Cp4.1LG10g09880 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGGTAGACAAAATTAATGTGATTCCAAAGAATGTCAGGTAAATGAGGTGGCAAAATTAGTAAGGATTATTTGGAGTCCTCATGGCTATTTTCCTCTTTTCCCCAACCTCATTATATTTTATTGTAATTCACCATTTTTCATACACCTATATAAACCCTCTCTCTGCTGCTTCTTTCCATCAGCTTGCTCTCTTGCCTCTCTCTGTCTCTCAGTATTTTAGTTTCTTCTAAGCTTAATTCTCTTCTTCACTTCCCTATTGCTTCTTCTTCCCTTTACCAAATGGCCACCATTGAGGTAATTTCAAGCTTTTATAGCTTTCTTTCATGGCTTTAAGATCTTTTTTCTTGTTTTTCTTTTGATATTCTAACAATGGCTGTATGAGTGTGATCATGTTGTTACTGATTTAATGATCTGTGGGTATTGGATCACATTCTCATATGAATATGATCATTGAAGGCTGTTTTAACATATTGTGTTTGAATGGCAATCCATAATGAATTGTGCGATCTGGGTGTGGCAGGTTGAATCAGCCCCCGTTGTATTGGCAGAGCCTGAGGCAGCTCCAGTGGTCCAAGCTGAGGAGAAAGTTGTAGAGGAGCCGGTGAGTGAAGCAGCCCCTGCAGAAGAGCCAAAGGAGGAGGAAGCTGCCTCTGAAGCTGTTGAGACAGAGGAACCAGCACCGGTCGCAGCCGAACCCGAGGTCGAAACCAAGGAAGTTGTGGTAGAGGAGGCAGCCGAGGCAGTGGAGGCAGAGCCTGCAGCTCCTGCTGCTGCTGCTTCCGAGCCCGAAGCACCGGCCGGGGCGGAAGAGAAGAAGGAAGAGACCAAAGAGGAAACAGAAGAGCCAGTGGTAGAGAAAAAAGAAGAAGAAGAAGAACCTCAGGAAGTGAAGGCTGAGGACACTGTTGAAGAGAGCTCAGAAGCAGCAGCAGCAGCAGCACCAGCTCCAGCTGAGGAAGAGAAGCCAAAGGAAGAGGAATAAGGAGACAAGGCAATGGAGAAAGGTGGGCTTAAAAGTTAGTTTTATTTGGTGTCACAGTGTTTGTTTTATGAATTAAAACACAGAGTTGGAATTTAAGGTTGCAAATATGGGATATGAAGCTCAGTCCCAGTAGAGTCGTTTCATTTGATAGTCTGTGTGGTTGGGATATGTTGTTCTCTAGCTTTGAATAAAATCATATTTAAATCTTTTTTGGTGTTCTAAACTATCCTTCCCTCACAACATAACATAGTTTCCTTTGTTTCTTTTCTCTTTTATTCAACAACCAATCTAAATACACTTCAAATTGGTCAAACATTCATTCAACTCAACATATATAAATTAAATCAATGCTTACTAAACTAAATATTGGAAGATTTCTATTAAGGGACGGTTTCCTAGACATAAACCTAAAATTCCAACCCTAAATTAAATGAACAAAAGGACCAAACTTTTATCAAATTTCTCTATGTCATGAGATCCCACATTGGTTAGAGA GAGGTAGACAAAATTAATGTGATTCCAAAGAATGTCAGGTAAATGAGGTGGCAAAATTAGTAAGGATTATTTGGAGTCCTCATGGCTATTTTCCTCTTTTCCCCAACCTCATTATATTTTATTGTAATTCACCATTTTTCATACACCTATATAAACCCTCTCTCTGCTGCTTCTTTCCATCAGCTTGCTCTCTTGCCTCTCTCTGTCTCTCAGTATTTTAGTTTCTTCTAAGCTTAATTCTCTTCTTCACTTCCCTATTGCTTCTTCTTCCCTTTACCAAATGGCCACCATTGAGGTTGAATCAGCCCCCGTTGTATTGGCAGAGCCTGAGGCAGCTCCAGTGGTCCAAGCTGAGGAGAAAGTTGTAGAGGAGCCGGTGAGTGAAGCAGCCCCTGCAGAAGAGCCAAAGGAGGAGGAAGCTGCCTCTGAAGCTGTTGAGACAGAGGAACCAGCACCGGTCGCAGCCGAACCCGAGGTCGAAACCAAGGAAGTTGTGGTAGAGGAGGCAGCCGAGGCAGTGGAGGCAGAGCCTGCAGCTCCTGCTGCTGCTGCTTCCGAGCCCGAAGCACCGGCCGGGGCGGAAGAGAAGAAGGAAGAGACCAAAGAGGAAACAGAAGAGCCAGTGGTAGAGAAAAAAGAAGAAGAAGAAGAACCTCAGGAAGTGAAGGCTGAGGACACTGTTGAAGAGAGCTCAGAAGCAGCAGCAGCAGCAGCACCAGCTCCAGCTGAGGAAGAGAAGCCAAAGGAAGAGGAATAAGGAGACAAGGCAATGGAGAAAGGTGGGCTTAAAAGTTAGTTTTATTTGGTGTCACAGTGTTTGTTTTATGAATTAAAACACAGAGTTGGAATTTAAGGTTGCAAATATGGGATATGAAGCTCAGTCCCAGTAGAGTCGTTTCATTTGATAGTCTGTGTGGTTGGGATATGTTGTTCTCTAGCTTTGAATAAAATCATATTTAAATCTTTTTTGGTGTTCTAAACTATCCTTCCCTCACAACATAACATAGTTTCCTTTGTTTCTTTTCTCTTTTATTCAACAACCAATCTAAATACACTTCAAATTGGTCAAACATTCATTCAACTCAACATATATAAATTAAATCAATGCTTACTAAACTAAATATTGGAAGATTTCTATTAAGGGACGGTTTCCTAGACATAAACCTAAAATTCCAACCCTAAATTAAATGAACAAAAGGACCAAACTTTTATCAAATTTCTCTATGTCATGAGATCCCACATTGGTTAGAGA ATGGCCACCATTGAGGTTGAATCAGCCCCCGTTGTATTGGCAGAGCCTGAGGCAGCTCCAGTGGTCCAAGCTGAGGAGAAAGTTGTAGAGGAGCCGGTGAGTGAAGCAGCCCCTGCAGAAGAGCCAAAGGAGGAGGAAGCTGCCTCTGAAGCTGTTGAGACAGAGGAACCAGCACCGGTCGCAGCCGAACCCGAGGTCGAAACCAAGGAAGTTGTGGTAGAGGAGGCAGCCGAGGCAGTGGAGGCAGAGCCTGCAGCTCCTGCTGCTGCTGCTTCCGAGCCCGAAGCACCGGCCGGGGCGGAAGAGAAGAAGGAAGAGACCAAAGAGGAAACAGAAGAGCCAGTGGTAGAGAAAAAAGAAGAAGAAGAAGAACCTCAGGAAGTGAAGGCTGAGGACACTGTTGAAGAGAGCTCAGAAGCAGCAGCAGCAGCAGCACCAGCTCCAGCTGAGGAAGAGAAGCCAAAGGAAGAGGAATAA MATIEVESAPVVLAEPEAAPVVQAEEKVVEEPVSEAAPAEEPKEEEAASEAVETEEPAPVAAEPEVETKEVVVEEAAEAVEAEPAAPAAAASEPEAPAGAEEKKEETKEETEEPVVEKKEEEEEPQEVKAEDTVEESSEAAAAAAPAPAEEEKPKEEE Homology
BLAST of Cp4.1LG10g09880 vs. NCBI nr
Match: XP_023544677.1 (uncharacterized protein LOC111804190 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023544678.1 uncharacterized protein LOC111804190 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 232 bits (592), Expect = 1.58e-75 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
BLAST of Cp4.1LG10g09880 vs. NCBI nr
Match: KAG6603817.1 (hypothetical protein SDJN03_04426, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033998.1 hypothetical protein SDJN02_03724 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 191 bits (486), Expect = 1.89e-59 Identity = 146/159 (91.82%), Postives = 147/159 (92.45%), Query Frame = 0
BLAST of Cp4.1LG10g09880 vs. NCBI nr
Match: XP_022950569.1 (major latex allergen Hev b 5-like [Cucurbita moschata]) HSP 1 Score: 191 bits (485), Expect = 2.77e-59 Identity = 146/160 (91.25%), Postives = 147/160 (91.88%), Query Frame = 0
BLAST of Cp4.1LG10g09880 vs. NCBI nr
Match: XP_022979119.1 (major latex allergen Hev b 5-like [Cucurbita maxima]) HSP 1 Score: 190 bits (482), Expect = 7.67e-59 Identity = 144/159 (90.57%), Postives = 145/159 (91.19%), Query Frame = 0
BLAST of Cp4.1LG10g09880 vs. NCBI nr
Match: XP_038880819.1 (probable serine/threonine-protein kinase kinX [Benincasa hispida]) HSP 1 Score: 135 bits (339), Expect = 2.92e-37 Identity = 115/158 (72.78%), Postives = 123/158 (77.85%), Query Frame = 0
BLAST of Cp4.1LG10g09880 vs. ExPASy TrEMBL
Match: A0A6J1GG70 (major latex allergen Hev b 5-like OS=Cucurbita moschata OX=3662 GN=LOC111453630 PE=4 SV=1) HSP 1 Score: 191 bits (485), Expect = 1.34e-59 Identity = 146/160 (91.25%), Postives = 147/160 (91.88%), Query Frame = 0
BLAST of Cp4.1LG10g09880 vs. ExPASy TrEMBL
Match: A0A6J1IVT4 (major latex allergen Hev b 5-like OS=Cucurbita maxima OX=3661 GN=LOC111478851 PE=4 SV=1) HSP 1 Score: 190 bits (482), Expect = 3.71e-59 Identity = 144/159 (90.57%), Postives = 145/159 (91.19%), Query Frame = 0
BLAST of Cp4.1LG10g09880 vs. ExPASy TrEMBL
Match: A0A0A0KMX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511710 PE=4 SV=1) HSP 1 Score: 114 bits (285), Expect = 2.34e-29 Identity = 108/161 (67.08%), Postives = 118/161 (73.29%), Query Frame = 0
BLAST of Cp4.1LG10g09880 vs. ExPASy TrEMBL
Match: A0A5D3CMF4 (Fibrous sheath CABYR-binding protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005990 PE=4 SV=1) HSP 1 Score: 112 bits (281), Expect = 9.41e-29 Identity = 107/161 (66.46%), Postives = 117/161 (72.67%), Query Frame = 0
BLAST of Cp4.1LG10g09880 vs. ExPASy TrEMBL
Match: A0A1S3B0W0 (fibrous sheath CABYR-binding protein-like OS=Cucumis melo OX=3656 GN=LOC103484659 PE=4 SV=1) HSP 1 Score: 109 bits (272), Expect = 1.97e-27 Identity = 106/161 (65.84%), Postives = 116/161 (72.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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