Cp4.1LG10g09120 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG10g09120
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionpentatricopeptide repeat-containing protein At2g37320
LocationCp4.1LG10: 4823019 .. 4824942 (+)
RNA-Seq ExpressionCp4.1LG10g09120
SyntenyCp4.1LG10g09120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGTTCGTCTTCTTCATACGCTCTTCGTGATATCTGAATCTTCTGCACTTCTTTGTAGGCATGGGTTCCATATAGTAACCTCCATTAGGCTTTTCTCTTACTTCAAACGCAACACCCTTCCGACCACAAGTTTACCTAAACCTCCTAGACTTCTGGATCTCATTTCTCCAAAGGGAAATGCCGCCTCTGAAAGTCGCCAAACCCATCTTCGGCTCATCAAGGACTTTTTACAAACAGATTCCGATCAATGTCGATCTCAAACCCTTTCCGATGGTTTTGATTCTGATTCAGTTTTTTTATCCAAGGATTCCTCCAGTGTTCTTGATCAAGAACGTGAGTCTGGTCACTGGGGTTTTCAGTTGTTCGCAGGGAGATTTGAATTTGATGCGAACGATATATCCAGCGCTTTGAGTTTGTGCTGTTCTCAGCGCAATCTTCGTGGTGGTATTCAGTATCATTCTGTGGCAATACGAACTGGGTTTATTGCCAATGTGTATGTAGGAAGTTCGCTGGTAAGTTTATACGGAAAGTGTTGGGAGATGACTGACGCATGTCAAGTGTTTGATGAAATGCCTGTGAGAAATGTTGTGTCATGGACAGCCATGATTGCTGGGTTTGCTCAAGAATGGCAAGTTGATATGTGCTTGGAGCTTTTCCAACAGATGAAAAGAATGGCATTACGACCCAATGAGTTTACTTTTGCCACCATATTGAGCGCTTGCACTGGCAGTGGAGCCCTTGGAGTTGGAAGAAGCCTCCATTGTCAAACATTCAAAATGGGCTTTGATTCTCATGTTCATATTGCAAATGCTCTGATCTCAATGTACTGTAAATGTGGAGCTCTTAACTTTGCAGTATACTTGTTTGAAGCCATGGAAGTTAAAGACACTGTTTCTTGGAATTCCATGATTGCTGGCTATGCCCAACATGGGCTCTCTCTGCAAGCCATTGATCTTTTTGAAGCAATGAGGAAGCAGCAGCAAGTGGAAGCCGATGGCATCACTTTCCTTGGTGTTCTGTCCTCATGTAGACATGGGGGGCTTGTGGAAGAGGGTAGATATTACTTCAATCTTATGGTCGAGCTCAGTTTGAAACCGGAGTTGGATCATTATTCGTGTGTTATCGATCTGCTTGGCCGAGCTGGGCTACTGAAAGAGGCTCAAAACTTCATTGAGAAGATGCCCATATCTCCAAATTCTATAGTTTGGGGATCGCTTCTCTCTGCTTGCAGGCTTCATGGGAATGTCTGGATAGGACTGAAGGCAGCAGAGAGTAGATTGTTACTGCAACCCGATTGTGCTTCGACGCACTTGCAGTTGGCTAATCTGTATGCAAGAGCAGGGTACTTGGACGACGCAGCGAGATTGAGGAAGATGATGAAAGACAAAGGGCTGAAGACTTCTCCTGGATATAGTTGGATTGAGATTCAGAATAAGGTTTACAGATTTAAAGCAGAAGATAAGTCAAACCCTGTAATGATTGAGATTTTTGGTGTTATGGATGGCATGGTGAATCACATGAGATCTGTAGGCTGTGTTCCTGAAGTGGACGACGAACTAGAAAATGCTTTACTAGCAACGTCTTAAAACTTCAAACTTGTTAGATACATAATTAAAAGTTCAGCAATCTATTTGGAAGGCCATAGTGAAAAGGGTTGACTAGCAGTCACACGACAAAAACAGCCTAGTTTCACGATAATTCGACAACCTTATTTTTATGTAATCCAGATATCCTTCCTTCCAAATGCAGTTCTTTAGTACAAACAAGCTGCTAATTTGTGAAAAAAAGGAAGAATTCAGGTCACTTTGAATGATGCATGTGACTCTGCTAACTTGAGGCTTGAGATATGAAGATGCAAGTCATAACTCATACGACTACTTCAAGACGCCCAGACACCGAGCCAACGAGAAAAATGTGTAG

mRNA sequence

ATGACAGTTCGTCTTCTTCATACGCTCTTCGTGATATCTGAATCTTCTGCACTTCTTTGTAGGCATGGGTTCCATATAGTAACCTCCATTAGGCTTTTCTCTTACTTCAAACGCAACACCCTTCCGACCACAAGTTTACCTAAACCTCCTAGACTTCTGGATCTCATTTCTCCAAAGGGAAATGCCGCCTCTGAAAGTCGCCAAACCCATCTTCGGCTCATCAAGGACTTTTTACAAACAGATTCCGATCAATGTCGATCTCAAACCCTTTCCGATGGTTTTGATTCTGATTCAGTTTTTTTATCCAAGGATTCCTCCAGTGTTCTTGATCAAGAACGTGAGTCTGGTCACTGGGGTTTTCAGTTGTTCGCAGGGAGATTTGAATTTGATGCGAACGATATATCCAGCGCTTTGAGTTTGTGCTGTTCTCAGCGCAATCTTCGTGGTGATGCAAGTCATAACTCATACGACTACTTCAAGACGCCCAGACACCGAGCCAACGAGAAAAATGTGTAG

Coding sequence (CDS)

ATGACAGTTCGTCTTCTTCATACGCTCTTCGTGATATCTGAATCTTCTGCACTTCTTTGTAGGCATGGGTTCCATATAGTAACCTCCATTAGGCTTTTCTCTTACTTCAAACGCAACACCCTTCCGACCACAAGTTTACCTAAACCTCCTAGACTTCTGGATCTCATTTCTCCAAAGGGAAATGCCGCCTCTGAAAGTCGCCAAACCCATCTTCGGCTCATCAAGGACTTTTTACAAACAGATTCCGATCAATGTCGATCTCAAACCCTTTCCGATGGTTTTGATTCTGATTCAGTTTTTTTATCCAAGGATTCCTCCAGTGTTCTTGATCAAGAACGTGAGTCTGGTCACTGGGGTTTTCAGTTGTTCGCAGGGAGATTTGAATTTGATGCGAACGATATATCCAGCGCTTTGAGTTTGTGCTGTTCTCAGCGCAATCTTCGTGGTGATGCAAGTCATAACTCATACGACTACTTCAAGACGCCCAGACACCGAGCCAACGAGAAAAATGTGTAG

Protein sequence

MTVRLLHTLFVISESSALLCRHGFHIVTSIRLFSYFKRNTLPTTSLPKPPRLLDLISPKGNAASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWGFQLFAGRFEFDANDISSALSLCCSQRNLRGDASHNSYDYFKTPRHRANEKNV
Homology
[Close]
BLAST of Cp4.1LG10g09120 vs. NCBI nr
Match: XP_023544680.1 (pentatricopeptide repeat-containing protein At2g37320 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 296 bits (758), Expect = 1.75e-95
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = 0 

Query: 1   MTVRLLHTLFVISESSALLCRHGFHIVTSIRLFSYFKRNTLPTTSLPKPPRLLDLISPKG 60
           MTVRLLHTLFVISESSALLCRHGFHIVTSIRLFSYFKRNTLPTTSLPKPPRLLDLISPKG
Sbjct: 1   MTVRLLHTLFVISESSALLCRHGFHIVTSIRLFSYFKRNTLPTTSLPKPPRLLDLISPKG 60

Query: 61  NAASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWGF 120
           NAASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWGF
Sbjct: 61  NAASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWGF 120

Query: 121 QLFAGRFEFDANDISSALSLCCSQRNLRGDASHNS 155
           QLFAGRFEFDANDISSALSLCCSQRNLRG   ++S
Sbjct: 121 QLFAGRFEFDANDISSALSLCCSQRNLRGGIQYHS 155

[Close]
BLAST of Cp4.1LG10g09120 vs. NCBI nr
Match: XP_022977771.1 (pentatricopeptide repeat-containing protein At2g37320 [Cucurbita maxima])

HSP 1 Score: 286 bits (733), Expect = 4.53e-91
Identity = 145/155 (93.55%), Postives = 149/155 (96.13%), Query Frame = 0 

Query: 1   MTVRLLHTLFVISESSALLCRHGFHIVTSIRLFSYFKRNTLPTTSLPKPPRLLDLISPKG 60
           MTVRLLH LFVIS+SSALLCRHGFHIVTSIRLFSYFKRNT PTT+LPKPPRLLDLISPKG
Sbjct: 1   MTVRLLHMLFVISQSSALLCRHGFHIVTSIRLFSYFKRNTRPTTNLPKPPRLLDLISPKG 60

Query: 61  NAASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWGF 120
           NAASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHW F
Sbjct: 61  NAASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWDF 120

Query: 121 QLFAGRFEFDANDISSALSLCCSQRNLRGDASHNS 155
           QLFAGRFEFDANDISSALSLCCSQRNLRG   ++S
Sbjct: 121 QLFAGRFEFDANDISSALSLCCSQRNLRGGIQYHS 155

[Close]
BLAST of Cp4.1LG10g09120 vs. NCBI nr
Match: KAG6603691.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 284 bits (727), Expect = 7.98e-91
Identity = 144/155 (92.90%), Postives = 148/155 (95.48%), Query Frame = 0 

Query: 1   MTVRLLHTLFVISESSALLCRHGFHIVTSIRLFSYFKRNTLPTTSLPKPPRLLDLISPKG 60
           MTVRLLH LFVIS SSALLCRHGFHIVTSIRLFSYFKRNT PTT+LPKPPRLLDLISPKG
Sbjct: 1   MTVRLLHMLFVISASSALLCRHGFHIVTSIRLFSYFKRNTRPTTNLPKPPRLLDLISPKG 60

Query: 61  NAASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWGF 120
           NAASESRQTHLRLIKDFL+TDSDQCRSQTLSDGFDSDSVFLSKDSSSV DQERESGHWGF
Sbjct: 61  NAASESRQTHLRLIKDFLRTDSDQCRSQTLSDGFDSDSVFLSKDSSSVRDQERESGHWGF 120

Query: 121 QLFAGRFEFDANDISSALSLCCSQRNLRGDASHNS 155
           QLFAGRFEFDANDISSALSLCCSQRNLRG   ++S
Sbjct: 121 QLFAGRFEFDANDISSALSLCCSQRNLRGGIQYHS 155

[Close]
BLAST of Cp4.1LG10g09120 vs. NCBI nr
Match: XP_022949850.1 (pentatricopeptide repeat-containing protein At2g37320 [Cucurbita moschata])

HSP 1 Score: 282 bits (721), Expect = 6.35e-90
Identity = 143/155 (92.26%), Postives = 147/155 (94.84%), Query Frame = 0 

Query: 1   MTVRLLHTLFVISESSALLCRHGFHIVTSIRLFSYFKRNTLPTTSLPKPPRLLDLISPKG 60
           MTVRLLH LFVIS SSALLCRHGFHIVTSIRLFSYFKRNT PTT+LPKPPRLLDLISPKG
Sbjct: 1   MTVRLLHMLFVISASSALLCRHGFHIVTSIRLFSYFKRNTRPTTNLPKPPRLLDLISPKG 60

Query: 61  NAASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWGF 120
           NAASESRQTHLRLIKDFL+TDSDQCRSQTLSDGFDSDSVFLSKDSSSV DQERESGHWGF
Sbjct: 61  NAASESRQTHLRLIKDFLRTDSDQCRSQTLSDGFDSDSVFLSKDSSSVRDQERESGHWGF 120

Query: 121 QLFAGRFEFDANDISSALSLCCSQRNLRGDASHNS 155
           QLFAGRFEFDANDISSALSLCCSQRN RG   ++S
Sbjct: 121 QLFAGRFEFDANDISSALSLCCSQRNRRGGIQYHS 155

[Close]
BLAST of Cp4.1LG10g09120 vs. NCBI nr
Match: KAG7033868.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272 bits (696), Expect = 2.99e-86
Identity = 137/147 (93.20%), Postives = 141/147 (95.92%), Query Frame = 0 

Query: 9   LFVISESSALLCRHGFHIVTSIRLFSYFKRNTLPTTSLPKPPRLLDLISPKGNAASESRQ 68
           LFVIS SSALLCRHGFHIVTSIRLFSYFKRNT PTT+LPKPPRLLDLISPKGNAASESRQ
Sbjct: 2   LFVISASSALLCRHGFHIVTSIRLFSYFKRNTRPTTNLPKPPRLLDLISPKGNAASESRQ 61

Query: 69  THLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWGFQLFAGRFE 128
           THLRLIKDFL+TDSDQCRSQTLSDGFDSDSVFLSKDSSSV DQERESGHWGFQLFAGRFE
Sbjct: 62  THLRLIKDFLRTDSDQCRSQTLSDGFDSDSVFLSKDSSSVRDQERESGHWGFQLFAGRFE 121

Query: 129 FDANDISSALSLCCSQRNLRGDASHNS 155
           FDANDISSALSLCCSQRNLRG   ++S
Sbjct: 122 FDANDISSALSLCCSQRNLRGGIQYHS 148

[Close]
BLAST of Cp4.1LG10g09120 vs. ExPASy TrEMBL
Match: A0A6J1IKW6 (pentatricopeptide repeat-containing protein At2g37320 OS=Cucurbita maxima OX=3661 GN=LOC111477972 PE=4 SV=1)

HSP 1 Score: 286 bits (733), Expect = 2.19e-91
Identity = 145/155 (93.55%), Postives = 149/155 (96.13%), Query Frame = 0 

Query: 1   MTVRLLHTLFVISESSALLCRHGFHIVTSIRLFSYFKRNTLPTTSLPKPPRLLDLISPKG 60
           MTVRLLH LFVIS+SSALLCRHGFHIVTSIRLFSYFKRNT PTT+LPKPPRLLDLISPKG
Sbjct: 1   MTVRLLHMLFVISQSSALLCRHGFHIVTSIRLFSYFKRNTRPTTNLPKPPRLLDLISPKG 60

Query: 61  NAASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWGF 120
           NAASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHW F
Sbjct: 61  NAASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWDF 120

Query: 121 QLFAGRFEFDANDISSALSLCCSQRNLRGDASHNS 155
           QLFAGRFEFDANDISSALSLCCSQRNLRG   ++S
Sbjct: 121 QLFAGRFEFDANDISSALSLCCSQRNLRGGIQYHS 155

[Close]
BLAST of Cp4.1LG10g09120 vs. ExPASy TrEMBL
Match: A0A6J1GDY6 (pentatricopeptide repeat-containing protein At2g37320 OS=Cucurbita moschata OX=3662 GN=LOC111453122 PE=4 SV=1)

HSP 1 Score: 282 bits (721), Expect = 3.08e-90
Identity = 143/155 (92.26%), Postives = 147/155 (94.84%), Query Frame = 0 

Query: 1   MTVRLLHTLFVISESSALLCRHGFHIVTSIRLFSYFKRNTLPTTSLPKPPRLLDLISPKG 60
           MTVRLLH LFVIS SSALLCRHGFHIVTSIRLFSYFKRNT PTT+LPKPPRLLDLISPKG
Sbjct: 1   MTVRLLHMLFVISASSALLCRHGFHIVTSIRLFSYFKRNTRPTTNLPKPPRLLDLISPKG 60

Query: 61  NAASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWGF 120
           NAASESRQTHLRLIKDFL+TDSDQCRSQTLSDGFDSDSVFLSKDSSSV DQERESGHWGF
Sbjct: 61  NAASESRQTHLRLIKDFLRTDSDQCRSQTLSDGFDSDSVFLSKDSSSVRDQERESGHWGF 120

Query: 121 QLFAGRFEFDANDISSALSLCCSQRNLRGDASHNS 155
           QLFAGRFEFDANDISSALSLCCSQRN RG   ++S
Sbjct: 121 QLFAGRFEFDANDISSALSLCCSQRNRRGGIQYHS 155

[Close]
BLAST of Cp4.1LG10g09120 vs. ExPASy TrEMBL
Match: A0A1S3BGK7 (pentatricopeptide repeat-containing protein At2g37320 OS=Cucumis melo OX=3656 GN=LOC103489779 PE=4 SV=1)

HSP 1 Score: 207 bits (528), Expect = 1.91e-61
Identity = 112/151 (74.17%), Postives = 123/151 (81.46%), Query Frame = 0 

Query: 5   LLHTLFVISESSALLCRHGFHIVTSIRLFSYFKRNTLPTTSLPKPPRLLDLISPKGNAAS 64
           LLH LF IS+SSA   RHGF++V S+R FS FK NT PTT+LPKP RLLDLISPKG+ + 
Sbjct: 5   LLHMLFAISQSSARY-RHGFNVVPSVRFFSNFKSNTHPTTNLPKPLRLLDLISPKGDVSY 64

Query: 65  ESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWGFQLFA 124
           ESRQTHLRLI+DFLQTD DQCRSQTLS GFDS SV LSKDSS VLDQE ESGHW  Q FA
Sbjct: 65  ESRQTHLRLIQDFLQTDPDQCRSQTLSVGFDSRSVGLSKDSSFVLDQECESGHWDVQSFA 124

Query: 125 GRFEFDANDISSALSLCCSQRNLRGDASHNS 155
           GRF+F ANDISS LSLC SQRNLRG   ++S
Sbjct: 125 GRFKFSANDISSVLSLCNSQRNLRGGLQYHS 154

[Close]
BLAST of Cp4.1LG10g09120 vs. ExPASy TrEMBL
Match: A0A0A0KX36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293100 PE=4 SV=1)

HSP 1 Score: 204 bits (518), Expect = 5.31e-60
Identity = 110/151 (72.85%), Postives = 123/151 (81.46%), Query Frame = 0 

Query: 5   LLHTLFVISESSALLCRHGFHIVTSIRLFSYFKRNTLPTTSLPKPPRLLDLISPKGNAAS 64
           LLH LF IS+SSA   RHGF+++ SIR FS FK NT PTT+LPKPPRLLDLISPKG+ + 
Sbjct: 5   LLHMLFPISQSSAPY-RHGFNVLPSIRFFSNFKSNTHPTTNLPKPPRLLDLISPKGDVSY 64

Query: 65  ESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWGFQLFA 124
           ESRQTHLRLI+DFLQTDS QCRSQTL  G DS S+ LSKDSS VLDQE ESGHW  Q FA
Sbjct: 65  ESRQTHLRLIQDFLQTDSGQCRSQTLPVGCDSRSIGLSKDSSFVLDQECESGHWDVQSFA 124

Query: 125 GRFEFDANDISSALSLCCSQRNLRGDASHNS 155
           GRF+F+ANDISS LSLC SQRNLRG   ++S
Sbjct: 125 GRFKFNANDISSVLSLCNSQRNLRGGIQYHS 154

[Close]
BLAST of Cp4.1LG10g09120 vs. ExPASy TrEMBL
Match: A0A5A7U1F7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001370 PE=4 SV=1)

HSP 1 Score: 202 bits (515), Expect = 1.39e-59
Identity = 109/147 (74.15%), Postives = 120/147 (81.63%), Query Frame = 0 

Query: 9   LFVISESSALLCRHGFHIVTSIRLFSYFKRNTLPTTSLPKPPRLLDLISPKGNAASESRQ 68
           LF IS+SSA   RHGF++V S+R FS FK NT PTT+LPKP RLLDLISPKG+ + ESRQ
Sbjct: 2   LFAISQSSARY-RHGFNVVPSVRFFSNFKSNTHPTTNLPKPLRLLDLISPKGDVSYESRQ 61

Query: 69  THLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWGFQLFAGRFE 128
           THLRLI+DFLQTD DQCRSQTLS GFDS SV LSKDSS VLDQE ESGHW  Q FAGRF+
Sbjct: 62  THLRLIQDFLQTDPDQCRSQTLSVGFDSRSVGLSKDSSFVLDQECESGHWDVQSFAGRFK 121

Query: 129 FDANDISSALSLCCSQRNLRGDASHNS 155
           F ANDISS LSLC SQRNLRG   ++S
Sbjct: 122 FSANDISSVLSLCNSQRNLRGGLQYHS 147

[Close]
BLAST of Cp4.1LG10g09120 vs. TAIR 10
Match: AT2G37320.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.5e-04
Identity = 32/98 (32.65%), Postives = 51/98 (52.04%), Query Frame = 0 

Query: 51  RLLDLISPKGNAASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLD 110
           R+LD+IS K    S +RQ H   +++F QTDS + R Q +S+ FD   +  +K+  S + 
Sbjct: 44  RVLDIISSKSGGVS-NRQDHFGFVQEFRQTDSWRFRGQAISEDFD---LSRTKNGVSSVL 103

Query: 111 QERESGHWGFQLFAGRFEFDANDISSALSLCCSQRNLR 149
           +E         +    + FDA  +SSA+  C   R+ R
Sbjct: 104 EEVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFR 137

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g09120 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG10g09120 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023544680.11.75e-9596.77pentatricopeptide repeat-containing protein At2g37320 [Cucurbita pepo subsp. pep... [more]
XP_022977771.14.53e-9193.55pentatricopeptide repeat-containing protein At2g37320 [Cucurbita maxima][more]
KAG6603691.17.98e-9192.90Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022949850.16.35e-9092.26pentatricopeptide repeat-containing protein At2g37320 [Cucurbita moschata][more]
KAG7033868.12.99e-8693.20Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
BLAST of Cp4.1LG10g09120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IKW62.19e-9193.55pentatricopeptide repeat-containing protein At2g37320 OS=Cucurbita maxima OX=366... [more]
A0A6J1GDY63.08e-9092.26pentatricopeptide repeat-containing protein At2g37320 OS=Cucurbita moschata OX=3... [more]
A0A1S3BGK71.91e-6174.17pentatricopeptide repeat-containing protein At2g37320 OS=Cucumis melo OX=3656 GN... [more]
A0A0A0KX365.31e-6072.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293100 PE=4 SV=1[more]
A0A5A7U1F71.39e-5974.15Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of Cp4.1LG10g09120 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G37320.11.5e-0432.65Tetratricopeptide repeat (TPR)-like superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g09120.1Cp4.1LG10g09120.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0003723 RNA binding