Cp4.1LG11g01810 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g01810
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Patatin
Location	Cp4.1LG11: 916752 .. 917418 (-)
RNA-Seq Expression	Cp4.1LG11g01810
Synteny	Cp4.1LG11g01810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTACAGAAGGTTTTTGGTCATATCGTTGGGAACCGGAGCTCCGAAGTCGGAAATGAAATACACGGCGGAGCAAGCAGCGGAATGGGGGATGTTGGACTGGTTAACTAACGGCGGCTCCACCCCAATAATCGACGTGTTTTCTCGAGCAAGCTCTGATATGGTGGATCTTCACCTTTCTGTCATTTTTCAAGCCCTTCGTTGCGAACAAAACTACCTTCGCATTCAGGTTCACTTATTTCCCTCCTTTTCCCTATTCATTCAAATTATTATTTTTTTTTTCATTTTTACTTAATTTTAACAACAGTTAAATTTTTTTTTATGGTAAGGCTGATTTACATTATTGTCAACTAATTTAAATAAATATATTTGTATATATACAAAATTTATTAAAAAATTTAAGAATAAATTACAAGATGAACTTACTTGTATATACTTATCTTAAACGTTAGCTTTTACAAATTACACAGGATGATACGTTGAGCGGCAAGGTGGCTTCGGTGGATGTGGCTACACAAAAGAATCTCAATGATCTTGTGAAGGTCGGAGAAGGGTTATTGAAGAAGCCAGTTTCAAGGGTGAATCTGGAGACGGGGATCTTTGAGGATTGTATTTCAAATTCAGAAACAAATGAACAAGCCCTTATAAGGCAAAAATTAAATTAA

mRNA sequence

ATGGACTACAGAAGGTTTTTGGTCATATCGTTGGGAACCGGAGCTCCGAAGTCGGAAATGAAATACACGGCGGAGCAAGCAGCGGAATGGGGGATGTTGGACTGGTTAACTAACGGCGGCTCCACCCCAATAATCGACGTGTTTTCTCGAGCAAGCTCTGATATGGTGGATCTTCACCTTTCTGTCATTTTTCAAGCCCTTCGTTGCGAACAAAACTACCTTCGCATTCAGGATGATACGTTGAGCGGCAAGGTGGCTTCGGTGGATGTGGCTACACAAAAGAATCTCAATGATCTTGTGAAGGTCGGAGAAGGGTTATTGAAGAAGCCAGTTTCAAGGGTGAATCTGGAGACGGGGATCTTTGAGGATTGTATTTCAAATTCAGAAACAAATGAACAAGCCCTTATAAGGCAAAAATTAAATTAA

Coding sequence (CDS)

ATGGACTACAGAAGGTTTTTGGTCATATCGTTGGGAACCGGAGCTCCGAAGTCGGAAATGAAATACACGGCGGAGCAAGCAGCGGAATGGGGGATGTTGGACTGGTTAACTAACGGCGGCTCCACCCCAATAATCGACGTGTTTTCTCGAGCAAGCTCTGATATGGTGGATCTTCACCTTTCTGTCATTTTTCAAGCCCTTCGTTGCGAACAAAACTACCTTCGCATTCAGGATGATACGTTGAGCGGCAAGGTGGCTTCGGTGGATGTGGCTACACAAAAGAATCTCAATGATCTTGTGAAGGTCGGAGAAGGGTTATTGAAGAAGCCAGTTTCAAGGGTGAATCTGGAGACGGGGATCTTTGAGGATTGTATTTCAAATTCAGAAACAAATGAACAAGCCCTTATAAGGCAAAAATTAAATTAA

Protein sequence

MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHLSVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGIFEDCISNSETNEQALIRQKLN

Homology

[Close]

BLAST of Cp4.1LG11g01810 vs. ExPASy Swiss-Prot
Match: O48723 (Patatin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLP2 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.0e-41
Identity = 83/136 (61.03%), Postives = 105/136 (77.21%), Query Frame = 0


Query: 2   DYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHLS 61
           DY RFLV+SLGTG  K+E K+ A++ A WG+L+WLT+  STPIID FS+ASSDMVD HLS
Sbjct: 249 DYGRFLVLSLGTGNHKAEEKFNAKEVAGWGLLNWLTHDNSTPIIDAFSQASSDMVDFHLS 308

Query: 62  VIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGIF 121
            +F+AL  E NY+RIQDDTL+G  ASVD+AT +NL+ L K G+ LLKKPV+RVNL++G  
Sbjct: 309 AVFRALHSEANYIRIQDDTLTGDAASVDIATVENLDILAKTGDELLKKPVARVNLDSGCN 368

Query: 122 EDCISNSETNEQALIR 138
           E+      TNE ALI+
Sbjct: 369 ENAYET--TNEHALIK 382

[Close]

BLAST of Cp4.1LG11g01810 vs. ExPASy Swiss-Prot
Match: O23181 (Patatin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLP3 PE=2 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 3.7e-38
Identity = 77/137 (56.20%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 60
           +D+ RFLVIS+GTG+ +++ KY A+ A++WG++ W+   GSTPI+D +S A  DMVD   
Sbjct: 272 LDFTRFLVISIGTGSIRNQEKYNAKMASKWGLMCWVFESGSTPILDCYSEAIHDMVDYQS 331

Query: 61  SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 120
           SV+FQALR E+NYLRI DD+L G + SVD++T+KN+  LV+VGE LLKK VSRVNLE+G 
Sbjct: 332 SVVFQALRSEKNYLRIDDDSLKGDLGSVDISTEKNMEGLVEVGEALLKKRVSRVNLESGH 391

Query: 121 FEDCISNSETNEQALIR 138
           ++  IS + TNE+AL R
Sbjct: 392 YQP-ISENVTNEEALKR 407

[Close]

BLAST of Cp4.1LG11g01810 vs. ExPASy Swiss-Prot
Match: A2YW91 (Patatin-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=PLP2 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.1e-33
Identity = 69/136 (50.74%), Postives = 100/136 (73.53%), Query Frame = 0


Query: 2   DYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHLS 61
           +Y +F+VIS+G G+   + KY A+ AA+WG+ +WL  G S PIID+F+ AS+DMVD+HL 
Sbjct: 254 EYGKFMVISIGCGS-NHDQKYKAKDAAKWGIFNWLIKGSSAPIIDMFTSASADMVDIHLG 313

Query: 62  VIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGIF 121
           V+F AL+CE+NYLRIQ D L+G   S+D  +++N+++LVK+GE LL K VSRV+LETG +
Sbjct: 314 VLFSALQCEKNYLRIQYDQLTGSAGSIDDCSKENMDNLVKIGEMLLDKNVSRVDLETGHY 373

Query: 122 EDCISNSETNEQALIR 138
            D ++   TN   L +
Sbjct: 374 VD-VAGEGTNRDQLAK 387

[Close]

BLAST of Cp4.1LG11g01810 vs. ExPASy Swiss-Prot
Match: Q6ZJD3 (Patatin-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP2 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.1e-33
Identity = 69/136 (50.74%), Postives = 100/136 (73.53%), Query Frame = 0


Query: 2   DYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHLS 61
           +Y +F+VIS+G G+   + KY A+ AA+WG+ +WL  G S PIID+F+ AS+DMVD+HL 
Sbjct: 254 EYGKFMVISIGCGS-NHDQKYKAKDAAKWGIFNWLIKGSSAPIIDMFTSASADMVDIHLG 313

Query: 62  VIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGIF 121
           V+F AL+CE+NYLRIQ D L+G   S+D  +++N+++LVK+GE LL K VSRV+LETG +
Sbjct: 314 VLFSALQCEKNYLRIQYDQLTGSAGSIDDCSKENMDNLVKIGEMLLDKNVSRVDLETGHY 373

Query: 122 EDCISNSETNEQALIR 138
            D ++   TN   L +
Sbjct: 374 VD-VAGEGTNRDQLAK 387

[Close]

BLAST of Cp4.1LG11g01810 vs. ExPASy Swiss-Prot
Match: O23179 (Patatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLP1 PE=1 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 3.6e-33
Identity = 64/133 (48.12%), Postives = 97/133 (72.93%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 60
           + + RFLVIS+GTG+ K E KY+A++AA+WG++ WL + GSTPI+D+   +S DM+  H 
Sbjct: 248 LGFDRFLVISIGTGSTKREEKYSAKKAAKWGIISWLYDDGSTPILDITMESSRDMIHYHS 307

Query: 61  SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 120
           SV+F+AL+ E  YLRI DDTL G V+++D+AT+ NL +L K+GE +L   V ++N++TG+
Sbjct: 308 SVVFKALQSEDKYLRIDDDTLEGDVSTMDLATKSNLENLQKIGEKMLTNRVMQMNIDTGV 367

Query: 121 FEDCISNSETNEQ 134
           +E    N   +EQ
Sbjct: 368 YEPVAENITNDEQ 380

[Close]

BLAST of Cp4.1LG11g01810 vs. NCBI nr
Match: XP_022996968.1 (patatin-like protein 2 isoform X3 [Cucurbita maxima])

HSP 1 Score: 273 bits (698), Expect = 2.63e-89
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 60
           MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL
Sbjct: 174 MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 233

Query: 61  SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 120
           SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI
Sbjct: 234 SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 293

Query: 121 FEDCISNSETNEQALIR 137
           FEDCISNSETNEQALIR
Sbjct: 294 FEDCISNSETNEQALIR 310

[Close]

BLAST of Cp4.1LG11g01810 vs. NCBI nr
Match: XP_022962036.1 (patatin-like protein 2 isoform X3 [Cucurbita moschata])

HSP 1 Score: 273 bits (698), Expect = 2.63e-89
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 60
           MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL
Sbjct: 174 MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 233

Query: 61  SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 120
           SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI
Sbjct: 234 SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 293

Query: 121 FEDCISNSETNEQALIR 137
           FEDCISNSETNEQALIR
Sbjct: 294 FEDCISNSETNEQALIR 310

[Close]

BLAST of Cp4.1LG11g01810 vs. NCBI nr
Match: XP_023547154.1 (patatin-like protein 2 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273 bits (698), Expect = 2.63e-89
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 60
           MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL
Sbjct: 174 MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 233

Query: 61  SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 120
           SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI
Sbjct: 234 SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 293

Query: 121 FEDCISNSETNEQALIR 137
           FEDCISNSETNEQALIR
Sbjct: 294 FEDCISNSETNEQALIR 310

[Close]

BLAST of Cp4.1LG11g01810 vs. NCBI nr
Match: XP_023547153.1 (patatin-like protein 2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273 bits (698), Expect = 2.20e-88
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 60
           MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL
Sbjct: 244 MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 303

Query: 61  SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 120
           SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI
Sbjct: 304 SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 363

Query: 121 FEDCISNSETNEQALIR 137
           FEDCISNSETNEQALIR
Sbjct: 364 FEDCISNSETNEQALIR 380

[Close]

BLAST of Cp4.1LG11g01810 vs. NCBI nr
Match: XP_022996967.1 (patatin-like protein 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 273 bits (698), Expect = 2.20e-88
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 60
           MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL
Sbjct: 244 MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 303

Query: 61  SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 120
           SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI
Sbjct: 304 SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 363

Query: 121 FEDCISNSETNEQALIR 137
           FEDCISNSETNEQALIR
Sbjct: 364 FEDCISNSETNEQALIR 380

[Close]

BLAST of Cp4.1LG11g01810 vs. ExPASy TrEMBL
Match: A0A6J1KCH7 (Patatin OS=Cucurbita maxima OX=3661 GN=LOC111492038 PE=3 SV=1)

HSP 1 Score: 273 bits (698), Expect = 1.27e-89
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 60
           MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL
Sbjct: 174 MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 233

Query: 61  SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 120
           SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI
Sbjct: 234 SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 293

Query: 121 FEDCISNSETNEQALIR 137
           FEDCISNSETNEQALIR
Sbjct: 294 FEDCISNSETNEQALIR 310

[Close]

BLAST of Cp4.1LG11g01810 vs. ExPASy TrEMBL
Match: A0A6J1HBZ1 (Patatin OS=Cucurbita moschata OX=3662 GN=LOC111462619 PE=3 SV=1)

HSP 1 Score: 273 bits (698), Expect = 1.27e-89
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 60
           MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL
Sbjct: 174 MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 233

Query: 61  SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 120
           SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI
Sbjct: 234 SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 293

Query: 121 FEDCISNSETNEQALIR 137
           FEDCISNSETNEQALIR
Sbjct: 294 FEDCISNSETNEQALIR 310

[Close]

BLAST of Cp4.1LG11g01810 vs. ExPASy TrEMBL
Match: A0A6J1K3I1 (Patatin OS=Cucurbita maxima OX=3661 GN=LOC111492038 PE=3 SV=1)

HSP 1 Score: 273 bits (698), Expect = 1.06e-88
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 60
           MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL
Sbjct: 244 MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 303

Query: 61  SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 120
           SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI
Sbjct: 304 SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 363

Query: 121 FEDCISNSETNEQALIR 137
           FEDCISNSETNEQALIR
Sbjct: 364 FEDCISNSETNEQALIR 380

[Close]

BLAST of Cp4.1LG11g01810 vs. ExPASy TrEMBL
Match: A0A6J1HDZ3 (Patatin OS=Cucurbita moschata OX=3662 GN=LOC111462619 PE=3 SV=1)

HSP 1 Score: 273 bits (698), Expect = 1.06e-88
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 60
           MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL
Sbjct: 244 MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 303

Query: 61  SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 120
           SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI
Sbjct: 304 SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 363

Query: 121 FEDCISNSETNEQALIR 137
           FEDCISNSETNEQALIR
Sbjct: 364 FEDCISNSETNEQALIR 380

[Close]

BLAST of Cp4.1LG11g01810 vs. ExPASy TrEMBL
Match: A0A6J1K885 (Patatin OS=Cucurbita maxima OX=3661 GN=LOC111492038 PE=3 SV=1)

HSP 1 Score: 273 bits (698), Expect = 1.09e-88
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 60
           MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL
Sbjct: 245 MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 304

Query: 61  SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 120
           SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI
Sbjct: 305 SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 364

Query: 121 FEDCISNSETNEQALIR 137
           FEDCISNSETNEQALIR
Sbjct: 365 FEDCISNSETNEQALIR 381

[Close]

BLAST of Cp4.1LG11g01810 vs. TAIR 10
Match: AT2G26560.1 (phospholipase A 2A )

HSP 1 Score: 167.9 bits (424), Expect = 5.7e-42
Identity = 83/136 (61.03%), Postives = 105/136 (77.21%), Query Frame = 0


Query: 2   DYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHLS 61
           DY RFLV+SLGTG  K+E K+ A++ A WG+L+WLT+  STPIID FS+ASSDMVD HLS
Sbjct: 249 DYGRFLVLSLGTGNHKAEEKFNAKEVAGWGLLNWLTHDNSTPIIDAFSQASSDMVDFHLS 308

Query: 62  VIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGIF 121
            +F+AL  E NY+RIQDDTL+G  ASVD+AT +NL+ L K G+ LLKKPV+RVNL++G  
Sbjct: 309 AVFRALHSEANYIRIQDDTLTGDAASVDIATVENLDILAKTGDELLKKPVARVNLDSGCN 368

Query: 122 EDCISNSETNEQALIR 138
           E+      TNE ALI+
Sbjct: 369 ENAYET--TNEHALIK 382

[Close]

BLAST of Cp4.1LG11g01810 vs. TAIR 10
Match: AT4G37050.1 (PATATIN-like protein 4 )

HSP 1 Score: 159.1 bits (401), Expect = 2.7e-39
Identity = 77/137 (56.20%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 60
           +D+ RFLVIS+GTG+ +++ KY A+ A++WG++ W+   GSTPI+D +S A  DMVD   
Sbjct: 272 LDFTRFLVISIGTGSIRNQEKYNAKMASKWGLMCWVFESGSTPILDCYSEAIHDMVDYQS 331

Query: 61  SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 120
           SV+FQALR E+NYLRI DD+L G + SVD++T+KN+  LV+VGE LLKK VSRVNLE+G 
Sbjct: 332 SVVFQALRSEKNYLRIDDDSLKGDLGSVDISTEKNMEGLVEVGEALLKKRVSRVNLESGH 391

Query: 121 FEDCISNSETNEQALIR 138
           ++  IS + TNE+AL R
Sbjct: 392 YQP-ISENVTNEEALKR 407

[Close]

BLAST of Cp4.1LG11g01810 vs. TAIR 10
Match: AT4G37070.2 (Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 2.6e-34
Identity = 64/133 (48.12%), Postives = 97/133 (72.93%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 60
           + + RFLVIS+GTG+ K E KY+A++AA+WG++ WL + GSTPI+D+   +S DM+  H 
Sbjct: 248 LGFDRFLVISIGTGSTKREEKYSAKKAAKWGIISWLYDDGSTPILDITMESSRDMIHYHS 307

Query: 61  SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 120
           SV+F+AL+ E  YLRI DDTL G V+++D+AT+ NL +L K+GE +L   V ++N++TG+
Sbjct: 308 SVVFKALQSEDKYLRIDDDTLEGDVSTMDLATKSNLENLQKIGEKMLTNRVMQMNIDTGV 367

Query: 121 FEDCISNSETNEQ 134
           +E    N   +EQ
Sbjct: 368 YEPVAENITNDEQ 380

[Close]

BLAST of Cp4.1LG11g01810 vs. TAIR 10
Match: AT4G37070.3 (Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 2.6e-34
Identity = 64/133 (48.12%), Postives = 97/133 (72.93%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 60
           + + RFLVIS+GTG+ K E KY+A++AA+WG++ WL + GSTPI+D+   +S DM+  H 
Sbjct: 248 LGFDRFLVISIGTGSTKREEKYSAKKAAKWGIISWLYDDGSTPILDITMESSRDMIHYHS 307

Query: 61  SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 120
           SV+F+AL+ E  YLRI DDTL G V+++D+AT+ NL +L K+GE +L   V ++N++TG+
Sbjct: 308 SVVFKALQSEDKYLRIDDDTLEGDVSTMDLATKSNLENLQKIGEKMLTNRVMQMNIDTGV 367

Query: 121 FEDCISNSETNEQ 134
           +E    N   +EQ
Sbjct: 368 YEPVAENITNDEQ 380

[Close]

BLAST of Cp4.1LG11g01810 vs. TAIR 10
Match: AT4G37070.1 (Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 2.6e-34
Identity = 64/133 (48.12%), Postives = 97/133 (72.93%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 60
           + + RFLVIS+GTG+ K E KY+A++AA+WG++ WL + GSTPI+D+   +S DM+  H 
Sbjct: 248 LGFDRFLVISIGTGSTKREEKYSAKKAAKWGIISWLYDDGSTPILDITMESSRDMIHYHS 307

Query: 61  SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 120
           SV+F+AL+ E  YLRI DDTL G V+++D+AT+ NL +L K+GE +L   V ++N++TG+
Sbjct: 308 SVVFKALQSEDKYLRIDDDTLEGDVSTMDLATKSNLENLQKIGEKMLTNRVMQMNIDTGV 367

Query: 121 FEDCISNSETNEQ 134
           +E    N   +EQ
Sbjct: 368 YEPVAENITNDEQ 380

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g01810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48723	8.0e-41	61.03	Patatin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLP2 PE=1 SV=1	[more]
O23181	3.7e-38	56.20	Patatin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLP3 PE=2 SV=2	[more]
A2YW91	2.1e-33	50.74	Patatin-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=PLP2 PE=3 SV=1	[more]
Q6ZJD3	2.1e-33	50.74	Patatin-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP2 PE=3 SV=...	[more]
O23179	3.6e-33	48.12	Patatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLP1 PE=1 SV=2	[more]

BLAST of Cp4.1LG11g01810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022996968.1	2.63e-89	100.00	patatin-like protein 2 isoform X3 [Cucurbita maxima]	[more]
XP_022962036.1	2.63e-89	100.00	patatin-like protein 2 isoform X3 [Cucurbita moschata]	[more]
XP_023547154.1	2.63e-89	100.00	patatin-like protein 2 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_023547153.1	2.20e-88	100.00	patatin-like protein 2 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022996967.1	2.20e-88	100.00	patatin-like protein 2 isoform X2 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG11g01810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KCH7	1.27e-89	100.00	Patatin OS=Cucurbita maxima OX=3661 GN=LOC111492038 PE=3 SV=1	[more]
A0A6J1HBZ1	1.27e-89	100.00	Patatin OS=Cucurbita moschata OX=3662 GN=LOC111462619 PE=3 SV=1	[more]
A0A6J1K3I1	1.06e-88	100.00	Patatin OS=Cucurbita maxima OX=3661 GN=LOC111492038 PE=3 SV=1	[more]
A0A6J1HDZ3	1.06e-88	100.00	Patatin OS=Cucurbita moschata OX=3662 GN=LOC111462619 PE=3 SV=1	[more]
A0A6J1K885	1.09e-88	100.00	Patatin OS=Cucurbita maxima OX=3661 GN=LOC111492038 PE=3 SV=1	[more]

BLAST of Cp4.1LG11g01810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26560.1	5.7e-42	61.03	phospholipase A 2A	[more]
AT4G37050.1	2.7e-39	56.20	PATATIN-like protein 4	[more]
AT4G37070.2	2.6e-34	48.12	Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein	[more]
AT4G37070.3	2.6e-34	48.12	Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein	[more]
AT4G37070.1	2.6e-34	48.12	Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.1090.10	Cytosolic phospholipase A2 catalytic domain	coord: 1..140 e-value: 2.2E-33 score: 118.0
None	No IPR available	PANTHER	PTHR32176	XYLOSE ISOMERASE	coord: 1..137
None	No IPR available	PANTHER	PTHR32176:SF37	PATATIN	coord: 1..137
IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	SUPERFAMILY	52151	FabD/lysophospholipase-like	coord: 2..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g01810.1	Cp4.1LG11g01810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016042	lipid catabolic process
molecular_function	GO:0016298	lipase activity