Cp4.1LG11g01160 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g01160
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein SOB FIVE-LIKE 6-like
Location	Cp4.1LG11: 630034 .. 631635 (-)
RNA-Seq Expression	Cp4.1LG11g01160
Synteny	Cp4.1LG11g01160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGGAAGGGACAATGTTTATTAATACTTTGGGGCCGCCTTCCATTTACCTATCCAGGTGGGTCGCGTCTCCCAATCATTAACCCCCAAATACCTTACTCTATAAAGCTAACCAAACCCACCCTCTAATTTTGTAATCTAACAACCTCCGTTTCAATGCTCAGTTGTCTTCCTCTCTCAGAATGAGTCATTTTTCGGGTTCCCATTGTAACAACACTGCCTGTGAATCGGGGTGGACAATGTATTTGGAGGAGTCGTTTCAGACGGAGGGGAGGTTCCGGCCGAGTGCCGTGGATTACGGCGGCAGAGGGAAGGAGGAGGAAGAAGGGGATTTGTCCATGATTTCGGATGCGTCGTCGGGGCCGAGGGATGGGTATTCTGAGGAGAATTGCCAGTCAGTAGGGCGCAATGCGGGGAAAGCCGCGGCGGCCAAAAGTAAGAGGAAAGAGGAAATGGGGCGGCGGAACAAACATTCTTGCCTTGATGACACTGCAAGCTCCCCTGTTTTTGGGCTTTCCAAGGTCGGTTTGCTTCTTCCTCATATCTCTTATTCACATTAAAATTTTATAATTAAATCAATTTAGATTGAATTTTGTTTTTAAATTTTGAATGTATAACTTTCTAAAATTCACGTTGATATAATATAAGAAAAAAAAAGCACTAAAACCAAGAGTTGATAAGGACTTCTCATTAATGTAAAGAGTTAGTAGTATTAATATAGTGGCATAAAATAAAATCCACTGAATTTAGGCATAAATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTAAAAAAAAAGTGTCATATCATAGGAACAAAATAAATTATGAATGTACTAAGAATTTAGAATTGTGAATGATATAAAAAAAATAAATGTAAGATGTTAGTTGTCGCTGTCAATAATTTGTTGTCAGTCACGTTTTTTGGTTGTGTTGTTTACAGACGAGAGAGACGAATCCATATAGAAATGAAGGTTTGGTGGAGAATGTAAAAGAATTCTCACAAACCCATTCTCGAAAACAACATGGGAAGGTAAAAAAAAAAAAAGAAAAAAAACACTTCATCCCAATCTTTCAATTTTCAAACTAAAAACTAAACAAACAAAAAAAAAATCTGTGTATTGCAGAAACCGACGAGCTTTTTTCAGTCTTCCTCTGCCAAAAAGACGACCAAAAATGTCTCAGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAANCTCTGTTTGTGTACGTTTAAGGCTCCAAATTTACCGTCGTTTGTGTGTGCAGGTGATTTTCAGGAACAGTAGAAGGAGGAGGACGACGGGAATAAGTAAATGAAAATGATAGAGACACGAGGATCATGGATTATTATGATTATTGTTATTATTATTATTATTATTATTTTGTTCCCTGGCTTTCTTGTCAATGTGGGCAGTTGATTGGAAAGAGTTGAATTATTTGGGAAGTTATTGTGTTATTGTTGTTTTCACCTTTTGGAAGATGTGTAAATTACAAAGATATGAGCGAGAATTTGTCACTATTTATTTATTGCCTTTTTCTTTTAAATACTAATAATATTAAGTTGTGGTTATTTGG

mRNA sequence

TGGGGAAGGGACAATGTTTATTAATACTTTGGGGCCGCCTTCCATTTACCTATCCAGGTGGGTCGCGTCTCCCAATCATTAACCCCCAAATACCTTACTCTATAAAGCTAACCAAACCCACCCTCTAATTTTGTAATCTAACAACCTCCGTTTCAATGCTCAGTTGTCTTCCTCTCTCAGAATGAGTCATTTTTCGGGTTCCCATTGTAACAACACTGCCTGTGAATCGGGGTGGACAATGTATTTGGAGGAGTCGTTTCAGACGGAGGGGAGGTTCCGGCCGAGTGCCGTGGATTACGGCGGCAGAGGGAAGGAGGAGGAAGAAGGGGATTTGTCCATGATTTCGGATGCGTCGTCGGGGCCGAGGGATGGGTATTCTGAGGAGAATTGCCAGTCAGTAGGGCGCAATGCGGGGAAAGCCGCGGCGGCCAAAAGTAAGAGGAAAGAGGAAATGGGGCGGCGGAACAAACATTCTTGCCTTGATGACACTGCAAGCTCCCCTGTTTTTGGGCTTTCCAAGACGAGAGAGACGAATCCATATAGAAATGAAGGTTTGGTGGAGAATGTAAAAGAATTCTCACAAACCCATTCTCGAAAACAACATGGGAAGAAACCGACGAGCTTTTTTCAGTCTTCCTCTGCCAAAAAGACGACCAAAAATGTCTCAGGTGATTTTCAGGAACAGTAGAAGGAGGAGGACGACGGGAATAAGTAAATGAAAATGATAGAGACACGAGGATCATGGATTATTATGATTATTGTTATTATTATTATTATTATTATTTTGTTCCCTGGCTTTCTTGTCAATGTGGGCAGTTGATTGGAAAGAGTTGAATTATTTGGGAAGTTATTGTGTTATTGTTGTTTTCACCTTTTGGAAGATGTGTAAATTACAAAGATATGAGCGAGAATTTGTCACTATTTATTTATTGCCTTTTTCTTTTAAATACTAATAATATTAAGTTGTGGTTATTTGG

Coding sequence (CDS)

ATGAGTCATTTTTCGGGTTCCCATTGTAACAACACTGCCTGTGAATCGGGGTGGACAATGTATTTGGAGGAGTCGTTTCAGACGGAGGGGAGGTTCCGGCCGAGTGCCGTGGATTACGGCGGCAGAGGGAAGGAGGAGGAAGAAGGGGATTTGTCCATGATTTCGGATGCGTCGTCGGGGCCGAGGGATGGGTATTCTGAGGAGAATTGCCAGTCAGTAGGGCGCAATGCGGGGAAAGCCGCGGCGGCCAAAAGTAAGAGGAAAGAGGAAATGGGGCGGCGGAACAAACATTCTTGCCTTGATGACACTGCAAGCTCCCCTGTTTTTGGGCTTTCCAAGACGAGAGAGACGAATCCATATAGAAATGAAGGTTTGGTGGAGAATGTAAAAGAATTCTCACAAACCCATTCTCGAAAACAACATGGGAAGAAACCGACGAGCTTTTTTCAGTCTTCCTCTGCCAAAAAGACGACCAAAAATGTCTCAGGTGATTTTCAGGAACAGTAG

Protein sequence

MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEGDLSMISDASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ

Homology

[Close]

BLAST of Cp4.1LG11g01160 vs. ExPASy Swiss-Prot
Match: Q8L9K4 (Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.7e-09
Identity = 51/153 (33.33%), Postives = 79/153 (51.63%), Query Frame = 0


Query: 10  NNTACESGWTMYLEES--------------FQTEGRFRPS-AVDYGGRGKEEEEGDLSMI 69
           +++ CESGWT+YL++S              F +  R + S   +Y  + +EEEE DLSMI
Sbjct: 4   SSSGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMI 63

Query: 70  SDASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKT 129
           SDASSGPR+   E++ + +     K    + K++ +  + N  S LDDTASSP+F     
Sbjct: 64  SDASSGPRNISEEDSVKKINIVGLKKQCKREKKRRDYEKMN--SLLDDTASSPLFNFPHM 123

Query: 130 RETNPYRN---EGLVENVKEFSQTHSRKQHGKK 145
            + +   N   +   E+  ++SQ  S  Q   K
Sbjct: 124 LQKSVGGNKIEQTFPESTLDYSQGFSATQFQDK 154

[Close]

BLAST of Cp4.1LG11g01160 vs. NCBI nr
Match: XP_023546846.1 (uncharacterized protein LOC111805836 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 331 bits (849), Expect = 2.23e-114
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEGDLSMISDASSG 60
           MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEGDLSMISDASSG
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEGDLSMISDASSG 60

Query: 61  PRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRETNPY 120
           PRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRETNPY
Sbjct: 61  PRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRETNPY 120

Query: 121 RNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 168
           RNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ
Sbjct: 121 RNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 168

[Close]

BLAST of Cp4.1LG11g01160 vs. NCBI nr
Match: KAG7029296.1 (hypothetical protein SDJN02_07634, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 325 bits (833), Expect = 7.32e-112
Identity = 168/173 (97.11%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEE-----GDLSMIS 60
           MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEE     GDLSMIS
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEEEEEEGDLSMIS 60

Query: 61  DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR 120
           DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR
Sbjct: 61  DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR 120

Query: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 168
           ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ
Sbjct: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 173

[Close]

BLAST of Cp4.1LG11g01160 vs. NCBI nr
Match: KAG6598325.1 (hypothetical protein SDJN03_08103, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323 bits (829), Expect = 2.88e-111
Identity = 167/172 (97.09%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEE----GDLSMISD 60
           MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEE    GDLSMISD
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEEEEEGDLSMISD 60

Query: 61  ASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRE 120
           ASSGPRDGYSEENCQSVGRNAGK AAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRE
Sbjct: 61  ASSGPRDGYSEENCQSVGRNAGKPAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRE 120

Query: 121 TNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 168
           TNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ
Sbjct: 121 TNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 172

[Close]

BLAST of Cp4.1LG11g01160 vs. NCBI nr
Match: XP_022962515.1 (uncharacterized protein LOC111462920 [Cucurbita moschata])

HSP 1 Score: 323 bits (828), Expect = 3.95e-111
Identity = 166/171 (97.08%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEE---GDLSMISDA 60
           MSHFSGSHCNNTACESGWTMYLEESF+TEGRFRP AVDYGGRGKEEEE   GDLSMISDA
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFETEGRFRPGAVDYGGRGKEEEEEEEGDLSMISDA 60

Query: 61  SSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRET 120
           SSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRET
Sbjct: 61  SSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRET 120

Query: 121 NPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 168
           NPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ
Sbjct: 121 NPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 171

[Close]

BLAST of Cp4.1LG11g01160 vs. NCBI nr
Match: XP_022997597.1 (uncharacterized protein LOC111492483 [Cucurbita maxima])

HSP 1 Score: 313 bits (803), Expect = 2.65e-107
Identity = 161/172 (93.60%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEE----GDLSMISD 60
           MSHFSGSHCNNTACESGWTMYLEESF+TEGRFRPSAVDYGGRGKEEEE    GDLSMISD
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFETEGRFRPSAVDYGGRGKEEEEEEEEGDLSMISD 60

Query: 61  ASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRE 120
           ASSGPRDGYSEENCQSV RN GKAAAAKSKRKE+MGRRNKHSCLDDTASSPVFGLSKTRE
Sbjct: 61  ASSGPRDGYSEENCQSVRRNGGKAAAAKSKRKEDMGRRNKHSCLDDTASSPVFGLSKTRE 120

Query: 121 TNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 168
           TNPYRNEGLVENVKEFSQTHSRKQHGKKPT FFQSSSAKK TKNVSGDF+EQ
Sbjct: 121 TNPYRNEGLVENVKEFSQTHSRKQHGKKPTGFFQSSSAKKMTKNVSGDFEEQ 172

[Close]

BLAST of Cp4.1LG11g01160 vs. ExPASy TrEMBL
Match: A0A6J1HFC4 (uncharacterized protein LOC111462920 OS=Cucurbita moschata OX=3662 GN=LOC111462920 PE=3 SV=1)

HSP 1 Score: 323 bits (828), Expect = 1.91e-111
Identity = 166/171 (97.08%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEE---GDLSMISDA 60
           MSHFSGSHCNNTACESGWTMYLEESF+TEGRFRP AVDYGGRGKEEEE   GDLSMISDA
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFETEGRFRPGAVDYGGRGKEEEEEEEGDLSMISDA 60

Query: 61  SSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRET 120
           SSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRET
Sbjct: 61  SSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRET 120

Query: 121 NPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 168
           NPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ
Sbjct: 121 NPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 171

[Close]

BLAST of Cp4.1LG11g01160 vs. ExPASy TrEMBL
Match: A0A6J1K5J3 (uncharacterized protein LOC111492483 OS=Cucurbita maxima OX=3661 GN=LOC111492483 PE=3 SV=1)

HSP 1 Score: 313 bits (803), Expect = 1.28e-107
Identity = 161/172 (93.60%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEE----GDLSMISD 60
           MSHFSGSHCNNTACESGWTMYLEESF+TEGRFRPSAVDYGGRGKEEEE    GDLSMISD
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFETEGRFRPSAVDYGGRGKEEEEEEEEGDLSMISD 60

Query: 61  ASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRE 120
           ASSGPRDGYSEENCQSV RN GKAAAAKSKRKE+MGRRNKHSCLDDTASSPVFGLSKTRE
Sbjct: 61  ASSGPRDGYSEENCQSVRRNGGKAAAAKSKRKEDMGRRNKHSCLDDTASSPVFGLSKTRE 120

Query: 121 TNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 168
           TNPYRNEGLVENVKEFSQTHSRKQHGKKPT FFQSSSAKK TKNVSGDF+EQ
Sbjct: 121 TNPYRNEGLVENVKEFSQTHSRKQHGKKPTGFFQSSSAKKMTKNVSGDFEEQ 172

[Close]

BLAST of Cp4.1LG11g01160 vs. ExPASy TrEMBL
Match: A0A0A0LR31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354620 PE=3 SV=1)

HSP 1 Score: 248 bits (634), Expect = 6.58e-82
Identity = 134/170 (78.82%), Postives = 145/170 (85.29%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEG-DLSMISDASS 60
           MS+F+GSHC+N+ CESGWTMY EES +TE RFR S VDYGG  KEEEE  DLSMISDASS
Sbjct: 1   MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYGGGEKEEEEERDLSMISDASS 60

Query: 61  GPRDGYSEE-NCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRETN 120
           GPR+GY EE NCQSV R+ GK  A KSKR+EEMG RN+HSCLDDTASSPVFGLSK RETN
Sbjct: 61  GPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLSKIRETN 120

Query: 121 PYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 168
           PYRNEGL +NVKEFSQTHSRK HGKK TSFFQSSS KK  KNVSGD+QEQ
Sbjct: 121 PYRNEGLADNVKEFSQTHSRK-HGKKQTSFFQSSSVKKLAKNVSGDYQEQ 169

[Close]

BLAST of Cp4.1LG11g01160 vs. ExPASy TrEMBL
Match: A0A1S3BBA3 (uncharacterized protein LOC103487825 OS=Cucumis melo OX=3656 GN=LOC103487825 PE=3 SV=1)

HSP 1 Score: 233 bits (594), Expect = 8.12e-76
Identity = 128/170 (75.29%), Postives = 140/170 (82.35%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEGDLSMISDASSG 60
           MS+F+GSH +N+ CESGWTMY EES + E RFR S VDYGG  KEEEEGDLSMISDASSG
Sbjct: 1   MSNFTGSHYDNSGCESGWTMYFEESIEKEERFRGSPVDYGGGEKEEEEGDLSMISDASSG 60

Query: 61  PRDGYSEE-NCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRETN- 120
           PR+GY EE +C SV R+ GK  A KSKR+EEMG RN+HSCLDDTASSPV GLSK RETN 
Sbjct: 61  PRNGYYEEKDCPSVLRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVLGLSKIRETNN 120

Query: 121 PYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 168
           PYRNEGL +N KEFSQTHSRK HGKK TSFFQSSS KK  KNVSGD+ EQ
Sbjct: 121 PYRNEGLADNAKEFSQTHSRK-HGKKQTSFFQSSSVKKLAKNVSGDYPEQ 169

[Close]

BLAST of Cp4.1LG11g01160 vs. ExPASy TrEMBL
Match: A0A6J1BRF5 (uncharacterized protein LOC111005036 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005036 PE=3 SV=1)

HSP 1 Score: 204 bits (518), Expect = 2.88e-64
Identity = 115/174 (66.09%), Postives = 137/174 (78.74%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEGDLSMISDASSG 60
           MS+FSG+HCN+  C+SGWT+Y ++S +   RFRPS  DYGG    EEEGDLSM+SDASSG
Sbjct: 1   MSNFSGTHCNS-GCDSGWTVYFQDSDE---RFRPSVADYGGG---EEEGDLSMVSDASSG 60

Query: 61  PRDGYS-------EENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSK 120
           PR+G+        E N Q V R  G  +AAK+KR++E+GRRN+HS LDDTA+SPVF LSK
Sbjct: 61  PRNGFGDGPVGFEEXNFQPVPRRNGGKSAAKTKRRDEIGRRNQHSSLDDTATSPVFALSK 120

Query: 121 TRETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQE 167
            RETNPY NE LVENVKEF+ +HSRKQ GKK TSFFQSSSAKK+T+NVSGDFQE
Sbjct: 121 -RETNPYTNEDLVENVKEFAHSHSRKQQGKKQTSFFQSSSAKKSTRNVSGDFQE 166

[Close]

BLAST of Cp4.1LG11g01160 vs. TAIR 10
Match: AT4G33800.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 4.0e-10
Identity = 51/153 (33.33%), Postives = 79/153 (51.63%), Query Frame = 0


Query: 10  NNTACESGWTMYLEES--------------FQTEGRFRPS-AVDYGGRGKEEEEGDLSMI 69
           +++ CESGWT+YL++S              F +  R + S   +Y  + +EEEE DLSMI
Sbjct: 4   SSSGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMI 63

Query: 70  SDASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKT 129
           SDASSGPR+   E++ + +     K    + K++ +  + N  S LDDTASSP+F     
Sbjct: 64  SDASSGPRNISEEDSVKKINIVGLKKQCKREKKRRDYEKMN--SLLDDTASSPLFNFPHM 123

Query: 130 RETNPYRN---EGLVENVKEFSQTHSRKQHGKK 145
            + +   N   +   E+  ++SQ  S  Q   K
Sbjct: 124 LQKSVGGNKIEQTFPESTLDYSQGFSATQFQDK 154

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g01160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9K4	5.7e-09	33.33	Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1	[more]

BLAST of Cp4.1LG11g01160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546846.1	2.23e-114	100.00	uncharacterized protein LOC111805836 [Cucurbita pepo subsp. pepo]	[more]
KAG7029296.1	7.32e-112	97.11	hypothetical protein SDJN02_07634, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6598325.1	2.88e-111	97.09	hypothetical protein SDJN03_08103, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022962515.1	3.95e-111	97.08	uncharacterized protein LOC111462920 [Cucurbita moschata]	[more]
XP_022997597.1	2.65e-107	93.60	uncharacterized protein LOC111492483 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG11g01160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFC4	1.91e-111	97.08	uncharacterized protein LOC111462920 OS=Cucurbita moschata OX=3662 GN=LOC1114629...	[more]
A0A6J1K5J3	1.28e-107	93.60	uncharacterized protein LOC111492483 OS=Cucurbita maxima OX=3661 GN=LOC111492483...	[more]
A0A0A0LR31	6.58e-82	78.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354620 PE=3 SV=1	[more]
A0A1S3BBA3	8.12e-76	75.29	uncharacterized protein LOC103487825 OS=Cucumis melo OX=3656 GN=LOC103487825 PE=...	[more]
A0A6J1BRF5	2.88e-64	66.09	uncharacterized protein LOC111005036 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Cp4.1LG11g01160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33800.1	4.0e-10	33.33	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..168
None	No IPR available	PANTHER	PTHR33347:SF40	SUBFAMILY NOT NAMED	coord: 7..159
IPR044670	SOB-five-Like (SOFL) family	PANTHER	PTHR33347	OSJNBA0091C07.3 PROTEIN	coord: 7..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g01160.1	Cp4.1LG11g01160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009691	cytokinin biosynthetic process
biological_process	GO:0009690	cytokinin metabolic process