Cp4.1LG10g11750 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG10g11750
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionE3 ubiquitin-protein ligase arkadia-like
LocationCp4.1LG10: 8573238 .. 8573933 (-)
RNA-Seq ExpressionCp4.1LG10g11750
SyntenyCp4.1LG10g11750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTTCGCTGCTTCTACGCCGATTCAGTATCGTCTTTACACCGCCGCCGCCCAATCCGAAACCCATACAGCTTTGGAAGTCCGAATGCGCTCTTTCAACCGTCTGATCTCTGCTTCTTCCTTCCCCGGAGTTCCGCCGCAAATTCTGTTTGAAACCAGACCCATTCCGGTGAACGATGCTCTGTTTCATCTCTCTCTGCGCCAACTCCATGATCCTCTGTTTCACATCCCCCGGTTACTCTCCACACTCGACATCCACGCCGCCGCCAGCGAAGTAATTGGCTGGAAAATCGCGTCTCAGATCGCCCAATTGTCCGGCGGAAACAGAGAGACGAGGTTCCACATCGTGGTGGAGGTGGATTTCATCCAAAACATCTGGATGGGTCAGGTGGCCGGAGTGTACCAGGGGCAGGGAAACGGCGGCGGACTGGTGGAGGAGACTGTTGTGGTGGATGAGTCGCCGGCGAGGAGGAGGCAGAGGAGAGGAGTGGTGGCGCGTGTTGAAGTGGAGGAAGAGAAGGAATTATTGGGAGATTGCTGTATCTGTTTGGATGAGATGAATAAGAAGAGGGAGGTGATAAGAACTCCGTGCGGGCATGTGTATCATGAATCATGCATCTTCCAGTGGCTCAACCTCCATAACTCTTGCCCTCTCTGTAAGAGGCCACTGCCATTGGAGGACAACTCAGCCTGA

mRNA sequence

ATGTCTTTCGCTGCTTCTACGCCGATTCAGTATCGTCTTTACACCGCCGCCGCCCAATCCGAAACCCATACAGCTTTGGAAGTCCGAATGCGCTCTTTCAACCGTCTGATCTCTGCTTCTTCCTTCCCCGGAGTTCCGCCGCAAATTCTGTTTGAAACCAGACCCATTCCGGTGAACGATGCTCTGTTTCATCTCTCTCTGCGCCAACTCCATGATCCTCTGTTTCACATCCCCCGGTTACTCTCCACACTCGACATCCACGCCGCCGCCAGCGAAGTAATTGGCTGGAAAATCGCGTCTCAGATCGCCCAATTGTCCGGCGGAAACAGAGAGACGAGGTTCCACATCGTGGTGGAGGTGGATTTCATCCAAAACATCTGGATGGGTCAGGTGGCCGGAGTGTACCAGGGGCAGGGAAACGGCGGCGGACTGGTGGAGGAGACTGTTGTGGTGGATGAGTCGCCGGCGAGGAGGAGGCAGAGGAGAGGAGTGGTGGCGCGTGTTGAAGTGGAGGAAGAGAAGGAATTATTGGGAGATTGCTGTATCTGTTTGGATGAGATGAATAAGAAGAGGGAGGTGATAAGAACTCCGTGCGGGCATGTGTATCATGAATCATGCATCTTCCAGTGGCTCAACCTCCATAACTCTTGCCCTCTCTGTAAGAGGCCACTGCCATTGGAGGACAACTCAGCCTGA

Coding sequence (CDS)

ATGTCTTTCGCTGCTTCTACGCCGATTCAGTATCGTCTTTACACCGCCGCCGCCCAATCCGAAACCCATACAGCTTTGGAAGTCCGAATGCGCTCTTTCAACCGTCTGATCTCTGCTTCTTCCTTCCCCGGAGTTCCGCCGCAAATTCTGTTTGAAACCAGACCCATTCCGGTGAACGATGCTCTGTTTCATCTCTCTCTGCGCCAACTCCATGATCCTCTGTTTCACATCCCCCGGTTACTCTCCACACTCGACATCCACGCCGCCGCCAGCGAAGTAATTGGCTGGAAAATCGCGTCTCAGATCGCCCAATTGTCCGGCGGAAACAGAGAGACGAGGTTCCACATCGTGGTGGAGGTGGATTTCATCCAAAACATCTGGATGGGTCAGGTGGCCGGAGTGTACCAGGGGCAGGGAAACGGCGGCGGACTGGTGGAGGAGACTGTTGTGGTGGATGAGTCGCCGGCGAGGAGGAGGCAGAGGAGAGGAGTGGTGGCGCGTGTTGAAGTGGAGGAAGAGAAGGAATTATTGGGAGATTGCTGTATCTGTTTGGATGAGATGAATAAGAAGAGGGAGGTGATAAGAACTCCGTGCGGGCATGTGTATCATGAATCATGCATCTTCCAGTGGCTCAACCTCCATAACTCTTGCCCTCTCTGTAAGAGGCCACTGCCATTGGAGGACAACTCAGCCTGA

Protein sequence

MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVNDALFHLSLRQLHDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIVVEVDFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVVARVEVEEEKELLGDCCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDNSA
Homology
BLAST of Cp4.1LG10g11750 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.7e-11
Identity = 24/55 (43.64%), Postives = 35/55 (63.64%), Query Frame = 0

Query: 174 KELLGDCCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLED 229
           K  +  C +C+DE     +V + PC HV+H+ C+  WL LHNSCP+C+  LP +D
Sbjct: 210 KSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDD 264

BLAST of Cp4.1LG10g11750 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.3e-11
Identity = 22/49 (44.90%), Postives = 33/49 (67.35%), Query Frame = 0

Query: 180 CCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLED 229
           C +C+D+  +  E  + PC H+YH+ C+  WL LHNSCP+C+  LP +D
Sbjct: 224 CAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDD 272

BLAST of Cp4.1LG10g11750 vs. ExPASy Swiss-Prot
Match: Q9VHI7 (E3 ubiquitin-protein ligase Iruka OS=Drosophila melanogaster OX=7227 GN=Iru PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.4e-10
Identity = 30/78 (38.46%), Postives = 43/78 (55.13%), Query Frame = 0

Query: 155 PARRRQRRGVVARVEVE-EEKELLGDCCICLDEMNKKREVIRTPCGHVYHESCIFQWLNL 214
           P    QR   +  V++  EE      C IC D+      V + PC H+YHE+CI  WLNL
Sbjct: 227 PPLSAQRINEIPNVQINAEEVNRKIQCSICWDDFKIDETVRKLPCSHLYHENCIVPWLNL 286

Query: 215 HNSCPLCKRPLPLEDNSA 232
           H++CP+C++ L  + N A
Sbjct: 287 HSTCPICRKSLADDGNDA 304

BLAST of Cp4.1LG10g11750 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.1e-10
Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 0

Query: 180 CCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDNSA 232
           C +C DE   K E  + PC H+YH  CI  WL  HNSCP+C++ LP   +S+
Sbjct: 186 CPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRGSSS 237

BLAST of Cp4.1LG10g11750 vs. ExPASy Swiss-Prot
Match: Q6AXU4 (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.2e-10
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 0

Query: 180 CCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDNS 231
           C +CL E  ++  VI  PC H++H +CI  WL+  NSCPLC+  LP +D+S
Sbjct: 88  CPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDDS 138

BLAST of Cp4.1LG10g11750 vs. NCBI nr
Match: KAG6603243.1 (E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 432 bits (1111), Expect = 3.08e-152
Identity = 216/232 (93.10%), Postives = 222/232 (95.69%), Query Frame = 0

Query: 1   MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVND 60
           MSFAASTPIQYRLYTAAAQSETH ALEVRMRSFNRLISASSFPGVPPQILFETRP PVND
Sbjct: 1   MSFAASTPIQYRLYTAAAQSETHKALEVRMRSFNRLISASSFPGVPPQILFETRPTPVND 60

Query: 61  ALFHLSLRQLHDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIVVEV 120
           ALFHLSLRQLHDPLFHIPRLLSTL IHAAA EVIGWKIASQIAQLS GNRET FHIVVEV
Sbjct: 61  ALFHLSLRQLHDPLFHIPRLLSTLHIHAAACEVIGWKIASQIAQLSAGNRETSFHIVVEV 120

Query: 121 DFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVVARVEVEEEKELLGDC 180
           DFIQNIWMGQVAG++QGQGNGGGLVEET+V+DE PARRRQRRGVVARVEVEEEKEL GDC
Sbjct: 121 DFIQNIWMGQVAGMHQGQGNGGGLVEETLVLDELPARRRQRRGVVARVEVEEEKEL-GDC 180

Query: 181 CICLDEM-NKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDNSA 231
           CICLDEM NKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLE++S 
Sbjct: 181 CICLDEMMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST 231

BLAST of Cp4.1LG10g11750 vs. NCBI nr
Match: KAG6603237.1 (E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 430 bits (1106), Expect = 1.78e-151
Identity = 215/232 (92.67%), Postives = 221/232 (95.26%), Query Frame = 0

Query: 1   MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVND 60
           MSFAASTPIQYRLYTAAAQSETH ALEVRMRSFNRLISASSF GVPPQILFETRP PVND
Sbjct: 1   MSFAASTPIQYRLYTAAAQSETHKALEVRMRSFNRLISASSFTGVPPQILFETRPTPVND 60

Query: 61  ALFHLSLRQLHDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIVVEV 120
           ALFHLSLRQLHDPLFHIPRLLSTLDIHAAA EVIGWKIASQI QLS GNRET FHIVVEV
Sbjct: 61  ALFHLSLRQLHDPLFHIPRLLSTLDIHAAACEVIGWKIASQITQLSAGNRETSFHIVVEV 120

Query: 121 DFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVVARVEVEEEKELLGDC 180
           DFIQNIWMGQVAG++QGQGNGGGLVEET+V+DE PARRRQRRGVVARVEVEEEKEL GDC
Sbjct: 121 DFIQNIWMGQVAGMHQGQGNGGGLVEETLVLDELPARRRQRRGVVARVEVEEEKEL-GDC 180

Query: 181 CICLDEM-NKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDNSA 231
           CICLDEM NKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLE++S 
Sbjct: 181 CICLDEMMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST 231

BLAST of Cp4.1LG10g11750 vs. NCBI nr
Match: XP_022928677.1 (E3 ubiquitin-protein ligase arkadia-like [Cucurbita moschata])

HSP 1 Score: 383 bits (983), Expect = 3.52e-133
Identity = 190/203 (93.60%), Postives = 194/203 (95.57%), Query Frame = 0

Query: 30  MRSFNRLISASSFPGVPPQILFETRPIPVNDALFHLSLRQLHDPLFHIPRLLSTLDIHAA 89
           MRSFNRLISASSFPGVPPQILFETRP PVNDALFHLSLRQLHDPLFHIPRLLSTLDIHAA
Sbjct: 1   MRSFNRLISASSFPGVPPQILFETRPTPVNDALFHLSLRQLHDPLFHIPRLLSTLDIHAA 60

Query: 90  ASEVIGWKIASQIAQLSGGNRETRFHIVVEVDFIQNIWMGQVAGVYQGQGNGGGLVEETV 149
           A EVIGWKIASQIAQLS GNRET FHIVVEVDFIQNIWMGQVAG+ QGQGNGGGLVEETV
Sbjct: 61  ACEVIGWKIASQIAQLSAGNRETSFHIVVEVDFIQNIWMGQVAGMRQGQGNGGGLVEETV 120

Query: 150 VVDESPARRRQRRGVVARVEVEEEKELLGDCCICLDEM-NKKREVIRTPCGHVYHESCIF 209
           V+DE PARRRQRRGVVARVEVEEEKEL GDCCICLDEM NKKREVIRTPCGHVYHESCIF
Sbjct: 121 VLDELPARRRQRRGVVARVEVEEEKEL-GDCCICLDEMMNKKREVIRTPCGHVYHESCIF 180

Query: 210 QWLNLHNSCPLCKRPLPLEDNSA 231
           QWLNLHNSCPLCKRPLPLE++S 
Sbjct: 181 QWLNLHNSCPLCKRPLPLEEDST 202

BLAST of Cp4.1LG10g11750 vs. NCBI nr
Match: XP_038883574.1 (E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida])

HSP 1 Score: 221 bits (562), Expect = 8.88e-69
Identity = 122/232 (52.59%), Postives = 158/232 (68.10%), Query Frame = 0

Query: 1   MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVND 60
           MS AASTPIQYRLY        +  LEV+   F R+IS S   G PP+IL ET  IP ++
Sbjct: 1   MSSAASTPIQYRLY-GTGSGTGNGVLEVQTSYFERMISVSPVTGRPPRILHETPRIPFHN 60

Query: 61  ALFHLSLRQLHDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIVVEV 120
           ALF+LSL QL +PLF+I + LS+L+I  AA E++  +IAS I ++   NRE+ F I+ EV
Sbjct: 61  ALFYLSLHQLQNPLFYISQFLSSLNICPAACEIMARQIASYIDRMINENRESNFRIIAEV 120

Query: 121 DFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGV-VARVEVEEEKELLGD 180
           DF + IWM +   +Y G      + EETVV DE+P  RR    V V RV   + +E LGD
Sbjct: 121 DFSRVIWMEE-HSIYGGDA----MAEETVVFDEAPPPRRGVEKVAVERVRELKSQEELGD 180

Query: 181 CCICLDEMN-KKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDNS 230
           CCICL+E++ +KREVIR PCGHVYHESC+F+WL  +NSCPLC++PLPL D+S
Sbjct: 181 CCICLEELSCEKREVIRIPCGHVYHESCVFKWLRKNNSCPLCRKPLPLNDDS 226

BLAST of Cp4.1LG10g11750 vs. NCBI nr
Match: XP_011659694.1 (E3 ubiquitin-protein ligase RDUF1 [Cucumis sativus] >KGN43356.1 hypothetical protein Csa_020163 [Cucumis sativus])

HSP 1 Score: 215 bits (548), Expect = 1.29e-66
Identity = 117/232 (50.43%), Postives = 158/232 (68.10%), Query Frame = 0

Query: 1   MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVND 60
           MSFA S PIQYRLY  A+ +  +  L+V +    ++IS S   G P ++L +T  IP ++
Sbjct: 1   MSFAISNPIQYRLY--ASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHN 60

Query: 61  ALFHLSLRQLHDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIVVEV 120
           ALF+LSLRQL  PLF+I ++LS+L+I  AAS+ +  +IAS I Q+   N ET FHI+ EV
Sbjct: 61  ALFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEV 120

Query: 121 DFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVVA--RVEVEEEKELLG 180
           DFI+ IW+  + G       GG   EETVV+DE+P   ++  GV    R+  EE+ E LG
Sbjct: 121 DFIRLIWLPSMGG-------GGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELG 180

Query: 181 DCCICLDEMN-KKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDN 229
           DC ICLDE++ +KREV+R PCGHVYHESCIF+WL  HNSCPLC++PL  +D+
Sbjct: 181 DCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDD 223

BLAST of Cp4.1LG10g11750 vs. ExPASy TrEMBL
Match: A0A6J1EKL4 (E3 ubiquitin-protein ligase arkadia-like OS=Cucurbita moschata OX=3662 GN=LOC111435522 PE=4 SV=1)

HSP 1 Score: 383 bits (983), Expect = 1.70e-133
Identity = 190/203 (93.60%), Postives = 194/203 (95.57%), Query Frame = 0

Query: 30  MRSFNRLISASSFPGVPPQILFETRPIPVNDALFHLSLRQLHDPLFHIPRLLSTLDIHAA 89
           MRSFNRLISASSFPGVPPQILFETRP PVNDALFHLSLRQLHDPLFHIPRLLSTLDIHAA
Sbjct: 1   MRSFNRLISASSFPGVPPQILFETRPTPVNDALFHLSLRQLHDPLFHIPRLLSTLDIHAA 60

Query: 90  ASEVIGWKIASQIAQLSGGNRETRFHIVVEVDFIQNIWMGQVAGVYQGQGNGGGLVEETV 149
           A EVIGWKIASQIAQLS GNRET FHIVVEVDFIQNIWMGQVAG+ QGQGNGGGLVEETV
Sbjct: 61  ACEVIGWKIASQIAQLSAGNRETSFHIVVEVDFIQNIWMGQVAGMRQGQGNGGGLVEETV 120

Query: 150 VVDESPARRRQRRGVVARVEVEEEKELLGDCCICLDEM-NKKREVIRTPCGHVYHESCIF 209
           V+DE PARRRQRRGVVARVEVEEEKEL GDCCICLDEM NKKREVIRTPCGHVYHESCIF
Sbjct: 121 VLDELPARRRQRRGVVARVEVEEEKEL-GDCCICLDEMMNKKREVIRTPCGHVYHESCIF 180

Query: 210 QWLNLHNSCPLCKRPLPLEDNSA 231
           QWLNLHNSCPLCKRPLPLE++S 
Sbjct: 181 QWLNLHNSCPLCKRPLPLEEDST 202

BLAST of Cp4.1LG10g11750 vs. ExPASy TrEMBL
Match: A0A0A0K696 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 215 bits (548), Expect = 6.25e-67
Identity = 117/232 (50.43%), Postives = 158/232 (68.10%), Query Frame = 0

Query: 1   MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVND 60
           MSFA S PIQYRLY  A+ +  +  L+V +    ++IS S   G P ++L +T  IP ++
Sbjct: 1   MSFAISNPIQYRLY--ASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHN 60

Query: 61  ALFHLSLRQLHDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIVVEV 120
           ALF+LSLRQL  PLF+I ++LS+L+I  AAS+ +  +IAS I Q+   N ET FHI+ EV
Sbjct: 61  ALFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEV 120

Query: 121 DFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVVA--RVEVEEEKELLG 180
           DFI+ IW+  + G       GG   EETVV+DE+P   ++  GV    R+  EE+ E LG
Sbjct: 121 DFIRLIWLPSMGG-------GGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELG 180

Query: 181 DCCICLDEMN-KKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDN 229
           DC ICLDE++ +KREV+R PCGHVYHESCIF+WL  HNSCPLC++PL  +D+
Sbjct: 181 DCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDD 223

BLAST of Cp4.1LG10g11750 vs. ExPASy TrEMBL
Match: A0A0A0K2W2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 215 bits (547), Expect = 8.86e-67
Identity = 117/231 (50.65%), Postives = 157/231 (67.97%), Query Frame = 0

Query: 1   MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVND 60
           MSFA S PIQYRLY  A+ +  +  L+V +    ++IS S   G P ++L +T  IP ++
Sbjct: 1   MSFAISNPIQYRLY--ASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHN 60

Query: 61  ALFHLSLRQLHDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIVVEV 120
           ALF+LSLRQL  PLF+I ++LS+L+I  AAS+ +  +IAS I Q+   N ET FHI+ EV
Sbjct: 61  ALFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEV 120

Query: 121 DFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVVA--RVEVEEEKELLG 180
           DFI+ IW+  + G       GG   EETVV+DE+P   ++  GV    R+  EE+ E LG
Sbjct: 121 DFIRLIWLPSMGG-------GGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELG 180

Query: 181 DCCICLDEMN-KKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLED 228
           DC ICLDE++ +KREV+R PCGHVYHESCIF+WL  HNSCPLC++PL  +D
Sbjct: 181 DCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDD 222

BLAST of Cp4.1LG10g11750 vs. ExPASy TrEMBL
Match: A0A5D3E1S5 (E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00800 PE=4 SV=1)

HSP 1 Score: 209 bits (533), Expect = 1.17e-64
Identity = 118/232 (50.86%), Postives = 156/232 (67.24%), Query Frame = 0

Query: 1   MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVND 60
           MSFA S PIQYRLY +      +  LEVR+  F ++IS S   G P QIL +T  IP ++
Sbjct: 1   MSFAISNPIQYRLYGSGTGG--NGILEVRISFFEQMISLSPVTGRPHQILHQTPRIPYHN 60

Query: 61  ALFHLSLRQLHDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIVVEV 120
           AL +L+LRQL  PLF+I + LS+L+I  AAS+ +  +IAS I Q+   N +  FHI+ EV
Sbjct: 61  ALVYLTLRQLQSPLFYITQFLSSLNIRPAASQSMARQIASHILQMPDRNGDRNFHIIAEV 120

Query: 121 DFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVVA--RVEVEEEKELLG 180
           DFI+ IW+       + Q  G G  EETVV DE+P   ++  G     R++ EE+ E LG
Sbjct: 121 DFIRVIWLE-----LEEQSMGAGA-EETVVFDEAPPALKRGVGKARGERLKSEEKVEDLG 180

Query: 181 DCCICLDEMN-KKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDN 229
           DC ICLDE++ +KREVIR PCGHVYHESCIF+WL  HNSCPLC++PLPL+++
Sbjct: 181 DCSICLDELSCEKREVIRIPCGHVYHESCIFKWLKNHNSCPLCRKPLPLKED 224

BLAST of Cp4.1LG10g11750 vs. ExPASy TrEMBL
Match: A0A1S4DUZ4 (E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 PE=4 SV=1)

HSP 1 Score: 209 bits (533), Expect = 1.17e-64
Identity = 118/232 (50.86%), Postives = 156/232 (67.24%), Query Frame = 0

Query: 1   MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVND 60
           MSFA S PIQYRLY +      +  LEVR+  F ++IS S   G P QIL +T  IP ++
Sbjct: 1   MSFAISNPIQYRLYGSGTGG--NGILEVRISFFEQMISLSPVTGRPHQILHQTPRIPYHN 60

Query: 61  ALFHLSLRQLHDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIVVEV 120
           AL +L+LRQL  PLF+I + LS+L+I  AAS+ +  +IAS I Q+   N +  FHI+ EV
Sbjct: 61  ALVYLTLRQLQSPLFYITQFLSSLNIRPAASQSMARQIASHILQMPDRNGDRNFHIIAEV 120

Query: 121 DFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVVA--RVEVEEEKELLG 180
           DFI+ IW+       + Q  G G  EETVV DE+P   ++  G     R++ EE+ E LG
Sbjct: 121 DFIRVIWLE-----LEEQSMGAGA-EETVVFDEAPPALKRGVGKARGERLKSEEKVEDLG 180

Query: 181 DCCICLDEMN-KKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDN 229
           DC ICLDE++ +KREVIR PCGHVYHESCIF+WL  HNSCPLC++PLPL+++
Sbjct: 181 DCSICLDELSCEKREVIRIPCGHVYHESCIFKWLKNHNSCPLCRKPLPLKED 224

BLAST of Cp4.1LG10g11750 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 2.7e-12
Identity = 24/55 (43.64%), Postives = 35/55 (63.64%), Query Frame = 0

Query: 174 KELLGDCCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLED 229
           K  +  C +C+DE     +V + PC HV+H+ C+  WL LHNSCP+C+  LP +D
Sbjct: 210 KSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDD 264

BLAST of Cp4.1LG10g11750 vs. TAIR 10
Match: AT5G15820.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.9e-11
Identity = 37/113 (32.74%), Postives = 53/113 (46.90%), Query Frame = 0

Query: 120 VDFIQNIWMGQVAGVYQGQGN---GGGLVEETVVVDESPARRRQRRGVV-ARVEVEEEKE 179
           +D    +W+  V G      N   G     ET +    PA +    G+    + +EE   
Sbjct: 227 MDLDVEVWLDSVDGYAPMDYNAIIGQMFDNETGIKGTPPASKSVVDGLPDVELTIEELSS 286

Query: 180 LLGDCCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLED 229
           +   C IC DE+  K +V R PC H YH  CI  WL + N+CP+C+  LP +D
Sbjct: 287 VSIVCAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNTCPVCRHELPTDD 339

BLAST of Cp4.1LG10g11750 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 3.8e-11
Identity = 23/55 (41.82%), Postives = 34/55 (61.82%), Query Frame = 0

Query: 177 LGDCCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDNSA 232
           +  C +C++E     +    PC H+YH+ CI  WL L+NSCP+C+R LPL +  A
Sbjct: 221 MSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDLPLVNTVA 275

BLAST of Cp4.1LG10g11750 vs. TAIR 10
Match: AT3G02340.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 3.8e-11
Identity = 31/84 (36.90%), Postives = 46/84 (54.76%), Query Frame = 0

Query: 146 EETVVVDESPARRRQRRGV-VARVEVEEEKELLGDCCICLDEMNKKREVIRTPCGHVYHE 205
           +ET +    PA +   + + V  + VEE  +    C +C DEM  + +V R PC H YH 
Sbjct: 300 DETGIRGNPPAAKSVIQDLPVVELAVEELDKGNNVCAVCKDEMLVEEKVRRLPCSHFYHG 359

Query: 206 SCIFQWLNLHNSCPLCKRPLPLED 229
            CI  WL + N+CP+C+  LP +D
Sbjct: 360 ECIIPWLGIRNTCPVCRYELPTDD 383

BLAST of Cp4.1LG10g11750 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.0e-11
Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 0

Query: 180 CCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDNSA 232
           C +C DE   K E  + PC H+YH  CI  WL  HNSCP+C++ LP   +S+
Sbjct: 186 CPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRGSSS 237

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8LPN73.7e-1143.64E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19... [more]
P0CH308.3e-1144.90E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV... [more]
Q9VHI72.4e-1038.46E3 ubiquitin-protein ligase Iruka OS=Drosophila melanogaster OX=7227 GN=Iru PE=1... [more]
Q94AK47.1e-1046.15E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV... [more]
Q6AXU49.2e-1047.06E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 ... [more]
Match NameE-valueIdentityDescription
KAG6603243.13.08e-15293.10E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma ... [more]
KAG6603237.11.78e-15192.67E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma ... [more]
XP_022928677.13.52e-13393.60E3 ubiquitin-protein ligase arkadia-like [Cucurbita moschata][more]
XP_038883574.18.88e-6952.59E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida][more]
XP_011659694.11.29e-6650.43E3 ubiquitin-protein ligase RDUF1 [Cucumis sativus] >KGN43356.1 hypothetical pro... [more]
Match NameE-valueIdentityDescription
A0A6J1EKL41.70e-13393.60E3 ubiquitin-protein ligase arkadia-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A0A0K6966.25e-6750.43RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 P... [more]
A0A0A0K2W28.86e-6750.65RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 P... [more]
A0A5D3E1S51.17e-6450.86E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A1S4DUZ41.17e-6450.86E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 ... [more]
Match NameE-valueIdentityDescription
AT3G19950.12.7e-1243.64RING/U-box superfamily protein [more]
AT5G15820.12.9e-1132.74RING/U-box superfamily protein [more]
AT1G60360.13.8e-1141.82RING/U-box superfamily protein [more]
AT3G02340.13.8e-1136.90RING/U-box superfamily protein [more]
AT3G56580.25.0e-1146.15RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 180..220
e-value: 3.4E-8
score: 43.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 179..221
e-value: 5.7E-14
score: 52.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 180..221
score: 13.094151
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 165..231
e-value: 1.3E-19
score: 71.1
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 8..221
NoneNo IPR availablePANTHERPTHR22765:SF329SUBFAMILY NOT NAMEDcoord: 8..221
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 168..226

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g11750.1Cp4.1LG10g11750.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044267 cellular protein metabolic process