRMG+ SDRSLDSS
Sbjct: 181 IIEGLDTFRCMVSEGVAPDSVLILTVAEACGELGVLRLAMSVHGYILRMGIASDRSLDSS 240

Query: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300
           LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN
Sbjct: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300

Query: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360
           SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL
Sbjct: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360

Query: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420
           HEVGGRGIVVWNTLISVYAQKGLLKEALV+FVRMQKQGLMPDSFSLASSLSASGNEGMFQ
Sbjct: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVIFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420

Query: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480
           LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ
Sbjct: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480

Query: 481 NGYSTKAISLFDL 493
           NGYSTKAISLFDL
Sbjct: 481 NGYSTKAISLFDL 493

BLAST of Cp4.1LG11g03910 vs. ExPASy TrEMBL
Match: A0A6J1HC00 (putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462626 PE=4 SV=1)

HSP 1 Score: 985 bits (2547), Expect = 0.0
Identity = 486/493 (98.58%), Postives = 490/493 (99.39%), Query Frame = 0

Query: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFH 60
           MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFR+FH
Sbjct: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRTFH 60

Query: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGER 120
           SPDSFMWGVLLKSHVWSGSYEEAINLYHQM CQQIQFNAYTFPSVLRACSGFGDLSVGER
Sbjct: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMFCQQIQFNAYTFPSVLRACSGFGDLSVGER 120

Query: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK 180
           VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSS+ISCNVGNGK
Sbjct: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSVISCNVGNGK 180

Query: 181 IIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSS 240
           IIEGLDTFRCMVSEGVAPDSV ILTVAEACGELGVLRLAMSVHGYILRMG+ SDRSLDSS
Sbjct: 181 IIEGLDTFRCMVSEGVAPDSVLILTVAEACGELGVLRLAMSVHGYILRMGIASDRSLDSS 240

Query: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300
           LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN
Sbjct: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300

Query: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360
           SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL
Sbjct: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360

Query: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420
           HEVGGRGIVVWNTLISVYAQKGLLKEALV+FVRMQKQGLMPDSFSLASSLSASGNEGMFQ
Sbjct: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVIFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420

Query: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480
           LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ
Sbjct: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480

Query: 481 NGYSTKAISLFDL 493
           NGYSTKAISLFDL
Sbjct: 481 NGYSTKAISLFDL 493

BLAST of Cp4.1LG11g03910 vs. ExPASy TrEMBL
Match: A0A6J1K6G3 (putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492100 PE=4 SV=1)

HSP 1 Score: 976 bits (2522), Expect = 0.0
Identity = 482/493 (97.77%), Postives = 486/493 (98.58%), Query Frame = 0

Query: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFH 60
           MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKS+FR+FH
Sbjct: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSIFRTFH 60

Query: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGER 120
           SPDSFMWG+LLKSHVWSGSYE AINLYHQM CQQIQFNAYTFPSVLRACSGFGDLSVGER
Sbjct: 61  SPDSFMWGMLLKSHVWSGSYEGAINLYHQMFCQQIQFNAYTFPSVLRACSGFGDLSVGER 120

Query: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK 180
           VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK
Sbjct: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK 180

Query: 181 IIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSS 240
           IIEGLDTFRCMVSEGVAPDSV ILTVAEACGEL VLRLA SVHGYILRMG+ESDRS DSS
Sbjct: 181 IIEGLDTFRCMVSEGVAPDSVLILTVAEACGELEVLRLAKSVHGYILRMGIESDRSFDSS 240

Query: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300
           LIFMYAKCGSLHSAEILFENVTHH TSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN
Sbjct: 241 LIFMYAKCGSLHSAEILFENVTHHCTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300

Query: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360
           SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL
Sbjct: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360

Query: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420
           HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ
Sbjct: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420

Query: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480
           LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ
Sbjct: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480

Query: 481 NGYSTKAISLFDL 493
           NGYSTKAISLFDL
Sbjct: 481 NGYSTKAISLFDL 493

BLAST of Cp4.1LG11g03910 vs. ExPASy TrEMBL
Match: A0A6J1K8I6 (putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492100 PE=4 SV=1)

HSP 1 Score: 976 bits (2522), Expect = 0.0
Identity = 482/493 (97.77%), Postives = 486/493 (98.58%), Query Frame = 0

Query: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFH 60
           MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKS+FR+FH
Sbjct: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSIFRTFH 60

Query: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGER 120
           SPDSFMWG+LLKSHVWSGSYE AINLYHQM CQQIQFNAYTFPSVLRACSGFGDLSVGER
Sbjct: 61  SPDSFMWGMLLKSHVWSGSYEGAINLYHQMFCQQIQFNAYTFPSVLRACSGFGDLSVGER 120

Query: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK 180
           VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK
Sbjct: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK 180

Query: 181 IIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSS 240
           IIEGLDTFRCMVSEGVAPDSV ILTVAEACGEL VLRLA SVHGYILRMG+ESDRS DSS
Sbjct: 181 IIEGLDTFRCMVSEGVAPDSVLILTVAEACGELEVLRLAKSVHGYILRMGIESDRSFDSS 240

Query: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300
           LIFMYAKCGSLHSAEILFENVTHH TSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN
Sbjct: 241 LIFMYAKCGSLHSAEILFENVTHHCTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300

Query: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360
           SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL
Sbjct: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360

Query: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420
           HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ
Sbjct: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420

Query: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480
           LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ
Sbjct: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480

Query: 481 NGYSTKAISLFDL 493
           NGYSTKAISLFDL
Sbjct: 481 NGYSTKAISLFDL 493

BLAST of Cp4.1LG11g03910 vs. ExPASy TrEMBL
Match: A0A0A0KDN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G366360 PE=4 SV=1)

HSP 1 Score: 841 bits (2172), Expect = 1.81e-299
Identity = 414/497 (83.30%), Postives = 448/497 (90.14%), Query Frame = 0

Query: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFH 60
           M LYMPLFK STTLRTL QLHAH++VTALH D L STKLIESYSQ+GDLQ+S SVFR+FH
Sbjct: 1   MRLYMPLFKASTTLRTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFH 60

Query: 61  SPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGER 120
           SPDSFMWGVLLKSHVW+G Y+EAI+LYHQML QQIQ N+YTFPSVLRACSGFGDL VG+R
Sbjct: 61  SPDSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQR 120

Query: 121 VHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGK 180
           VHGR+IKSGFDMDPVV T+LLS+YGELGYLDSA KVF EMPLRDLVSWSSIIS  V NG+
Sbjct: 121 VHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGE 180

Query: 181 IIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSS 240
           I EGLD FRCMVSEG  PDSV +LTV EACGELGVLRLA S HGYIL+ G+E+DR +DSS
Sbjct: 181 INEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSS 240

Query: 241 LIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPN 300
           LIFMYAKCGSL SAEI+FENVT+ STSTWTAMISSYN GGY +EALA+F SM+ T+VEPN
Sbjct: 241 LIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPN 300

Query: 301 SVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKIL 360
           SVTM +ILRSCTNL LLREGKSVHCVVIKN+LD NLDCLGPTLLELYA  AKHD CEKIL
Sbjct: 301 SVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKIL 360

Query: 361 HEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQ 420
           HE+GGRGI VWNTLISVYAQKGLLKE + LFVRMQKQG MPDSFSLASSLSASGNEG  Q
Sbjct: 361 HEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQ 420

Query: 421 LGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQ 480
           LGLQIHGHVIKRPFMDEYV N+LI+MYSKCG+VDLAYMIFD+MEPKGVVTWNSMI GLSQ
Sbjct: 421 LGLQIHGHVIKRPFMDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQ 480

Query: 481 NGYSTKAISLFDLILDT 497
           NGYSTKAISLFDL+  T
Sbjct: 481 NGYSTKAISLFDLMYVT 497

BLAST of Cp4.1LG11g03910 vs. TAIR 10
Match: AT1G69350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 508.1 bits (1307), Expect = 9.2e-144
Identity = 257/501 (51.30%), Postives = 355/501 (70.86%), Query Frame = 0

Query: 1   MGLYMPLFKCSTTLRTLTQLHAHLLVTA-LHKDALASTKLIESYSQMGDLQASKSVFRSF 60
           M  YMPLF+  ++LR ++QLHAHLLVT  L +D L  TKLIESY+ MG   +S+ VF +F
Sbjct: 1   MTQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF 60

Query: 61  HSPDSFMWGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGD-LSVG 120
             PDSFM+GVL+K +VW    + AI+LYH+++ +  Q + + FPSVLRAC+G  + LSVG
Sbjct: 61  PYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVG 120

Query: 121 ERVHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGN 180
            +VHGR+IK G D D V+ETSLL MYG+ G L  A KVFD MP+RDLV+WS+++S  + N
Sbjct: 121 GKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN 180

Query: 181 GKIIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLD 240
           G++++ L  F+CMV +GV PD+V++++V E C ELG LR+A SVHG I R   + D +L 
Sbjct: 181 GEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLC 240

Query: 241 SSLIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVE 300
           +SL+ MY+KCG L S+E +FE +   +  +WTAMISSYN+G + ++AL  F+ M  + +E
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 300

Query: 301 PNSVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEK 360
           PN VT+  +L SC  +GL+REGKSVH   ++ ELD N + L   L+ELYA   K   CE 
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 360

Query: 361 ILHEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGM 420
           +L  V  R IV WN+LIS+YA +G++ +AL LF +M  Q + PD+F+LASS+SA  N G+
Sbjct: 361 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL 420

Query: 421 FQLGLQIHGHVIKRPFMDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGL 480
             LG QIHGHVI+    DE+V N+LIDMYSK G VD A  +F++++ + VVTWNSM+CG 
Sbjct: 421 VPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGF 480

Query: 481 SQNGYSTKAISLFDLILDTFI 500
           SQNG S +AISLFD +  +++
Sbjct: 481 SQNGNSVEAISLFDYMYHSYL 501

BLAST of Cp4.1LG11g03910 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 275.4 bits (703), Expect = 1.0e-73
Identity = 152/488 (31.15%), Postives = 268/488 (54.92%), Query Frame = 0

Query: 7   LFKCSTTLRTLTQLHAHLLVTALHKDALASTKLIESYSQMGDLQASKSVFRSFHSPDSFM 66
           L +CS +L+ L Q+   +    L+++    TKL+  + + G +  +  VF    S  + +
Sbjct: 44  LERCS-SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 103

Query: 67  WGVLLKSHVWSGSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGERVHGRVI 126
           +  +LK        ++A+  + +M    ++   Y F  +L+ C    +L VG+ +HG ++
Sbjct: 104 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 163

Query: 127 KSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGKIIEGLD 186
           KSGF +D    T L +MY +   ++ A KVFD MP RDLVSW++I++    NG     L+
Sbjct: 164 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 223

Query: 187 TFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSSLIFMYA 246
             + M  E + P  ++I++V  A   L ++ +   +HGY +R G +S  ++ ++L+ MYA
Sbjct: 224 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA 283

Query: 247 KCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTDVEPNSVTMMV 306
           KCGSL +A  LF+ +   +  +W +MI +Y Q    +EA+ +F  M +  V+P  V++M 
Sbjct: 284 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 343

Query: 307 ILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKILHEVGGR 366
            L +C +LG L  G+ +H + ++  LD N+  +  +L+ +Y    + D    +  ++  R
Sbjct: 344 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVN-SLISMYCKCKEVDTAASMFGKLQSR 403

Query: 367 GIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQLGLQIH 426
            +V WN +I  +AQ G   +AL  F +M+ + + PD+F+  S ++A     +      IH
Sbjct: 404 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 463

Query: 427 GHVIKRPFMDE--YVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQNGYS 486
           G V+ R  +D+  +V  AL+DMY+KCG + +A +IFD M  + V TWN+MI G   +G+ 
Sbjct: 464 G-VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 523

Query: 487 TKAISLFD 493
             A+ LF+
Sbjct: 524 KAALELFE 528

BLAST of Cp4.1LG11g03910 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 273.9 bits (699), Expect = 2.9e-73
Identity = 150/463 (32.40%), Postives = 258/463 (55.72%), Query Frame = 0

Query: 32  DALASTKLIESYSQMGDLQASKSVFRSFHSPDSFMWGVLLKSHVWSGSYEEAINLYHQML 91
           D+   +KL   Y+  GDL+ +  VF       +  W +L+     SG +  +I L+ +M+
Sbjct: 128 DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187

Query: 92  CQQIQFNAYTFPSVLRACSGFGDLSVGERVHGRVIKSGFDMDPVVETSLLSMYGELGYLD 151
              ++ ++YTF  V ++ S    +  GE++HG ++KSGF     V  SL++ Y +   +D
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD 247

Query: 152 SACKVFDEMPLRDLVSWSSIISCNVGNGKIIEGLDTFRCMVSEGVAPDSVSILTVAEACG 211
           SA KVFDEM  RD++SW+SII+  V NG   +GL  F  M+  G+  D  +I++V   C 
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307

Query: 212 ELGVLRLAMSVHGYILRMGMESDRSLDSSLIFMYAKCGSLHSAEILFENVTHHSTSTWTA 271
           +  ++ L  +VH   ++     +    ++L+ MY+KCG L SA+ +F  ++  S  ++T+
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367

Query: 272 MISSYNQGGYFQEALAVFASMRNTDVEPNSVTMMVILRSCTNLGLLREGKSVHCVVIKNE 331
           MI+ Y + G   EA+ +F  M    + P+  T+  +L  C    LL EGK VH  + +N+
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427

Query: 332 LDTNLDCLGPTLLELYAGAAKHDHCEKILHEVGGRGIVVWNTLISVYAQKGLLKEALVLF 391
           L  ++  +   L+++YA        E +  E+  + I+ WNT+I  Y++     EAL LF
Sbjct: 428 LGFDI-FVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF 487

Query: 392 -VRMQKQGLMPDSFSLASSLSASGNEGMFQLGLQIHGHVIKRP-FMDEYVLNALIDMYSK 451
            + ++++   PD  ++A  L A  +   F  G +IHG++++   F D +V N+L+DMY+K
Sbjct: 488 NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAK 547

Query: 452 CGFVDLAYMIFDKMEPKGVVTWNSMICGLSQNGYSTKAISLFD 493
           CG + LA+M+FD +  K +V+W  MI G   +G+  +AI+LF+
Sbjct: 548 CGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN 589

BLAST of Cp4.1LG11g03910 vs. TAIR 10
Match: AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 264.2 bits (674), Expect = 2.3e-70
Identity = 148/452 (32.74%), Postives = 244/452 (53.98%), Query Frame = 0

Query: 43  YSQMGDLQASKSVFRSFHSPDSFMWGVLLKSHVWSGSYEEAINLYHQML-CQQIQFNAYT 102
           + + G+L  +  VF      + F W VL+  +   G ++EA+ LYH+ML    ++ + YT
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198

Query: 103 FPSVLRACSGFGDLSVGERVHGRVIKSGFDMDPVVETSLLSMYGELGYLDSACKVFDEMP 162
           FP VLR C G  DL+ G+ VH  V++ G+++D  V  +L++MY + G + SA  +FD MP
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258

Query: 163 LRDLVSWSSIISCNVGNGKIIEGLDTFRCMVSEGVAPDSVSILTVAEACGELGVLRLAMS 222
            RD++SW+++IS    NG   EGL+ F  M    V PD +++ +V  AC  LG  RL   
Sbjct: 259 RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318

Query: 223 VHGYILRMGMESDRSLDSSLIFMYAKCGSLHSAEILFENVTHHSTSTWTAMISSYNQGGY 282
           +H Y++  G   D S+ +SL  MY   GS   AE LF  +      +WT MIS Y     
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFL 378

Query: 283 FQEALAVFASMRNTDVEPNSVTMMVILRSCTNLGLLREGKSVHCVVIKNELDTNLDCLGP 342
             +A+  +  M    V+P+ +T+  +L +C  LG L  G  +H + IK  L + +  +  
Sbjct: 379 PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV-IVAN 438

Query: 343 TLLELYAGAAKHDHCEKILHEVGGRGIVVWNTLISVYAQKGLLKEALVLFVRMQKQGLMP 402
            L+ +Y+     D    I H +  + ++ W ++I+         EAL+ F+R  K  L P
Sbjct: 439 NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI-FLRQMKMTLQP 498

Query: 403 DSFSLASSLSASGNEGMFQLGLQIHGHVIKRPF-MDEYVLNALIDMYSKCGFVDLAYMIF 462
           ++ +L ++L+A    G    G +IH HV++    +D+++ NAL+DMY +CG ++ A+  F
Sbjct: 499 NAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF 558

Query: 463 DKMEPKGVVTWNSMICGLSQNGYSTKAISLFD 493
           +  + K V +WN ++ G S+ G  +  + LFD
Sbjct: 559 NS-QKKDVTSWNILLTGYSERGQGSMVVELFD 587

BLAST of Cp4.1LG11g03910 vs. TAIR 10
Match: AT2G40720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 252.7 bits (644), Expect = 6.9e-67
Identity = 152/478 (31.80%), Postives = 247/478 (51.67%), Query Frame = 0

Query: 19  QLHAHLLVTALHKDALASTKLIESYSQMG-DLQASKSVFRSFHSPDSFMWGVLLKSHVWS 78
           Q+H  +L  +L  D+   T LI+ Y + G  + A +         +  +W V++     S
Sbjct: 191 QIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGS 250

Query: 79  GSYEEAINLYHQMLCQQIQFNAYTFPSVLRACSGFGDLSVGERVHGRVIKSGFDMDPVVE 138
           G  E +++LY       ++  + +F   L ACS   +   G ++H  V+K G   DP V 
Sbjct: 251 GICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVC 310

Query: 139 TSLLSMYGELGYLDSACKVFDEMPLRDLVSWSSIISCNVGNGKIIEGLDTFRCMVSEGVA 198
           TSLLSMY + G +  A  VF  +  + L  W+++++    N      LD F  M  + V 
Sbjct: 311 TSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL 370

Query: 199 PDSVSILTVAEACGELGVLRLAMSVHGYILRMGMESDRSLDSSLIFMYAKCGSLHSAEIL 258
           PDS ++  V   C  LG+     SVH  + +  ++S  +++S+L+ +Y+KCG    A ++
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLV 430

Query: 259 FENVTHHSTSTWTAMISSYNQGGYFQEALAVFASMRNTD--VEPNSVTMMVILRSCTNLG 318
           F+++       W ++IS   + G F+EAL VF  M++ D  ++P+S  M  +  +C  L 
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLE 490

Query: 319 LLREGKSVHCVVIKNELDTNLDCLGPTLLELYAGAAKHDHCEKILHEVGGRGIVVWNTLI 378
            LR G  VH  +IK  L  N+  +G +L++LY+     +   K+   +    +V WN++I
Sbjct: 491 ALRFGLQVHGSMIKTGLVLNV-FVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMI 550

Query: 379 SVYAQKGLLKEALVLFVRMQKQGLMPDSFSLASSLSASGNEGMFQLGLQIHGHVIKRPF- 438
           S Y++  L + ++ LF  M  QG+ PDS S+ S L A  +      G  +HG+ ++    
Sbjct: 551 SCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIP 610

Query: 439 MDEYVLNALIDMYSKCGFVDLAYMIFDKMEPKGVVTWNSMICGLSQNGYSTKAISLFD 493
            D ++ NALIDMY KCGF   A  IF KM+ K ++TWN MI G   +G    A+SLFD
Sbjct: 611 SDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFD 667

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9C5071.3e-14251.30Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS... [more]
Q3E6Q11.4e-7231.15Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
Q9SN394.1e-7232.40Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
Q9M9E23.2e-6932.74Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop... [more]
Q7XJN69.8e-6631.80Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
XP_023546120.10.0100.00putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial is... [more]
XP_023546119.10.0100.00putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial is... [more]
XP_022962047.10.098.58putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial is... [more]
XP_022962046.10.098.58putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial is... [more]
KAG6598629.10.098.38putative pentatricopeptide repeat-containing protein, mitochondrial, partial [Cu... [more]
Match NameE-valueIdentityDescription
A0A6J1HBP80.098.58putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial is... [more]
A0A6J1HC000.098.58putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial is... [more]
A0A6J1K6G30.097.77putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial is... [more]
A0A6J1K8I60.097.77putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial is... [more]
A0A0A0KDN01.81e-29983.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G366360 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G69350.19.2e-14451.30Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G11290.11.0e-7331.15Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G18750.12.9e-7332.40Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G15510.12.3e-7032.74Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G40720.16.9e-6731.80Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 367..405
e-value: 1.2E-9
score: 38.2
coord: 62..109
e-value: 4.2E-7
score: 30.1
coord: 265..311
e-value: 7.7E-8
score: 32.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 469..496
e-value: 2.9E-5
score: 21.9
coord: 268..300
e-value: 3.1E-7
score: 28.1
coord: 369..402
e-value: 1.3E-7
score: 29.4
coord: 439..464
e-value: 0.0024
score: 15.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 166..196
e-value: 0.0011
score: 19.1
coord: 440..464
e-value: 1.9E-4
score: 21.5
coord: 469..494
e-value: 8.0E-6
score: 25.8
coord: 138..162
e-value: 0.0045
score: 17.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 164..198
score: 9.722731
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 367..401
score: 11.849223
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 436..470
score: 10.490022
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 63..97
score: 8.6266
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 265..299
score: 11.213468
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 342..426
e-value: 6.7E-7
score: 31.0
coord: 427..496
e-value: 1.5E-7
score: 33.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 7..114
e-value: 4.2E-12
score: 48.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 215..335
e-value: 2.9E-16
score: 61.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 115..214
e-value: 5.0E-16
score: 60.5
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 115..492
NoneNo IPR availablePANTHERPTHR47924:SF48SUBFAMILY NOT NAMEDcoord: 15..418
coord: 115..492
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 15..418

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g03910.1Cp4.1LG11g03910.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin
molecular_function GO:0005515 protein binding