Cp4.1LG10g09200 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCGGTTCAAGAAGCGACGACATCAGTGGCGCCACGTACTCTCCCAGGAGTTCTGGCCGTCCGATTCCGAAGCGGGGACAGGTCAAATTGGGGATTATGGTGGGTCTCGCCCACTCCGTTGCTTCCATTTTCTCGCCTACAACTCGCCGGAGCTAGACTCCACACCGGCCAGCGGCGGCTCACGGACTGAACCGCCCGGCCCGGCCCGCTTTTGGCAGGGAAATACCGGTTTTTGGTTTGTTTTGTAAAAATCAAGAGTTCTTTTTTTTTCTTTTTTCTTTTTTTAATTAATGGAAAATGAGATTTTCTTCTCTATTTATAATTTTGTGCTCTTCTTCTCTTAGTTTTAATCTTCTTTTTTTAGTATAATAAATATGGGATAAAGAATTTGTGACAACACATTAGCATATATCAACATTTATATTATATGGAATAAATGTCATGAAACATAAAAAATAAAATACAATAAAGTATTATTATACGAATAATTTAAAATATATATTTTTTAAAAATGATAAGAAATATAATTACATATTTTTAAATTTTAATTTTATACTAATACTTATAATACTAAAAGTAGACAAAACTCGTCGTAATTGACGTATACTATTTAAAGGTTCAAAAATATTAGCATTATAAATATTTTTTTGTCACGTTGTGATCGAGATATTATCAATTTTATTAATAAATGCACGAAGGAGATCGATAATTGAATTTATTAGAATTTTGAATTAAATTTACTCATAATAAAATTAATAATTTTGTGTTAATCAATATTAAAAAAAAAATTAAATTAAAAGGGGTAGGGATCCCACACATTTAAAAACCAAATCTATGTGTGTATATCTTATTTTTTAAATACAAGATCTGAAATATATTTATTTATTTATATATATAACAATACATTGAACCCAACAGCAGTTTATAAAATTTGGACACTAAGATTCAGTGTCTGGTTTTTGTCGTGTAATAATATAAATTAATTATTTGCAACTTGCTAATGTTTGTTTTTTATTATTGGCTTCAATTCCATCATTAAAAGCATAGGTTTATGTATCATTTTTTGGCCTTTTTCTTTTATCGATATTAGTGGGTGTGACATGCATTCCTTTAATTATAATGTTTTAATATGCCCTATTGCAAACTCGCTTTTACATTATTATAATAATAATTAAAATTATTATTATTATGATAGTGATACAACTTGGATAAGATTAAGTGAATCGGAGCACCACAAAAATGGACAAAACGGCACCGTTAGTGGCGGGGCAGCCTTTTAGCTAGTGGAGGCCATATGAGCACGTTTTTTTTTTCTTTTTTTAATTTTTTTCCTACCAGATTTTTCATGTGATAAATGATTTCATTTTTTTTATTACGTTTAATGCCACATCATCAGATTCTCAATGTGAAAACTCTAAATTACCCTTCACTCCTTACGCAAGTCTTTCTGATGCCACGTCACTACTCACCTTTTACTATTCAATTCCTTGCGGTTCAAGGGTTCGAGTCAAAGGTTCAGCCTAATTACAATTTTTTTTTTAAAATAAAAGCTTGATGGTCAAGTAAACGCTTAAATTTGAATTTTTGTTCAAAGTCAAAATATTATTATTATTATTATTTTATTGTTATCTATGGATTTGACAGCTGGCATCACTGGCTGTGGGTATACCAAAGAGAAAAGGTCAAATTGGTAAATTAGGCTTAAGTTTGATTGATTTTGAAAATTTTGAGAAGAAGAAAGCAAGACGTCAGTTAGGCAGGCAGGGTCTAAATCGTCAATTTCCACTGGGGGGGCATTTCCGTCATTTTGCCTTCTGGTTTTGTGTATATATATATATGTATATGTATAGCCGATTCGAAGCATAACAAGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTGTGTAAATCAGAAACTTCAGGTACAGAGATGGCCGGAAGCAGAATCAAGGCGATCAACGGTGGAGATTTGTCGAGGAAGTATTCTGACCGTTTGATACCAAAAAGGGGACAGGTGACAATGGGGATTCTGGCGGGAATTGCTCACTCCGTGACTTCGATGTTCTCTCACGGCGGTCGGAAATGA ATGGGCGGTTCAAGAAGCGACGACATCAGTGGCGCCACGTACTCTCCCAGGAGTTCTGGCCGTCCGATTCCGAAGCGGGGACAGGTCAAATTGGGGATTATGCTGGCATCACTGGCTGTGGGTATACCAAAGAGAAAAGGTCAAATTGGTAAATTAGGCTTAAGTTTGATTGATTTTGAAAATTTTGAGAAGAAGAAAGCAAGACAAACTTCAGGTACAGAGATGGCCGGAAGCAGAATCAAGGCGATCAACGGTGGAGATTTGTCGAGGAAGTATTCTGACCGTTTGATACCAAAAAGGGGACAGGTGACAATGGGGATTCTGGCGGGAATTGCTCACTCCGTGACTTCGATGTTCTCTCACGGCGGTCGGAAATGA ATGGGCGGTTCAAGAAGCGACGACATCAGTGGCGCCACGTACTCTCCCAGGAGTTCTGGCCGTCCGATTCCGAAGCGGGGACAGGTCAAATTGGGGATTATGCTGGCATCACTGGCTGTGGGTATACCAAAGAGAAAAGGTCAAATTGGTAAATTAGGCTTAAGTTTGATTGATTTTGAAAATTTTGAGAAGAAGAAAGCAAGACAAACTTCAGGTACAGAGATGGCCGGAAGCAGAATCAAGGCGATCAACGGTGGAGATTTGTCGAGGAAGTATTCTGACCGTTTGATACCAAAAAGGGGACAGGTGACAATGGGGATTCTGGCGGGAATTGCTCACTCCGTGACTTCGATGTTCTCTCACGGCGGTCGGAAATGA MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIMLASLAVGIPKRKGQIGKLGLSLIDFENFEKKKARQTSGTEMAGSRIKAINGGDLSRKYSDRLIPKRGQVTMGILAGIAHSVTSMFSHGGRK Homology
BLAST of Cp4.1LG10g09200 vs. NCBI nr
Match: KAG6603714.1 (hypothetical protein SDJN03_04323, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 207 bits (526), Expect = 2.81e-66 Identity = 114/148 (77.03%), Postives = 118/148 (79.73%), Query Frame = 0
BLAST of Cp4.1LG10g09200 vs. NCBI nr
Match: KAF9672289.1 (hypothetical protein SADUNF_Sadunf11G0025900 [Salix dunnii]) HSP 1 Score: 79.3 bits (194), Expect = 4.42e-16 Identity = 51/117 (43.59%), Postives = 68/117 (58.12%), Query Frame = 0
BLAST of Cp4.1LG10g09200 vs. NCBI nr
Match: KAG6776984.1 (hypothetical protein POTOM_016781 [Populus tomentosa]) HSP 1 Score: 73.9 bits (180), Expect = 4.48e-14 Identity = 50/121 (41.32%), Postives = 66/121 (54.55%), Query Frame = 0
BLAST of Cp4.1LG10g09200 vs. NCBI nr
Match: XP_022977341.1 (uncharacterized protein LOC111477692 [Cucurbita maxima]) HSP 1 Score: 70.9 bits (172), Expect = 1.42e-12 Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 0
BLAST of Cp4.1LG10g09200 vs. NCBI nr
Match: KAG5622653.1 (hypothetical protein H5410_007871 [Solanum commersonii]) HSP 1 Score: 66.2 bits (160), Expect = 5.42e-11 Identity = 51/126 (40.48%), Postives = 72/126 (57.14%), Query Frame = 0
BLAST of Cp4.1LG10g09200 vs. ExPASy TrEMBL
Match: A0A0A0KLE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517000 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.92e-18 Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 0
BLAST of Cp4.1LG10g09200 vs. ExPASy TrEMBL
Match: A0A6N2L7Q2 (Uncharacterized protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS151409 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.17e-15 Identity = 52/124 (41.94%), Postives = 71/124 (57.26%), Query Frame = 0
BLAST of Cp4.1LG10g09200 vs. ExPASy TrEMBL
Match: A0A6N2KH53 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS78000 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 4.73e-13 Identity = 49/121 (40.50%), Postives = 65/121 (53.72%), Query Frame = 0
BLAST of Cp4.1LG10g09200 vs. ExPASy TrEMBL
Match: A0A6J1IJM3 (uncharacterized protein LOC111477692 OS=Cucurbita maxima OX=3661 GN=LOC111477692 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 6.85e-13 Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 0
BLAST of Cp4.1LG10g09200 vs. ExPASy TrEMBL
Match: F6GYY0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00060 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 7.62e-12 Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|