Cp4.1LG10g12370 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG10g12370
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCp4.1LG10: 9668418 .. 9669941 (-)
RNA-Seq ExpressionCp4.1LG10g12370
SyntenyCp4.1LG10g12370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTATAGAAATCTCCATGGCTGTAAGCTCAAATCTCCTCTCCCTTCAGCCATTTCCTCCCTCCGCTCTCTCTGTTCTCTTCTTCCCCAAATCGAAGCCTCAAGAGATGCCGATTTGGTTTCCCAAGTCCTCGTCCACCACCACAACCCCTTCCACGCCATGGAATCCTCCCTCCAGCTCCACTCAATCTCCTTCTCCTCCCACCTCCTCGATCAAACCCTCCTCCGCCTCACCCACCACTCCAAAATCGCCCTCTCCCTCTTCCACTACGCCAAATCCCTCCCCTTCAACCCCCTCTCCACTTCCTCCTACAACATACTCATCGACATCCTCGCCAAAGTTCGCCAGTTCGACGCCGCCTGGCATCTCATCCTCCAAATGGATCACAAGGGTACCGAGACTTTTCTCTTGCTGATTCGCCGCTTGATTTCTGCTGGCCTAACTCGCCAGGCCGTTCGAGCTTTTGATGACATTGAGGGGCTTACTGGAAACAAGGTACGAACCGATGAATTTTGCTATTTATTGGATACCCTTTGTAAGTATGGCTATGTGAAAGTTGCGGCGGAGGTTTTTAACAAGAGGAAGGCGGAGTTTCATGTTGATGTCAAGATTTATACGGTTTTGATATATGGGTGGTGTAAGATTGGGCGATTTGAGATGGCGGAGAGGTTTTTGAAGGATATGATCGGGCGTGGGATTGAACCGAATGTGGTTACTTATAATGTTTTGTTGAATGGGGTTTGCAGGAGGGCGAGTTTGCATCCGGAGGGGAGGTTTGAGCAGACAATTAGGACTGCAGAGAAGGTGTTCGATGAAATGCGTCAGAGAGGGATTGATCCTGATGTGACCAGTTTCTCTATTGTGCTTCATGTGTATAGCCGTGCCCACAAGCCGGAGCTATCACTTGATAAGTTGAAGCAGATGAAAGAGCTTGGCATCTCCCCGACCGTCGCTACATATACTTCGGTGATCAAATGCCTCTGTTCTTGTGGGAGACTCGAGGAGGCCGAAAACTTGGTAGGAGAAATGGTGAGAAATGGAATCTCTCCATCCCCTGCAACTTATAATTGTTTCTTCAAAGAGTACAGAGGTAGAAAGGATGGGGCAGGTGCTTTGAGATTGTACAAGAAGATGAGGGAGGATTGTCTATATGCTGCTCCTAGTTTGCATACCTATAACATATTACTGAGCTTGTTTCTAAATCTTGACAAGAAGGAGACACTGAAAGAGGTGTGGAATGATATGAAGGAGAGCGGGATTGGGCCGGATTTGGATTCGTATACGACGATGATCCACGGGTTGTGCGAGAAGCAGAGATGGAGAGAGGCCTGTCAATTTTTTGTTGAGATGATTGAAAGGGGGTTTCTTCCCCAGAAGGTGACCTTTGAGATGCTTTACAGAGGGTTGATACAGTCTGATATGTTGAGAACTTGGAGGAGATTGAAGAAGAAACTGGAAGAAGAGTCTATAACTTATGCCTCTGAGTTCAAAAACTATCACATTAAGCCTTACAGGAGATGA

mRNA sequence

ATGGCGTATAGAAATCTCCATGGCTGTAAGCTCAAATCTCCTCTCCCTTCAGCCATTTCCTCCCTCCGCTCTCTCTGTTCTCTTCTTCCCCAAATCGAAGCCTCAAGAGATGCCGATTTGGTTTCCCAAGTCCTCGTCCACCACCACAACCCCTTCCACGCCATGGAATCCTCCCTCCAGCTCCACTCAATCTCCTTCTCCTCCCACCTCCTCGATCAAACCCTCCTCCGCCTCACCCACCACTCCAAAATCGCCCTCTCCCTCTTCCACTACGCCAAATCCCTCCCCTTCAACCCCCTCTCCACTTCCTCCTACAACATACTCATCGACATCCTCGCCAAAGTTCGCCAGTTCGACGCCGCCTGGCATCTCATCCTCCAAATGGATCACAAGGGTACCGAGACTTTTCTCTTGCTGATTCGCCGCTTGATTTCTGCTGGCCTAACTCGCCAGGCCGTTCGAGCTTTTGATGACATTGAGGGGCTTACTGGAAACAAGGTACGAACCGATGAATTTTGCTATTTATTGGATACCCTTTGTAAGTATGGCTATGTGAAAGTTGCGGCGGAGGTTTTTAACAAGAGGAAGGCGGAGTTTCATGTTGATGTCAAGATTTATACGGTTTTGATATATGGGTGGTGTAAGATTGGGCGATTTGAGATGGCGGAGAGGTTTTTGAAGGATATGATCGGGCGTGGGATTGAACCGAATGTGGTTACTTATAATGTTTTGTTGAATGGGGTTTGCAGGAGGGCGAGTTTGCATCCGGAGGGGAGGTTTGAGCAGACAATTAGGACTGCAGAGAAGGTGTTCGATGAAATGCGTCAGAGAGGGATTGATCCTGATGTGACCAGTTTCTCTATTGTGCTTCATGTGTATAGCCGTGCCCACAAGCCGGAGCTATCACTTGATAAGTTGAAGCAGATGAAAGAGCTTGGCATCTCCCCGACCGTCGCTACATATACTTCGGTGATCAAATGCCTCTGTTCTTGTGGGAGACTCGAGGAGGCCGAAAACTTGGTAGGAGAAATGGTGAGAAATGGAATCTCTCCATCCCCTGCAACTTATAATTGTTTCTTCAAAGAGTACAGAGGTAGAAAGGATGGGGCAGGTGCTTTGAGATTGTACAAGAAGATGAGGGAGGATTGTCTATATGCTGCTCCTAGTTTGCATACCTATAACATATTACTGAGCTTGTTTCTAAATCTTGACAAGAAGGAGACACTGAAAGAGGTGTGGAATGATATGAAGGAGAGCGGGATTGGGCCGGATTTGGATTCGTATACGACGATGATCCACGGGTTGTGCGAGAAGCAGAGATGGAGAGAGGCCTGTCAATTTTTTGTTGAGATGATTGAAAGGGGGTTTCTTCCCCAGAAGGTGACCTTTGAGATGCTTTACAGAGGGTTGATACAGTCTGATATGTTGAGAACTTGGAGGAGATTGAAGAAGAAACTGGAAGAAGAGTCTATAACTTATGCCTCTGAGTTCAAAAACTATCACATTAAGCCTTACAGGAGATGA

Coding sequence (CDS)

ATGGCGTATAGAAATCTCCATGGCTGTAAGCTCAAATCTCCTCTCCCTTCAGCCATTTCCTCCCTCCGCTCTCTCTGTTCTCTTCTTCCCCAAATCGAAGCCTCAAGAGATGCCGATTTGGTTTCCCAAGTCCTCGTCCACCACCACAACCCCTTCCACGCCATGGAATCCTCCCTCCAGCTCCACTCAATCTCCTTCTCCTCCCACCTCCTCGATCAAACCCTCCTCCGCCTCACCCACCACTCCAAAATCGCCCTCTCCCTCTTCCACTACGCCAAATCCCTCCCCTTCAACCCCCTCTCCACTTCCTCCTACAACATACTCATCGACATCCTCGCCAAAGTTCGCCAGTTCGACGCCGCCTGGCATCTCATCCTCCAAATGGATCACAAGGGTACCGAGACTTTTCTCTTGCTGATTCGCCGCTTGATTTCTGCTGGCCTAACTCGCCAGGCCGTTCGAGCTTTTGATGACATTGAGGGGCTTACTGGAAACAAGGTACGAACCGATGAATTTTGCTATTTATTGGATACCCTTTGTAAGTATGGCTATGTGAAAGTTGCGGCGGAGGTTTTTAACAAGAGGAAGGCGGAGTTTCATGTTGATGTCAAGATTTATACGGTTTTGATATATGGGTGGTGTAAGATTGGGCGATTTGAGATGGCGGAGAGGTTTTTGAAGGATATGATCGGGCGTGGGATTGAACCGAATGTGGTTACTTATAATGTTTTGTTGAATGGGGTTTGCAGGAGGGCGAGTTTGCATCCGGAGGGGAGGTTTGAGCAGACAATTAGGACTGCAGAGAAGGTGTTCGATGAAATGCGTCAGAGAGGGATTGATCCTGATGTGACCAGTTTCTCTATTGTGCTTCATGTGTATAGCCGTGCCCACAAGCCGGAGCTATCACTTGATAAGTTGAAGCAGATGAAAGAGCTTGGCATCTCCCCGACCGTCGCTACATATACTTCGGTGATCAAATGCCTCTGTTCTTGTGGGAGACTCGAGGAGGCCGAAAACTTGGTAGGAGAAATGGTGAGAAATGGAATCTCTCCATCCCCTGCAACTTATAATTGTTTCTTCAAAGAGTACAGAGGTAGAAAGGATGGGGCAGGTGCTTTGAGATTGTACAAGAAGATGAGGGAGGATTGTCTATATGCTGCTCCTAGTTTGCATACCTATAACATATTACTGAGCTTGTTTCTAAATCTTGACAAGAAGGAGACACTGAAAGAGGTGTGGAATGATATGAAGGAGAGCGGGATTGGGCCGGATTTGGATTCGTATACGACGATGATCCACGGGTTGTGCGAGAAGCAGAGATGGAGAGAGGCCTGTCAATTTTTTGTTGAGATGATTGAAAGGGGGTTTCTTCCCCAGAAGGTGACCTTTGAGATGCTTTACAGAGGGTTGATACAGTCTGATATGTTGAGAACTTGGAGGAGATTGAAGAAGAAACTGGAAGAAGAGTCTATAACTTATGCCTCTGAGTTCAAAAACTATCACATTAAGCCTTACAGGAGATGA

Protein sequence

MAYRNLHGCKLKSPLPSAISSLRSLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQLHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDAAWHLILQMDHKGTETFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLCKYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVTYNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFFKEYRGRKDGAGALRLYKKMREDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESGIGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWRRLKKKLEEESITYASEFKNYHIKPYRR
Homology
BLAST of Cp4.1LG10g12370 vs. ExPASy Swiss-Prot
Match: Q0WP85 (Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g13420 PE=2 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 1.6e-187
Identity = 317/480 (66.04%), Postives = 389/480 (81.04%), Query Frame = 0

Query: 29  LPQIEASRDADLVSQVLVHHHNPFHAMESSLQLHSISFSSHLLDQTLLRLTHHSKIALSL 88
           LP++E S DA+L+SQ+L+ +HNPFH MESSLQL+ IS + +L+ QTLLRL H+SKIALS 
Sbjct: 32  LPKLEPSSDAELISQMLITNHNPFHFMESSLQLNGISLTPNLIHQTLLRLRHNSKIALSF 91

Query: 89  FHYAKSLPFNPLSTSSYNILIDILAKVRQFDAAWHLILQMDHKGTETFLLLIRRLISAGL 148
           F Y +SLP    + +S+N++IDIL +VRQFD    LI++MD    ETFL+L++RLI+AGL
Sbjct: 92  FQYLRSLPSPSTTPTSFNLIIDILGRVRQFDVVRQLIVEMDQTSPETFLILVKRLIAAGL 151

Query: 149 TRQAVRAFDDIE-GLTGNKVRTDEFCYLLDTLCKYGYVKVAAEVFNKRKAEFHVDVKIYT 208
           TRQAVRAFDD    L   + R  EF +LLDTLCKYGY K+A  VFN+RK EF  D K+YT
Sbjct: 152 TRQAVRAFDDAPCFLENRRFRLVEFGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYT 211

Query: 209 VLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVTYNVLLNGVCRRASLHPEGRFEQTIRTA 268
           +LI GWCK+ R +MAE+FL +MI  GIEPNVVTYNVLLNG+CR ASLHPE RFE+ +R A
Sbjct: 212 ILIAGWCKLRRIDMAEKFLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNA 271

Query: 269 EKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKC 328
           EKVFDEMRQRGI+PDVTSFSIVLH+YSRAHK EL+LDK+K MK  GISPT+ TYTSV+KC
Sbjct: 272 EKVFDEMRQRGIEPDVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKC 331

Query: 329 LCSCGRLEEAENLVGEMVRNGISPSPATYNCFFKEYRGRKDGAGALRLYKKMREDCLYAA 388
           LCSCGRLEEAE L+  MV +GISPS ATYNCFFKEY+GRKD  GA+ LY+KM+       
Sbjct: 332 LCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNG--LCK 391

Query: 389 PSLHTYNILLSLFLNLDKKETLKEVWNDMKESGIGPDLDSYTTMIHGLCEKQRWREACQF 448
           PS  TYN+LL  F+NL K ET+KE+W+D+K S  GPDLDSYT+++HGLC K++W+EAC +
Sbjct: 392 PSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGY 451

Query: 449 FVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWRRLKKKLEEESITYASEFKNYHIKPYRR 508
           FVEMIERGFLPQK+TFE LY+GLIQS+ +RTWRRLKKKL+EESIT+ SEF+ Y  +PY+R
Sbjct: 452 FVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRLKKKLDEESITFGSEFQRYPFEPYKR 509

BLAST of Cp4.1LG10g12370 vs. ExPASy Swiss-Prot
Match: Q9LN22 (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g20300 PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.9e-53
Identity = 128/415 (30.84%), Postives = 211/415 (50.84%), Query Frame = 0

Query: 85  ALSLFHYAKSL-PFNPLSTSSYNILIDILAKVRQFDAAWHLILQMDHKGT----ETFLLL 144
           +L+ F++A S   ++  S   YN +ID+  KVRQFD AWHLI  M  +      ETF +L
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192

Query: 145 IRRLISAGLTRQAVRAFDDIE--GLTGNKVRTDEFCYLLDTLCKYGYVKVAAEVFNKRKA 204
           IRR + AGL  +AV  F+ +E  G   +K+    F  ++  L +      A   F+  K 
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKI---AFSIVISNLSRKRRASEAQSFFDSLKD 252

Query: 205 EFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVTYNVLLNGVCRRASLHPE 264
            F  DV +YT L+ GWC+ G    AE+  K+M   GIEPNV TY+++++ +CR       
Sbjct: 253 RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQ---- 312

Query: 265 GRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPT 324
                 I  A  VF +M   G  P+  +F+ ++ V+ +A + E  L    QMK+LG  P 
Sbjct: 313 ------ISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPD 372

Query: 325 VATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFFKEYRGRKDGAGALRLYK 384
             TY  +I+  C    LE A  ++  M++     + +T+N  F+    ++D  GA R+Y 
Sbjct: 373 TITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYS 432

Query: 385 KMREDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESGIGPDLDSYTTMIHGLCE 444
           KM E      P+  TYNIL+ +F+     + + ++  +M +  + P++++Y  ++   C 
Sbjct: 433 KMME--AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCG 492

Query: 445 KQRWREACQFFVEMIERGFL-PQKVTFEMLYRGLIQSDMLRTWRRLKKKLEEESI 492
              W  A + F EM+E   L P    +EM+   L ++  L+    L +K+ ++ +
Sbjct: 493 MGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532

BLAST of Cp4.1LG10g12370 vs. ExPASy Swiss-Prot
Match: Q9SSR6 (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g52640 PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.5e-52
Identity = 145/478 (30.33%), Postives = 231/478 (48.33%), Query Frame = 0

Query: 21  SLRSLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQLHSISFSSHLLDQTLLRLTH 80
           S R   +LL    +    + +S+VL  H NP   +E +L  +S   SS+L++Q L R  +
Sbjct: 21  SFRIFSTLLHDPPSPDLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKN 80

Query: 81  HSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDAAWHLILQMDHK-----GTET 140
               A   F +A+ +P    S  SY+IL++IL   +QF   W  +++          ++ 
Sbjct: 81  LGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKV 140

Query: 141 FLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLCKYGYVKVAAEVFNKR 200
           F ++ R    A L  +A RAF+ +    G K   D+   LL +LC   +V  A E F K 
Sbjct: 141 FWIVFRAYSRANLPSEACRAFNRMVEF-GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKA 200

Query: 201 KAEFHV-DVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVTYNVLLNGVCRRASL 260
           K    V   K Y++L+ GW +I     A +   +M+ R    +++ YN LL+ +C+   +
Sbjct: 201 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 260

Query: 261 HPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGI 320
             +G +        K+F EM   G+ PD  SF+I +H Y  A     +   L +MK   +
Sbjct: 261 --DGGY--------KMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDL 320

Query: 321 SPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFFKEYRGRKDGAGALR 380
            P V T+  +IK LC   ++++A  L+ EM++ G +P   TYN     +    +   A +
Sbjct: 321 VPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATK 380

Query: 381 LYKKM-REDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESGIGPDLDSYTTMIH 440
           L  +M R  CL   P  HTYN++L L + + + +   E+W  M E    P + +YT MIH
Sbjct: 381 LLSRMDRTKCL---PDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIH 440

Query: 441 GLCEKQ-RWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWRRLKKKLEEES 491
           GL  K+ +  EAC++F  MI+ G  P   T EML   L+    +     L  K+E  S
Sbjct: 441 GLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSS 484

BLAST of Cp4.1LG10g12370 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.4e-50
Identity = 132/463 (28.51%), Postives = 235/463 (50.76%), Query Frame = 0

Query: 33  EASRDADLVSQVLVHHHNPFHAMESSLQLHSISFSSHLLDQTLLRLTHHSKIALSLFHYA 92
           +AS+DA+ + ++L    +    +E+ L   S+  S  L+++ L +L++   +ALS+F +A
Sbjct: 61  DASQDAERICKILTKFTD--SKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWA 120

Query: 93  KSLPFNPLSTSSYNILIDILAKVRQFDAAWHLILQMDHK---GTETFLLLIRRLISAGLT 152
           ++      +TS+YN LI+ L K++QF   W L+  M  K     ETF L+ RR   A   
Sbjct: 121 ENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKV 180

Query: 153 RQAVRAFDDIEGLTGNKVRTDEFCYLLDTLCKYGYVKVAAEVFNK-RKAEFHVDVKIYTV 212
           ++A+ AF  +E   G K+ + +F  +LDTL K   V  A +VF+K +K  F  D+K YT+
Sbjct: 181 KEAIGAFHKMEEF-GFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTI 240

Query: 213 LIYGWCKIGRFEMAERFLKDMIGRGIEPNVVTYNVLLNGVCRRASLHPEGRFEQTIRTAE 272
           L+ GW +       +   ++M   G EP+VV Y +++N  C+        ++E+ IR   
Sbjct: 241 LLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAK------KYEEAIR--- 300

Query: 273 KVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCL 332
             F+EM QR   P    F  +++      K   +L+  ++ K  G      TY +++   
Sbjct: 301 -FFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAY 360

Query: 333 CSCGRLEEAENLVGEMVRNGISPSPATYNCFFKEYRGRKDGAGALRLYKKMREDCLYAAP 392
           C   R+E+A   V EM   G+ P+  TY+         +    A  +Y+ M        P
Sbjct: 361 CWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS-----CEP 420

Query: 393 SLHTYNILLSLFLNLDKKETLKEVWNDMKESGIGPDLDSYTTMIHGLCEKQRWREACQFF 452
           ++ TY I++ +F N ++ +   ++W++MK  G+ P +  ++++I  LC + +  EAC++F
Sbjct: 421 TVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYF 480

Query: 453 VEMIERGFLPQKVTFEMLYRGLIQ-------SDMLRTWRRLKK 485
            EM++ G  P    F  L + L+        +D++    RL+K
Sbjct: 481 NEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRK 505

BLAST of Cp4.1LG10g12370 vs. ExPASy Swiss-Prot
Match: P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 5.3e-50
Identity = 127/463 (27.43%), Postives = 228/463 (49.24%), Query Frame = 0

Query: 25  LCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQLHSISFSSHLLDQTLLRLTHHSKI 84
           +C    + E + + + + ++L +HH+    +E +L    I     L+ + L R      +
Sbjct: 54  VCPEKHEDEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNL 113

Query: 85  ALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDAAWHLILQMDHKG-----TETFLLL 144
               F +A   P    S      ++ IL+K+RQF A W LI +M          E F++L
Sbjct: 114 GYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVL 173

Query: 145 IRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCY--LLDTLCKYGYVKVAAEVFNKRKA 204
           +RR  SA + ++AV   D+   +    +  DE+ +  LLD LCK G VK A++VF   + 
Sbjct: 174 MRRFASANMVKKAVEVLDE---MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE 233

Query: 205 EFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVTYNVLLNGVCRRASLHPE 264
           +F  +++ +T L+YGWC+ G+   A+  L  M   G+EP++V +  LL+G      +   
Sbjct: 234 KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM--- 293

Query: 265 GRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHK-PELSLDKLKQMKELGISP 324
                    A  + ++MR+RG +P+V  +++++    R  K  + ++    +M+  G   
Sbjct: 294 -------ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEA 353

Query: 325 TVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFFKEYRGRKDGAGALRLY 384
            + TYT++I   C  G +++  +++ +M + G+ PS  TY      +  ++     L L 
Sbjct: 354 DIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELI 413

Query: 385 KKM-REDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESGIGPDLDSYTTMIHGL 444
           +KM R  C    P L  YN+++ L   L + +    +WN+M+ +G+ P +D++  MI+G 
Sbjct: 414 EKMKRRGC---HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGF 473

Query: 445 CEKQRWREACQFFVEMIERGFL--PQKVTFEMLYRGLIQSDML 477
             +    EAC  F EM+ RG    PQ  T + L   L++ D L
Sbjct: 474 TSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKL 500

BLAST of Cp4.1LG10g12370 vs. NCBI nr
Match: XP_023545087.1 (pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1022 bits (2643), Expect = 0.0
Identity = 507/507 (100.00%), Postives = 507/507 (100.00%), Query Frame = 0

Query: 1   MAYRNLHGCKLKSPLPSAISSLRSLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ 60
           MAYRNLHGCKLKSPLPSAISSLRSLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ
Sbjct: 1   MAYRNLHGCKLKSPLPSAISSLRSLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ 60

Query: 61  LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA 120
           LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA
Sbjct: 61  LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA 120

Query: 121 AWHLILQMDHKGTETFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC 180
           AWHLILQMDHKGTETFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC
Sbjct: 121 AWHLILQMDHKGTETFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC 180

Query: 181 KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT 240
           KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT
Sbjct: 181 KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT 240

Query: 241 YNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE 300
           YNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE
Sbjct: 241 YNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE 300

Query: 301 LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF 360
           LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF
Sbjct: 301 LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF 360

Query: 361 KEYRGRKDGAGALRLYKKMREDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESG 420
           KEYRGRKDGAGALRLYKKMREDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESG
Sbjct: 361 KEYRGRKDGAGALRLYKKMREDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESG 420

Query: 421 IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480
           IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR
Sbjct: 421 IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480

Query: 481 RLKKKLEEESITYASEFKNYHIKPYRR 507
           RLKKKLEEESITYASEFKNYHIKPYRR
Sbjct: 481 RLKKKLEEESITYASEFKNYHIKPYRR 507

BLAST of Cp4.1LG10g12370 vs. NCBI nr
Match: KAG6603178.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033490.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1012 bits (2617), Expect = 0.0
Identity = 502/507 (99.01%), Postives = 504/507 (99.41%), Query Frame = 0

Query: 1   MAYRNLHGCKLKSPLPSAISSLRSLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ 60
           MAYRNLHGCKLKSPLPSAISSLR LCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ
Sbjct: 1   MAYRNLHGCKLKSPLPSAISSLRYLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ 60

Query: 61  LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA 120
           LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA
Sbjct: 61  LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA 120

Query: 121 AWHLILQMDHKGTETFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC 180
           AWHLILQMDHKGT+TFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC
Sbjct: 121 AWHLILQMDHKGTDTFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC 180

Query: 181 KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT 240
           KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT
Sbjct: 181 KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT 240

Query: 241 YNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE 300
           YNVLLNGVCRRASLHPEGRFE+TIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE
Sbjct: 241 YNVLLNGVCRRASLHPEGRFERTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE 300

Query: 301 LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF 360
           LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF
Sbjct: 301 LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF 360

Query: 361 KEYRGRKDGAGALRLYKKMREDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESG 420
           KEYRGRKDGAGALRLYKKMREDCL AAPSLHTYNILL LFLNLDKKETLKEVWNDMKESG
Sbjct: 361 KEYRGRKDGAGALRLYKKMREDCLCAAPSLHTYNILLGLFLNLDKKETLKEVWNDMKESG 420

Query: 421 IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480
           IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR
Sbjct: 421 IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480

Query: 481 RLKKKLEEESITYASEFKNYHIKPYRR 507
           RLKKKLEEESITYASEFKNYHIKPYRR
Sbjct: 481 RLKKKLEEESITYASEFKNYHIKPYRR 507

BLAST of Cp4.1LG10g12370 vs. NCBI nr
Match: XP_022928707.1 (pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Cucurbita moschata] >XP_022928709.1 pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1011 bits (2614), Expect = 0.0
Identity = 501/507 (98.82%), Postives = 504/507 (99.41%), Query Frame = 0

Query: 1   MAYRNLHGCKLKSPLPSAISSLRSLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ 60
           MAYRNLHGCKLKSPLPSAISSLR LCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ
Sbjct: 1   MAYRNLHGCKLKSPLPSAISSLRYLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ 60

Query: 61  LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA 120
           LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA
Sbjct: 61  LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA 120

Query: 121 AWHLILQMDHKGTETFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC 180
           AWHLILQMDHKGT+TFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC
Sbjct: 121 AWHLILQMDHKGTDTFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC 180

Query: 181 KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT 240
           KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT
Sbjct: 181 KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT 240

Query: 241 YNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE 300
           YNVLLNGVCRRASLHPEGRFE+TIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE
Sbjct: 241 YNVLLNGVCRRASLHPEGRFERTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE 300

Query: 301 LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF 360
           LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF
Sbjct: 301 LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF 360

Query: 361 KEYRGRKDGAGALRLYKKMREDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESG 420
           KEYRGRKDGAGALRLYKKMREDCL AAPSLHTYNILL LFLNLDKKETLKEVWNDMKESG
Sbjct: 361 KEYRGRKDGAGALRLYKKMREDCLCAAPSLHTYNILLGLFLNLDKKETLKEVWNDMKESG 420

Query: 421 IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480
           IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR
Sbjct: 421 IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480

Query: 481 RLKKKLEEESITYASEFKNYHIKPYRR 507
           RLKKKLEEESITYASEFKNYH+KPYRR
Sbjct: 481 RLKKKLEEESITYASEFKNYHMKPYRR 507

BLAST of Cp4.1LG10g12370 vs. NCBI nr
Match: XP_022967779.1 (pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Cucurbita maxima] >XP_022967780.1 pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 997 bits (2577), Expect = 0.0
Identity = 496/507 (97.83%), Postives = 497/507 (98.03%), Query Frame = 0

Query: 1   MAYRNLHGCKLKSPLPSAISSLRSLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ 60
           MAYRNLHGCKLK PL S ISSLRSL SLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ
Sbjct: 1   MAYRNLHGCKLKFPLSSTISSLRSLSSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ 60

Query: 61  LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA 120
           LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA
Sbjct: 61  LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA 120

Query: 121 AWHLILQMDHKGTETFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC 180
           AWHLILQMDHKGT+TFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC
Sbjct: 121 AWHLILQMDHKGTDTFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC 180

Query: 181 KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT 240
           KYGYVKVAAEVFNKRKAEF VDVKIYTVLIYGWCKIGRFEM ERFLKDMIGRGIEPNVVT
Sbjct: 181 KYGYVKVAAEVFNKRKAEFGVDVKIYTVLIYGWCKIGRFEMGERFLKDMIGRGIEPNVVT 240

Query: 241 YNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE 300
           YNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE
Sbjct: 241 YNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE 300

Query: 301 LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF 360
           LS DKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF
Sbjct: 301 LSFDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF 360

Query: 361 KEYRGRKDGAGALRLYKKMREDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESG 420
           KEYRGRKDGAGALRLYKKMREDCL AAPSLHTYNILL LFLNLDKKETLKEVWNDMKESG
Sbjct: 361 KEYRGRKDGAGALRLYKKMREDCLCAAPSLHTYNILLGLFLNLDKKETLKEVWNDMKESG 420

Query: 421 IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480
           IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR
Sbjct: 421 IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480

Query: 481 RLKKKLEEESITYASEFKNYHIKPYRR 507
           RLKKKLEEESITY SEFKNYHIKPYRR
Sbjct: 481 RLKKKLEEESITYGSEFKNYHIKPYRR 507

BLAST of Cp4.1LG10g12370 vs. NCBI nr
Match: XP_038880859.1 (pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 937 bits (2423), Expect = 0.0
Identity = 462/507 (91.12%), Postives = 483/507 (95.27%), Query Frame = 0

Query: 1   MAYRNLHGCKLKSPLPSAISSLRSLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ 60
           MA R +H     SPLPS IS +R LCSLLPQIEAS+DADLVSQ+L+HHHNPFH+MESSLQ
Sbjct: 1   MALRKVHSF---SPLPSTISYVRFLCSLLPQIEASKDADLVSQILIHHHNPFHSMESSLQ 60

Query: 61  LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA 120
           LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNP+STSSYNILIDI AKVRQFDA
Sbjct: 61  LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPISTSSYNILIDIFAKVRQFDA 120

Query: 121 AWHLILQMDHKGTETFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC 180
           AWHLILQMDHKGT+TFLLLIRRL+SAGLTRQAVRAFDDIEGLTGNKVR DEFCYLLDTLC
Sbjct: 121 AWHLILQMDHKGTDTFLLLIRRLVSAGLTRQAVRAFDDIEGLTGNKVRIDEFCYLLDTLC 180

Query: 181 KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT 240
           +YGYVKVA E+FNKRK EF VD KIYT+LIYGWCKIGRFEM ERFLKDM+GRGIEPNVVT
Sbjct: 181 RYGYVKVAVEIFNKRKGEFGVDAKIYTILIYGWCKIGRFEMGERFLKDMVGRGIEPNVVT 240

Query: 241 YNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE 300
           YNVLLNGVCRRASLHPEGRFE+TIR AEKVFDEMRQRGI+PDVTSFSIVLHV+SRAHKPE
Sbjct: 241 YNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRQRGIEPDVTSFSIVLHVFSRAHKPE 300

Query: 301 LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF 360
           LSLDKLKQMKE+GISPTVATYTSVIKCLCSCGRLE+AENLV EMVR+GISPSPATYNCFF
Sbjct: 301 LSLDKLKQMKEIGISPTVATYTSVIKCLCSCGRLEDAENLVEEMVRSGISPSPATYNCFF 360

Query: 361 KEYRGRKDGAGALRLYKKMREDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESG 420
           KEYRGRKDGAGALRLYKKMR+DCL  APSLHTYNILL+LFLNLDKKETLKEVWNDMKESG
Sbjct: 361 KEYRGRKDGAGALRLYKKMRDDCL-CAPSLHTYNILLALFLNLDKKETLKEVWNDMKESG 420

Query: 421 IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480
            GPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR
Sbjct: 421 RGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480

Query: 481 RLKKKLEEESITYASEFKNYHIKPYRR 507
           RLKKKLEEESITY SEFKNYHIKPY R
Sbjct: 481 RLKKKLEEESITYGSEFKNYHIKPYVR 503

BLAST of Cp4.1LG10g12370 vs. ExPASy TrEMBL
Match: A0A6J1ELM3 (pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111435538 PE=4 SV=1)

HSP 1 Score: 1011 bits (2614), Expect = 0.0
Identity = 501/507 (98.82%), Postives = 504/507 (99.41%), Query Frame = 0

Query: 1   MAYRNLHGCKLKSPLPSAISSLRSLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ 60
           MAYRNLHGCKLKSPLPSAISSLR LCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ
Sbjct: 1   MAYRNLHGCKLKSPLPSAISSLRYLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ 60

Query: 61  LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA 120
           LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA
Sbjct: 61  LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA 120

Query: 121 AWHLILQMDHKGTETFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC 180
           AWHLILQMDHKGT+TFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC
Sbjct: 121 AWHLILQMDHKGTDTFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC 180

Query: 181 KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT 240
           KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT
Sbjct: 181 KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT 240

Query: 241 YNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE 300
           YNVLLNGVCRRASLHPEGRFE+TIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE
Sbjct: 241 YNVLLNGVCRRASLHPEGRFERTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE 300

Query: 301 LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF 360
           LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF
Sbjct: 301 LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF 360

Query: 361 KEYRGRKDGAGALRLYKKMREDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESG 420
           KEYRGRKDGAGALRLYKKMREDCL AAPSLHTYNILL LFLNLDKKETLKEVWNDMKESG
Sbjct: 361 KEYRGRKDGAGALRLYKKMREDCLCAAPSLHTYNILLGLFLNLDKKETLKEVWNDMKESG 420

Query: 421 IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480
           IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR
Sbjct: 421 IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480

Query: 481 RLKKKLEEESITYASEFKNYHIKPYRR 507
           RLKKKLEEESITYASEFKNYH+KPYRR
Sbjct: 481 RLKKKLEEESITYASEFKNYHMKPYRR 507

BLAST of Cp4.1LG10g12370 vs. ExPASy TrEMBL
Match: A0A6J1HXQ0 (pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111467194 PE=4 SV=1)

HSP 1 Score: 997 bits (2577), Expect = 0.0
Identity = 496/507 (97.83%), Postives = 497/507 (98.03%), Query Frame = 0

Query: 1   MAYRNLHGCKLKSPLPSAISSLRSLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ 60
           MAYRNLHGCKLK PL S ISSLRSL SLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ
Sbjct: 1   MAYRNLHGCKLKFPLSSTISSLRSLSSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ 60

Query: 61  LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA 120
           LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA
Sbjct: 61  LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA 120

Query: 121 AWHLILQMDHKGTETFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC 180
           AWHLILQMDHKGT+TFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC
Sbjct: 121 AWHLILQMDHKGTDTFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC 180

Query: 181 KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT 240
           KYGYVKVAAEVFNKRKAEF VDVKIYTVLIYGWCKIGRFEM ERFLKDMIGRGIEPNVVT
Sbjct: 181 KYGYVKVAAEVFNKRKAEFGVDVKIYTVLIYGWCKIGRFEMGERFLKDMIGRGIEPNVVT 240

Query: 241 YNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE 300
           YNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE
Sbjct: 241 YNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE 300

Query: 301 LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF 360
           LS DKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF
Sbjct: 301 LSFDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF 360

Query: 361 KEYRGRKDGAGALRLYKKMREDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESG 420
           KEYRGRKDGAGALRLYKKMREDCL AAPSLHTYNILL LFLNLDKKETLKEVWNDMKESG
Sbjct: 361 KEYRGRKDGAGALRLYKKMREDCLCAAPSLHTYNILLGLFLNLDKKETLKEVWNDMKESG 420

Query: 421 IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480
           IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR
Sbjct: 421 IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480

Query: 481 RLKKKLEEESITYASEFKNYHIKPYRR 507
           RLKKKLEEESITY SEFKNYHIKPYRR
Sbjct: 481 RLKKKLEEESITYGSEFKNYHIKPYRR 507

BLAST of Cp4.1LG10g12370 vs. ExPASy TrEMBL
Match: A0A0A0KZ73 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G506840 PE=4 SV=1)

HSP 1 Score: 911 bits (2354), Expect = 0.0
Identity = 448/507 (88.36%), Postives = 474/507 (93.49%), Query Frame = 0

Query: 1   MAYRNLHGCKLKSPLPSAISSLRSLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ 60
           MA+  LH   L SPLPS ISS+R L SLLPQI+ S+DADLVSQ+L+HHHNPFH+MESSLQ
Sbjct: 1   MAFTKLHSSSLISPLPSIISSIRFLSSLLPQIQPSKDADLVSQILLHHHNPFHSMESSLQ 60

Query: 61  LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA 120
           LHSISFSSHLLDQTLLRLTHHSKIALS F YA SLP NP+ST+SYNIL+DILAKVRQFDA
Sbjct: 61  LHSISFSSHLLDQTLLRLTHHSKIALSFFDYANSLPSNPISTTSYNILLDILAKVRQFDA 120

Query: 121 AWHLILQMDHKGTETFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC 180
           AWHLILQMDHKGT+TFLLLIRRLIS+G TRQA+RAFDDIEGLTGNKV  D+FCYLLD LC
Sbjct: 121 AWHLILQMDHKGTDTFLLLIRRLISSGRTRQAIRAFDDIEGLTGNKVGIDDFCYLLDVLC 180

Query: 181 KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT 240
           KYGYVKVA EVFNKRK EF VDVKIYT+LIYGWCKIGRFEMAERFLKDM+ RGIEPNVVT
Sbjct: 181 KYGYVKVAVEVFNKRKEEFGVDVKIYTILIYGWCKIGRFEMAERFLKDMVERGIEPNVVT 240

Query: 241 YNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE 300
           YNVLLNGVCRRASLHPEGRFE+TIR AEKVFDEMR+RGI+PDVTSFSIVLHVYSRAHKPE
Sbjct: 241 YNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEMRKRGIEPDVTSFSIVLHVYSRAHKPE 300

Query: 301 LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF 360
           LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLE+ ENL+ EMVR+GISPSP TYNCFF
Sbjct: 301 LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDGENLIEEMVRSGISPSPTTYNCFF 360

Query: 361 KEYRGRKDGAGALRLYKKMREDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESG 420
           KEYRGRKDGAGALRLYKKMREDCL  APSLHTYNILL+LFLNLDKKETLKE+WNDMKESG
Sbjct: 361 KEYRGRKDGAGALRLYKKMREDCL-CAPSLHTYNILLALFLNLDKKETLKELWNDMKESG 420

Query: 421 IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480
           +GPDLDSYTT+IHGLCEKQRW EACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR
Sbjct: 421 VGPDLDSYTTIIHGLCEKQRWSEACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480

Query: 481 RLKKKLEEESITYASEFKNYHIKPYRR 507
           RLKKKLEEES TY SE KNYHIKPY R
Sbjct: 481 RLKKKLEEESKTYGSELKNYHIKPYMR 506

BLAST of Cp4.1LG10g12370 vs. ExPASy TrEMBL
Match: A0A1S3B4Y0 (pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103486071 PE=4 SV=1)

HSP 1 Score: 911 bits (2354), Expect = 0.0
Identity = 449/507 (88.56%), Postives = 474/507 (93.49%), Query Frame = 0

Query: 1   MAYRNLHGCKLKSPLPSAISSLRSLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQ 60
           MA+  LH   L SPLPS IS +R L SLLPQI+ S DADLVSQ+L+HHHNPFH+MESSLQ
Sbjct: 1   MAFAKLHCSTLISPLPSTISFIRFLSSLLPQIQPSEDADLVSQILLHHHNPFHSMESSLQ 60

Query: 61  LHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDA 120
           LHSISFSSHLLDQTLLRLTHHSKIALS F YA +LP NP+ST+SYNIL+DILAKVRQFDA
Sbjct: 61  LHSISFSSHLLDQTLLRLTHHSKIALSFFDYANTLPSNPISTTSYNILLDILAKVRQFDA 120

Query: 121 AWHLILQMDHKGTETFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLC 180
           AWHLILQMDHKGT+TFLLLIRRLIS+G TRQA+RAFDDIEGLTGNKV  D+FCYLLD LC
Sbjct: 121 AWHLILQMDHKGTDTFLLLIRRLISSGRTRQAIRAFDDIEGLTGNKVGIDDFCYLLDVLC 180

Query: 181 KYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVT 240
           KYGYVKVA EVFNKRK EF VDVKIYTVLIYGWCKIGRFEMAERFLKDM+ RGIEPNVVT
Sbjct: 181 KYGYVKVAVEVFNKRKEEFGVDVKIYTVLIYGWCKIGRFEMAERFLKDMVERGIEPNVVT 240

Query: 241 YNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPE 300
           YNVLLNGVCRRASLHPEGRFE+TIR AEKVFDEMR+RGI+PDVTSFSIVLHVYSRAHKPE
Sbjct: 241 YNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRKRGIEPDVTSFSIVLHVYSRAHKPE 300

Query: 301 LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFF 360
           LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLE+AENLVGEMVR+GISPSP TYNCFF
Sbjct: 301 LSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLVGEMVRSGISPSPTTYNCFF 360

Query: 361 KEYRGRKDGAGALRLYKKMREDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESG 420
           KEYRGRKDGAGALRLYK+MREDCL  APSLHTYNILL+LFLNLDKK+TLKE+WNDMK SG
Sbjct: 361 KEYRGRKDGAGALRLYKRMREDCL-CAPSLHTYNILLALFLNLDKKQTLKELWNDMKASG 420

Query: 421 IGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480
           +GPDLDSYTTMIHGLCEKQRW EACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR
Sbjct: 421 VGPDLDSYTTMIHGLCEKQRWSEACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWR 480

Query: 481 RLKKKLEEESITYASEFKNYHIKPYRR 507
           RLKKKLEEES TY SEFKNYHIKPY R
Sbjct: 481 RLKKKLEEESKTYGSEFKNYHIKPYMR 506

BLAST of Cp4.1LG10g12370 vs. ExPASy TrEMBL
Match: A0A5D3C0G2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001680 PE=4 SV=1)

HSP 1 Score: 841 bits (2173), Expect = 5.03e-306
Identity = 413/453 (91.17%), Postives = 432/453 (95.36%), Query Frame = 0

Query: 55  MESSLQLHSISFSSHLLDQTLLRLTHHSKIALSLFHYAKSLPFNPLSTSSYNILIDILAK 114
           MESSLQLHSISFSSHLLDQTLLRLTHHSKIALS F YA +LP NP+ST+SYNIL+DILAK
Sbjct: 1   MESSLQLHSISFSSHLLDQTLLRLTHHSKIALSFFDYANTLPSNPISTTSYNILLDILAK 60

Query: 115 VRQFDAAWHLILQMDHKGTETFLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCY 174
           VRQFDAAWHLILQMDHKGT+TFLLLIRRLIS+G TRQA+RAFDDIEGLTGNKV  D+FCY
Sbjct: 61  VRQFDAAWHLILQMDHKGTDTFLLLIRRLISSGRTRQAIRAFDDIEGLTGNKVGIDDFCY 120

Query: 175 LLDTLCKYGYVKVAAEVFNKRKAEFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGI 234
           LLD LCKYGYVKVA EVFNKRK EF VDVKIYTVLIYGWCKIGRFEMAERFLKDM+ RGI
Sbjct: 121 LLDVLCKYGYVKVAVEVFNKRKEEFGVDVKIYTVLIYGWCKIGRFEMAERFLKDMVERGI 180

Query: 235 EPNVVTYNVLLNGVCRRASLHPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYS 294
           EPNVVTYNVLLNGVCRRASLHPEGRFE+TIR AEKVFDEMR+RGI+PDVTSFSIVLHVYS
Sbjct: 181 EPNVVTYNVLLNGVCRRASLHPEGRFEKTIRNAEKVFDEMRKRGIEPDVTSFSIVLHVYS 240

Query: 295 RAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPA 354
           RAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLE+AENLVGEMVR+GISPSP 
Sbjct: 241 RAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDAENLVGEMVRSGISPSPT 300

Query: 355 TYNCFFKEYRGRKDGAGALRLYKKMREDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWN 414
           TYNCFFKEYRGRKDGAGALRLYK+MREDCL  APSLHTYNILL+LFLNLDKK+TLKE+WN
Sbjct: 301 TYNCFFKEYRGRKDGAGALRLYKRMREDCL-CAPSLHTYNILLALFLNLDKKQTLKELWN 360

Query: 415 DMKESGIGPDLDSYTTMIHGLCEKQRWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSD 474
           DMK SG+GPDLDSYTTMIHGLCEKQRW EACQFFVEMIERGFLPQKVTFEMLYRGLIQSD
Sbjct: 361 DMKASGVGPDLDSYTTMIHGLCEKQRWSEACQFFVEMIERGFLPQKVTFEMLYRGLIQSD 420

Query: 475 MLRTWRRLKKKLEEESITYASEFKNYHIKPYRR 507
           MLRTWRRLKKKLEEES TY SEFKNYHIKPY R
Sbjct: 421 MLRTWRRLKKKLEEESKTYGSEFKNYHIKPYMR 452

BLAST of Cp4.1LG10g12370 vs. TAIR 10
Match: AT1G20300.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 210.7 bits (535), Expect = 2.8e-54
Identity = 128/415 (30.84%), Postives = 211/415 (50.84%), Query Frame = 0

Query: 85  ALSLFHYAKSL-PFNPLSTSSYNILIDILAKVRQFDAAWHLILQMDHKGT----ETFLLL 144
           +L+ F++A S   ++  S   YN +ID+  KVRQFD AWHLI  M  +      ETF +L
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192

Query: 145 IRRLISAGLTRQAVRAFDDIE--GLTGNKVRTDEFCYLLDTLCKYGYVKVAAEVFNKRKA 204
           IRR + AGL  +AV  F+ +E  G   +K+    F  ++  L +      A   F+  K 
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKI---AFSIVISNLSRKRRASEAQSFFDSLKD 252

Query: 205 EFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVTYNVLLNGVCRRASLHPE 264
            F  DV +YT L+ GWC+ G    AE+  K+M   GIEPNV TY+++++ +CR       
Sbjct: 253 RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQ---- 312

Query: 265 GRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPT 324
                 I  A  VF +M   G  P+  +F+ ++ V+ +A + E  L    QMK+LG  P 
Sbjct: 313 ------ISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPD 372

Query: 325 VATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFFKEYRGRKDGAGALRLYK 384
             TY  +I+  C    LE A  ++  M++     + +T+N  F+    ++D  GA R+Y 
Sbjct: 373 TITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYS 432

Query: 385 KMREDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESGIGPDLDSYTTMIHGLCE 444
           KM E      P+  TYNIL+ +F+     + + ++  +M +  + P++++Y  ++   C 
Sbjct: 433 KMME--AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCG 492

Query: 445 KQRWREACQFFVEMIERGFL-PQKVTFEMLYRGLIQSDMLRTWRRLKKKLEEESI 492
              W  A + F EM+E   L P    +EM+   L ++  L+    L +K+ ++ +
Sbjct: 493 MGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532

BLAST of Cp4.1LG10g12370 vs. TAIR 10
Match: AT1G52640.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 208.8 bits (530), Expect = 1.1e-53
Identity = 145/478 (30.33%), Postives = 231/478 (48.33%), Query Frame = 0

Query: 21  SLRSLCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQLHSISFSSHLLDQTLLRLTH 80
           S R   +LL    +    + +S+VL  H NP   +E +L  +S   SS+L++Q L R  +
Sbjct: 21  SFRIFSTLLHDPPSPDLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKN 80

Query: 81  HSKIALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDAAWHLILQMDHK-----GTET 140
               A   F +A+ +P    S  SY+IL++IL   +QF   W  +++          ++ 
Sbjct: 81  LGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKV 140

Query: 141 FLLLIRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCYLLDTLCKYGYVKVAAEVFNKR 200
           F ++ R    A L  +A RAF+ +    G K   D+   LL +LC   +V  A E F K 
Sbjct: 141 FWIVFRAYSRANLPSEACRAFNRMVEF-GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKA 200

Query: 201 KAEFHV-DVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVTYNVLLNGVCRRASL 260
           K    V   K Y++L+ GW +I     A +   +M+ R    +++ YN LL+ +C+   +
Sbjct: 201 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 260

Query: 261 HPEGRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGI 320
             +G +        K+F EM   G+ PD  SF+I +H Y  A     +   L +MK   +
Sbjct: 261 --DGGY--------KMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDL 320

Query: 321 SPTVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFFKEYRGRKDGAGALR 380
            P V T+  +IK LC   ++++A  L+ EM++ G +P   TYN     +    +   A +
Sbjct: 321 VPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATK 380

Query: 381 LYKKM-REDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESGIGPDLDSYTTMIH 440
           L  +M R  CL   P  HTYN++L L + + + +   E+W  M E    P + +YT MIH
Sbjct: 381 LLSRMDRTKCL---PDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIH 440

Query: 441 GLCEKQ-RWREACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWRRLKKKLEEES 491
           GL  K+ +  EAC++F  MI+ G  P   T EML   L+    +     L  K+E  S
Sbjct: 441 GLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSS 484

BLAST of Cp4.1LG10g12370 vs. TAIR 10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 202.2 bits (513), Expect = 9.8e-52
Identity = 132/463 (28.51%), Postives = 235/463 (50.76%), Query Frame = 0

Query: 33  EASRDADLVSQVLVHHHNPFHAMESSLQLHSISFSSHLLDQTLLRLTHHSKIALSLFHYA 92
           +AS+DA+ + ++L    +    +E+ L   S+  S  L+++ L +L++   +ALS+F +A
Sbjct: 61  DASQDAERICKILTKFTD--SKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWA 120

Query: 93  KSLPFNPLSTSSYNILIDILAKVRQFDAAWHLILQMDHK---GTETFLLLIRRLISAGLT 152
           ++      +TS+YN LI+ L K++QF   W L+  M  K     ETF L+ RR   A   
Sbjct: 121 ENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKV 180

Query: 153 RQAVRAFDDIEGLTGNKVRTDEFCYLLDTLCKYGYVKVAAEVFNK-RKAEFHVDVKIYTV 212
           ++A+ AF  +E   G K+ + +F  +LDTL K   V  A +VF+K +K  F  D+K YT+
Sbjct: 181 KEAIGAFHKMEEF-GFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTI 240

Query: 213 LIYGWCKIGRFEMAERFLKDMIGRGIEPNVVTYNVLLNGVCRRASLHPEGRFEQTIRTAE 272
           L+ GW +       +   ++M   G EP+VV Y +++N  C+        ++E+ IR   
Sbjct: 241 LLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAK------KYEEAIR--- 300

Query: 273 KVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCL 332
             F+EM QR   P    F  +++      K   +L+  ++ K  G      TY +++   
Sbjct: 301 -FFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAY 360

Query: 333 CSCGRLEEAENLVGEMVRNGISPSPATYNCFFKEYRGRKDGAGALRLYKKMREDCLYAAP 392
           C   R+E+A   V EM   G+ P+  TY+         +    A  +Y+ M        P
Sbjct: 361 CWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS-----CEP 420

Query: 393 SLHTYNILLSLFLNLDKKETLKEVWNDMKESGIGPDLDSYTTMIHGLCEKQRWREACQFF 452
           ++ TY I++ +F N ++ +   ++W++MK  G+ P +  ++++I  LC + +  EAC++F
Sbjct: 421 TVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYF 480

Query: 453 VEMIERGFLPQKVTFEMLYRGLIQ-------SDMLRTWRRLKK 485
            EM++ G  P    F  L + L+        +D++    RL+K
Sbjct: 481 NEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRK 505

BLAST of Cp4.1LG10g12370 vs. TAIR 10
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 200.3 bits (508), Expect = 3.7e-51
Identity = 127/463 (27.43%), Postives = 228/463 (49.24%), Query Frame = 0

Query: 25  LCSLLPQIEASRDADLVSQVLVHHHNPFHAMESSLQLHSISFSSHLLDQTLLRLTHHSKI 84
           +C    + E + + + + ++L +HH+    +E +L    I     L+ + L R      +
Sbjct: 54  VCPEKHEDEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNL 113

Query: 85  ALSLFHYAKSLPFNPLSTSSYNILIDILAKVRQFDAAWHLILQMDHKG-----TETFLLL 144
               F +A   P    S      ++ IL+K+RQF A W LI +M          E F++L
Sbjct: 114 GYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVL 173

Query: 145 IRRLISAGLTRQAVRAFDDIEGLTGNKVRTDEFCY--LLDTLCKYGYVKVAAEVFNKRKA 204
           +RR  SA + ++AV   D+   +    +  DE+ +  LLD LCK G VK A++VF   + 
Sbjct: 174 MRRFASANMVKKAVEVLDE---MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE 233

Query: 205 EFHVDVKIYTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVTYNVLLNGVCRRASLHPE 264
           +F  +++ +T L+YGWC+ G+   A+  L  M   G+EP++V +  LL+G      +   
Sbjct: 234 KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM--- 293

Query: 265 GRFEQTIRTAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHK-PELSLDKLKQMKELGISP 324
                    A  + ++MR+RG +P+V  +++++    R  K  + ++    +M+  G   
Sbjct: 294 -------ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEA 353

Query: 325 TVATYTSVIKCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFFKEYRGRKDGAGALRLY 384
            + TYT++I   C  G +++  +++ +M + G+ PS  TY      +  ++     L L 
Sbjct: 354 DIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELI 413

Query: 385 KKM-REDCLYAAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESGIGPDLDSYTTMIHGL 444
           +KM R  C    P L  YN+++ L   L + +    +WN+M+ +G+ P +D++  MI+G 
Sbjct: 414 EKMKRRGC---HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGF 473

Query: 445 CEKQRWREACQFFVEMIERGFL--PQKVTFEMLYRGLIQSDML 477
             +    EAC  F EM+ RG    PQ  T + L   L++ D L
Sbjct: 474 TSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKL 500

BLAST of Cp4.1LG10g12370 vs. TAIR 10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 200.3 bits (508), Expect = 3.7e-51
Identity = 119/453 (26.27%), Postives = 225/453 (49.67%), Query Frame = 0

Query: 33  EASRDADLVSQVLVHHHNPFHAMESSLQLHSISFSSHLLDQTLLRLTHHSKIALSLFHYA 92
           E + D +   ++L   H+    +E +L    +     L+++ L R      +    F +A
Sbjct: 78  EFASDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWA 137

Query: 93  KSLPFNPLSTSSYNILIDILAKVRQFDAAWHLILQMDHKG-----TETFLLLIRRLISAG 152
              P    S   Y  ++ IL+K+RQF A W LI +M  +       E F++L++R  SA 
Sbjct: 138 AKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASAD 197

Query: 153 LTRQAVRAFDDIEGLTGNKVRTDEFCY--LLDTLCKYGYVKVAAEVFNKRKAEFHVDVKI 212
           + ++A+   D++          DE+ +  LLD LCK+G VK AA++F   +  F V+++ 
Sbjct: 198 MVKKAIEVLDEMPKF---GFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRY 257

Query: 213 YTVLIYGWCKIGRFEMAERFLKDMIGRGIEPNVVTYNVLLNGVCRRASLHPEGRFEQTIR 272
           +T L+YGWC++G+   A+  L  M   G EP++V Y  LL+G      +           
Sbjct: 258 FTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKM----------A 317

Query: 273 TAEKVFDEMRQRGIDPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVI 332
            A  +  +MR+RG +P+   +++++    +  + E ++    +M+       V TYT+++
Sbjct: 318 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 377

Query: 333 KCLCSCGRLEEAENLVGEMVRNGISPSPATYNCFFKEYRGRKDGAGALRLYKKMREDCLY 392
              C  G++++   ++ +M++ G+ PS  TY      +  ++     L L +KMR+  + 
Sbjct: 378 SGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQ--IE 437

Query: 393 AAPSLHTYNILLSLFLNLDKKETLKEVWNDMKESGIGPDLDSYTTMIHGLCEKQRWREAC 452
             P +  YN+++ L   L + +    +WN+M+E+G+ P +D++  MI+GL  +    EA 
Sbjct: 438 YHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEAS 497

Query: 453 QFFVEMIERGF--LPQKVTFEMLYRGLIQSDML 477
             F EM+ RG   + Q  T ++L   +++   L
Sbjct: 498 DHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKL 515

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q0WP851.6e-18766.04Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidop... [more]
Q9LN223.9e-5330.84Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidop... [more]
Q9SSR61.5e-5230.33Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidop... [more]
Q9C9A21.4e-5028.51Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop... [more]
P0C8A05.3e-5027.43Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
XP_023545087.10.0100.00pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Cucur... [more]
KAG6603178.10.099.01Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022928707.10.098.82pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Cucur... [more]
XP_022967779.10.097.83pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Cucur... [more]
XP_038880859.10.091.12pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Benin... [more]
Match NameE-valueIdentityDescription
A0A6J1ELM30.098.82pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like OS=Cuc... [more]
A0A6J1HXQ00.097.83pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like OS=Cuc... [more]
A0A0A0KZ730.088.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G506840 PE=4 SV=1[more]
A0A1S3B4Y00.088.56pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like OS=Cuc... [more]
A0A5D3C0G25.03e-30691.17Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
AT1G20300.12.8e-5430.84Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G52640.11.1e-5330.33Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G71060.19.8e-5228.51Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G49730.13.7e-5127.43Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G65820.13.7e-5126.27Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 259..368
e-value: 1.7E-28
score: 101.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 196..256
e-value: 5.0E-15
score: 57.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 372..503
e-value: 2.5E-24
score: 88.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 49..195
e-value: 7.6E-11
score: 44.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 285..314
e-value: 0.11
score: 12.8
coord: 104..132
e-value: 0.011
score: 15.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 202..250
e-value: 1.4E-14
score: 54.1
coord: 388..436
e-value: 1.7E-11
score: 44.2
coord: 316..362
e-value: 2.3E-12
score: 46.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 391..424
e-value: 9.3E-5
score: 20.4
coord: 205..238
e-value: 2.1E-8
score: 31.8
coord: 104..132
e-value: 1.0E-4
score: 20.3
coord: 285..318
e-value: 6.4E-4
score: 17.7
coord: 320..352
e-value: 1.0E-9
score: 36.0
coord: 427..458
e-value: 1.9E-9
score: 35.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 202..236
score: 12.430172
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 389..423
score: 9.777537
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 317..351
score: 13.186502
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 282..316
score: 10.073492
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 237..281
score: 8.571795
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 101..135
score: 9.448698
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 424..458
score: 12.978237
NoneNo IPR availablePANTHERPTHR45613:SF65OS08G0369200 PROTEINcoord: 23..506
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 23..506

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g12370.1Cp4.1LG10g12370.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding