Cp4.1LG11g00390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG11g00390
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionanther-specific protein BCP1-like
LocationCp4.1LG11: 213113 .. 213439 (-)
RNA-Seq ExpressionCp4.1LG11g00390
SyntenyCp4.1LG11g00390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACGCCAATTTGTTGTTCTTGCTCTCGTCCTCTTCGCCCTTGTCGGCTATGCCTCCGCAGCGTCCCCCGCCGATTCCCCAAAGGGCTCTGCTAATAACACCGACGTTGGAGATCTCTTGGCTCCCGGCGCTGACAAAGAGATAGGAAACACTGATGGGGGTGACGCTACCGACGGCAGCAACGACGTGGTTGAAGGCCCAATCAGTGGACCTGGCGTTCCTGGAGGTGAATCTGTCCCCGCCGAAGCTCCTAAGAGCGGTGCCTCTGCCGTGGAATTCTCTGCCATGGTAGCGGTTGCCGGATTTTTCTTCTCCCAAATGTAG

mRNA sequence

ATGGCACGCCAATTTGTTGTTCTTGCTCTCGTCCTCTTCGCCCTTGTCGGCTATGCCTCCGCAGCGTCCCCCGCCGATTCCCCAAAGGGCTCTGCTAATAACACCGACGTTGGAGATCTCTTGGCTCCCGGCGCTGACAAAGAGATAGGAAACACTGATGGGGGTGACGCTACCGACGGCAGCAACGACGTGGTTGAAGGCCCAATCAGTGGACCTGGCGTTCCTGGAGGTGAATCTGTCCCCGCCGAAGCTCCTAAGAGCGGTGCCTCTGCCGTGGAATTCTCTGCCATGGTAGCGGTTGCCGGATTTTTCTTCTCCCAAATGTAG

Coding sequence (CDS)

ATGGCACGCCAATTTGTTGTTCTTGCTCTCGTCCTCTTCGCCCTTGTCGGCTATGCCTCCGCAGCGTCCCCCGCCGATTCCCCAAAGGGCTCTGCTAATAACACCGACGTTGGAGATCTCTTGGCTCCCGGCGCTGACAAAGAGATAGGAAACACTGATGGGGGTGACGCTACCGACGGCAGCAACGACGTGGTTGAAGGCCCAATCAGTGGACCTGGCGTTCCTGGAGGTGAATCTGTCCCCGCCGAAGCTCCTAAGAGCGGTGCCTCTGCCGTGGAATTCTCTGCCATGGTAGCGGTTGCCGGATTTTTCTTCTCCCAAATGTAG

Protein sequence

MARQFVVLALVLFALVGYASAASPADSPKGSANNTDVGDLLAPGADKEIGNTDGGDATDGSNDVVEGPISGPGVPGGESVPAEAPKSGASAVEFSAMVAVAGFFFSQM
Homology
BLAST of Cp4.1LG11g00390 vs. NCBI nr
Match: XP_023546325.1 (anther-specific protein BCP1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198 bits (503), Expect = 1.49e-63
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0

Query: 1   MARQFVVLALVLFALVGYASAASPADSPKGSANNTDVGDLLAPGADKEIGNTDGGDATDG 60
           MARQFVVLALVLFALVGYASAASPADSPKGSANNTDVGDLLAPGADKEIGNTDGGDATDG
Sbjct: 1   MARQFVVLALVLFALVGYASAASPADSPKGSANNTDVGDLLAPGADKEIGNTDGGDATDG 60

Query: 61  SNDVVEGPISGPGVPGGESVPAEAPKSGASAVEFSAMVAVAGFFFSQM 108
           SNDVVEGPISGPGVPGGESVPAEAPKSGASAVEFSAMVAVAGFFFSQM
Sbjct: 61  SNDVVEGPISGPGVPGGESVPAEAPKSGASAVEFSAMVAVAGFFFSQM 108

BLAST of Cp4.1LG11g00390 vs. NCBI nr
Match: XP_022962552.1 (anther-specific protein BCP1-like [Cucurbita moschata])

HSP 1 Score: 185 bits (470), Expect = 1.61e-58
Identity = 99/108 (91.67%), Postives = 107/108 (99.07%), Query Frame = 0

Query: 1   MARQFVVLALVLFALVGYASAASPADSPKGSANNTDVGDLLAPGADKEIGNTDGGDATDG 60
           MARQFVVLALVLFA+VG+A+AASP++SPKGSANNTDVGDLLAPGADKEIGNTDGGDAT+G
Sbjct: 1   MARQFVVLALVLFAIVGFATAASPSESPKGSANNTDVGDLLAPGADKEIGNTDGGDATNG 60

Query: 61  SNDVVEGPISGPGVPGGESVPAEAPKSGASAVEFSAMVAVAGFFFSQM 108
           S+DVVEGPI GPGVPGGESVPAEAPKSGASAVEFSA+VAVAGFFFSQM
Sbjct: 61  SDDVVEGPIGGPGVPGGESVPAEAPKSGASAVEFSALVAVAGFFFSQM 108

BLAST of Cp4.1LG11g00390 vs. NCBI nr
Match: XP_022997549.1 (anther-specific protein BCP1-like [Cucurbita maxima])

HSP 1 Score: 177 bits (448), Expect = 4.02e-55
Identity = 98/111 (88.29%), Postives = 105/111 (94.59%), Query Frame = 0

Query: 1   MARQFVVLALVLFALVGYASAASPADSPKGSANNTDVGDLLAPGADKEIGNTDGGDATDG 60
           MARQFVVLAL+LFALVG+A AASPA+SPKGSANNTDVGDLLAPGADKEIGNTDGGDATDG
Sbjct: 1   MARQFVVLALLLFALVGFACAASPAESPKGSANNTDVGDLLAPGADKEIGNTDGGDATDG 60

Query: 61  SNDVVEGPISGPGVPGGESVPAEAPKSGASAVEFSA---MVAVAGFFFSQM 108
           S+DVVEGPI GPGVPGGESVPAEAPKSGASAVE SA   +VAVAG+FFSQ+
Sbjct: 61  SDDVVEGPIGGPGVPGGESVPAEAPKSGASAVELSAVAALVAVAGYFFSQV 111

BLAST of Cp4.1LG11g00390 vs. NCBI nr
Match: KAG6598249.1 (Protein terminal ear1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181 bits (460), Expect = 9.77e-51
Identity = 97/108 (89.81%), Postives = 106/108 (98.15%), Query Frame = 0

Query: 1   MARQFVVLALVLFALVGYASAASPADSPKGSANNTDVGDLLAPGADKEIGNTDGGDATDG 60
           MARQFVVLALVLFA+VG+A+AASP++SPKGSANNTDVGDLLAPGADKEIGNTDGGDAT+G
Sbjct: 1   MARQFVVLALVLFAIVGFATAASPSESPKGSANNTDVGDLLAPGADKEIGNTDGGDATNG 60

Query: 61  SNDVVEGPISGPGVPGGESVPAEAPKSGASAVEFSAMVAVAGFFFSQM 108
           S+DVVEGPI GPGVPGGESVPAEAPKSGASAV+FSA+VAVAGF FSQM
Sbjct: 61  SDDVVEGPIGGPGVPGGESVPAEAPKSGASAVKFSALVAVAGFLFSQM 108

BLAST of Cp4.1LG11g00390 vs. NCBI nr
Match: KAG7029226.1 (hypothetical protein SDJN02_07564, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 150 bits (380), Expect = 1.27e-44
Identity = 79/87 (90.80%), Postives = 86/87 (98.85%), Query Frame = 0

Query: 1  MARQFVVLALVLFALVGYASAASPADSPKGSANNTDVGDLLAPGADKEIGNTDGGDATDG 60
          MARQFVVLALVLFA+VG+A+AASP++SPKGSANNTDVGDLLAPGADKEIGNTDGGDAT+G
Sbjct: 1  MARQFVVLALVLFAIVGFATAASPSESPKGSANNTDVGDLLAPGADKEIGNTDGGDATNG 60

Query: 61 SNDVVEGPISGPGVPGGESVPAEAPKS 87
          S+DVVEGPI GPGVPGGESVPAEAPKS
Sbjct: 61 SDDVVEGPIGGPGVPGGESVPAEAPKS 87

BLAST of Cp4.1LG11g00390 vs. ExPASy TrEMBL
Match: A0A6J1HCZ7 (anther-specific protein BCP1-like OS=Cucurbita moschata OX=3662 GN=LOC111462951 PE=4 SV=1)

HSP 1 Score: 185 bits (470), Expect = 7.81e-59
Identity = 99/108 (91.67%), Postives = 107/108 (99.07%), Query Frame = 0

Query: 1   MARQFVVLALVLFALVGYASAASPADSPKGSANNTDVGDLLAPGADKEIGNTDGGDATDG 60
           MARQFVVLALVLFA+VG+A+AASP++SPKGSANNTDVGDLLAPGADKEIGNTDGGDAT+G
Sbjct: 1   MARQFVVLALVLFAIVGFATAASPSESPKGSANNTDVGDLLAPGADKEIGNTDGGDATNG 60

Query: 61  SNDVVEGPISGPGVPGGESVPAEAPKSGASAVEFSAMVAVAGFFFSQM 108
           S+DVVEGPI GPGVPGGESVPAEAPKSGASAVEFSA+VAVAGFFFSQM
Sbjct: 61  SDDVVEGPIGGPGVPGGESVPAEAPKSGASAVEFSALVAVAGFFFSQM 108

BLAST of Cp4.1LG11g00390 vs. ExPASy TrEMBL
Match: A0A6J1KBR3 (anther-specific protein BCP1-like OS=Cucurbita maxima OX=3661 GN=LOC111492442 PE=4 SV=1)

HSP 1 Score: 177 bits (448), Expect = 1.94e-55
Identity = 98/111 (88.29%), Postives = 105/111 (94.59%), Query Frame = 0

Query: 1   MARQFVVLALVLFALVGYASAASPADSPKGSANNTDVGDLLAPGADKEIGNTDGGDATDG 60
           MARQFVVLAL+LFALVG+A AASPA+SPKGSANNTDVGDLLAPGADKEIGNTDGGDATDG
Sbjct: 1   MARQFVVLALLLFALVGFACAASPAESPKGSANNTDVGDLLAPGADKEIGNTDGGDATDG 60

Query: 61  SNDVVEGPISGPGVPGGESVPAEAPKSGASAVEFSA---MVAVAGFFFSQM 108
           S+DVVEGPI GPGVPGGESVPAEAPKSGASAVE SA   +VAVAG+FFSQ+
Sbjct: 61  SDDVVEGPIGGPGVPGGESVPAEAPKSGASAVELSAVAALVAVAGYFFSQV 111

BLAST of Cp4.1LG11g00390 vs. ExPASy TrEMBL
Match: A0A0A0LQR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G349700 PE=4 SV=1)

HSP 1 Score: 114 bits (284), Expect = 1.74e-30
Identity = 69/108 (63.89%), Postives = 81/108 (75.00%), Query Frame = 0

Query: 1   MARQFVVLALVLFALVGYASAASPADSPKGSANNTDVGDLLAPGADKEIGNTDGGDATDG 60
           MARQFVV ALVLFA++G+  AA+PA++PKGSA+   VG  LAPGA+ EIGNT+G DA  G
Sbjct: 1   MARQFVVFALVLFAVIGFTCAATPAEAPKGSADTAGVGAQLAPGAENEIGNTEGADAPAG 60

Query: 61  SNDVVEGPISGPGVPGGESVPAEAPKSGASAVEFSA---MVAVAGFFF 105
           S DVVE P+ GPG   G  VPA AP S ASA+EFSA   + AVAGFFF
Sbjct: 61  SEDVVEAPVGGPGATAGGFVPAPAP-SAASALEFSAAAAVTAVAGFFF 107

BLAST of Cp4.1LG11g00390 vs. ExPASy TrEMBL
Match: A0A1S4DVD7 (classical arabinogalactan protein 11-like OS=Cucumis melo OX=3656 GN=LOC107990709 PE=4 SV=1)

HSP 1 Score: 111 bits (277), Expect = 1.96e-29
Identity = 68/108 (62.96%), Postives = 81/108 (75.00%), Query Frame = 0

Query: 1   MARQFVVLALVLFALVGYASAASPADSPKGSANNTDVGDLLAPGADKEIGNTDGGDATDG 60
           MARQFVV ALVLFA++G+A AASPA++PKGSA++   G  LAP AD  IGNT+G DA  G
Sbjct: 1   MARQFVVFALVLFAVIGFACAASPAEAPKGSADSAGAGATLAPAADNAIGNTEGADAPAG 60

Query: 61  SNDVVEGPISGPGVPGGESVPAEAPKSGASAVEFSAMVAVA---GFFF 105
           SN+VVE P+ GPG      VPA AP SGASA++FSA+ AVA   GFFF
Sbjct: 61  SNEVVEAPVGGPGSAAAGVVPAPAP-SGASALKFSAVAAVAAVAGFFF 107

BLAST of Cp4.1LG11g00390 vs. ExPASy TrEMBL
Match: A0A6J1DFK4 (anther-specific protein BCP1 OS=Momordica charantia OX=3673 GN=LOC111019987 PE=4 SV=1)

HSP 1 Score: 110 bits (274), Expect = 6.48e-29
Identity = 69/111 (62.16%), Postives = 82/111 (73.87%), Query Frame = 0

Query: 1   MARQFVVLALVLFALVGYASAASPADSPKGSANNT--DVGDLLAPGADKEIGNTDGGDAT 60
           MARQFV  ALVLFA+VG+A AASPA+ PK +AN+T  D G   APGAD EIGNTDG  A 
Sbjct: 1   MARQFVAFALVLFAVVGFACAASPAEPPKAAANSTAADAGAAAAPGADNEIGNTDGAAAA 60

Query: 61  DGSN-DVVEGPISGPGVP-GGESVPAEAPKSGASAVEFSAMV---AVAGFF 104
            G+  D+VEGP+ GPG   GG+ VPAE+PKSGA AV+ SA+    A+AGFF
Sbjct: 61  PGAGEDIVEGPVGGPGAAAGGDLVPAESPKSGAEAVKISAVAGVAAIAGFF 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023546325.11.49e-63100.00anther-specific protein BCP1 [Cucurbita pepo subsp. pepo][more]
XP_022962552.11.61e-5891.67anther-specific protein BCP1-like [Cucurbita moschata][more]
XP_022997549.14.02e-5588.29anther-specific protein BCP1-like [Cucurbita maxima][more]
KAG6598249.19.77e-5189.81Protein terminal ear1, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7029226.11.27e-4490.80hypothetical protein SDJN02_07564, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
A0A6J1HCZ77.81e-5991.67anther-specific protein BCP1-like OS=Cucurbita moschata OX=3662 GN=LOC111462951 ... [more]
A0A6J1KBR31.94e-5588.29anther-specific protein BCP1-like OS=Cucurbita maxima OX=3661 GN=LOC111492442 PE... [more]
A0A0A0LQR11.74e-3063.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G349700 PE=4 SV=1[more]
A0A1S4DVD71.96e-2962.96classical arabinogalactan protein 11-like OS=Cucumis melo OX=3656 GN=LOC10799070... [more]
A0A6J1DFK46.48e-2962.16anther-specific protein BCP1 OS=Momordica charantia OX=3673 GN=LOC111019987 PE=4... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g00390.1Cp4.1LG11g00390.1mRNA