Cp4.1LG10g11110 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATTCACAAGACCCAGAAGGCAAAACCCAAACCCAGATCCCCATTCCTCTTCTTCTTCGTTGCCCTCGCCGTCATTGCGTTTCTTTTCCTATTTTCCTCTCTGATTTCCACTAATGGGGTTTCTTCTTCTTCTTTTCCATCATCAAATTCGATTCGTGAAATCTTCAGATTCAAGAATTTGAACCAGAAACAGAGACGTAATCGGCACGTTTTTAGTACGAACGACAAGTTCTTGTACTGGGGCAACAGAATCGACTGTCCTGGGAAGCATTGCGAGTCTTGCGAGGGTTTGGGTCACCAGGAGTCCAGCTTGAGGTGCGCCCTTGAGGAAGCCATGTTCCTCCAGAGGTAATTTTCATGAAGTTTTTCTGATTTCTGGGGCTTAATCTTTACATGAACATGTTTTCTCCTAGTTTAATTTGGTGGATTGGCATGTTAAGATTTCTGTGTGAAAGGGGTTTGGAATTGGATTAGCAGTAACTCATCAGCACTCGGGTGGTTCTATCACTAAATGTAGAATTAACCGTTGAGGATGGTTGGGAGGGAGTCCCACGTTGGCTAATACATCTCTAGAGGAAAGCCATGAGTGCTTACACTCAATGTGGACAATAGCATACCATTGTGGAGATACGTGGTATTAGAGTCATGCCTTTAACTTAACCATGTCAATAGAATCCTCAAATGTTGAACAAAGAAGTCGTGAGCCTCAATTAAGGGGAGGTTGTTTGAGGACTCTATAGGCCTCAAGGGAGGCTCTATGGCGTACTTCGTTCGAGGGGAGGATTGTGGAGATTCGTGATTCCTAACATTATCATATTGTGAAACTCACGAGTTCAAGAACTTCTGTTGGCCCCTTGCTTGATCTTTATGCTGTGTTATTGCTATGAGGTGCCATTTAGCTTGTCTCAGCTCTTTGTAATGGTAATGGATTGGTCCAACGCCCTTAAATTCAGCATAATTTATTGGTAGAATGCTTTTGCATAACCTACTTAGACAATTTACTTTACTTTCTTTTTGGTGCAGAGTATTTGTAATGCCCTCTAGAATGTGTATCAACCCTATACACAATAAGAAAGGGATTCTTCATCAGTCAACCAATGCAAGCTCAGAGGAAAGGTGCTTCTTCCTCTTTGCTAATCCTATAATGAGTTATACTTGATGATAGTTGAAACGGTATTCAATTGATTCGCTTCATGCTTCAAACTAAGACGCGAACTCCCTTGCATAAAAATCTTTGTTCTTCATGTGTTTGTGATCTTTTCTAGAAAGAACACAGAATCTGAATTTGTTCTCTGCATTGCAGATGGGAAACAAACTCTTGTGCCATGGATTCGTTGTACGATATGGATCTTATATCTGATACCGTACCGGTGATTTTAGACAACTCAAAATTATGGTATCAGGTGCAGTCAACTGGTATGAAATTAGGATCTAGAGTGGTTGCCCATGTTGATCAAGTTAGTCGTATTGAACTCAGAGACGACAGCCGCTACTCCAATCTTTTGCTAATAAATCGAACTGCCAGCCCTCTTTCATGGTAAATCAAACTTGGGGTAATAAGATTCTTTTATGTCTTTTGCATGTGTCTGTGAGATCCCATATCGGTTGGAGAGAGGAACGAAACATTCCTTATAAGAGTGTAGAAACCTCTCCCTAGCAGACGAGTTTTAAAACCTTGAAGGGAAGCCCAGAAGGGAAAACCCAAAGAGGACAATATCTAGTGGCGGTGGGATTGGGCTGTTACAAATGTTATCAGAGCCAAACACCGGGCGGTGTGCCAGCGAGGACGTTGGTCCTCCAAGGGGGGTGGATTGCGAGATCCCACATCGGTTGGAGAGGGGAACAAAACATTCCTTATAAGAGTGTAGAAACCTTTCCCTAGCAAACACGTTTTAAAATATTGAGGGGAAGCCCAGAAGGAAAAACCCAAAGAGGACACTATCTACTAGCGGTGAGCTTGGGCTGTTACAAATAGTATCAGAACCAGACACCAGGCAGTGTGCCACCGGGCGGTAAAAGCTCAATTAGGCTCGTCTTTTTAATGTTTTGTTTTCATGCATTTCTTTGCAACTTGGTACGACGGATATTTCAATTTAAGATCCCAATTTATGAATGATTAGGGCGTTAATGCCGTGATAACTCTTTAGGTTTATGGAATGCAAGGACAGAAACAACCGCAGTGCCATATTGTTGCCCTATAAATTTCTTCCTTCTATGGCAGCAGAAAACTTGAGGGATGCATCTGAGAAGGTATTTTTTGAAACCATATTAGGTTCTTTCTTTTGTTATTCATATTTGCAGTCTTCTACGAATCATGACATACGGTAGAGCCTATCGCTGTTAACTCGCTGCTTACGAAACCTAGCTTTCGTGCATTTCTTTATTTCTACGTTGCTGTTGAATAGTTGTAGTAGATGCTCAACTTCAGTGTTATAAGATAAGGCATTTTCTTTATTTGGTCTTCCCGGATGCTTCTTAGCATAAACTCACCCTCTTAGAAAATATAATTACTGAACTCTTGATCGACCGAAAAGACTTCACTTTAGATACCCTGACACGAATAACGAACCCTAATTTAAAGACTCACGAGGGAAGTAGGCATAATTTTTAGAAACAAGAAACTAAAAACATAATGGTTACCTATTGAGGCCTAATTTTCCTCTCCTAGGATGACCCTAGCCAGTTCCCTTGCCGGGCTTGGAGGTTTGATTGAAAGTAGCGCTCGAGGATTGTAATTGGAAATGGAAGCTTGGTTCCCCTCGCACTCCACTCTATTTTGAATTAGGGATTTGCCTCTTTCTTTCTCTACCGCCTGTGTCTATCTCCTGTCAGACTTTCCACCCGTAGGATCGCTTCTAAGTCCAATATCCAAAGTACTTGGAAATTCGTCTTTTTCCGTCTTTGATGAACTTTGAAGTTTTGTCATCAGGCCATGGTTGTATAATGGTGAAAGGCAGAAGAACATAGAAGGGCTTGTATGCAAACATTTGCAGAAGCAAGCCAGTTGTAACCATTATTTATGGATAGGTTTGTAGAAAATCTTGGAAGTACCTGAAACTTTATGGTTTTGGTGCCTTGGAAACTGTACAGAAGGCATATTTCTTTATTTCATAGGAAAATTCGATAAATCCGAAGCGAGTAATTAGCTACAGTGAGTGGTTGGTAAGCCTTGTATTAGCTCGAGACCGAGTTTGTTTGCAGTTCTCTGTTTCTGTTTGGGTTACTTATATGTTATACTGTGTGTAATAGCTGTGAGAAAAGATTACAAGTTGTTTCTCATTCATTTTGGAATATAGTTCTATAAGTAATACTGAAAAGAATGTCTGATCAATAGATTAAAGAGCTACTCGGTGATTACGACGCCATCCATGTTCGTCGTGGAGATAAAATAAAGACCAGAAAGGACAGGTTTGGTGTTGATAGAAGCTTACATCCACATCTCGACAGGGATACACGGCCTGAGTTTATGCTAAAGAGAATAGCAAAGTGGGTTCCGCCAGGGCGGACACTTTTTATTGCTTCAAATGAGAGAACGCCGGGGTTCTTCTCGCCCCTCTCTGCTCGGTGAGTCCATCTCACTTACCTTTTTAGTTCACTCGAGTTAGAGCTGAAATGTTGGTTAGACTTCGTTCAAAAGATCGATCTTCTTGTGTTCTGATAGCGATATTATAAATCATTGAACCGTCTCTCATTTAGTCCTACCACCACCACCACCACCACCACCACCTTGATTCATGATACCCCAATTTTGCAGGTACAAGTTGGCTTATTCCTCGAACTATAGCCATATTCTGGATCCTGTGGTTAAGAACAATTATCAGTTGTTCATGATCGAAAGGCTCGTTATGGCGGGTGCCAAGACATTCATCAGAACGTTCAAAGAAGACGATACAGATCTTAGCCTCACCGATGACCCAAAGAAGAACACGAAAGTGTGGCAAAAACCAATCTACACAGATGACGAAGAAAGTAGCTGAGGATTTGTTATTTCACTGAGATGTCATTTTGATCCATGCTAATGCCAAACCAACAAAAGCCTTTCATTGCTCGTTGTAAAGCTTCATATGAATGAATGGTAATAGAAAGGGTAGATTCTTGGCCGATGATGTTGTATATGTGGTATAAATTATGATCCTGGTTTCTGAATTTCATTACTTCCATTTCTTTAGCGTCACGTTTTTTTTTTTTTTTTTTTTTTTTTTT ATGGCGATTCACAAGACCCAGAAGGCAAAACCCAAACCCAGATCCCCATTCCTCTTCTTCTTCGTTGCCCTCGCCGTCATTGCGTTTCTTTTCCTATTTTCCTCTCTGATTTCCACTAATGGGGTTTCTTCTTCTTCTTTTCCATCATCAAATTCGATTCGTGAAATCTTCAGATTCAAGAATTTGAACCAGAAACAGAGACGTAATCGGCACGTTTTTAGTACGAACGACAAGTTCTTGTACTGGGGCAACAGAATCGACTGTCCTGGGAAGCATTGCGAGTCTTGCGAGGGTTTGGGTCACCAGGAGTCCAGCTTGAGGTGCGCCCTTGAGGAAGCCATGTTCCTCCAGAGAGTATTTGTAATGCCCTCTAGAATGTGTATCAACCCTATACACAATAAGAAAGGGATTCTTCATCAGTCAACCAATGCAAGCTCAGAGGAAAGATGGGAAACAAACTCTTGTGCCATGGATTCGTTGTACGATATGGATCTTATATCTGATACCGTACCGGTGATTTTAGACAACTCAAAATTATGGTTTATGGAATGCAAGGACAGAAACAACCGCAGTGCCATATTGTTGCCCTATAAATTTCTTCCTTCTATGGCAGCAGAAAACTTGAGGGATGCATCTGAGAAGATTAAAGAGCTACTCGGTGATTACGACGCCATCCATGTTCGTCGTGGAGATAAAATAAAGACCAGAAAGGACAGGTTTGGTGTTGATAGAAGCTTACATCCACATCTCGACAGGGATACACGGCCTGAGTTTATGCTAAAGAGAATAGCAAAGTGGGTTCCGCCAGGGCGGACACTTTTTATTGCTTCAAATGAGAGAACGCCGGGGTTCTTCTCGCCCCTCTCTGCTCGGTACAAGTTGGCTTATTCCTCGAACTATAGCCATATTCTGGATCCTGTGGTTAAGAACAATTATCAGTTGTTCATGATCGAAAGGCTCGTTATGGCGGGTGCCAAGACATTCATCAGAACGTTCAAAGAAGACGATACAGATCTTAGCCTCACCGATGACCCAAAGAAGAACACGAAAGTGTGGCAAAAACCAATCTACACAGATGACGAAGAAAGTAGCTGAGGATTTGTTATTTCACTGAGATGTCATTTTGATCCATGCTAATGCCAAACCAACAAAAGCCTTTCATTGCTCGTTGTAAAGCTTCATATGAATGAATGGTAATAGAAAGGGTAGATTCTTGGCCGATGATGTTGTATATGTGGTATAAATTATGATCCTGGTTTCTGAATTTCATTACTTCCATTTCTTTAGCGTCACGTTTTTTTTTTTTTTTTTTTTTTTTTTT ATGGCGATTCACAAGACCCAGAAGGCAAAACCCAAACCCAGATCCCCATTCCTCTTCTTCTTCGTTGCCCTCGCCGTCATTGCGTTTCTTTTCCTATTTTCCTCTCTGATTTCCACTAATGGGGTTTCTTCTTCTTCTTTTCCATCATCAAATTCGATTCGTGAAATCTTCAGATTCAAGAATTTGAACCAGAAACAGAGACGTAATCGGCACGTTTTTAGTACGAACGACAAGTTCTTGTACTGGGGCAACAGAATCGACTGTCCTGGGAAGCATTGCGAGTCTTGCGAGGGTTTGGGTCACCAGGAGTCCAGCTTGAGGTGCGCCCTTGAGGAAGCCATGTTCCTCCAGAGAGTATTTGTAATGCCCTCTAGAATGTGTATCAACCCTATACACAATAAGAAAGGGATTCTTCATCAGTCAACCAATGCAAGCTCAGAGGAAAGATGGGAAACAAACTCTTGTGCCATGGATTCGTTGTACGATATGGATCTTATATCTGATACCGTACCGGTGATTTTAGACAACTCAAAATTATGGTTTATGGAATGCAAGGACAGAAACAACCGCAGTGCCATATTGTTGCCCTATAAATTTCTTCCTTCTATGGCAGCAGAAAACTTGAGGGATGCATCTGAGAAGATTAAAGAGCTACTCGGTGATTACGACGCCATCCATGTTCGTCGTGGAGATAAAATAAAGACCAGAAAGGACAGGTTTGGTGTTGATAGAAGCTTACATCCACATCTCGACAGGGATACACGGCCTGAGTTTATGCTAAAGAGAATAGCAAAGTGGGTTCCGCCAGGGCGGACACTTTTTATTGCTTCAAATGAGAGAACGCCGGGGTTCTTCTCGCCCCTCTCTGCTCGGTACAAGTTGGCTTATTCCTCGAACTATAGCCATATTCTGGATCCTGTGGTTAAGAACAATTATCAGTTGTTCATGATCGAAAGGCTCGTTATGGCGGGTGCCAAGACATTCATCAGAACGTTCAAAGAAGACGATACAGATCTTAGCCTCACCGATGACCCAAAGAAGAACACGAAAGTGTGGCAAAAACCAATCTACACAGATGACGAAGAAAGTAGCTGA MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTNGVSSSSFPSSNSIREIFRFKNLNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVFVMPSRMCINPIHNKKGILHQSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWFMECKDRNNRSAILLPYKFLPSMAAENLRDASEKIKELLGDYDAIHVRRGDKIKTRKDRFGVDRSLHPHLDRDTRPEFMLKRIAKWVPPGRTLFIASNERTPGFFSPLSARYKLAYSSNYSHILDPVVKNNYQLFMIERLVMAGAKTFIRTFKEDDTDLSLTDDPKKNTKVWQKPIYTDDEESS Homology
BLAST of Cp4.1LG10g11110 vs. NCBI nr
Match: XP_023545162.1 (uncharacterized protein LOC111804548 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 714 bits (1842), Expect = 1.98e-258 Identity = 364/411 (88.56%), Postives = 364/411 (88.56%), Query Frame = 0
BLAST of Cp4.1LG10g11110 vs. NCBI nr
Match: KAG7033584.1 (hypothetical protein SDJN02_03308 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 709 bits (1830), Expect = 1.33e-256 Identity = 361/411 (87.83%), Postives = 362/411 (88.08%), Query Frame = 0
BLAST of Cp4.1LG10g11110 vs. NCBI nr
Match: XP_022967807.1 (uncharacterized protein LOC111467213 isoform X1 [Cucurbita maxima]) HSP 1 Score: 707 bits (1825), Expect = 7.43e-256 Identity = 362/411 (88.08%), Postives = 363/411 (88.32%), Query Frame = 0
BLAST of Cp4.1LG10g11110 vs. NCBI nr
Match: XP_022932889.1 (uncharacterized protein LOC111439414 isoform X1 [Cucurbita moschata]) HSP 1 Score: 695 bits (1793), Expect = 5.58e-251 Identity = 357/411 (86.86%), Postives = 359/411 (87.35%), Query Frame = 0
BLAST of Cp4.1LG10g11110 vs. NCBI nr
Match: XP_022153942.1 (uncharacterized protein LOC111021332 [Momordica charantia]) HSP 1 Score: 658 bits (1697), Expect = 2.44e-236 Identity = 330/411 (80.29%), Postives = 346/411 (84.18%), Query Frame = 0
BLAST of Cp4.1LG10g11110 vs. ExPASy TrEMBL
Match: A0A6J1HRU4 (O-fucosyltransferase family protein OS=Cucurbita maxima OX=3661 GN=LOC111467213 PE=3 SV=1) HSP 1 Score: 707 bits (1825), Expect = 3.60e-256 Identity = 362/411 (88.08%), Postives = 363/411 (88.32%), Query Frame = 0
BLAST of Cp4.1LG10g11110 vs. ExPASy TrEMBL
Match: A0A6J1EY95 (uncharacterized protein LOC111439414 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439414 PE=4 SV=1) HSP 1 Score: 695 bits (1793), Expect = 2.70e-251 Identity = 357/411 (86.86%), Postives = 359/411 (87.35%), Query Frame = 0
BLAST of Cp4.1LG10g11110 vs. ExPASy TrEMBL
Match: A0A6J1DKB9 (O-fucosyltransferase family protein OS=Momordica charantia OX=3673 GN=LOC111021332 PE=3 SV=1) HSP 1 Score: 658 bits (1697), Expect = 1.18e-236 Identity = 330/411 (80.29%), Postives = 346/411 (84.18%), Query Frame = 0
BLAST of Cp4.1LG10g11110 vs. ExPASy TrEMBL
Match: A0A5D3DWC1 (O-fucosyltransferase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold749G00060 PE=3 SV=1) HSP 1 Score: 644 bits (1660), Expect = 4.57e-231 Identity = 328/408 (80.39%), Postives = 340/408 (83.33%), Query Frame = 0
BLAST of Cp4.1LG10g11110 vs. ExPASy TrEMBL
Match: A0A1S3C1H9 (O-fucosyltransferase family protein OS=Cucumis melo OX=3656 GN=LOC103495824 PE=3 SV=1) HSP 1 Score: 644 bits (1660), Expect = 4.57e-231 Identity = 328/408 (80.39%), Postives = 340/408 (83.33%), Query Frame = 0
BLAST of Cp4.1LG10g11110 vs. TAIR 10
Match: AT2G41150.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 127 Blast hits to 127 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 451.8 bits (1161), Expect = 5.1e-127 Identity = 236/404 (58.42%), Postives = 283/404 (70.05%), Query Frame = 0
BLAST of Cp4.1LG10g11110 vs. TAIR 10
Match: AT3G56750.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41150.2); Has 128 Blast hits to 128 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). ) HSP 1 Score: 451.1 bits (1159), Expect = 8.7e-127 Identity = 236/403 (58.56%), Postives = 285/403 (70.72%), Query Frame = 0
BLAST of Cp4.1LG10g11110 vs. TAIR 10
Match: AT2G41150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 233.0 bits (593), Expect = 3.7e-61 Identity = 130/261 (49.81%), Postives = 159/261 (60.92%), Query Frame = 0
BLAST of Cp4.1LG10g11110 vs. TAIR 10
Match: AT4G08810.1 (calcium ion binding ) HSP 1 Score: 77.8 bits (190), Expect = 2.0e-14 Identity = 75/313 (23.96%), Postives = 120/313 (38.34%), Query Frame = 0
BLAST of Cp4.1LG10g11110 vs. TAIR 10
Match: AT4G12700.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04280.1); Has 136 Blast hits to 136 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). ) HSP 1 Score: 76.6 bits (187), Expect = 4.5e-14 Identity = 68/296 (22.97%), Postives = 118/296 (39.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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