Cp4.1LG10g10790 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g10790
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	GrpE protein homolog
Location	Cp4.1LG10: 6666956 .. 6670309 (+)
RNA-Seq Expression	Cp4.1LG10g10790
Synteny	Cp4.1LG10g10790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGAACGTCCTACCTTCTTCCTCTCCTCCTTACCCTTATCTCTCTCTTTGCTCTGTAAATTCTCTCATGGCGACGGTTCTCAGAACTCCATTTTTTCAGGCAACTCCTCCGGCAACTGTATCCACGATTTCCTCATCCAAATCCACCCTTAAACCCTTATCTGTATCCTTTAGAACCTCTCACGCTACCATTTCTTGCATCAATTCCTCCAAGTTTTCACTTCGTCCTCGTTCTCTCCGGTTCCCGAAGCTTGCCCCGTTTTCTTCCTCCGGTGAAACGGAAATTAGCGAGGTCGAAGAGGAAGTTCGTGAATCTGAGGCTGAGGTACACTTAATTCTTCTTCTTATTTGGGGCTATTTTACCGTTTGGTTGCTGTGTCTTTACCGGACTATTGTAGTTTGACTCTTTAGTTGATTAGGTTGGATAGTGTTGGAGGATATTGTTTTATGCAGAGGAGTTTCTAGGATCGCGTTGTTATGTCTAATATTATCAATTTGTGCGAATTTGCCTCTTGGATTGCTGTTACGAAACAGTTTTGTAAGAGGAAATGCGGCATTCTGGCATTATCTTCAATTCATTGTCTATTTCTGTGTTCTAATTATTCTACTGAATTATCTATGAAGTAAGACATTTGATTCTCAAATCTCACCTTGAATTTATCCACTTGACATTTCAAATTTTTGTATTAACTAAAAAAATTGAGTATGGAAGCAGTTTTCGTAGTTCTGGGGCCATTATTCGAGTTTGGTTTAATCATTCCTCTATGTTCTATGCAGCTTTTTGGATACTACAATAATATAATCAAATGATGGGACCATAAACTCCATTCAATTCAAGACTAAAATTTAGGTGTGTTGAAATGAAACATGGTCCATGAAGCATAAACTATGCTCTTTTAAACCTGCAAGTATGGACTATTGATTTTGTTTTTTAAAATTTGAAGATTTTGGATATTGGATGCTTAGAGAGTGTAATAAACTATGAGAAATGAATTCACACAGCACGGGTTTCGATTGTTTTAATTAAGTTTATACTAAAATCATGTCCTTGTGCTTTCTTGTTGCTCATGTATTTATGTAACAGGACTCTTCTGTTAGTTATACTGGTGTGGAAGATGCTGCAAGTGATAGTGATATAAGTGATGATGCAGAAGTTAATGCTGAGGATGTGGCTCAGTCAGTTATTATATCAGCACTTCAATCCTATAAGCAGGCTTTAGCAGATAACAATGGAGCTCAAATAGTTGAAATAGAGTCATATCTGAAGTCGATCGAAGATGAAAAGCTCGCAGTTGAAAGGAAGTTGGAATCCCTAACTGAAGAACTCTCTGTAGAGAAGGTTCGAATTTTGAGAATCAGTGCCGACTTTGATAATTTTAGGAAGAGAACAGAGCGAGAACGTCTTTCATTGGTAAAAAATGCTCAAGGGGAAGTGGTAGAGACGCTATTGGGTGTCCTGGATAATTTTGAGAGAGCTAGGGCACAGATCAAGGTGGAGACAGAGGGAGAAGAAAAGATCAATCAGAGTTACCAAAGCATCTATAAGCAGTTCACTGAGATTTTGGGCTCATTGGGTGTAGTTCCTGTTGAGACAATTGGGAAACCTTTTGACCCACTGGTGAGTTCTTGCTTCTTGTCATCTTATTGAATTTGCATCTCATGTGCCTCATTTTCCCTTTATTCATCAAAGTTAAGTCACTATTAATCAGTCAGTGGTGCTAATAACTGAACTTGTTAATAATTGATGAACCTGTTTTCTAAATCAAATTGTTTAAATTGTTTTGTTCTTGGAGTATCTGCACATGACGGATTTAGTTAATACCGACTCTAGAAACTAAGAAAGTGTAGGGTCTTTCCTTGCAAACCTTACAATCATTACTGGATGAACTTTTCCTGAAATCTGATTTTTGAATCTCAAATATGAACATGGTTTGAACCGACCTGTTGAGATTCATTTATTTTTGTAGATTTTGGCCATAGGAAAACTAAGAATTGTGATCTTTTGCTCTCATTTTTGTTTTGCACTGATAATGATGAGAGGGTAAATCATAATTTATTTCATAGTGTTCATTGCAAAAAATATGTGATGTAAATTATCTGTGGAGTTCCCTGGATCCATCCATAAGAAGTGATGCATCTTATAATGGGTTATTTTTCATGGAAAAGGATCAAAGAAGAGAAAGTTACTTTGGAAGTGTGCTATCTTGGATCCGTTATCGGTTTTATGGTTGGAGATCGATAAAAGAATTATTGAAGATAAATTTGAAGATCTAGACCAGGTTCAGAGTGAATCTGATAGTGTACATTGTTGGAGCAAAAAGGTAGAAGACTTTACTAGTTCTACCTCTCAGGCTATTTGTTCAAAAGGTGATTTTTTGTCGGTAAATTTATGCTTCAAGGAGGCCTTGTCCTCCTGTAATATTGTAACTTATTCAAATTGTTATTATCAATGACAAGGCTACTATTTCTGTCTGATATTGTGATTTTTCGACTACCTTCAATCACATTGAATTCTGAGGTGATGTGTTTTTCTTTTTTGAAATCTACTCGATTTGCATTCTAAACTAGCATGACATGATCAAACATGGAACTAATCAGGGTTCTGCTGTTTAATCTCTCTTTTTGGGGGATCAAGTTTGGTAAGTTGAAACTTCTTTAATCAATTTCTTGCTACAGCTTCATGAAGCAATTATGAGGGAGGACTCCACAGAGTTTGAGGAAGGCATCATACTCAACGAGTTCCGCAAAGGATTCTTGCTTGGTGAGAGACTCCTGCGTCCATCAATGGTGAAAGTATCAGCCGGTCCAGGGCCTGAAAAGTCGGATGAAGCAGCAGCATCAGAAGAACACGATTCGAGTGAAAACTCGGAGGGCTCCGAATCGGAGCCATCTTAAAACTCGAATGAACACAATCCAATTTTGAATATAGTTTTTGAATCTTCTTGGTGGGTGATAAGAGATTGGAGATGGGAGTTTATTGTTGTTCTTGGTTATCAGGGTTTTGCAGGCGGAGAATTTAGATATCTGTTCTCAGGGGAAGGAAGTGTTAGTGGAATGTTGTAGTTGATTTAGATATTGCTTGCTATAAGTTGTAGAAATGGTTGAATGTGCCTTGGATTTCTGATGCCAAAATGGCATGGCAGGTCTCCTCTGTAGGACCATATTTATTTGAAGGAAATTGAAATCACTCTCTCTTTCATTGTTATTTCTGTTCATTATATTAACTTACAAACTTCTATTAGGGAATGGATGGACCCAAGAATTGTTTCCAATGTAGGTTGGACCTATTTGGACATCAAGAATTATTTCTTTGATTTATTTAAGGAGATTGAGAAGTAATATTCTTATTTTGGT

mRNA sequence

CTCGAACGTCCTACCTTCTTCCTCTCCTCCTTACCCTTATCTCTCTCTTTGCTCTGTAAATTCTCTCATGGCGACGGTTCTCAGAACTCCATTTTTTCAGGCAACTCCTCCGGCAACTGTATCCACGATTTCCTCATCCAAATCCACCCTTAAACCCTTATCTGTATCCTTTAGAACCTCTCACGCTACCATTTCTTGCATCAATTCCTCCAAGTTTTCACTTCGTCCTCGTTCTCTCCGGTTCCCGAAGCTTGCCCCGTTTTCTTCCTCCGGTGAAACGGAAATTAGCGAGGTCGAAGAGGAAGTTCGTGAATCTGAGGCTGAGGACTCTTCTGTTAGTTATACTGGTGTGGAAGATGCTGCAAGTGATAGTGATATAAGTGATGATGCAGAAGTTAATGCTGAGGATGTGGCTCAGTCAGTTATTATATCAGCACTTCAATCCTATAAGCAGGCTTTAGCAGATAACAATGGAGCTCAAATAGTTGAAATAGAGTCATATCTGAAGTCGATCGAAGATGAAAAGCTCGCAGTTGAAAGGAAGTTGGAATCCCTAACTGAAGAACTCTCTGTAGAGAAGGTTCGAATTTTGAGAATCAGTGCCGACTTTGATAATTTTAGGAAGAGAACAGAGCGAGAACGTCTTTCATTGGTAAAAAATGCTCAAGGGGAAGTGGTAGAGACGCTATTGGGTGTCCTGGATAATTTTGAGAGAGCTAGGGCACAGATCAAGGTGGAGACAGAGGGAGAAGAAAAGATCAATCAGAGTTACCAAAGCATCTATAAGCAGTTCACTGAGATTTTGGGCTCATTGGGTGTAGTTCCTGTTGAGACAATTGGGAAACCTTTTGACCCACTGCTTCATGAAGCAATTATGAGGGAGGACTCCACAGAGTTTGAGGAAGGCATCATACTCAACGAGTTCCGCAAAGGATTCTTGCTTGGTGAGAGACTCCTGCGTCCATCAATGGTGAAAGTATCAGCCGGTCCAGGGCCTGAAAAGTCGGATGAAGCAGCAGCATCAGAAGAACACGATTCGAGTGAAAACTCGGAGGGCTCCGAATCGGAGCCATCTTAAAACTCGAATGAACACAATCCAATTTTGAATATAGTTTTTGAATCTTCTTGGTGGGTGATAAGAGATTGGAGATGGGAGTTTATTGTTGTTCTTGGTTATCAGGGTTTTGCAGGCGGAGAATTTAGATATCTGTTCTCAGGGGAAGGAAGTGTTAGTGGAATGTTGTAGTTGATTTAGATATTGCTTGCTATAAGTTGTAGAAATGGTTGAATGTGCCTTGGATTTCTGATGCCAAAATGGCATGGCAGGTCTCCTCTGTAGGACCATATTTATTTGAAGGAAATTGAAATCACTCTCTCTTTCATTGTTATTTCTGTTCATTATATTAACTTACAAACTTCTATTAGGGAATGGATGGACCCAAGAATTGTTTCCAATGTAGGTTGGACCTATTTGGACATCAAGAATTATTTCTTTGATTTATTTAAGGAGATTGAGAAGTAATATTCTTATTTTGGT

Coding sequence (CDS)

ATGGCGACGGTTCTCAGAACTCCATTTTTTCAGGCAACTCCTCCGGCAACTGTATCCACGATTTCCTCATCCAAATCCACCCTTAAACCCTTATCTGTATCCTTTAGAACCTCTCACGCTACCATTTCTTGCATCAATTCCTCCAAGTTTTCACTTCGTCCTCGTTCTCTCCGGTTCCCGAAGCTTGCCCCGTTTTCTTCCTCCGGTGAAACGGAAATTAGCGAGGTCGAAGAGGAAGTTCGTGAATCTGAGGCTGAGGACTCTTCTGTTAGTTATACTGGTGTGGAAGATGCTGCAAGTGATAGTGATATAAGTGATGATGCAGAAGTTAATGCTGAGGATGTGGCTCAGTCAGTTATTATATCAGCACTTCAATCCTATAAGCAGGCTTTAGCAGATAACAATGGAGCTCAAATAGTTGAAATAGAGTCATATCTGAAGTCGATCGAAGATGAAAAGCTCGCAGTTGAAAGGAAGTTGGAATCCCTAACTGAAGAACTCTCTGTAGAGAAGGTTCGAATTTTGAGAATCAGTGCCGACTTTGATAATTTTAGGAAGAGAACAGAGCGAGAACGTCTTTCATTGGTAAAAAATGCTCAAGGGGAAGTGGTAGAGACGCTATTGGGTGTCCTGGATAATTTTGAGAGAGCTAGGGCACAGATCAAGGTGGAGACAGAGGGAGAAGAAAAGATCAATCAGAGTTACCAAAGCATCTATAAGCAGTTCACTGAGATTTTGGGCTCATTGGGTGTAGTTCCTGTTGAGACAATTGGGAAACCTTTTGACCCACTGCTTCATGAAGCAATTATGAGGGAGGACTCCACAGAGTTTGAGGAAGGCATCATACTCAACGAGTTCCGCAAAGGATTCTTGCTTGGTGAGAGACTCCTGCGTCCATCAATGGTGAAAGTATCAGCCGGTCCAGGGCCTGAAAAGTCGGATGAAGCAGCAGCATCAGAAGAACACGATTCGAGTGAAAACTCGGAGGGCTCCGAATCGGAGCCATCTTAA

Protein sequence

MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFPKLAPFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVAQSVIISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFLLGERLLRPSMVKVSAGPGPEKSDEAAASEEHDSSENSEGSESEPS

Homology

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BLAST of Cp4.1LG10g10790 vs. ExPASy Swiss-Prot
Match: Q8DJB3 (Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=grpE PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.5e-32
Identity = 75/172 (43.60%), Postives = 116/172 (67.44%), Query Frame = 0


Query: 155 AVERKLESLTEELSVEKVRILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNF 214
           A+E    SL++ +     + +R++ADF+NFRKRT+RE+  L    +  V+  LL V+D+F
Sbjct: 82  ALEAAKASLSQVVEERNSQYIRLAADFENFRKRTQREKEELELQIKCSVIADLLPVVDSF 141

Query: 215 ERARAQIKVETEGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDS 274
           E AR  I+ ETE EEKI++SYQ +YKQ  E L  +GV  ++  GKPFDP LHEA++RE +
Sbjct: 142 ELARTHIQTETEAEEKIHRSYQGVYKQLVECLKRIGVSAMQAKGKPFDPNLHEAVLREAT 201

Query: 275 TEFEEGIILNEFRKGFLLGERLLRPSMVKVSAGPGPEKSDEAAASEEHDSSE 327
            E  EG ++ E ++G++LG+R+LR +MVKV+A P     +E +AS  + +++
Sbjct: 202 NEHPEGTVIEELKRGYMLGDRVLRHAMVKVAAPP-----EEGSASNTNPTND 248

[Close]

BLAST of Cp4.1LG10g10790 vs. ExPASy Swiss-Prot
Match: Q7UA77 (Protein GrpE OS=Synechococcus sp. (strain WH8102) OX=84588 GN=grpE PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.6e-32
Identity = 71/170 (41.76%), Postives = 113/170 (66.47%), Query Frame = 0


Query: 156 VERKLESLTEELSVEKVRILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFE 215
           +E +L++L +E    + + +RI+ADFDNFRKR  R++  + +      +  +L V+DNFE
Sbjct: 49  LEHELQTLKQEHETLQSQYMRIAADFDNFRKRQSRDQEDIRQQLVCSTLSEILPVVDNFE 108

Query: 216 RARAQIKVETEGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDST 275
           RAR Q+  E+E  + +++SYQ +YKQ  ++L   GV  +E +G+ FDP LHEA++RE+ST
Sbjct: 109 RARQQLNPESEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVGQLFDPTLHEAVLREEST 168

Query: 276 EFEEGIILNEFRKGFLLGERLLRPSMVKVSAGPGPEKSDEAAASEEHDSS 326
           E  E +++ E ++G+ L  ++LR ++VKVS GPGP    E AAS E + S
Sbjct: 169 EQPEDVVIEELQRGYHLNGKVLRHALVKVSMGPGPSADAEGAASAEAEDS 218

[Close]

BLAST of Cp4.1LG10g10790 vs. ExPASy Swiss-Prot
Match: B7KLH9 (Protein GrpE OS=Gloeothece citriformis (strain PCC 7424) OX=65393 GN=grpE PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.3e-32
Identity = 72/174 (41.38%), Postives = 115/174 (66.09%), Query Frame = 0


Query: 147 KSIEDEKLAVERKLESLTEELSVEKVRILRISADFDNFRKRTERERLSLVKNAQGEVVET 206
           +S+     +++ +LE   +++   K R + ++A+FDNFRKRT RE+  L K A+ + +  
Sbjct: 103 ESLLQTNQSLKDQLEEQNQQIDAAKRRYIGLAAEFDNFRKRTLREKEELEKQAKRKTLSE 162

Query: 207 LLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLH 266
           LL V+DNFERAR QIK   EGE +I++SYQ +YK   + L  LGV  +   G+PFDP+ H
Sbjct: 163 LLTVVDNFERARLQIKPSNEGEGEIHKSYQGVYKNLVDSLKRLGVSAMRAEGEPFDPMYH 222

Query: 267 EAIMREDSTEFEEGIILNEFRKGFLLGERLLRPSMVKVSAGPGPEKSDEAAASE 321
           EA++RE + +F EG ++ +  +G+LL +++LR +MVKV+A   P+ S+  + SE
Sbjct: 223 EAMLREPTNDFPEGTVIEQLVRGYLLDDQVLRHAMVKVAAPKEPDSSETESTSE 276

[Close]

BLAST of Cp4.1LG10g10790 vs. ExPASy Swiss-Prot
Match: Q3B0Y4 (Protein GrpE OS=Synechococcus sp. (strain CC9902) OX=316279 GN=grpE PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.8e-31
Identity = 71/168 (42.26%), Postives = 110/168 (65.48%), Query Frame = 0


Query: 156 VERKLESLTEELSVEKVRILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFE 215
           +E++L SL +E    + + +RI+ADFDNFRKR  R++  L +      +  +L V+DNFE
Sbjct: 54  LEQELNSLKQEHEAVQSQYMRIAADFDNFRKRQARDQDDLRQQLVCSTLTEILPVVDNFE 113

Query: 216 RARAQIKVETEGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDST 275
           RAR Q+  E E  + +++SYQ +YKQ  ++L   GV  +E +G+ FDP LHEA++RE++ 
Sbjct: 114 RARQQLNPEGEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVGQEFDPTLHEAVLREENQ 173

Query: 276 EFEEGIILNEFRKGFLLGERLLRPSMVKVSAGPGPEKSDEAAASEEHD 324
           E  E I+  E ++G+    R+LR +MVKVS GPGPE S +AA+ +  +
Sbjct: 174 EHAEDIVCEELQRGYHRDGRVLRHAMVKVSMGPGPESSSDAASEQPQE 221

[Close]

BLAST of Cp4.1LG10g10790 vs. ExPASy Swiss-Prot
Match: A3PA63 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9301) OX=167546 GN=grpE PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.6e-31
Identity = 74/178 (41.57%), Postives = 114/178 (64.04%), Query Frame = 0


Query: 157 ERKLESLTEELSVEKVRILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFER 216
           + +LE L +E    K + +RISADFDNFRKR  R++  L      + +  +L ++DNFER
Sbjct: 60  DARLEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKIQLVSKTLTAILPIVDNFER 119

Query: 217 ARAQIKVETEGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTE 276
           AR Q+K E+E  + +++SYQ +YKQ  E+L   GV P+  +G+ FDP LHEA++RE S E
Sbjct: 120 ARQQLKPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPNLHEAVLREPSEE 179

Query: 277 FEEGIILNEFRKGFLLGERLLRPSMVKVSAGPGPEKSDEAAASEEHDSSENSEGSESE 335
           FEE  I+ E ++G+ L  ++LR ++ KVS GPG +KS +    +  +   +S+ + SE
Sbjct: 180 FEEDFIIEELQRGYHLEGKVLRHALAKVSMGPGKQKSQQEVEKDTVEGDVDSDANTSE 237

[Close]

BLAST of Cp4.1LG10g10790 vs. NCBI nr
Match: XP_023543468.1 (uncharacterized protein LOC111803344 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 602 bits (1553), Expect = 4.29e-216
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP 60
           MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP
Sbjct: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP 60

Query: 61  KLAPFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVAQSVI 120
           KLAPFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVAQSVI
Sbjct: 61  KLAPFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVAQSVI 120

Query: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD 180
           ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD
Sbjct: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD 180

Query: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFLLGERLLRPS 300
           QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFLLGERLLRPS
Sbjct: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFLLGERLLRPS 300

Query: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESEPS 336
           MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESEPS
Sbjct: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESEPS 336

[Close]

BLAST of Cp4.1LG10g10790 vs. NCBI nr
Match: KAG6603429.1 (hypothetical protein SDJN03_04038, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013848.1 grpE [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 592 bits (1527), Expect = 3.92e-212
Identity = 332/336 (98.81%), Postives = 333/336 (99.11%), Query Frame = 0


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP 60
           MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP
Sbjct: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP 60

Query: 61  KLAPFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVAQSVI 120
           KLA FSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVAQSVI
Sbjct: 61  KLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVAQSVI 120

Query: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD 180
           ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD
Sbjct: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD 180

Query: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFLLGERLLRPS 300
           QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDS EFEEGIIL+EFRKGFLLGERLLRPS
Sbjct: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSAEFEEGIILDEFRKGFLLGERLLRPS 300

Query: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESEPS 336
           MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESE S
Sbjct: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESESS 336

[Close]

BLAST of Cp4.1LG10g10790 vs. NCBI nr
Match: XP_022949866.1 (uncharacterized protein LOC111453132 [Cucurbita moschata])

HSP 1 Score: 591 bits (1524), Expect = 1.12e-211
Identity = 331/336 (98.51%), Postives = 333/336 (99.11%), Query Frame = 0


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP 60
           MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP
Sbjct: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP 60

Query: 61  KLAPFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVAQSVI 120
           KLA FSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDI+DDAEVNAEDVAQSVI
Sbjct: 61  KLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDITDDAEVNAEDVAQSVI 120

Query: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD 180
           ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD
Sbjct: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD 180

Query: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFLLGERLLRPS 300
           QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDS EFEEGIIL+EFRKGFLLGERLLRPS
Sbjct: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSAEFEEGIILDEFRKGFLLGERLLRPS 300

Query: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESEPS 336
           MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESE S
Sbjct: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESESS 336

[Close]

BLAST of Cp4.1LG10g10790 vs. NCBI nr
Match: XP_022967837.1 (uncharacterized protein LOC111467228 [Cucurbita maxima])

HSP 1 Score: 578 bits (1491), Expect = 1.20e-206
Identity = 323/336 (96.13%), Postives = 329/336 (97.92%), Query Frame = 0


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP 60
           MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSH+TI CINSSKFSLRPRS+RFP
Sbjct: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHSTICCINSSKFSLRPRSIRFP 60

Query: 61  KLAPFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVAQSVI 120
           KLA FSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDI+DDAEVNAEDVAQSVI
Sbjct: 61  KLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDINDDAEVNAEDVAQSVI 120

Query: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD 180
           ISALQSYKQALADNNGAQIVEIESYLKSIED+K AVE+KLESLTEELS EKVRILRISAD
Sbjct: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDDKFAVEKKLESLTEELSAEKVRILRISAD 180

Query: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFLLGERLLRPS 300
           QF EILGSLGVVPVETIGK FDPLLHEAIMREDSTEFEEGIIL+EFRKGFLLGERLLRPS
Sbjct: 241 QFNEILGSLGVVPVETIGKHFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGERLLRPS 300

Query: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESEPS 336
           MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESE S
Sbjct: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESESS 336

[Close]

BLAST of Cp4.1LG10g10790 vs. NCBI nr
Match: XP_022154525.1 (uncharacterized protein LOC111021782 isoform X1 [Momordica charantia])

HSP 1 Score: 539 bits (1388), Expect = 5.84e-191
Identity = 298/336 (88.69%), Postives = 317/336 (94.35%), Query Frame = 0


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP 60
           MATVLRTPFFQATPPA+VS +SSSKS+LKP S+SFRTSH TI CINSS    RPRSLRFP
Sbjct: 1   MATVLRTPFFQATPPASVSAVSSSKSSLKPSSLSFRTSHTTIYCINSSSMLSRPRSLRFP 60

Query: 61  KLAPFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVAQSVI 120
           K A F+SSGETE+SE+EEEVRESEAEDSSVSY+GVEDAASD+DISDDAEV+ ED+ QSVI
Sbjct: 61  KFARFASSGETEVSEIEEEVRESEAEDSSVSYSGVEDAASDNDISDDAEVDTEDLPQSVI 120

Query: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD 180
           ISAL+SYKQALADNNGAQIVEIES+LKSIEDEKLAVERKL+SLTEEL++EK RILRISAD
Sbjct: 121 ISALESYKQALADNNGAQIVEIESFLKSIEDEKLAVERKLQSLTEELTIEKDRILRISAD 180

Query: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFLLGERLLRPS 300
           QFTEIL SLGVVPVET+GKPFDPLLHEAIMREDSTEFEEGIIL+EFRKGFLLGERLLRPS
Sbjct: 241 QFTEILASLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGERLLRPS 300

Query: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESEPS 336
           MVKVSAGPGPEKSDE A +EE DSSE SEGSESE S
Sbjct: 301 MVKVSAGPGPEKSDEVAPTEEQDSSEKSEGSESESS 336

[Close]

BLAST of Cp4.1LG10g10790 vs. ExPASy TrEMBL
Match: A0A6J1GD85 (GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111453132 PE=3 SV=1)

HSP 1 Score: 591 bits (1524), Expect = 5.44e-212
Identity = 331/336 (98.51%), Postives = 333/336 (99.11%), Query Frame = 0


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP 60
           MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP
Sbjct: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP 60

Query: 61  KLAPFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVAQSVI 120
           KLA FSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDI+DDAEVNAEDVAQSVI
Sbjct: 61  KLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDITDDAEVNAEDVAQSVI 120

Query: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD 180
           ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD
Sbjct: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD 180

Query: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFLLGERLLRPS 300
           QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDS EFEEGIIL+EFRKGFLLGERLLRPS
Sbjct: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSAEFEEGIILDEFRKGFLLGERLLRPS 300

Query: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESEPS 336
           MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESE S
Sbjct: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESESS 336

[Close]

BLAST of Cp4.1LG10g10790 vs. ExPASy TrEMBL
Match: A0A6J1HRX1 (GrpE protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111467228 PE=3 SV=1)

HSP 1 Score: 578 bits (1491), Expect = 5.80e-207
Identity = 323/336 (96.13%), Postives = 329/336 (97.92%), Query Frame = 0


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP 60
           MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSH+TI CINSSKFSLRPRS+RFP
Sbjct: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHSTICCINSSKFSLRPRSIRFP 60

Query: 61  KLAPFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVAQSVI 120
           KLA FSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDI+DDAEVNAEDVAQSVI
Sbjct: 61  KLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDINDDAEVNAEDVAQSVI 120

Query: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD 180
           ISALQSYKQALADNNGAQIVEIESYLKSIED+K AVE+KLESLTEELS EKVRILRISAD
Sbjct: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDDKFAVEKKLESLTEELSAEKVRILRISAD 180

Query: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFLLGERLLRPS 300
           QF EILGSLGVVPVETIGK FDPLLHEAIMREDSTEFEEGIIL+EFRKGFLLGERLLRPS
Sbjct: 241 QFNEILGSLGVVPVETIGKHFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGERLLRPS 300

Query: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESEPS 336
           MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESE S
Sbjct: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESESS 336

[Close]

BLAST of Cp4.1LG10g10790 vs. ExPASy TrEMBL
Match: A0A6J1DJU6 (GrpE protein homolog OS=Momordica charantia OX=3673 GN=LOC111021782 PE=3 SV=1)

HSP 1 Score: 539 bits (1388), Expect = 2.83e-191
Identity = 298/336 (88.69%), Postives = 317/336 (94.35%), Query Frame = 0


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP 60
           MATVLRTPFFQATPPA+VS +SSSKS+LKP S+SFRTSH TI CINSS    RPRSLRFP
Sbjct: 1   MATVLRTPFFQATPPASVSAVSSSKSSLKPSSLSFRTSHTTIYCINSSSMLSRPRSLRFP 60

Query: 61  KLAPFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVAQSVI 120
           K A F+SSGETE+SE+EEEVRESEAEDSSVSY+GVEDAASD+DISDDAEV+ ED+ QSVI
Sbjct: 61  KFARFASSGETEVSEIEEEVRESEAEDSSVSYSGVEDAASDNDISDDAEVDTEDLPQSVI 120

Query: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD 180
           ISAL+SYKQALADNNGAQIVEIES+LKSIEDEKLAVERKL+SLTEEL++EK RILRISAD
Sbjct: 121 ISALESYKQALADNNGAQIVEIESFLKSIEDEKLAVERKLQSLTEELTIEKDRILRISAD 180

Query: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFLLGERLLRPS 300
           QFTEIL SLGVVPVET+GKPFDPLLHEAIMREDSTEFEEGIIL+EFRKGFLLGERLLRPS
Sbjct: 241 QFTEILASLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGERLLRPS 300

Query: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESEPS 336
           MVKVSAGPGPEKSDE A +EE DSSE SEGSESE S
Sbjct: 301 MVKVSAGPGPEKSDEVAPTEEQDSSEKSEGSESESS 336

[Close]

BLAST of Cp4.1LG10g10790 vs. ExPASy TrEMBL
Match: A0A0A0L229 (GrpE protein homolog OS=Cucumis sativus OX=3659 GN=Csa_4G417510 PE=3 SV=1)

HSP 1 Score: 516 bits (1330), Expect = 1.85e-182
Identity = 291/336 (86.61%), Postives = 309/336 (91.96%), Query Frame = 0


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP 60
           MAT+LRTPFFQATPPA+VS  S SKSTLKP S+SF TSH+ I C NSSKFS RP SLRFP
Sbjct: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 60

Query: 61  KLAPFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVAQSVI 120
           K  PF+SSGETEISE+EEEVR+SEAEDSSVSYTGVEDA SD+DISDD+EVN ED  QSVI
Sbjct: 61  K-RPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVI 120

Query: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD 180
           I+ALQSYKQALADN+GAQ+VEIES+LKSIEDEKLAVERKL SL EELSVEK R+LRISAD
Sbjct: 121 IAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISAD 180

Query: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFLLGERLLRPS 300
           QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIIL+EFRKGFLLG+RLLRPS
Sbjct: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPS 300

Query: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESEPS 336
           MVKVSAGPGPEKSDE A +E+ DSSE    SESE S
Sbjct: 301 MVKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS 335

[Close]

BLAST of Cp4.1LG10g10790 vs. ExPASy TrEMBL
Match: A0A6J1HTM7 (GrpE protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111466047 PE=3 SV=1)

HSP 1 Score: 516 bits (1329), Expect = 2.82e-182
Identity = 292/338 (86.39%), Postives = 310/338 (91.72%), Query Frame = 0


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLK--PLSVSFRTSHATISCINSSKFSLRPRSLR 60
           MAT+LR PFFQATPPA VSTI SSKSTLK  P S+SFRTSH+   CINSSK S RPRS+R
Sbjct: 1   MATILRAPFFQATPPANVSTIFSSKSTLKLKPSSLSFRTSHSPFCCINSSKLS-RPRSIR 60

Query: 61  FPKLAPFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVAQS 120
           FPKL PF+SSG TE+SEVEEEV ESEAEDSSVSYTGVEDAASDSDI+D AEVNAED  QS
Sbjct: 61  FPKLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQS 120

Query: 121 VIISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRIS 180
           VI++ALQSYKQALADNN +QI EIES+LKSIEDEKLAVERKL+SLTE+LSVEK RILRIS
Sbjct: 121 VILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAVERKLKSLTEDLSVEKDRILRIS 180

Query: 181 ADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSI 240
           ADF+NFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSI
Sbjct: 181 ADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSI 240

Query: 241 YKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFLLGERLLR 300
           YKQF EILGSLGVVPVET+GKPFDPLLHEAIMREDSTEFEEGIIL+EFRKGFLLG+RLLR
Sbjct: 241 YKQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLR 300

Query: 301 PSMVKVSAGPGPEKSDEAAASEEHDSSENSEGSESEPS 336
           PSMVKVSAGPGPEK  EAA SEEHDSSEN E S +E S
Sbjct: 301 PSMVKVSAGPGPEKPAEAAPSEEHDSSENYERSNTESS 337

[Close]

BLAST of Cp4.1LG10g10790 vs. TAIR 10
Match: AT5G17710.2 (Co-chaperone GrpE family protein )

HSP 1 Score: 305.1 bits (780), Expect = 7.1e-83
Identity = 193/337 (57.27%), Postives = 233/337 (69.14%), Query Frame = 0


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRS---- 60
           MA +L+TP    TP    + + +     KP  VSF      +S   S + SLR  S    
Sbjct: 1   MAGLLKTPSLHLTP----TLLHAPSVPFKPFCVSF-AGGRNVSVSLSRRASLRSVSSGYP 60

Query: 61  LRFPKLAPFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVA 120
           LR   L PF +SGE E +E E E  E E +++     G  D  +++  +++ E   E+ A
Sbjct: 61  LRLLNLVPF-ASGEAETTETEVESNEPEVQETD----GAVDVENENASAEEGEAEEEEAA 120

Query: 121 QSVIISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILR 180
             VI + L+SYK+ALADNN  +I EIE+ LKSIEDEK  +  K+ SL+ ELSVE+ R++R
Sbjct: 121 --VITALLKSYKEALADNNEGKIAEIEASLKSIEDEKFLLADKVASLSNELSVERDRLIR 180

Query: 181 ISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQ 240
           ISADFDNFRKRTERERL+LV NAQGEVVE LL VLDNFERA++QIKVETEGEEK+  SYQ
Sbjct: 181 ISADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEKVTNSYQ 240

Query: 241 SIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFLLGERL 300
           SIYKQF EILGSLGV+ VET+GK FDP+LHEAIMREDS E+EEGI+L E+RKGFLLGERL
Sbjct: 241 SIYKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEGIVLEEYRKGFLLGERL 300

Query: 301 LRPSMVKVSAGPGPEKSDEAAASEEHDSSENSEGSES 334
           LRPSMVKVSAGPGPEK  EA   E        E S S
Sbjct: 301 LRPSMVKVSAGPGPEKPLEAEGEEATAQGSAEEESSS 325

[Close]

BLAST of Cp4.1LG10g10790 vs. TAIR 10
Match: AT5G17710.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 304.7 bits (779), Expect = 9.3e-83
Identity = 194/337 (57.57%), Postives = 232/337 (68.84%), Query Frame = 0


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRS---- 60
           MA +L+TP    TP    + + +     KP  VSF      +S   S + SLR  S    
Sbjct: 1   MAGLLKTPSLHLTP----TLLHAPSVPFKPFCVSF-AGGRNVSVSLSRRASLRSVSSGYP 60

Query: 61  LRFPKLAPFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDISDDAEVNAEDVA 120
           LR   L PF +SGE E +E E E  E E  D +V      D  +++  +++ E   E+ A
Sbjct: 61  LRLLNLVPF-ASGEAETTETEVESNEPEETDGAV------DVENENASAEEGEAEEEEAA 120

Query: 121 QSVIISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILR 180
             VI + L+SYK+ALADNN  +I EIE+ LKSIEDEK  +  K+ SL+ ELSVE+ R++R
Sbjct: 121 --VITALLKSYKEALADNNEGKIAEIEASLKSIEDEKFLLADKVASLSNELSVERDRLIR 180

Query: 181 ISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQ 240
           ISADFDNFRKRTERERL+LV NAQGEVVE LL VLDNFERA++QIKVETEGEEK+  SYQ
Sbjct: 181 ISADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEKVTNSYQ 240

Query: 241 SIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFLLGERL 300
           SIYKQF EILGSLGV+ VET+GK FDP+LHEAIMREDS E+EEGI+L E+RKGFLLGERL
Sbjct: 241 SIYKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEGIVLEEYRKGFLLGERL 300

Query: 301 LRPSMVKVSAGPGPEKSDEAAASEEHDSSENSEGSES 334
           LRPSMVKVSAGPGPEK  EA   E        E S S
Sbjct: 301 LRPSMVKVSAGPGPEKPLEAEGEEATAQGSAEEESSS 323

[Close]

BLAST of Cp4.1LG10g10790 vs. TAIR 10
Match: AT1G36390.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-45
Identity = 94/206 (45.63%), Postives = 146/206 (70.87%), Query Frame = 0


Query: 112 AEDVAQSVIISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEK 171
           A    Q+ + + ++SYKQAL + +   + EIE+    IE EK  +++K+ SL+ +++ EK
Sbjct: 67  ANSKQQADVKTLIRSYKQALLNGDETSVTEIETMFCKIEKEKNKMDQKVLSLSMKIASEK 126

Query: 172 VRILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKI 231
              +R+ ADFDN RK+ +++RLS   NA+ +++++LL ++D+FE+A+ Q++V+T+ E+KI
Sbjct: 127 EMKIRLQADFDNTRKKLDKDRLSTESNAKVQILKSLLPIIDSFEKAKLQVRVDTDKEKKI 186

Query: 232 NQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFL 291
           + SYQ IY+QF E+L  L V  + T+GKPFDPLLHEAI RE+S   + GII  E  KGF+
Sbjct: 187 DTSYQGIYRQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESEAVKAGIITEELNKGFV 246

Query: 292 LGERLLRPSMVKVSAGPGPEKSDEAA 318
           LG+R+LRP+ VKVS GP  +K+  AA
Sbjct: 247 LGDRVLRPAKVKVSLGPVNKKTPSAA 272

[Close]

BLAST of Cp4.1LG10g10790 vs. TAIR 10
Match: AT1G36390.2 (Co-chaperone GrpE family protein )

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-45
Identity = 94/206 (45.63%), Postives = 146/206 (70.87%), Query Frame = 0


Query: 112 AEDVAQSVIISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEK 171
           A    Q+ + + ++SYKQAL + +   + EIE+    IE EK  +++K+ SL+ +++ EK
Sbjct: 67  ANSKQQADVKTLIRSYKQALLNGDETSVTEIETMFCKIEKEKNKMDQKVLSLSMKIASEK 126

Query: 172 VRILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKI 231
              +R+ ADFDN RK+ +++RLS   NA+ +++++LL ++D+FE+A+ Q++V+T+ E+KI
Sbjct: 127 EMKIRLQADFDNTRKKLDKDRLSTESNAKVQILKSLLPIIDSFEKAKLQVRVDTDKEKKI 186

Query: 232 NQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFL 291
           + SYQ IY+QF E+L  L V  + T+GKPFDPLLHEAI RE+S   + GII  E  KGF+
Sbjct: 187 DTSYQGIYRQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESEAVKAGIITEELNKGFV 246

Query: 292 LGERLLRPSMVKVSAGPGPEKSDEAA 318
           LG+R+LRP+ VKVS GP  +K+  AA
Sbjct: 247 LGDRVLRPAKVKVSLGPVNKKTPSAA 272

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g10790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8DJB3	1.5e-32	43.60	Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=grpE PE...	[more]
Q7UA77	5.6e-32	41.76	Protein GrpE OS=Synechococcus sp. (strain WH8102) OX=84588 GN=grpE PE=3 SV=1	[more]
B7KLH9	7.3e-32	41.38	Protein GrpE OS=Gloeothece citriformis (strain PCC 7424) OX=65393 GN=grpE PE=3 S...	[more]
Q3B0Y4	2.8e-31	42.26	Protein GrpE OS=Synechococcus sp. (strain CC9902) OX=316279 GN=grpE PE=3 SV=1	[more]
A3PA63	3.6e-31	41.57	Protein GrpE OS=Prochlorococcus marinus (strain MIT 9301) OX=167546 GN=grpE PE=3...	[more]

BLAST of Cp4.1LG10g10790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543468.1	4.29e-216	100.00	uncharacterized protein LOC111803344 [Cucurbita pepo subsp. pepo]	[more]
KAG6603429.1	3.92e-212	98.81	hypothetical protein SDJN03_04038, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022949866.1	1.12e-211	98.51	uncharacterized protein LOC111453132 [Cucurbita moschata]	[more]
XP_022967837.1	1.20e-206	96.13	uncharacterized protein LOC111467228 [Cucurbita maxima]	[more]
XP_022154525.1	5.84e-191	88.69	uncharacterized protein LOC111021782 isoform X1 [Momordica charantia]	[more]

BLAST of Cp4.1LG10g10790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GD85	5.44e-212	98.51	GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111453132 PE=3 SV=1	[more]
A0A6J1HRX1	5.80e-207	96.13	GrpE protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111467228 PE=3 SV=1	[more]
A0A6J1DJU6	2.83e-191	88.69	GrpE protein homolog OS=Momordica charantia OX=3673 GN=LOC111021782 PE=3 SV=1	[more]
A0A0A0L229	1.85e-182	86.61	GrpE protein homolog OS=Cucumis sativus OX=3659 GN=Csa_4G417510 PE=3 SV=1	[more]
A0A6J1HTM7	2.82e-182	86.39	GrpE protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111466047 PE=3 SV=1	[more]

BLAST of Cp4.1LG10g10790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17710.2	7.1e-83	57.27	Co-chaperone GrpE family protein	[more]
AT5G17710.1	9.3e-83	57.57	Co-chaperone GrpE family protein	[more]
AT1G36390.1	1.6e-45	45.63	Co-chaperone GrpE family protein	[more]
AT1G36390.2	1.6e-45	45.63	Co-chaperone GrpE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 66..86
None	No IPR available	COILS	Coil	Coil	coord: 146..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..329
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 303..336
None	No IPR available	PANTHER	PTHR21237:SF27	GRPE PROTEIN HOMOLOG	coord: 1..325
IPR000740	GrpE nucleotide exchange factor	PRINTS	PR00773	GRPEPROTEIN	coord: 258..273 score: 48.05 coord: 175..191 score: 48.53 coord: 285..304 score: 46.72 coord: 203..218 score: 41.99
IPR000740	GrpE nucleotide exchange factor	PFAM	PF01025	GrpE	coord: 148..305 e-value: 4.1E-43 score: 146.9
IPR000740	GrpE nucleotide exchange factor	PANTHER	PTHR21237	GRPE PROTEIN	coord: 1..325
IPR000740	GrpE nucleotide exchange factor	PROSITE	PS01071	GRPE	coord: 261..304
IPR000740	GrpE nucleotide exchange factor	HAMAP	MF_01151	GrpE	coord: 77..306 score: 17.893904
IPR000740	GrpE nucleotide exchange factor	CDD	cd00446	GrpE	coord: 171..304 e-value: 6.63799E-48 score: 156.127
IPR009012	GrpE nucleotide exchange factor, head	GENE3D	2.30.22.10	Head domain of nucleotide exchange factor GrpE	coord: 250..305 e-value: 4.7E-18 score: 66.9
IPR009012	GrpE nucleotide exchange factor, head	SUPERFAMILY	51064	Head domain of nucleotide exchange factor GrpE	coord: 252..307
IPR013805	GrpE nucleotide exchange factor, coiled-coil	GENE3D	3.90.20.20		coord: 138..247 e-value: 2.7E-22 score: 80.6
IPR013805	GrpE nucleotide exchange factor, coiled-coil	SUPERFAMILY	58014	Coiled-coil domain of nucleotide exchange factor GrpE	coord: 156..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g10790.1	Cp4.1LG10g10790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0001405	PAM complex, Tim23 associated import motor
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0051082	unfolded protein binding