![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Cp4.1LG11g02000 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAAGAAGAAACCCCAGAAGACCAAGGAGATTACAGCCGCCATACCTCAAACCTCCGCCTCCAAATCACCCGATGACGCCGCTGCCCAATCGATACAGCCCAGAAAGAGGGGCCGACCTCGTAAGGTCCTCGATGAGCCACAGAACGAACAGGATAACAAGGAACTGCCACCGCCTGAGGTTGTTTCAGATACACCACCGGAGAAGAAAGCCAAAACCACCGTGGATGAGCCACCACCGGCTTCGAAACAAGAACGCGATCAAGAAGAATCCCAATCAGGAGATGGTCCGAGAAGCAGAGGAAGACGAAAGAACAAACCCAGAAAAAGTAGCTGA ATGGGAAAGAAGAAACCCCAGAAGACCAAGGAGATTACAGCCGCCATACCTCAAACCTCCGCCTCCAAATCACCCGATGACGCCGCTGCCCAATCGATACAGCCCAGAAAGAGGGGCCGACCTCGTAAGGTCCTCGATGAGCCACAGAACGAACAGGATAACAAGGAACTGCCACCGCCTGAGGTTGTTTCAGATACACCACCGGAGAAGAAAGCCAAAACCACCGTGGATGAGCCACCACCGGCTTCGAAACAAGAACGCGATCAAGAAGAATCCCAATCAGGAGATGGTCCGAGAAGCAGAGGAAGACGAAAGAACAAACCCAGAAAAAGTAGCTGA ATGGGAAAGAAGAAACCCCAGAAGACCAAGGAGATTACAGCCGCCATACCTCAAACCTCCGCCTCCAAATCACCCGATGACGCCGCTGCCCAATCGATACAGCCCAGAAAGAGGGGCCGACCTCGTAAGGTCCTCGATGAGCCACAGAACGAACAGGATAACAAGGAACTGCCACCGCCTGAGGTTGTTTCAGATACACCACCGGAGAAGAAAGCCAAAACCACCGTGGATGAGCCACCACCGGCTTCGAAACAAGAACGCGATCAAGAAGAATCCCAATCAGGAGATGGTCCGAGAAGCAGAGGAAGACGAAAGAACAAACCCAGAAAAAGTAGCTGA MGKKKPQKTKEITAAIPQTSASKSPDDAAAQSIQPRKRGRPRKVLDEPQNEQDNKELPPPEVVSDTPPEKKAKTTVDEPPPASKQERDQEESQSGDGPRSRGRRKNKPRKSS Homology
BLAST of Cp4.1LG11g02000 vs. NCBI nr
Match: KAG6598438.1 (hypothetical protein SDJN03_08216, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 159 bits (403), Expect = 1.33e-46 Identity = 94/102 (92.16%), Postives = 95/102 (93.14%), Query Frame = 0
BLAST of Cp4.1LG11g02000 vs. NCBI nr
Match: XP_038884964.1 (uncharacterized protein LOC120075548 [Benincasa hispida]) HSP 1 Score: 134 bits (337), Expect = 4.22e-38 Identity = 82/114 (71.93%), Postives = 94/114 (82.46%), Query Frame = 0
BLAST of Cp4.1LG11g02000 vs. NCBI nr
Match: KAA0065239.1 (zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa]) HSP 1 Score: 130 bits (326), Expect = 2.18e-36 Identity = 82/117 (70.09%), Postives = 89/117 (76.07%), Query Frame = 0
BLAST of Cp4.1LG11g02000 vs. NCBI nr
Match: KAG7020516.1 (hypothetical protein SDJN02_17201, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 110 bits (274), Expect = 1.75e-28 Identity = 78/121 (64.46%), Postives = 89/121 (73.55%), Query Frame = 0
BLAST of Cp4.1LG11g02000 vs. NCBI nr
Match: XP_023002541.1 (uncharacterized protein LOC111496353 [Cucurbita maxima]) HSP 1 Score: 107 bits (266), Expect = 7.28e-27 Identity = 78/121 (64.46%), Postives = 87/121 (71.90%), Query Frame = 0
BLAST of Cp4.1LG11g02000 vs. ExPASy TrEMBL
Match: A0A5A7VIE6 (Zinc finger and BTB domain-containing protein 47 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005800 PE=4 SV=1) HSP 1 Score: 130 bits (326), Expect = 1.06e-36 Identity = 82/117 (70.09%), Postives = 89/117 (76.07%), Query Frame = 0
BLAST of Cp4.1LG11g02000 vs. ExPASy TrEMBL
Match: A0A6J1KLK8 (uncharacterized protein LOC111496353 OS=Cucurbita maxima OX=3661 GN=LOC111496353 PE=4 SV=1) HSP 1 Score: 107 bits (266), Expect = 3.53e-27 Identity = 78/121 (64.46%), Postives = 87/121 (71.90%), Query Frame = 0
BLAST of Cp4.1LG11g02000 vs. ExPASy TrEMBL
Match: A0A0A0LRH2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361610 PE=4 SV=1) HSP 1 Score: 105 bits (263), Expect = 3.74e-27 Identity = 74/115 (64.35%), Postives = 85/115 (73.91%), Query Frame = 0
BLAST of Cp4.1LG11g02000 vs. ExPASy TrEMBL
Match: A0A7N2KSD2 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.53e-08 Identity = 58/137 (42.34%), Postives = 74/137 (54.01%), Query Frame = 0
BLAST of Cp4.1LG11g02000 vs. ExPASy TrEMBL
Match: A0A5N6RLL3 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018150 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.69e-08 Identity = 49/125 (39.20%), Postives = 73/125 (58.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|