Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGAGAGAGAGAGGAGAGAGAACAAAATTCAAATATTTGGAAAGCACCCGCCAGAAATTCGTTATTGAGAATCAATGGCAGAGTTCCCTTGCGCTCTAGAACGCACCGTCGCTTCTGCTCTGCTCCTTCTCTCCACTTCACCGCCTCCTCCGCCATCTCCTCCGCCGTCGCCATCTTTGTAAGATATTGGATAGTATTCCATTTCCTGTTTTCTCTGTCATTTGCTCTGTTCTGTTGAATGATTGTATCTGATCGTCCTTTTTTTTCTTCTTGCTTTAAATCTCTGTTTCTGTGTTTGGTTGCTCTGTAGACCGATTTCTCAAGACGAATGGTTGTTTGAGGAGAAAATTCTTGGTGGAAAATGCTCGAGTGAGATGTCGCCATTTTGTGATGATTCGAAGTCTTGCTCTTCAGTACTCACTAGATCAGATGAATCGTCCGAGACTCGAGCGCAGGAGCTGTTGCTGTTCTCTACTTCAGCTTATCGCGACGAGCTAAAGCTTAATGTAATGGTTCTCAGTCTAACCTGTTTTGCATAATTTCGTTCTTCTTGTATGTTGTTTTGTTCGATGTGGTATTTTTGGCTCTTTTTGTTTGCGCAGTTTCTGCTGTGTGTGAATCCCGTGCCTTGGTTTGAGTAAAAGAGCTATTGATTTTGGTCGTCGTTTCTGCTTTTGTAACTTGAATTAGTTTCTGGATAAGTTTACTTCAATCGGATTCTGTCACTGAAACTGGAAAATCTACTGCTGGTAGCGGAATTTAGTTTGTGTTCATTAGTACTTGGCTTATTATTTTCAAAGATGTTTGACTATCGGATCCTTCTTGTTGTTTCTTCTTCGGTATGAACTTAAATCTGATCAGAATGTTAGAAATTCTACTTCCTCCTCCTGATTACTTACCTATCAGTCATTGAATTTCAATATCTCAATACTTCGATCGATAAGCGTTTAGTTGCCAATTAGTAAATACTTCGTTGATTTTGAGTTTATCACTCTTTCAAGTCTAACGAATTCCACACAGGTCGTGAGAAAGAGTCGTTCGAGGCCAGTACGGATATCCGGGAACCGGAATCTCACTCCTACAGACGACGTGACCCTGTCTTCAGGCTCCGCGTCCTCGGAGACGACTTATTGTTTGTCAAGCAGCTCAAGTGTGGACACAAGCGCGCCAATCCGTCGCCTGGTTACCAGAGCAGAGAAGAAGTTGGAAATGATTCGTCACGCGTGGAGGAAAAAGCACGTCGCATCCGCTCATATGCGCCGGCGTGCCGAAGCGATTCTGAGTTACCTCTCTGGTGGCTGTTCCTCTGAGGTGAAGATACGCCAAGTGCTCGGTGACAGCCCTGACACAAGCAAGGCTCTCAGAATGTAATTCATCCTTCTCTCTCCCACCTCCTCACCACGTTGGCTCTAAAGTCATGCTTTTATCCAGTGCTTCCAATTCACACATTTACTGTACACGGTAGGATCATCTATGCCCTCGGAATACTCTCACCTCTGATGATAATTTATATAGTCACCATTGGAATACCATTCATTAGGCGAAAGATTCAAAGATAGCCAATATGGAGATCTATATTTTCAAGCTTACAGATTGATTAGGATCAAAATTGATTTGGTTTCTGTTTCGCCTTCTTTGACAGGCTGCTGAAACTGGAAGAGATCAAAAGATCAGGAACAGGTGGACGCCAAGATCCCTATATTTACACGGTACAAGACACACTCAACTCCCAATTTCCTATCTATTTGATGGCTTCAAAGCAATCAAATCCAATAAAACCCTTTAGTTTACACAGATATACTTGCCAAAATTTTCCGGGAAAATTGAACATGTTTCTTTACTTTCCATTTCCCTTTTGCAGATTGCTTGACAAACTCTGAGTAGATGATCCGTTCATTTATAGCCTGGTCCAAACTCAGCCATAGAGAGTCTCGGGACAATCCCAATTGATTGGGAAGTTTTGATTAGGCCTGCTTTGTAAGCAAATTAAATATGGTAGGGTAGTACAGGATATACTAGAATTGATTAGAGCTTCATACGGAACATAGAGCTTTGAAGTATCATCTTAGCTTCTCCATTTTTGAATCTCCCCAGAATAATGCCTTTTAGGGGGAGTGAATTCAGTTCTGTGACATAGCTATAATCTTGTATGATAAGC
mRNA sequence
TGAGAGAGAGAGAGGAGAGAGAACAAAATTCAAATATTTGGAAAGCACCCGCCAGAAATTCGTTATTGAGAATCAATGGCAGAGTTCCCTTGCGCTCTAGAACGCACCGTCGCTTCTGCTCTGCTCCTTCTCTCCACTTCACCGCCTCCTCCGCCATCTCCTCCGCCGTCGCCATCTTTACCGATTTCTCAAGACGAATGGTTGTTTGAGGAGAAAATTCTTGGTGGAAAATGCTCGAGTGAGATGTCGCCATTTTGTGATGATTCGAAGTCTTGCTCTTCAGTACTCACTAGATCAGATGAATCGTCCGAGACTCGAGCGCAGGAGCTGTTGCTGTTCTCTACTTCAGCTTATCGCGACGAGCTAAAGCTTAATGTCGTGAGAAAGAGTCGTTCGAGGCCAGTACGGATATCCGGGAACCGGAATCTCACTCCTACAGACGACGTGACCCTGTCTTCAGGCTCCGCGTCCTCGGAGACGACTTATTGTTTGTCAAGCAGCTCAAGTGTGGACACAAGCGCGCCAATCCGTCGCCTGGTTACCAGAGCAGAGAAGAAGTTGGAAATGATTCGTCACGCGTGGAGGAAAAAGCACGTCGCATCCGCTCATATGCGCCGGCGTGCCGAAGCGATTCTGAGTTACCTCTCTGGTGGCTGTTCCTCTGAGGTGAAGATACGCCAAGTGCTCGGTGACAGCCCTGACACAAGCAAGGCTCTCAGAATGCTGCTGAAACTGGAAGAGATCAAAAGATCAGGAACAGGTGGACGCCAAGATCCCTATATTTACACGATTGCTTGACAAACTCTGAGTAGATGATCCGTTCATTTATAGCCTGGTCCAAACTCAGCCATAGAGAGTCTCGGGACAATCCCAATTGATTGGGAAGTTTTGATTAGGCCTGCTTTGTAAGCAAATTAAATATGGTAGGGTAGTACAGGATATACTAGAATTGATTAGAGCTTCATACGGAACATAGAGCTTTGAAGTATCATCTTAGCTTCTCCATTTTTGAATCTCCCCAGAATAATGCCTTTTAGGGGGAGTGAATTCAGTTCTGTGACATAGCTATAATCTTGTATGATAAGC
Coding sequence (CDS)
ATGGCAGAGTTCCCTTGCGCTCTAGAACGCACCGTCGCTTCTGCTCTGCTCCTTCTCTCCACTTCACCGCCTCCTCCGCCATCTCCTCCGCCGTCGCCATCTTTACCGATTTCTCAAGACGAATGGTTGTTTGAGGAGAAAATTCTTGGTGGAAAATGCTCGAGTGAGATGTCGCCATTTTGTGATGATTCGAAGTCTTGCTCTTCAGTACTCACTAGATCAGATGAATCGTCCGAGACTCGAGCGCAGGAGCTGTTGCTGTTCTCTACTTCAGCTTATCGCGACGAGCTAAAGCTTAATGTCGTGAGAAAGAGTCGTTCGAGGCCAGTACGGATATCCGGGAACCGGAATCTCACTCCTACAGACGACGTGACCCTGTCTTCAGGCTCCGCGTCCTCGGAGACGACTTATTGTTTGTCAAGCAGCTCAAGTGTGGACACAAGCGCGCCAATCCGTCGCCTGGTTACCAGAGCAGAGAAGAAGTTGGAAATGATTCGTCACGCGTGGAGGAAAAAGCACGTCGCATCCGCTCATATGCGCCGGCGTGCCGAAGCGATTCTGAGTTACCTCTCTGGTGGCTGTTCCTCTGAGGTGAAGATACGCCAAGTGCTCGGTGACAGCCCTGACACAAGCAAGGCTCTCAGAATGCTGCTGAAACTGGAAGAGATCAAAAGATCAGGAACAGGTGGACGCCAAGATCCCTATATTTACACGATTGCTTGA
Protein sequence
MAEFPCALERTVASALLLLSTSPPPPPSPPPSPSLPISQDEWLFEEKILGGKCSSEMSPFCDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTPTDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMRRRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA
Homology
BLAST of Cp4.1LG10g11540 vs. NCBI nr
Match:
XP_023544086.1 (uncharacterized protein LOC111803781 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 453 bits (1166), Expect = 2.53e-160
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
Query: 1 MAEFPCALERTVASALLLLSTSPPPPPSPPPSPSLPISQDEWLFEEKILGGKCSSEMSPF 60
MAEFPCALERTVASALLLLSTSPPPPPSPPPSPSLPISQDEWLFEEKILGGKCSSEMSPF
Sbjct: 1 MAEFPCALERTVASALLLLSTSPPPPPSPPPSPSLPISQDEWLFEEKILGGKCSSEMSPF 60
Query: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP
Sbjct: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
Query: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR
Sbjct: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
Query: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA 240
RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA
Sbjct: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA 240
BLAST of Cp4.1LG10g11540 vs. NCBI nr
Match:
XP_022967938.1 (uncharacterized protein LOC111467304 [Cucurbita maxima])
HSP 1 Score: 449 bits (1156), Expect = 8.48e-159
Identity = 238/240 (99.17%), Postives = 239/240 (99.58%), Query Frame = 0
Query: 1 MAEFPCALERTVASALLLLSTSPPPPPSPPPSPSLPISQDEWLFEEKILGGKCSSEMSPF 60
MAEFPCALERTVASALLLLSTSPPPP SPPPSPS+PISQDEWLFEEKILGGKCSSEMSPF
Sbjct: 1 MAEFPCALERTVASALLLLSTSPPPPSSPPPSPSIPISQDEWLFEEKILGGKCSSEMSPF 60
Query: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP
Sbjct: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
Query: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR
Sbjct: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
Query: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA 240
RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA
Sbjct: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA 240
BLAST of Cp4.1LG10g11540 vs. NCBI nr
Match:
XP_022928741.1 (uncharacterized protein LOC111435559 [Cucurbita moschata])
HSP 1 Score: 449 bits (1156), Expect = 8.48e-159
Identity = 238/240 (99.17%), Postives = 239/240 (99.58%), Query Frame = 0
Query: 1 MAEFPCALERTVASALLLLSTSPPPPPSPPPSPSLPISQDEWLFEEKILGGKCSSEMSPF 60
MAEFPCALERTVASALLLLSTSPPPPPSP PSPS+PISQDEWLFEEKILGGKCSSEMSPF
Sbjct: 1 MAEFPCALERTVASALLLLSTSPPPPPSPQPSPSIPISQDEWLFEEKILGGKCSSEMSPF 60
Query: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP
Sbjct: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
Query: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR
Sbjct: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
Query: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA 240
RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA
Sbjct: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA 240
BLAST of Cp4.1LG10g11540 vs. NCBI nr
Match:
KAG7033525.1 (hypothetical protein SDJN02_03247, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 449 bits (1154), Expect = 1.71e-158
Identity = 238/240 (99.17%), Postives = 239/240 (99.58%), Query Frame = 0
Query: 1 MAEFPCALERTVASALLLLSTSPPPPPSPPPSPSLPISQDEWLFEEKILGGKCSSEMSPF 60
MAEFPCALERTVASALLLLSTS PPPPSPPPSPS+PISQDEWLFEEKILGGKCSSEMSPF
Sbjct: 1 MAEFPCALERTVASALLLLSTSLPPPPSPPPSPSIPISQDEWLFEEKILGGKCSSEMSPF 60
Query: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP
Sbjct: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
Query: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR
Sbjct: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
Query: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA 240
RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA
Sbjct: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA 240
BLAST of Cp4.1LG10g11540 vs. NCBI nr
Match:
KAG6603217.1 (hypothetical protein SDJN03_03826, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 401 bits (1031), Expect = 4.02e-140
Identity = 214/216 (99.07%), Postives = 215/216 (99.54%), Query Frame = 0
Query: 1 MAEFPCALERTVASALLLLSTSPPPPPSPPPSPSLPISQDEWLFEEKILGGKCSSEMSPF 60
MAEFPCALERTVASALLLLSTSPPPPPSP PSPS+PISQDEWLFEEKILGGKCSSEMSPF
Sbjct: 1 MAEFPCALERTVASALLLLSTSPPPPPSPQPSPSIPISQDEWLFEEKILGGKCSSEMSPF 60
Query: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP
Sbjct: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
Query: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR
Sbjct: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
Query: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRM 216
RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRM
Sbjct: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRM 216
BLAST of Cp4.1LG10g11540 vs. ExPASy TrEMBL
Match:
A0A6J1HWL4 (uncharacterized protein LOC111467304 OS=Cucurbita maxima OX=3661 GN=LOC111467304 PE=4 SV=1)
HSP 1 Score: 449 bits (1156), Expect = 4.10e-159
Identity = 238/240 (99.17%), Postives = 239/240 (99.58%), Query Frame = 0
Query: 1 MAEFPCALERTVASALLLLSTSPPPPPSPPPSPSLPISQDEWLFEEKILGGKCSSEMSPF 60
MAEFPCALERTVASALLLLSTSPPPP SPPPSPS+PISQDEWLFEEKILGGKCSSEMSPF
Sbjct: 1 MAEFPCALERTVASALLLLSTSPPPPSSPPPSPSIPISQDEWLFEEKILGGKCSSEMSPF 60
Query: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP
Sbjct: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
Query: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR
Sbjct: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
Query: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA 240
RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA
Sbjct: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA 240
BLAST of Cp4.1LG10g11540 vs. ExPASy TrEMBL
Match:
A0A6J1EL58 (uncharacterized protein LOC111435559 OS=Cucurbita moschata OX=3662 GN=LOC111435559 PE=4 SV=1)
HSP 1 Score: 449 bits (1156), Expect = 4.10e-159
Identity = 238/240 (99.17%), Postives = 239/240 (99.58%), Query Frame = 0
Query: 1 MAEFPCALERTVASALLLLSTSPPPPPSPPPSPSLPISQDEWLFEEKILGGKCSSEMSPF 60
MAEFPCALERTVASALLLLSTSPPPPPSP PSPS+PISQDEWLFEEKILGGKCSSEMSPF
Sbjct: 1 MAEFPCALERTVASALLLLSTSPPPPPSPQPSPSIPISQDEWLFEEKILGGKCSSEMSPF 60
Query: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP
Sbjct: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
Query: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR
Sbjct: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
Query: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA 240
RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA
Sbjct: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA 240
BLAST of Cp4.1LG10g11540 vs. ExPASy TrEMBL
Match:
A0A6J1EE02 (uncharacterized protein LOC111432371 OS=Cucurbita moschata OX=3662 GN=LOC111432371 PE=4 SV=1)
HSP 1 Score: 356 bits (913), Expect = 3.61e-122
Identity = 198/240 (82.50%), Postives = 213/240 (88.75%), Query Frame = 0
Query: 1 MAEFPCALERTVASALLLLSTSPPPPPSPPPSPSLPISQDEWLFEEKILGGKCSSEMSPF 60
MAEFPC+LERTVASALLLLSTSPPPPPSPP S + QDEWL EE +GG E++
Sbjct: 1 MAEFPCSLERTVASALLLLSTSPPPPPSPPVS----VCQDEWLSEEDTIGGSFLREITVL 60
Query: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
D SKSCSSVLTRSDESSETRA+E LLFST AYRD+LKL+VVRKSRS+ +RIS NRNLT
Sbjct: 61 YDYSKSCSSVLTRSDESSETRAEEPLLFSTQAYRDDLKLHVVRKSRSKLIRISENRNLTS 120
Query: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
TDDVTLSSGS SSE++ CLSSSSSV TSAPI RLVTRAEKKLEMIRH WRK+HVA+AHMR
Sbjct: 121 TDDVTLSSGSVSSESS-CLSSSSSVVTSAPIHRLVTRAEKKLEMIRHVWRKRHVATAHMR 180
Query: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA 240
RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALR+LLKLEEIKRSGTGGRQDPYIYTIA
Sbjct: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRILLKLEEIKRSGTGGRQDPYIYTIA 235
BLAST of Cp4.1LG10g11540 vs. ExPASy TrEMBL
Match:
A0A6J1DFG0 (uncharacterized protein LOC111020004 OS=Momordica charantia OX=3673 GN=LOC111020004 PE=4 SV=1)
HSP 1 Score: 343 bits (881), Expect = 2.69e-117
Identity = 197/240 (82.08%), Postives = 209/240 (87.08%), Query Frame = 0
Query: 1 MAEFPCALERTVASALLLLSTSPPPPPSPPPSPSLPISQDEWLFEEKILGGKCSSEMSPF 60
MAEFPC+LER+VASALLLLSTSPPPPP PPS S +S+DEWLFE KI G K S E+ F
Sbjct: 1 MAEFPCSLERSVASALLLLSTSPPPPPPSPPSRS--VSRDEWLFEVKIEG-KLSRELPAF 60
Query: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
CD SKSCSS+LT DESS+TR QE LLFSTSAY DELKLNVVRKSRS+ +RIS NRN +
Sbjct: 61 CDYSKSCSSILT-GDESSKTREQEPLLFSTSAYGDELKLNVVRKSRSKLIRISENRNASS 120
Query: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
DD TLSSGSASSET+ CLSSSS+V TSAP RRLVTRAEKKLEMIRH WRKK VASAHMR
Sbjct: 121 ADDATLSSGSASSETS-CLSSSSNVVTSAPCRRLVTRAEKKLEMIRHVWRKKQVASAHMR 180
Query: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA 240
RRAEAIL YLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIY IA
Sbjct: 181 RRAEAILMYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYMIA 235
BLAST of Cp4.1LG10g11540 vs. ExPASy TrEMBL
Match:
A0A0A0L130 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G165910 PE=4 SV=1)
HSP 1 Score: 334 bits (856), Expect = 1.60e-113
Identity = 188/240 (78.33%), Postives = 201/240 (83.75%), Query Frame = 0
Query: 1 MAEFPCALERTVASALLLLSTSPPPPPSPPPSPSLPISQDEWLFEEKILGGKCSSEMSPF 60
MAEFP LERTVASALLLLS SP PP S PIS+DEWLFEEK + GKCS EMS F
Sbjct: 1 MAEFPSPLERTVASALLLLSISPSPP-------STPISEDEWLFEEKNIEGKCSREMSAF 60
Query: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
C+ S S SS+LT SD SS T E LLFSTS R +LKLNVVRKSRS+ VRIS NRNL+
Sbjct: 61 CEHSNSSSSILTTSDASSHTPPLERLLFSTSPCRHQLKLNVVRKSRSKLVRISENRNLSS 120
Query: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
TD+VTLSSGSASSETT CLSSSSSV TS PI RLVTRAEKKLEMIRHAWRKK +ASAHMR
Sbjct: 121 TDEVTLSSGSASSETTSCLSSSSSVVTSTPIHRLVTRAEKKLEMIRHAWRKKQIASAHMR 180
Query: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTIA 240
RRAEAILSYLS GCSSEVKIR+V+GDSPDTSKALR+LLKLEEIKRSGTGGRQDPY+Y IA
Sbjct: 181 RRAEAILSYLSDGCSSEVKIRKVIGDSPDTSKALRILLKLEEIKRSGTGGRQDPYMYKIA 233
BLAST of Cp4.1LG10g11540 vs. TAIR 10
Match:
AT3G57440.1 (unknown protein; Has 31 Blast hits to 31 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 117.1 bits (292), Expect = 2.0e-26
Identity = 102/249 (40.96%), Postives = 136/249 (54.62%), Query Frame = 0
Query: 1 MAEFPCALERTVASALLLLSTSPPPPPSPPPSPSLPISQ--DEWLFEEKILGGKCSSEMS 60
MA +P +ERTVAS+LLLLS P SP S S+ S +W E G + +
Sbjct: 1 MATYPSVIERTVASSLLLLSYG-PVFFSPKRSESVEESSYVRKWCHE-----GSSNLSLM 60
Query: 61 PFCDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGN--- 120
S+SC S L+ + +E + T + RK RS+ + S N
Sbjct: 61 LGSSGSRSCGSALSSDGSFGMSEDREFKINYTGDPFRLMNFKTARKRRSQVIWGSFNFKP 120
Query: 121 --RNLTPTDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWR--K 180
+ P DV LS+ S S+ CLS+ SS + S+ R+ R +K E +R + K
Sbjct: 121 THLKMNPVCDV-LSTCSVDSKDESCLSTGSS-EVSSVESRIKVRNQKSNEKLRGGGKTMK 180
Query: 181 KHVASAHMRRRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGR 240
+ S+ +RRRA+ IL +LS SSEV IRQ+LGDSPDTSKALRMLLK+EE+KR GTGGR
Sbjct: 181 ESSRSSSIRRRAKDILEFLSSESSSEVHIRQILGDSPDTSKALRMLLKMEEVKRFGTGGR 240
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023544086.1 | 2.53e-160 | 100.00 | uncharacterized protein LOC111803781 [Cucurbita pepo subsp. pepo] | [more] |
XP_022967938.1 | 8.48e-159 | 99.17 | uncharacterized protein LOC111467304 [Cucurbita maxima] | [more] |
XP_022928741.1 | 8.48e-159 | 99.17 | uncharacterized protein LOC111435559 [Cucurbita moschata] | [more] |
KAG7033525.1 | 1.71e-158 | 99.17 | hypothetical protein SDJN02_03247, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6603217.1 | 4.02e-140 | 99.07 | hypothetical protein SDJN03_03826, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HWL4 | 4.10e-159 | 99.17 | uncharacterized protein LOC111467304 OS=Cucurbita maxima OX=3661 GN=LOC111467304... | [more] |
A0A6J1EL58 | 4.10e-159 | 99.17 | uncharacterized protein LOC111435559 OS=Cucurbita moschata OX=3662 GN=LOC1114355... | [more] |
A0A6J1EE02 | 3.61e-122 | 82.50 | uncharacterized protein LOC111432371 OS=Cucurbita moschata OX=3662 GN=LOC1114323... | [more] |
A0A6J1DFG0 | 2.69e-117 | 82.08 | uncharacterized protein LOC111020004 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
A0A0A0L130 | 1.60e-113 | 78.33 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G165910 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G57440.1 | 2.0e-26 | 40.96 | unknown protein; Has 31 Blast hits to 31 proteins in 11 species: Archae - 0; Bac... | [more] |