Cp4.1LG10g09200 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG10g09200
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG10: 4705506 .. 4707599 (-)
RNA-Seq ExpressionCp4.1LG10g09200
SyntenyCp4.1LG10g09200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGGTTCAAGAAGCGACGACATCAGTGGCGCCACGTACTCTCCCAGGAGTTCTGGCCGTCCGATTCCGAAGCGGGGACAGGTCAAATTGGGGATTATGGTGGGTCTCGCCCACTCCGTTGCTTCCATTTTCTCGCCTACAACTCGCCGGAGCTAGACTCCACACCGGCCAGCGGCGGCTCACGGACTGAACCGCCCGGCCCGGCCCGCTTTTGGCAGGGAAATACCGGTTTTTGGTTTGTTTTGTAAAAATCAAGAGTTCTTTTTTTTTCTTTTTTCTTTTTTTAATTAATGGAAAATGAGATTTTCTTCTCTATTTATAATTTTGTGCTCTTCTTCTCTTAGTTTTAATCTTCTTTTTTTAGTATAATAAATATGGGATAAAGAATTTGTGACAACACATTAGCATATATCAACATTTATATTATATGGAATAAATGTCATGAAACATAAAAAATAAAATACAATAAAGTATTATTATACGAATAATTTAAAATATATATTTTTTAAAAATGATAAGAAATATAATTACATATTTTTAAATTTTAATTTTATACTAATACTTATAATACTAAAAGTAGACAAAACTCGTCGTAATTGACGTATACTATTTAAAGGTTCAAAAATATTAGCATTATAAATATTTTTTTGTCACGTTGTGATCGAGATATTATCAATTTTATTAATAAATGCACGAAGGAGATCGATAATTGAATTTATTAGAATTTTGAATTAAATTTACTCATAATAAAATTAATAATTTTGTGTTAATCAATATTAAAAAAAAAATTAAATTAAAAGGGGTAGGGATCCCACACATTTAAAAACCAAATCTATGTGTGTATATCTTATTTTTTAAATACAAGATCTGAAATATATTTATTTATTTATATATATAACAATACATTGAACCCAACAGCAGTTTATAAAATTTGGACACTAAGATTCAGTGTCTGGTTTTTGTCGTGTAATAATATAAATTAATTATTTGCAACTTGCTAATGTTTGTTTTTTATTATTGGCTTCAATTCCATCATTAAAAGCATAGGTTTATGTATCATTTTTTGGCCTTTTTCTTTTATCGATATTAGTGGGTGTGACATGCATTCCTTTAATTATAATGTTTTAATATGCCCTATTGCAAACTCGCTTTTACATTATTATAATAATAATTAAAATTATTATTATTATGATAGTGATACAACTTGGATAAGATTAAGTGAATCGGAGCACCACAAAAATGGACAAAACGGCACCGTTAGTGGCGGGGCAGCCTTTTAGCTAGTGGAGGCCATATGAGCACGTTTTTTTTTTCTTTTTTTAATTTTTTTCCTACCAGATTTTTCATGTGATAAATGATTTCATTTTTTTTATTACGTTTAATGCCACATCATCAGATTCTCAATGTGAAAACTCTAAATTACCCTTCACTCCTTACGCAAGTCTTTCTGATGCCACGTCACTACTCACCTTTTACTATTCAATTCCTTGCGGTTCAAGGGTTCGAGTCAAAGGTTCAGCCTAATTACAATTTTTTTTTTAAAATAAAAGCTTGATGGTCAAGTAAACGCTTAAATTTGAATTTTTGTTCAAAGTCAAAATATTATTATTATTATTATTTTATTGTTATCTATGGATTTGACAGCTGGCATCACTGGCTGTGGGTATACCAAAGAGAAAAGGTCAAATTGGTAAATTAGGCTTAAGTTTGATTGATTTTGAAAATTTTGAGAAGAAGAAAGCAAGACGTCAGTTAGGCAGGCAGGGTCTAAATCGTCAATTTCCACTGGGGGGGCATTTCCGTCATTTTGCCTTCTGGTTTTGTGTATATATATATATGTATATGTATAGCCGATTCGAAGCATAACAAGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTGTGTAAATCAGAAACTTCAGGTACAGAGATGGCCGGAAGCAGAATCAAGGCGATCAACGGTGGAGATTTGTCGAGGAAGTATTCTGACCGTTTGATACCAAAAAGGGGACAGGTGACAATGGGGATTCTGGCGGGAATTGCTCACTCCGTGACTTCGATGTTCTCTCACGGCGGTCGGAAATGA

mRNA sequence

ATGGGCGGTTCAAGAAGCGACGACATCAGTGGCGCCACGTACTCTCCCAGGAGTTCTGGCCGTCCGATTCCGAAGCGGGGACAGGTCAAATTGGGGATTATGCTGGCATCACTGGCTGTGGGTATACCAAAGAGAAAAGGTCAAATTGGTAAATTAGGCTTAAGTTTGATTGATTTTGAAAATTTTGAGAAGAAGAAAGCAAGACAAACTTCAGGTACAGAGATGGCCGGAAGCAGAATCAAGGCGATCAACGGTGGAGATTTGTCGAGGAAGTATTCTGACCGTTTGATACCAAAAAGGGGACAGGTGACAATGGGGATTCTGGCGGGAATTGCTCACTCCGTGACTTCGATGTTCTCTCACGGCGGTCGGAAATGA

Coding sequence (CDS)

ATGGGCGGTTCAAGAAGCGACGACATCAGTGGCGCCACGTACTCTCCCAGGAGTTCTGGCCGTCCGATTCCGAAGCGGGGACAGGTCAAATTGGGGATTATGCTGGCATCACTGGCTGTGGGTATACCAAAGAGAAAAGGTCAAATTGGTAAATTAGGCTTAAGTTTGATTGATTTTGAAAATTTTGAGAAGAAGAAAGCAAGACAAACTTCAGGTACAGAGATGGCCGGAAGCAGAATCAAGGCGATCAACGGTGGAGATTTGTCGAGGAAGTATTCTGACCGTTTGATACCAAAAAGGGGACAGGTGACAATGGGGATTCTGGCGGGAATTGCTCACTCCGTGACTTCGATGTTCTCTCACGGCGGTCGGAAATGA

Protein sequence

MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIMLASLAVGIPKRKGQIGKLGLSLIDFENFEKKKARQTSGTEMAGSRIKAINGGDLSRKYSDRLIPKRGQVTMGILAGIAHSVTSMFSHGGRK
Homology
BLAST of Cp4.1LG10g09200 vs. NCBI nr
Match: KAG6603714.1 (hypothetical protein SDJN03_04323, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 207 bits (526), Expect = 2.81e-66
Identity = 114/148 (77.03%), Postives = 118/148 (79.73%), Query Frame = 0

Query: 1   MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIMLASLAVGIPKRKGQIGKLGLSLIDFE 60
           MGGSRSDDISGATYSPRSSGRPIPKRGQ      LASLAVG+PKRKGQIGKLGLSLIDFE
Sbjct: 1   MGGSRSDDISGATYSPRSSGRPIPKRGQ------LASLAVGVPKRKGQIGKLGLSLIDFE 60

Query: 61  NFEKKKARQ-----------------------TSGTEMAGSRIKAINGGDLSRKYSDRLI 120
           NFEKKKAR+                       TSGTEMAG+ IKAINGGDLSRKYSDRLI
Sbjct: 61  NFEKKKARRQLGKQGLNRQFPLGGISVILPSGTSGTEMAGNSIKAINGGDLSRKYSDRLI 120

Query: 121 PKRGQVTMGILAGIAHSVTSMFSHGGRK 125
           PKRGQVTMGILAGIAHSVTS+FSHGGRK
Sbjct: 121 PKRGQVTMGILAGIAHSVTSLFSHGGRK 142

BLAST of Cp4.1LG10g09200 vs. NCBI nr
Match: KAF9672289.1 (hypothetical protein SADUNF_Sadunf11G0025900 [Salix dunnii])

HSP 1 Score: 79.3 bits (194), Expect = 4.42e-16
Identity = 51/117 (43.59%), Postives = 68/117 (58.12%), Query Frame = 0

Query: 5   RSDDISGATYSPRSSGRPIPKRGQVKLGIMLASLAVGIPKRKGQIGKLGLSLIDFENFEK 64
           RS  I+G  +S R  GR IPKRGQVKLGI+L  LA  +        K G+ L   + F++
Sbjct: 6   RSVMINGGRHSQRVYGRLIPKRGQVKLGIVLG-LAHTVASIFSPRKKFGVQL---DLFQR 65

Query: 65  KKARQTSGTEMAGSRIKAINGGDLSRKYSDRLIPKRGQVTMGILAGIAHSVTSMFSH 121
           KK R   G      R+  +NGG +SR ++ R IPKRGQ+ + I+ G+AH   S FSH
Sbjct: 66  KKERTMEGAR----RLMILNGGKVSRGFASRPIPKRGQLKVAIVLGLAHCFASFFSH 114

BLAST of Cp4.1LG10g09200 vs. NCBI nr
Match: KAG6776984.1 (hypothetical protein POTOM_016781 [Populus tomentosa])

HSP 1 Score: 73.9 bits (180), Expect = 4.48e-14
Identity = 50/121 (41.32%), Postives = 66/121 (54.55%), Query Frame = 0

Query: 9   ISGATYSPRSSGRPIPKRGQVKLGIMLASLAVGIPKRKGQIGKLGLSLIDFENFEKKK-- 68
           I+G +YS R  GR IPKRGQVK+ I+L                 GL+      F  +K  
Sbjct: 7   INGVSYSQRFYGRMIPKRGQVKVAIVL-----------------GLAHTFASMFSPRKKC 66

Query: 69  -ARQTSGTEMAGSRIKAI-NGGDLSRKYSDRLIPKRGQVTMGILAGIAHSVTSMFSHGGR 125
            A + +  EMAG+R  AI +GG +SR +  R IPKRGQV + I+ G+AHS  S FSH   
Sbjct: 67  GAARLAHNEMAGARWPAIFSGGRVSRGFVSRPIPKRGQVKVAIVVGLAHSFASFFSHSAS 110

BLAST of Cp4.1LG10g09200 vs. NCBI nr
Match: XP_022977341.1 (uncharacterized protein LOC111477692 [Cucurbita maxima])

HSP 1 Score: 70.9 bits (172), Expect = 1.42e-12
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 0

Query: 1  MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIML 35
          MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIM+
Sbjct: 56 MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIMV 90

BLAST of Cp4.1LG10g09200 vs. NCBI nr
Match: KAG5622653.1 (hypothetical protein H5410_007871 [Solanum commersonii])

HSP 1 Score: 66.2 bits (160), Expect = 5.42e-11
Identity = 51/126 (40.48%), Postives = 72/126 (57.14%), Query Frame = 0

Query: 1   MGGSRSDDISGATYSPRSS-GRPIPKRGQVKLGIMLA---SLAVGIPKRKGQIGKLGLSL 60
           M G R + I+G   S R   GRPIPKRGQVK+ I+L    SL+     R+   G+    +
Sbjct: 1   MAGVRKEMINGGNISRREEYGRPIPKRGQVKVTIVLGLAHSLSSIFSNRRVAAGE---QI 60

Query: 61  IDFENFEKKKARQTSGTEMAGSRIKAINGGDLSRKYS-DRLIPKRGQVTMGILAGIAHSV 120
               +F   KA +    +M G R + INGG++ R     R IPKRGQV + I+ G+AHS+
Sbjct: 61  HQRSSFTVIKAHRRI-LKMPGVRKEMINGGNMLRSEEYGRPIPKRGQVKVTIVLGLAHSL 120

BLAST of Cp4.1LG10g09200 vs. ExPASy TrEMBL
Match: A0A0A0KLE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517000 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.92e-18
Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 0

Query: 75  MAGSRIKAINGGDLSRKYSDRLIPKRGQVTMGILAGIAHSVTSMFSHGGRK 125
           MAG+RI AIN G+LSRK SDRLIPKRGQV +GI+ GIAHSVTS+FSHG RK
Sbjct: 1   MAGTRINAINHGNLSRKCSDRLIPKRGQVKLGIIVGIAHSVTSIFSHGSRK 51

BLAST of Cp4.1LG10g09200 vs. ExPASy TrEMBL
Match: A0A6N2L7Q2 (Uncharacterized protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS151409 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.17e-15
Identity = 52/124 (41.94%), Postives = 71/124 (57.26%), Query Frame = 0

Query: 3   GSRSDDISGATYSPRSSGRPIPKRGQVKLGIMLASL----AVGIPKRKGQIGKLGLSLID 62
           G RS  ISG +YS R  GR IPKRGQVK+ I++       ++  P +K    +    LI 
Sbjct: 56  GGRSVMISGVSYSQRFYGRLIPKRGQVKVAIVMGLAHTFASMFSPCKKCGAAQRATRLIS 115

Query: 63  FENFEKKKARQTSGTEMAGSR-IKAINGGDLSRKYSDRLIPKRGQVTMGILAGIAHSVTS 121
            E  +K+       +EMAG+R +   NGG   R ++ R IPKRGQV + I  G+AHS +S
Sbjct: 116 LEETKKE-------SEMAGARWLTIFNGGKFYRGFASRPIPKRGQVKVAIAVGLAHSFSS 172

BLAST of Cp4.1LG10g09200 vs. ExPASy TrEMBL
Match: A0A6N2KH53 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS78000 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.73e-13
Identity = 49/121 (40.50%), Postives = 65/121 (53.72%), Query Frame = 0

Query: 5   RSDDISGATYSPRSSGRPIPKRGQVKLGIMLASL----AVGIPKRKGQIGKLGLSLIDFE 64
           RS  I+G ++  R  GR IPKRGQVK+ I+L       ++  P++K +     LS    E
Sbjct: 6   RSVMINGGSHPQRVYGRLIPKRGQVKVAIVLGLAHTVASIFSPRKKYERKVRSLS----E 65

Query: 65  NFEKKKARQTSGTEMAGSRIKAINGGDLSRKYSDRLIPKRGQVTMGILAGIAHSVTSMFS 121
              KKK R   G      R+   NGG +SR +  R IPKRGQ+ + I+ G AHS  S FS
Sbjct: 66  KGRKKKERTMEGAR----RLMIDNGGKVSRGFVSRPIPKRGQLKVAIVLGFAHSFASFFS 118

BLAST of Cp4.1LG10g09200 vs. ExPASy TrEMBL
Match: A0A6J1IJM3 (uncharacterized protein LOC111477692 OS=Cucurbita maxima OX=3661 GN=LOC111477692 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 6.85e-13
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 0

Query: 1  MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIML 35
          MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIM+
Sbjct: 56 MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIMV 90

BLAST of Cp4.1LG10g09200 vs. ExPASy TrEMBL
Match: F6GYY0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00060 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.62e-12
Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 0

Query: 75  MAGSRIKAINGGDLSRKYSDRLIPKRGQVTMGILAGIAHSVTSMFSHGGRK 125
           MAG R   INGG+ S+++S R IPKRGQV +GI+ G+AHSV S+FS GGR+
Sbjct: 1   MAGGRRAMINGGNFSQRFSGRPIPKRGQVKVGIVVGLAHSVASIFSLGGRR 51

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6603714.12.81e-6677.03hypothetical protein SDJN03_04323, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAF9672289.14.42e-1643.59hypothetical protein SADUNF_Sadunf11G0025900 [Salix dunnii][more]
KAG6776984.14.48e-1441.32hypothetical protein POTOM_016781 [Populus tomentosa][more]
XP_022977341.11.42e-1297.14uncharacterized protein LOC111477692 [Cucurbita maxima][more]
KAG5622653.15.42e-1140.48hypothetical protein H5410_007871 [Solanum commersonii][more]
Match NameE-valueIdentityDescription
A0A0A0KLE01.92e-1878.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517000 PE=4 SV=1[more]
A0A6N2L7Q21.17e-1541.94Uncharacterized protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS1514... [more]
A0A6N2KH534.73e-1340.50Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS78000 PE=4 SV=1[more]
A0A6J1IJM36.85e-1397.14uncharacterized protein LOC111477692 OS=Cucurbita maxima OX=3661 GN=LOC111477692... [more]
F6GYY07.62e-1260.78Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00060 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR36615PROTEIN, PUTATIVE-RELATEDcoord: 1..35
coord: 75..124

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g09200.1Cp4.1LG10g09200.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane