Cp4.1LG10g09480 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTAGTGTTCATATCTCTCTTTCTGTACAGTATAAAGACAACTTTCTTCGCAACAGATTAAAAACAAATTGTGCAATAAATAGTCACGCGCTCTATTATTATATTCTCCTCCTCCTCCTCCTCCTCCTCCTTGATTCTCTTTACCACTGTCCAAATAAAACCCTAGATTTCTACTTTTTGTGTTCTAATGGCGGATTTGGAGAATCAGGATAGGGGGCTTGGGAATGTTGTTGTTGGAGAAGAGGAGGAGAAGCTTCTCGAGGGGGTTACGTTAGTGGATTTCGATATGTTGTGTTCTACGGTGGCTATGCAGACGCAGGGTAAATGGGCGAAGTTGGAGACTACTCGAGATGCTTCTATGGAACCCGATTTGGGGGGAGTTTTTAGGATGTGGGAAGGTGAACTACTCGATTGCTTCGATGACCGTCGTATCGCTATCGAATCCACATGGTTAGACTTGTTAATCCACTTTTTCTTCTCTACTTTCAGCTTTTTCAGGGATTTTGTTTTCTCTCTCTCTCTATCTCTGTTGTTCATTGAGAAATTTGTCGATCGAGCGAGGGATTTTTTTCCTCTTAGGGCGAGGAGATTGGTTGCTTGGAAAAGAAATAGAAAAAAGGTTTTGACCATGATATTATCTGTTATTAGTTGGAATATGTCTTTCAGGCCTCAGCTTGTGATTCTAAAAAAGTTAAATCAATAGTTTCTGTGCACAATTTTTCCTCGTGGTCTCCGAGTACCTGTGGTTGGTTGTCATTATCCAACAGGGGATGTGGATCTTGCCCTGCTTAAGTTCGAACCTGTAATTATGATTGATAATTGTCTATGAATGGAATATTTACGATATGTACGACTTTTTTACTACATCGAAGTAATTGGTTTTCACCCCAAGTATTCTCATAGCTTGTATTAATGATGCAGCTGGCCGTGTCACAGATTTGGGAAGAACATGGGAAGGGCTGGTTTTGGCTCTTGTTTTCTTCAGGTAAACTTTTTCTTGGCTTCTTGAAGCAAACAATTTCCGGGTAGCAAACATTCTCGAAGGAGAGGGGAAGAACTTAGAGTACAGATTACACTTGTCTTTGCTCATCAAATTTTCGTAATGGATGGTATACAATTTGCCATAATTTTGAAACCATTTGCAGGGAACGGTTTATTTATCTCTTGCTCTCGGTGCCCTGTGCAACTTCATTGCCTTTTTGGTCACAAAACGCCATTACTTTTTATATCCAGCCATTGCTTTCACCATTTCAGCAGTTACATATTTGGGGTTCTTCCGAACCCAGATGAGGAGGAAATTCAATATAAGGGTGAGACTTCTTTTTCTATCAGCCCTTTTGCTGTTATCTGTTTCTTATTTCTACTTGATAATTAATGGATTCGTAACACATTCTATTTCAAGCATGCTGAAATTGTACTCTAAATTTGTCTTTTGCCTTTCCTGATCAAGTTGTTTGTTTCCCCCCCTTTTTTTTTATCATCAAAGTTACTATTATTATTATATTTTTTAGGGTAAGAAACCTTACTTTTATTGAGAGTAAAGAACGAAAATACAAGGGCACAAAATAAAATCTCCAACAAAACACTAAGGGAGTCTGACTCTTAACTATGAAAGAAGATTCCAATGTAAAAGAACTAGACTAAGCTCATAACTGAAGAAAAGACCCAACGACCGACGTCCACAGGGAGGCGTTAAGTCTAGCCACCTCCCAAACTTACTAACCCGATCTCTCCACCTCATAAAAAAATGTATTATTCCTCTCAATTCAAATACTCCTCAAATATGCAAAGAAGCTAGCATGCTACGACCTTAATCCTTAGAATGGAGATGCAATAGAACCTCCTCCATGTGAGCCGTACCATCTCTATTCTAGACCAAATAGTACCGAACACTGCCAACCAACAGCTCCAAAGGAGGTGAGCTAACTTGCAAACTCAAAACCATTGATCCAGGTCCTCCTTATGCCTCATACAGAGAGTGCACCATTGAGAGAAGCATAGGAAGAGTGCCTTTGAATGCAATCCACGATAATGACTCTCCCATGTAAAATCTGCCACGGAAACACCTTAACTTTTTTAGAATTTTAACTTTCTAGAGAAGAAAAATCAAAGGCAACAATGAATGGAGAAGGAGAGGAAAAAATATGCAAAAGAAGAATCGAGGGACCAAATCCTAACGCCCCTTCTCTTGGAGTAGCATGCTGGTCTTGAAGAAGAGAAAAAATTCAAAGTTATAGTTGGTTTTGTTGGCGAATGGGTGTCTAATCATTGAACTATGCTCGNAAAAAAAAAAAAAAAAAAAAAAAGACTTCAAGTCAAAATAATTCCATTGTCTTCTTTTTTATTATTAGATTGGGTAAATGAGTTGATAGTCATAAGTAGCAAACGGAAATCCACGAAAATTCTAACGACTATTAGTATGTTTGGGATTAGTTTTTTTGTATCTTAGAACGTGTAATTGTGTGTAGGGAGAGACTAGTATGAGAAATATTACTAATAGTGTGGAGGGAGACTCCTACGACACAGTTTATTGATAATGTGCACGGGGAGACTAATAACATATAGTGTGTGTGAAAAAAGAGATTAATGAGAGAGTTCATATATGGATAACATGAGCAAGCTTGTAGTGGTTACGAATTAAATTTTCTGCGGGCGTTTTCTTAGTACTTATGTGTAGATTAATATTAATTTTATGATTTAGGGAGGAGATAATTCCTTGGATGATTGCATCTACCACCTGATCTGCCCCTGCTGCGCCTTATCTCAGGTCTGTCTATCAGTTTTTGCACATCAAAACCTTATATTCGTAGGTCATCACTGAAATACTGGTAAATGTGGAGCAGGAATCACGAACGCTGGAAATGAATAATGTCCAAGATGGCACATGGCACGGTCGAGGTGACACAATATGTATAGGTAGTTATGGTGAAGCCAGCCGATTTGTGGAGCTAAATCCACCTGATCCTGTGTCAACCAAATCTTCTGAAGCCTGTGGCATTTTAAAGGATGTGGCTAATCATGATCACTCTTGAGTCTATGCGTGCATGTAGCAAGACGTCGGTTGCTCTGCCTAGGACATGCTTTCGGGATTCTTCGTCTGATTCATTGCCGAAGGTACACGGCACACATGCCTTGTTTCAGCAACTTTGCCCTCAAGGGATGAGGGTTCAGAAATTTGAGGTGCTACTGTTGCTGCTTTACTTTTGGTGTGTTGCCCTCCAGAACTGGTTGGGCTGCGGTTGGTGCAATGGGGTATGGTTTGTGAACCTCGATATTAGAGGTTGGGGGGTTGAAAATGACTCCTCTCTTTTTTTTTTTTCCTTCTTTTCTTTTCTTGTGTAAACACACATGATAGTGTTCAGATCGATACAAGAACTCTTCTAAATTGTATATACCATACCAAAATTTTATGTATGGAGTGGTGTGAGTTAATAATCTTGAGTTACGATTTTTTTTTTTTTTTTTCACTATTGTAAGATAATTGTTTAGGAAATCGTTATCTTTAATTAGGAAGATTTGTCATAGTTGCTTGGATCCGTTCCGTTGTACTATAAATACTTATGTATGTGTTTTCACAGTAATAAGTATACGTGCTTAAGTTCTTAAATTCAAAAGTCATCTCCCCTAAATTGTTTTTTCACTTTCGTTATTTGTTTCCACCTATTTTGATGGTGGATCATTTCCAACAAATGTGGGCTGTTT TATTAGTGTTCATATCTCTCTTTCTGTACAGTATAAAGACAACTTTCTTCGCAACAGATTAAAAACAAATTGTGCAATAAATAGTCACGCGCTCTATTATTATATTCTCCTCCTCCTCCTCCTCCTCCTCCTTGATTCTCTTTACCACTGTCCAAATAAAACCCTAGATTTCTACTTTTTGTGTTCTAATGGCGGATTTGGAGAATCAGGATAGGGGGCTTGGGAATGTTGTTGTTGGAGAAGAGGAGGAGAAGCTTCTCGAGGGGGTTACGTTAGTGGATTTCGATATGTTGTGTTCTACGGTGGCTATGCAGACGCAGGGTAAATGGGCGAAGTTGGAGACTACTCGAGATGCTTCTATGGAACCCGATTTGGGGGGAGTTTTTAGGATGTGGGAAGGTGAACTACTCGATTGCTTCGATGACCGTCGTATCGCTATCGAATCCACATGCTGGCCGTGTCACAGATTTGGGAAGAACATGGGAAGGGCTGGTTTTGGCTCTTGTTTTCTTCAGGGAACGGTTTATTTATCTCTTGCTCTCGGTGCCCTGTGCAACTTCATTGCCTTTTTGGTCACAAAACGCCATTACTTTTTATATCCAGCCATTGCTTTCACCATTTCAGCAGTTACATATTTGGGGTTCTTCCGAACCCAGATGAGGAGGAAATTCAATATAAGGGGAGGAGATAATTCCTTGGATGATTGCATCTACCACCTGATCTGCCCCTGCTGCGCCTTATCTCAGGAATCACGAACGCTGGAAATGAATAATGTCCAAGATGGCACATGGCACGGTCGAGGTGACACAATATGTATAGGTAGTTATGGTGAAGCCAGCCGATTTGTGGAGCTAAATCCACCTGATCCTGTGTCAACCAAATCTTCTGAAGCCTGTGGCATTTTAAAGGATGTGGCTAATCATGATCACTCTTGAGTCTATGCGTGCATGTAGCAAGACGTCGGTTGCTCTGCCTAGGACATGCTTTCGGGATTCTTCGTCTGATTCATTGCCGAAGGTACACGGCACACATGCCTTGTTTCAGCAACTTTGCCCTCAAGGGATGAGGGTTCAGAAATTTGAGGTGCTACTGTTGCTGCTTTACTTTTGGTGTGTTGCCCTCCAGAACTGGTTGGGCTGCGGTTGGTGCAATGGGGTATGGTTTGTGAACCTCGATATTAGAGGTTGGGGGGTTGAAAATGACTCCTCTCTTTTTTTTTTTTCCTTCTTTTCTTTTCTTGTGTAAACACACATGATAGTGTTCAGATCGATACAAGAACTCTTCTAAATTGTATATACCATACCAAAATTTTATGTATGGAGTGGTGTGAGTTAATAATCTTGAGTTACGATTTTTTTTTTTTTTTTTCACTATTGTAAGATAATTGTTTAGGAAATCGTTATCTTTAATTAGGAAGATTTGTCATAGTTGCTTGGATCCGTTCCGTTGTACTATAAATACTTATGTATGTGTTTTCACAGTAATAAGTATACGTGCTTAAGTTCTTAAATTCAAAAGTCATCTCCCCTAAATTGTTTTTTCACTTTCGTTATTTGTTTCCACCTATTTTGATGGTGGATCATTTCCAACAAATGTGGGCTGTTT ATGGCGGATTTGGAGAATCAGGATAGGGGGCTTGGGAATGTTGTTGTTGGAGAAGAGGAGGAGAAGCTTCTCGAGGGGGTTACGTTAGTGGATTTCGATATGTTGTGTTCTACGGTGGCTATGCAGACGCAGGGTAAATGGGCGAAGTTGGAGACTACTCGAGATGCTTCTATGGAACCCGATTTGGGGGGAGTTTTTAGGATGTGGGAAGGTGAACTACTCGATTGCTTCGATGACCGTCGTATCGCTATCGAATCCACATGCTGGCCGTGTCACAGATTTGGGAAGAACATGGGAAGGGCTGGTTTTGGCTCTTGTTTTCTTCAGGGAACGGTTTATTTATCTCTTGCTCTCGGTGCCCTGTGCAACTTCATTGCCTTTTTGGTCACAAAACGCCATTACTTTTTATATCCAGCCATTGCTTTCACCATTTCAGCAGTTACATATTTGGGGTTCTTCCGAACCCAGATGAGGAGGAAATTCAATATAAGGGGAGGAGATAATTCCTTGGATGATTGCATCTACCACCTGATCTGCCCCTGCTGCGCCTTATCTCAGGAATCACGAACGCTGGAAATGAATAATGTCCAAGATGGCACATGGCACGGTCGAGGTGACACAATATGTATAGGTAGTTATGGTGAAGCCAGCCGATTTGTGGAGCTAAATCCACCTGATCCTGTGTCAACCAAATCTTCTGAAGCCTGTGGCATTTTAAAGGATGTGGCTAATCATGATCACTCTTGA MADLENQDRGLGNVVVGEEEEKLLEGVTLVDFDMLCSTVAMQTQGKWAKLETTRDASMEPDLGGVFRMWEGELLDCFDDRRIAIESTCWPCHRFGKNMGRAGFGSCFLQGTVYLSLALGALCNFIAFLVTKRHYFLYPAIAFTISAVTYLGFFRTQMRRKFNIRGGDNSLDDCIYHLICPCCALSQESRTLEMNNVQDGTWHGRGDTICIGSYGEASRFVELNPPDPVSTKSSEACGILKDVANHDHS Homology
BLAST of Cp4.1LG10g09480 vs. ExPASy Swiss-Prot
Match: Q9M815 (Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana OX=3702 GN=PCR8 PE=1 SV=2) HSP 1 Score: 62.4 bits (150), Expect = 8.4e-09 Identity = 46/142 (32.39%), Postives = 66/142 (46.48%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. ExPASy Swiss-Prot
Match: Q3EBY6 (Protein MID1-COMPLEMENTING ACTIVITY 2 OS=Arabidopsis thaliana OX=3702 GN=MCA2 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.0e-06 Identity = 40/159 (25.16%), Postives = 65/159 (40.88%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. ExPASy Swiss-Prot
Match: P0CW97 (Protein PLANT CADMIUM RESISTANCE 3 OS=Arabidopsis thaliana OX=3702 GN=PCR3 PE=3 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05 Identity = 36/126 (28.57%), Postives = 52/126 (41.27%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. ExPASy Swiss-Prot
Match: B6SJQ0 (Cell number regulator 13 OS=Zea mays OX=4577 GN=CNR13 PE=2 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 5.6e-05 Identity = 34/125 (27.20%), Postives = 53/125 (42.40%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. NCBI nr
Match: XP_023544493.1 (uncharacterized protein LOC111804053 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 518 bits (1333), Expect = 1.62e-185 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. NCBI nr
Match: XP_022950802.1 (protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita moschata]) HSP 1 Score: 511 bits (1317), Expect = 4.46e-183 Identity = 245/248 (98.79%), Postives = 245/248 (98.79%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. NCBI nr
Match: XP_022977367.1 (protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita maxima]) HSP 1 Score: 508 bits (1308), Expect = 1.05e-181 Identity = 244/248 (98.39%), Postives = 244/248 (98.39%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. NCBI nr
Match: KAG6603734.1 (Protein PLANT CADMIUM RESISTANCE 8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 506 bits (1303), Expect = 6.09e-181 Identity = 243/248 (97.98%), Postives = 243/248 (97.98%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. NCBI nr
Match: XP_038883663.1 (protein PLANT CADMIUM RESISTANCE 11 [Benincasa hispida]) HSP 1 Score: 454 bits (1167), Expect = 3.42e-160 Identity = 218/249 (87.55%), Postives = 229/249 (91.97%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. ExPASy TrEMBL
Match: A0A6J1GFW1 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111453800 PE=4 SV=1) HSP 1 Score: 511 bits (1317), Expect = 2.16e-183 Identity = 245/248 (98.79%), Postives = 245/248 (98.79%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. ExPASy TrEMBL
Match: A0A6J1II90 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita maxima OX=3661 GN=LOC111477715 PE=4 SV=1) HSP 1 Score: 508 bits (1308), Expect = 5.09e-182 Identity = 244/248 (98.39%), Postives = 244/248 (98.39%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. ExPASy TrEMBL
Match: A0A1S3AZI4 (uncharacterized protein LOC103484568 OS=Cucumis melo OX=3656 GN=LOC103484568 PE=4 SV=1) HSP 1 Score: 445 bits (1144), Expect = 5.30e-157 Identity = 215/249 (86.35%), Postives = 225/249 (90.36%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. ExPASy TrEMBL
Match: A0A0A0KN60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516790 PE=4 SV=1) HSP 1 Score: 435 bits (1119), Expect = 3.54e-153 Identity = 210/250 (84.00%), Postives = 225/250 (90.00%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. ExPASy TrEMBL
Match: A0A6J1EIX8 (uncharacterized protein LOC111433749 OS=Cucurbita moschata OX=3662 GN=LOC111433749 PE=4 SV=1) HSP 1 Score: 429 bits (1103), Expect = 7.55e-151 Identity = 204/248 (82.26%), Postives = 221/248 (89.11%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. TAIR 10
Match: AT1G11380.1 (PLAC8 family protein ) HSP 1 Score: 289.3 bits (739), Expect = 3.0e-78 Identity = 146/251 (58.17%), Postives = 181/251 (72.11%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. TAIR 10
Match: AT1G52200.1 (PLAC8 family protein ) HSP 1 Score: 62.4 bits (150), Expect = 6.0e-10 Identity = 46/142 (32.39%), Postives = 66/142 (46.48%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. TAIR 10
Match: AT5G05350.1 (PLAC8 family protein ) HSP 1 Score: 58.2 bits (139), Expect = 1.1e-08 Identity = 40/132 (30.30%), Postives = 61/132 (46.21%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. TAIR 10
Match: AT2G17780.1 (PLAC8 family protein ) HSP 1 Score: 55.5 bits (132), Expect = 7.3e-08 Identity = 40/159 (25.16%), Postives = 65/159 (40.88%), Query Frame = 0
BLAST of Cp4.1LG10g09480 vs. TAIR 10
Match: AT2G17780.3 (PLAC8 family protein ) HSP 1 Score: 52.0 bits (123), Expect = 8.0e-07 Identity = 34/131 (25.95%), Postives = 57/131 (43.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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