Cp4.1LG10g12290 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g12290
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	VQ motif-containing protein
Location	Cp4.1LG10: 9255696 .. 9256184 (+)
RNA-Seq Expression	Cp4.1LG10g12290
Synteny	Cp4.1LG10g12290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGGGAGGCAGCCAAAGTCGTGTCGTGTGTACACCTTTGACGACGTTCATACAGACCAACACGAGAACGTTTCAAGAGGTTGTACAACGTCTAACCGGGCCATCAGAAACCCACACGCCACCATCGAAAGCAGTTGGATCAAAGAGGTCAACTACGACCTCCAAACTCCATGAAAGGAGACACTTGACTAGACCAAAGTTGCAAATTGTGAAACCATGTCCTTCCCATTCCAAGCTGGGCGAGAATCCTAGCAACGTTACGAGCCCGGTCGGGATGCCTTCGAAGATCTCGTCAAAGCTGTCGACGGGGGAGGACGAAAAGGAGTCAAATAAGGTGTTAGAAGAGAAGGCAATCAAAGAAAGGGGATTCTATTTGCGTCCATCTCCAAGGTCAAAGGCTGGCTATGCTCAACGAGAGTTGCTTTCATTATTTCCTTTGGAATCCCCCAAACCAACTCAGCACCATGAAACAAAAAAGAATTAA

mRNA sequence

ATGGAGAAGGGAGGCAGCCAAAGTCGTGTCGTGTGTACACCTTTGACGACGTTCATACAGACCAACACGAGAACGTTTCAAGAGGTTGTACAACGTCTAACCGGGCCATCAGAAACCCACACGCCACCATCGAAAGCAGTTGGATCAAAGAGGTCAACTACGACCTCCAAACTCCATGAAAGGAGACACTTGACTAGACCAAAGTTGCAAATTGTGAAACCATGTCCTTCCCATTCCAAGCTGGGCGAGAATCCTAGCAACGTTACGAGCCCGGTCGGGATGCCTTCGAAGATCTCGTCAAAGCTGTCGACGGGGGAGGACGAAAAGGAGTCAAATAAGGTGTTAGAAGAGAAGGCAATCAAAGAAAGGGGATTCTATTTGCGTCCATCTCCAAGGTCAAAGGCTGGCTATGCTCAACGAGAGTTGCTTTCATTATTTCCTTTGGAATCCCCCAAACCAACTCAGCACCATGAAACAAAAAAGAATTAA

Coding sequence (CDS)

ATGGAGAAGGGAGGCAGCCAAAGTCGTGTCGTGTGTACACCTTTGACGACGTTCATACAGACCAACACGAGAACGTTTCAAGAGGTTGTACAACGTCTAACCGGGCCATCAGAAACCCACACGCCACCATCGAAAGCAGTTGGATCAAAGAGGTCAACTACGACCTCCAAACTCCATGAAAGGAGACACTTGACTAGACCAAAGTTGCAAATTGTGAAACCATGTCCTTCCCATTCCAAGCTGGGCGAGAATCCTAGCAACGTTACGAGCCCGGTCGGGATGCCTTCGAAGATCTCGTCAAAGCTGTCGACGGGGGAGGACGAAAAGGAGTCAAATAAGGTGTTAGAAGAGAAGGCAATCAAAGAAAGGGGATTCTATTTGCGTCCATCTCCAAGGTCAAAGGCTGGCTATGCTCAACGAGAGTTGCTTTCATTATTTCCTTTGGAATCCCCCAAACCAACTCAGCACCATGAAACAAAAAAGAATTAA

Protein sequence

MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHERRHLTRPKLQIVKPCPSHSKLGENPSNVTSPVGMPSKISSKLSTGEDEKESNKVLEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHHETKKN

Homology

[Close]

BLAST of Cp4.1LG10g12290 vs. ExPASy Swiss-Prot
Match: Q9FNP0 (VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.0e-31
Identity = 85/164 (51.83%), Postives = 103/164 (62.80%), Query Frame = 0


Query: 3   KGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETH----TPPSKAVGSK-RSTTTSK 62
           KG       C P+TTF+QT+T TF+E+VQRLTGP+E +    TP +  + +  +   TSK
Sbjct: 4   KGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSK 63

Query: 63  LHERRHLTRPKLQIVKPCPSHSKLGENPSN-------VTSPVGMPSKISSKLSTGEDEKE 122
           LHERR   RPKL+IVKP  S    G  PS+       +TSPVG PS + S LS  E E +
Sbjct: 64  LHERRQCMRPKLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGEPD 123

Query: 123 S---NKVLEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESP 152
           S   N   EEKAIKER FYL PSPRSK GY + ELL+LFPL SP
Sbjct: 124 SCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSP 167

[Close]

BLAST of Cp4.1LG10g12290 vs. ExPASy Swiss-Prot
Match: O23660 (VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09
Identity = 59/173 (34.10%), Postives = 85/173 (49.13%), Query Frame = 0


Query: 16  TTFIQTNTRTFQEVVQRLTG--PSETH-----------TPPSKAVGSKRSTTTSKLHERR 75
           TTFI+T+  +F++VVQ LTG   + TH            PP KAV +K+ +++ +L ERR
Sbjct: 36  TTFIRTDPSSFKQVVQLLTGIPKNPTHQPDPRFPPFHSIPPIKAVTNKKQSSSFRLSERR 95

Query: 76  HLTRPKLQIVKPCPSHS----------------KLGENPSNVTSPVGMPSKISSKLSTGE 135
           +  +  L I    P+HS                 L  +   ++ P   P   S   S   
Sbjct: 96  NSMKHYLNI---NPTHSGPPEILTPTILNFPALDLSPDTPLMSDPFYRPGSFSQSPS--- 155

Query: 136 DEKESNKVLEEKAIKERGFYLRPSPRSKAGYAQRELLSLF---PLESPKPTQH 157
           D K S    +E++IKE+GFYLRPSP +     +  LLSLF   P+ SP P+ H
Sbjct: 156 DSKPSFDDDQERSIKEKGFYLRPSPSTTPRDTEPRLLSLFPMTPIHSPAPSPH 202

[Close]

BLAST of Cp4.1LG10g12290 vs. ExPASy Swiss-Prot
Match: Q5M750 (VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.2e-09
Identity = 58/181 (32.04%), Postives = 90/181 (49.72%), Query Frame = 0


Query: 16  TTFIQTNTRTFQEVVQRLTG------------PSETH-------------TPPSKAVGSK 75
           TTF+Q +T +F++VVQ LTG            P+ TH              PP KAV +K
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 76  RSTTTS----KLHERRH-LTRPKLQIVKPC--PSHSKLGENPSNVTSP--VGMPSKISSK 135
           + +++S    +L+ERR+ +   K+  + P   P +S        + SP  +  PS + S 
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSP 176

Query: 136 LS---------TGEDEKESNKV-LEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESP 153
           ++         +G   +  N++  EEKA+KERGFYL PSP +     +  LL LFP+ SP
Sbjct: 177 VTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSP 236

[Close]

BLAST of Cp4.1LG10g12290 vs. ExPASy Swiss-Prot
Match: Q9M8L3 (VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.9e-07
Identity = 54/169 (31.95%), Postives = 78/169 (46.15%), Query Frame = 0


Query: 14  PLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHERRHLT--RPKLQI 73
           P T F+Q +   F+ +VQ+LTG      PP   + S   +  S  H++  LT  +P  ++
Sbjct: 13  PNTMFVQADPSNFRNIVQKLTG-----APPD--ISSSSFSAVSAAHQKLPLTPKKPAFKL 72

Query: 74  VKPCPSHSKLGENPSNVTSPVG---------MPSKIS---------SKLSTGEDEKESNK 133
            +   S  K+    +N+T+P           + S +S         S  S  E+      
Sbjct: 73  HERRQSSKKMELKVNNITNPNDAFSHFHRGFLVSPVSHLDPFWARVSPHSAREEHHAQPD 132

Query: 134 VLEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHHETKKN 163
             E+KAI E+GFY  PSPRS +  A  ELL LFPL SP  T H   + N
Sbjct: 133 KEEQKAIAEKGFYFLPSPRSGSEPAP-ELLPLFPLRSPNGTNHRIHEDN 173

[Close]

BLAST of Cp4.1LG10g12290 vs. ExPASy Swiss-Prot
Match: Q9FHZ3 (VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.1e-04
Identity = 56/191 (29.32%), Postives = 80/191 (41.88%), Query Frame = 0


Query: 16  TTFIQTNTRTFQEVVQRLTGPS------ETHTPPSK----------AVGSKRSTTTSKLH 75
           TTF+Q +T TF++VVQ LTG S      + H  PS           ++   + T + KL+
Sbjct: 49  TTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNKGSSFSIPPIKKTNSFKLY 108

Query: 76  ERRHLTRPKL----------------------------QIVKPCPSHSKLGEN----PSN 135
           ERR                                   Q  +  P +S   EN    PS 
Sbjct: 109 ERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSENILLSPSM 168

Query: 136 VTSP-VGMPSKISSKLSTGEDEKES------NKVLEEKAIKERGFYLRPSPRSKAGYAQR 152
           +  P +G+ S ++   S  +   +S      N   E+KAI ++GFYL PSP S    +Q 
Sbjct: 169 LDFPKLGLNSPVTPLRSNDDPFNKSSPLSLGNSSEEDKAIADKGFYLHPSPVSTPRDSQP 228

[Close]

BLAST of Cp4.1LG10g12290 vs. NCBI nr
Match: XP_022933110.1 (LOW QUALITY PROTEIN: VQ motif-containing protein 31-like [Cucurbita moschata])

HSP 1 Score: 263 bits (672), Expect = 1.37e-87
Identity = 141/162 (87.04%), Postives = 145/162 (89.51%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKGGSQSRVVCTPLTTFIQT+T TF+EVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE
Sbjct: 1   MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60

Query: 61  RRHLTRPKLQIVKPCPSHSKLGENPSNVTSPVGMPSKISSKLSTGEDEKESNKVLEEKAI 120
           RRHLTRPKLQIVKPCPSH K  E+PS VTSPV  PSKI SKL  GEDEKESNKV EEKAI
Sbjct: 61  RRHLTRPKLQIVKPCPSHFKSDEHPSYVTSPVRTPSKILSKLLMGEDEKESNKVEEEKAI 120

Query: 121 KERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHHETKKN 162
           KERGFYL PS RSK GY Q ELLSLFPLESPKPTQ +ETKKN
Sbjct: 121 KERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQRNETKKN 162

[Close]

BLAST of Cp4.1LG10g12290 vs. NCBI nr
Match: XP_031740607.1 (VQ motif-containing protein 31-like [Cucumis sativus])

HSP 1 Score: 213 bits (541), Expect = 1.40e-67
Identity = 120/166 (72.29%), Postives = 134/166 (80.72%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKG SQS V C PLTTF+QT+T+TF+EVVQRLTGPSE+HT  SK  GS+R TTTSKLHE
Sbjct: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE 60

Query: 61  RRHL-TRPKLQIVKPCPSHSK--LGENPSNVTSPVGMPSKISSKLSTGEDEKES-NKVLE 120
           RR L TRPKLQIVKPCPSH K  +GE+PS +TSP+G PSKI SKLS G++EKE  N + E
Sbjct: 61  RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE 120

Query: 121 EKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHHETKKN 162
           EKAIKER FYL PSPRS   YAQ ELLSLFPLESPK   +HETK N
Sbjct: 121 EKAIKERRFYLHPSPRSMPIYAQPELLSLFPLESPKKVSNHETKIN 166

[Close]

BLAST of Cp4.1LG10g12290 vs. NCBI nr
Match: XP_038880928.1 (VQ motif-containing protein 31 [Benincasa hispida])

HSP 1 Score: 211 bits (536), Expect = 6.00e-67
Identity = 117/157 (74.52%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKGGSQS V C PLTTF+QT+T TF+EVVQRLTGPSE+HT   KA GSKR TT SKLHE
Sbjct: 1   MEKGGSQSHVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTMQPKAFGSKRPTTASKLHE 60

Query: 61  RRHLTRPKLQIVKPCPSHSK-LGENPSNVTSPVGMPSKISSKLSTGEDEKES-NKVLEEK 120
           RRHLTRPKLQIVKPCPSH K   E+PS +TSPVG PSKI SKLS G++EK+  N + EEK
Sbjct: 61  RRHLTRPKLQIVKPCPSHFKPTTEHPSYITSPVGTPSKILSKLSIGDEEKDQLNNMEEEK 120

Query: 121 AIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQ 155
           AIKER FYL PSPRS   YAQ ELLSLFPLESPK +Q
Sbjct: 121 AIKERRFYLHPSPRSMPAYAQPELLSLFPLESPKTSQ 157

[Close]

BLAST of Cp4.1LG10g12290 vs. NCBI nr
Match: KAA0045202.1 (VQ motif-containing protein 31 [Cucumis melo var. makuwa] >TYK27349.1 VQ motif-containing protein 31 [Cucumis melo var. makuwa])

HSP 1 Score: 206 bits (525), Expect = 3.80e-65
Identity = 120/166 (72.29%), Postives = 132/166 (79.52%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKGGSQS V C PLTTF+QT+T+TF+EVVQRLTGPSE+H   SK VGS+R TTTSKLHE
Sbjct: 1   MEKGGSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHMMSSKGVGSRRPTTTSKLHE 60

Query: 61  RRHL-TRPKLQIVKPCPSHSKL--GENPSNVTSPVGMPSKISSKLSTGEDEKES-NKVLE 120
           RRHL TRPKLQIVKPCPS+ K    E+ S +TSPVG PSKI SKLS G++EKE  N   E
Sbjct: 61  RRHLITRPKLQIVKPCPSYFKATTSEHLSYITSPVGTPSKILSKLSIGDEEKEELNNKEE 120

Query: 121 EKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHHETKKN 162
           EKAIKER FYL PSPRS A YAQ ELLSLFPLESPK    +ETK N
Sbjct: 121 EKAIKERRFYLHPSPRSMAVYAQPELLSLFPLESPKNVSKNETKIN 166

[Close]

BLAST of Cp4.1LG10g12290 vs. NCBI nr
Match: XP_022149395.1 (VQ motif-containing protein 31 [Momordica charantia])

HSP 1 Score: 196 bits (497), Expect = 6.90e-61
Identity = 112/162 (69.14%), Postives = 124/162 (76.54%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGS-KRSTTTSKLH 60
           MEK  +QS V C PLTTF+QT+T TF+EVVQRLTGPSE+HTPPSKA GS KR   TSKLH
Sbjct: 1   MEKAANQSLVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTPPSKAAGSSKRPIATSKLH 60

Query: 61  ERRHLTRPKLQIVKPCPSH------SKLGENPSNVTSPVGMPSKISSKLSTGEDEKESNK 120
           ERRHLTRPKLQIVKP  SH          E+PS  +SP+G PSKI SKLS G+ EKE N 
Sbjct: 61  ERRHLTRPKLQIVKPAASHFFKPTSCISSEHPSCTSSPLGTPSKILSKLSIGDGEKELNA 120

Query: 121 VLEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQ 155
           + EEKAIKER FYL PSPRS  GYAQ ELL+LFPLESPK +Q
Sbjct: 121 MEEEKAIKERRFYLHPSPRSMPGYAQPELLTLFPLESPKTSQ 162

[Close]

BLAST of Cp4.1LG10g12290 vs. ExPASy TrEMBL
Match: A0A6J1F404 (LOW QUALITY PROTEIN: VQ motif-containing protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111439876 PE=4 SV=1)

HSP 1 Score: 263 bits (672), Expect = 6.64e-88
Identity = 141/162 (87.04%), Postives = 145/162 (89.51%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKGGSQSRVVCTPLTTFIQT+T TF+EVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE
Sbjct: 1   MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60

Query: 61  RRHLTRPKLQIVKPCPSHSKLGENPSNVTSPVGMPSKISSKLSTGEDEKESNKVLEEKAI 120
           RRHLTRPKLQIVKPCPSH K  E+PS VTSPV  PSKI SKL  GEDEKESNKV EEKAI
Sbjct: 61  RRHLTRPKLQIVKPCPSHFKSDEHPSYVTSPVRTPSKILSKLLMGEDEKESNKVEEEKAI 120

Query: 121 KERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHHETKKN 162
           KERGFYL PS RSK GY Q ELLSLFPLESPKPTQ +ETKKN
Sbjct: 121 KERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQRNETKKN 162

[Close]

BLAST of Cp4.1LG10g12290 vs. ExPASy TrEMBL
Match: A0A0A0KZ05 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G448640 PE=4 SV=1)

HSP 1 Score: 213 bits (541), Expect = 6.77e-68
Identity = 120/166 (72.29%), Postives = 134/166 (80.72%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKG SQS V C PLTTF+QT+T+TF+EVVQRLTGPSE+HT  SK  GS+R TTTSKLHE
Sbjct: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE 60

Query: 61  RRHL-TRPKLQIVKPCPSHSK--LGENPSNVTSPVGMPSKISSKLSTGEDEKES-NKVLE 120
           RR L TRPKLQIVKPCPSH K  +GE+PS +TSP+G PSKI SKLS G++EKE  N + E
Sbjct: 61  RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE 120

Query: 121 EKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHHETKKN 162
           EKAIKER FYL PSPRS   YAQ ELLSLFPLESPK   +HETK N
Sbjct: 121 EKAIKERRFYLHPSPRSMPIYAQPELLSLFPLESPKKVSNHETKIN 166

[Close]

BLAST of Cp4.1LG10g12290 vs. ExPASy TrEMBL
Match: A0A5A7TPA5 (VQ motif-containing protein 31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00210 PE=4 SV=1)

HSP 1 Score: 206 bits (525), Expect = 1.84e-65
Identity = 120/166 (72.29%), Postives = 132/166 (79.52%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKGGSQS V C PLTTF+QT+T+TF+EVVQRLTGPSE+H   SK VGS+R TTTSKLHE
Sbjct: 1   MEKGGSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHMMSSKGVGSRRPTTTSKLHE 60

Query: 61  RRHL-TRPKLQIVKPCPSHSKL--GENPSNVTSPVGMPSKISSKLSTGEDEKES-NKVLE 120
           RRHL TRPKLQIVKPCPS+ K    E+ S +TSPVG PSKI SKLS G++EKE  N   E
Sbjct: 61  RRHLITRPKLQIVKPCPSYFKATTSEHLSYITSPVGTPSKILSKLSIGDEEKEELNNKEE 120

Query: 121 EKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHHETKKN 162
           EKAIKER FYL PSPRS A YAQ ELLSLFPLESPK    +ETK N
Sbjct: 121 EKAIKERRFYLHPSPRSMAVYAQPELLSLFPLESPKNVSKNETKIN 166

[Close]

BLAST of Cp4.1LG10g12290 vs. ExPASy TrEMBL
Match: A0A6J1D5K7 (VQ motif-containing protein 31 OS=Momordica charantia OX=3673 GN=LOC111017822 PE=4 SV=1)

HSP 1 Score: 196 bits (497), Expect = 3.34e-61
Identity = 112/162 (69.14%), Postives = 124/162 (76.54%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGS-KRSTTTSKLH 60
           MEK  +QS V C PLTTF+QT+T TF+EVVQRLTGPSE+HTPPSKA GS KR   TSKLH
Sbjct: 1   MEKAANQSLVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTPPSKAAGSSKRPIATSKLH 60

Query: 61  ERRHLTRPKLQIVKPCPSH------SKLGENPSNVTSPVGMPSKISSKLSTGEDEKESNK 120
           ERRHLTRPKLQIVKP  SH          E+PS  +SP+G PSKI SKLS G+ EKE N 
Sbjct: 61  ERRHLTRPKLQIVKPAASHFFKPTSCISSEHPSCTSSPLGTPSKILSKLSIGDGEKELNA 120

Query: 121 VLEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQ 155
           + EEKAIKER FYL PSPRS  GYAQ ELL+LFPLESPK +Q
Sbjct: 121 MEEEKAIKERRFYLHPSPRSMPGYAQPELLTLFPLESPKTSQ 162

[Close]

BLAST of Cp4.1LG10g12290 vs. ExPASy TrEMBL
Match: A0A6J1HN19 (VQ motif-containing protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111466109 PE=4 SV=1)

HSP 1 Score: 184 bits (468), Expect = 2.21e-56
Identity = 107/171 (62.57%), Postives = 124/171 (72.51%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHT-PPSKAVGSKRSTTTSKLH 60
           MEK G+Q+ V C PLTTF+QT+T  F+EVVQRLTGPSE++T P SKA GSKR T+TSKLH
Sbjct: 25  MEKPGTQTPVKCKPLTTFVQTDTTAFREVVQRLTGPSESYTLPSSKATGSKRPTSTSKLH 84

Query: 61  ERRHLTRPKLQIVKPCPSHSK-------------LGENPSNVTSPVGMPSKISSKLSTGE 120
           ERRHLTRPKLQIVKP  SH K               ++PS +TSPVG P KI SKLS G+
Sbjct: 85  ERRHLTRPKLQIVKPSLSHFKPPSFITSPVGTPPRADHPSFITSPVGTPLKIMSKLSIGD 144

Query: 121 DEKESNKVLEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHH 157
            EKE N + EE+A +E+ FYL PSPRS  G AQ ELLSLFPLESPK T  +
Sbjct: 145 GEKELNSIEEERATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSQN 195

[Close]

BLAST of Cp4.1LG10g12290 vs. TAIR 10
Match: AT5G08480.2 (VQ motif-containing protein )

HSP 1 Score: 136.3 bits (342), Expect = 2.1e-32
Identity = 85/164 (51.83%), Postives = 103/164 (62.80%), Query Frame = 0


Query: 3   KGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETH----TPPSKAVGSK-RSTTTSK 62
           KG       C P+TTF+QT+T TF+E+VQRLTGP+E +    TP +  + +  +   TSK
Sbjct: 4   KGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSK 63

Query: 63  LHERRHLTRPKLQIVKPCPSHSKLGENPSN-------VTSPVGMPSKISSKLSTGEDEKE 122
           LHERR   RPKL+IVKP  S    G  PS+       +TSPVG PS + S LS  E E +
Sbjct: 64  LHERRQCMRPKLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGEPD 123

Query: 123 S---NKVLEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESP 152
           S   N   EEKAIKER FYL PSPRSK GY + ELL+LFPL SP
Sbjct: 124 SCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSP 167

[Close]

BLAST of Cp4.1LG10g12290 vs. TAIR 10
Match: AT5G08480.1 (VQ motif-containing protein )

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-25
Identity = 73/155 (47.10%), Postives = 90/155 (58.06%), Query Frame = 0


Query: 3   KGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETH----TPPSKAVGSK-RSTTTSK 62
           KG       C P+TTF+QT+T TF+E+VQRLTGP+E +    TP +  + +  +   TSK
Sbjct: 4   KGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSK 63

Query: 63  LHERRHLTRPKLQIVKPCPSHSKLGENPSNVTSPVGMPSKISSKLSTGE-DEKESNKVLE 122
           LHERR   RPKL+IVKP                       +S K + GE D   +N   E
Sbjct: 64  LHERRQCMRPKLEIVKP----------------------PLSFKPTEGEPDSCTTNIEEE 123

Query: 123 EKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESP 152
           EKAIKER FYL PSPRSK GY + ELL+LFPL SP
Sbjct: 124 EKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSP 136

[Close]

BLAST of Cp4.1LG10g12290 vs. TAIR 10
Match: AT2G33780.1 (VQ motif-containing protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-10
Identity = 59/173 (34.10%), Postives = 85/173 (49.13%), Query Frame = 0


Query: 16  TTFIQTNTRTFQEVVQRLTG--PSETH-----------TPPSKAVGSKRSTTTSKLHERR 75
           TTFI+T+  +F++VVQ LTG   + TH            PP KAV +K+ +++ +L ERR
Sbjct: 36  TTFIRTDPSSFKQVVQLLTGIPKNPTHQPDPRFPPFHSIPPIKAVTNKKQSSSFRLSERR 95

Query: 76  HLTRPKLQIVKPCPSHS----------------KLGENPSNVTSPVGMPSKISSKLSTGE 135
           +  +  L I    P+HS                 L  +   ++ P   P   S   S   
Sbjct: 96  NSMKHYLNI---NPTHSGPPEILTPTILNFPALDLSPDTPLMSDPFYRPGSFSQSPS--- 155

Query: 136 DEKESNKVLEEKAIKERGFYLRPSPRSKAGYAQRELLSLF---PLESPKPTQH 157
           D K S    +E++IKE+GFYLRPSP +     +  LLSLF   P+ SP P+ H
Sbjct: 156 DSKPSFDDDQERSIKEKGFYLRPSPSTTPRDTEPRLLSLFPMTPIHSPAPSPH 202

[Close]

BLAST of Cp4.1LG10g12290 vs. TAIR 10
Match: AT1G28280.1 (VQ motif-containing protein )

HSP 1 Score: 62.8 bits (151), Expect = 3.0e-10
Identity = 58/181 (32.04%), Postives = 90/181 (49.72%), Query Frame = 0


Query: 16  TTFIQTNTRTFQEVVQRLTG------------PSETH-------------TPPSKAVGSK 75
           TTF+Q +T +F++VVQ LTG            P+ TH              PP KAV +K
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 76  RSTTTS----KLHERRH-LTRPKLQIVKPC--PSHSKLGENPSNVTSP--VGMPSKISSK 135
           + +++S    +L+ERR+ +   K+  + P   P +S        + SP  +  PS + S 
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSP 176

Query: 136 LS---------TGEDEKESNKV-LEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESP 153
           ++         +G   +  N++  EEKA+KERGFYL PSP +     +  LL LFP+ SP
Sbjct: 177 VTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSP 236

[Close]

BLAST of Cp4.1LG10g12290 vs. TAIR 10
Match: AT1G28280.2 (VQ motif-containing protein )

HSP 1 Score: 62.8 bits (151), Expect = 3.0e-10
Identity = 58/181 (32.04%), Postives = 90/181 (49.72%), Query Frame = 0


Query: 16  TTFIQTNTRTFQEVVQRLTG------------PSETH-------------TPPSKAVGSK 75
           TTF+Q +T +F++VVQ LTG            P+ TH              PP KAV +K
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 76  RSTTTS----KLHERRH-LTRPKLQIVKPC--PSHSKLGENPSNVTSP--VGMPSKISSK 135
           + +++S    +L+ERR+ +   K+  + P   P +S        + SP  +  PS + S 
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSP 176

Query: 136 LS---------TGEDEKESNKV-LEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESP 153
           ++         +G   +  N++  EEKA+KERGFYL PSP +     +  LL LFP+ SP
Sbjct: 177 VTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSP 236

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g12290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNP0	3.0e-31	51.83	VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1	[more]
O23660	1.4e-09	34.10	VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1	[more]
Q5M750	4.2e-09	32.04	VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1	[more]
Q9M8L3	3.9e-07	31.95	VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1	[more]
Q9FHZ3	3.1e-04	29.32	VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1	[more]

BLAST of Cp4.1LG10g12290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933110.1	1.37e-87	87.04	LOW QUALITY PROTEIN: VQ motif-containing protein 31-like [Cucurbita moschata]	[more]
XP_031740607.1	1.40e-67	72.29	VQ motif-containing protein 31-like [Cucumis sativus]	[more]
XP_038880928.1	6.00e-67	74.52	VQ motif-containing protein 31 [Benincasa hispida]	[more]
KAA0045202.1	3.80e-65	72.29	VQ motif-containing protein 31 [Cucumis melo var. makuwa] >TYK27349.1 VQ motif-c...	[more]
XP_022149395.1	6.90e-61	69.14	VQ motif-containing protein 31 [Momordica charantia]	[more]

BLAST of Cp4.1LG10g12290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F404	6.64e-88	87.04	LOW QUALITY PROTEIN: VQ motif-containing protein 31-like OS=Cucurbita moschata O...	[more]
A0A0A0KZ05	6.77e-68	72.29	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G448640 PE=4 SV=...	[more]
A0A5A7TPA5	1.84e-65	72.29	VQ motif-containing protein 31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1D5K7	3.34e-61	69.14	VQ motif-containing protein 31 OS=Momordica charantia OX=3673 GN=LOC111017822 PE...	[more]
A0A6J1HN19	2.21e-56	62.57	VQ motif-containing protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111466109 PE=4 ...	[more]

BLAST of Cp4.1LG10g12290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08480.2	2.1e-32	51.83	VQ motif-containing protein	[more]
AT5G08480.1	1.9e-25	47.10	VQ motif-containing protein	[more]
AT2G33780.1	1.0e-10	34.10	VQ motif-containing protein	[more]
AT1G28280.1	3.0e-10	32.04	VQ motif-containing protein	[more]
AT1G28280.2	3.0e-10	32.04	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 16..39 e-value: 2.1E-7 score: 30.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..53
None	No IPR available	PANTHER	PTHR33402:SF22	VQ MOTIF-CONTAINING PROTEIN 31	coord: 1..155
IPR039611	VQ motif-containing protein 4/11/13/19/31/33	PANTHER	PTHR33402	VQ MOTIF-CONTAINING PROTEIN 11-LIKE	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g12290.1	Cp4.1LG10g12290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus