Cp4.1LG10g08990 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g08990
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase
Location	Cp4.1LG10: 4824177 .. 4827990 (-)
RNA-Seq Expression	Cp4.1LG10g08990
Synteny	Cp4.1LG10g08990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTCATTCAAAAAATGTAAATATATTTTCAAATTTTGAAGATCACGATGGATTGTATATTAATTTCGAAGAGTTATTTAGTAATAAAAATTTGCTACAATATATATATATATATATATATATATATTTAGGAATTTATTTGAAGGGAGAATTTGTTAAATAATTAAAATTGATTTAAAAATAAAATAAAAAACTGAAATTTTTTGTTCGAACTCGGAACGGTGAACAGCCACCGCCCCGACACCTCAGTGAACGCGCCATAAACTCCGATTATCTCTCCTTTTCTTTGCGAAAAAATGACGAATCTCAATCTGCTCCGTAAGGCGCTTGGATCGCACTTCATTTCTCGTTCAGCGACGCCAAATCATGGCCTCCCTGTGTTTTTCCGCCAATCTTCAAGATTCTTCTCGACGGAAGGGGAACAATCACCTCCTGAATCGTCCGCCGATTCTTTTCTCGATACATCAGGAGCGACAGGTATGAATCTCGTTCCTACGTCTTCACCGAGTCTGGACGATGTCCTCGTGTCGTGTATTATGTTGGGAGAGGTTTAGGGTTTATAGATTGTGGCTGGTTAGAATTTTGGGAACAATTTTCTTTCTCGTTTATTTGAGCTTCTGGTAAATAAGTTCGGCTGATTGTCCTAATCGATTCAGGTTTTTTTGATTCTGTAAGTTTGAGTAATTTGGAATGCATTAATCGCTACGAAAGCCTTTTGGTGTCCTTACTGCTATACTGTTATCATTTAGGTAGCTGATTTTTTTGTCTGATTCTACGTAGTGCAATGCCTAATGAGTTTTTTGTTACACTGTTATCAGGTTTGGTGTATGGAAAATTGTATGGTATCACAAGGAATGTTCTAAAGACAGACATTGTCAATTTGCTTGAAGGATGCAATTTGAGTTTGGATGATGTCAAAGTTGAATACAACCGGAGTTTCACGCCAACCTCTATGTAATGTTCTTCTCTTGCATATTTTGAATATAGATGCTTTCTGTATTAGGTTTTACCATCGTTGTTATGCTTCTATTCCTACTGCATCTTGGAAACTAAAATAATCAAAGAATATCTCATTGCCCTTTTGGTCCTTAAAGCATTAATACAAATGCAGTCGTTAAGCCTGGATTATTAGCTTCATGTTAATCTATGGAATATGCGTTCAGTTAAGCGCGTTGTACCTTTCTGTAAAAGGGTTAGCCTGGATTATTAGCTTCATGTTAATCTATGGAATATGCGTTCAATTAAGCGCGTTGTACCTTTCTGTAAAAGGGTTAGCCTGGATTATTAGCTTCATGTTAATCTATGGAATATGCGTTCAATTAAGCGCGTTGTACCTTTCTGTAAAAGGGTTAGCCTGGATTATTAGCTTCATGTTAATCTATGGAATATGCGTTCAATTAAGCGCGTTGTACCTTTCTGTAAAAGGGTTAGCCTGGATTATTAGCTTCATGTTAATCTATGGAATATGCGTTCAATTAAGCGCGTTGTACCTTTCTGTAAAAGGGTTAGCCTGGATTATTAGCTTCATGTTAATCTATGGAATATGCGTTCAATTAAGCGCGTTGTACCTTTCTGTAAAAGGGTTAGCCTGGATTATTAGCTTCATGTTAATCTATGGAATATGCGTTCAATTAAGTGCGTTGTACCTTTCTGTAAAAGGGTTATATTTCTAAGGAGAAACCCAATTGTGTAATGTTTATGGATGTTGAGTAACACTGGTGTTCGAGGTTGGTTTTCATTAAATATTTATGGATGTTGTAATCAGGATGATGCAATTCCCCTCCCGGAAGGCCTATGATAATGCTTTTCGAGTGATTGGAAGAAGAGGTCGCATGTACAGATTGGAGCGGGTGATGTTCTGATGGATATCTAACAAAAAATGGATTTATTTTTTGTCTTGTTTTAAAATTTAGAAATCTATTAACTTCTATTCTAAATTTCAGGCTGATCGTTCGCAGTGGGACCTTCTTTCACCTTACAATGGAAAAACTGTAATGTCATTTTTTGAAAATTATGAACTTATTGTCCATTGAGAAATCTCTTTACCATTCATATTCTTGTTTTTGCTATTGGCATCTTTGATCAGAAAGCAATCCATTCTACTTTATCTTTGTTTATCTAATATCATATGCTCGAATGGCATGGTTTCGAGGATCAAGCATACATATCAATATGTTCTCTGCTATTCTACTGCATGATGGTTAATTTCAATGAATTGTTCCTTACATCTCCAAATTTAAAACTGATTATAGAGAAACTACTTTTTCATGTTAAACTGTTTAGAAGGGAGTAAGAAAAATGTTAGCCAAGGTCCTTGGTCTGGATCGCCCTTTAGTAGCTTCTCGAGGATATAAAACTGTTGTAACGACTTCAACTTAGAAGATTAAGGGTTTTTATCGTAAGATCGTTTATAATGAAAAGATAACATGCACTGATGTGATTAGATTTTCAATTGAAACTTGATATTTCAAGATTAAGAATTGGCTACCTTTCTGGTCGTAAGTTTGTTGTTAGTAAAATCATGTGCCAACTTATTGTGCAGACTGCAGTTAATGGGTGTCTCATATTAAATTTAAGCCTCTCAACTCTGGATTGGTTCGGACTTTTTTCCTGTGGGATTAAATTTTCTTTGTACATACAGGTCCTTCTGCAAGGAATACCTCGAAATGCAGCGCTAGATGACGTGGAGCGCTTCTTATCTGGCTGTGACTATGATGCAACCTCAATCAATATGTTTTTCAGGTAGAGATCAATTATATGTACCAAAGTTTCATACATCAATGAAAAAAAGTAATAATAGTTTTTTTTTTTTTTAAAAAAAAAGTTCAGAATTAGTATTGTAGTACTTGTAGGAATTCTGTGTGATGCATCATTTGTACATCATTGCAGGGCATCCATTCCAGAGCCCATCAGAATGGCAACAGTGCTGTTCCCTTCACCAACCCAAGCAATGCATGCATTTCTTACCAAGAACAGAGGCTTTTGTCTGAACAACCAAATTTTGATGCGGGTTCTCCAATAACTAGTTACTGTTGTCATCTATATTCTACACATTTTTCTCGTTGGCTCGGTGTCTGGGCGTCTTGAAGTAGTCGTATGAGTTATGACTTGCATCTTCATATCTCAAGCCTCAAGTTAGCAGAGTCACATGCATCATTCAAAGTGACCTGAATTCTTCCTTTTTTTCACAAATTAGCAGCTTGTTTGTACTAAAGAACTGCATTTGGAAGGAAGGATATCTGGATTACATAAAAATAAGGTTGTCGAATTATCGTGAAACTAGGCTGTTTTTGTCGTGTGACTGCTAGTCAACCCTTTTCACTATGGCCTTCCAAATAGATTGCTGAACTTTTAATTATGTATCTAACAAGTTTGAAGTTTTAAGACGTTGCTAGTAAAGCATTTTCTAGTTCGTCGTCCACTTCAGGAACACAGCCTACAGATCTCATGTGATTCACCATGCCATCCATAACACCAAAAATCTCAATCATTACAGGGTTTGACTTATCTTCTGCTTTAAATCTGTAAACCTTATTCTGAATCTCAATCCAACTATATCCAGGAGAAGTCTTCAGCCCTTTGTCTTTCATCATCTTCCTCAATCTCGCTGCGTCGTCCAAGTACCCTGCTCTTGCATACAGATTAGCCAACTGCAAGTGCGTCGAAGCACAATCGGGTTGCAGTAACAATCTACTCTCTGCTGCCTTCAGTCCTATCCAGACATTCCCATGAAGCCTGCAAGCAGAGAGAAGCGATCCCCAAACTATAGAATTTGGAGATATGGGCATCTTCTCAATGAAGTTTTGAGCCTC

mRNA sequence

TTTTTTCATTCAAAAAATGTAAATATATTTTCAAATTTTGAAGATCACGATGGATTGTATATTAATTTCGAAGAGTTATTTAGTAATAAAAATTTGCTACAATATATATATATATATATATATATATATTTAGGAATTTATTTGAAGGGAGAATTTGTTAAATAATTAAAATTGATTTAAAAATAAAATAAAAAACTGAAATTTTTTGTTCGAACTCGGAACGGTGAACAGCCACCGCCCCGACACCTCAGTGAACGCGCCATAAACTCCGATTATCTCTCCTTTTCTTTGCGAAAAAATGACGAATCTCAATCTGCTCCGTAAGGCGCTTGGATCGCACTTCATTTCTCGTTCAGCGACGCCAAATCATGGCCTCCCTGTGTTTTTCCGCCAATCTTCAAGATTCTTCTCGACGGAAGGGGAACAATCACCTCCTGAATCGTCCGCCGATTCTTTTCTCGATACATCAGGAGCGACAGGTTTGGTGTATGGAAAATTGTATGGTATCACAAGGAATGTTCTAAAGACAGACATTGTCAATTTGCTTGAAGGATGCAATTTGAGTTTGGATGATGTCAAAGTTGAATACAACCGGAGTTTCACGCCAACCTCTATGATGATGCAATTCCCCTCCCGGAAGGCCTATGATAATGCTTTTCGAGTGATTGGAAGAAGAGGTCGCATGTACAGATTGGAGCGGGCTGATCGTTCGCAGTGGGACCTTCTTTCACCTTACAATGGAAAAACTGTCCTTCTGCAAGGAATACCTCGAAATGCAGCGCTAGATGACGTGGAGCGCTTCTTATCTGGCTGTGACTATGATGCAACCTCAATCAATATGTTTTTCAGGGCATCCATTCCAGAGCCCATCAGAATGGCAACAGTGCTGTTCCCTTCACCAACCCAAGCAATGCATGCATTTCTTACCAAGAACAGAGGCTTTTGTCTGAACAACCAAATTTTGATGCGGGTTCTCCAATAACTAGTTACTGTTGTCATCTATATTCTACACATTTTTCTCGTTGGCTCGGTGTCTGGGCGTCTTGAAGTAGTCGTATGAGTTATGACTTGCATCTTCATATCTCAAGCCTCAAGTTAGCAGAGTCACATGCATCATTCAAAGTGACCTGAATTCTTCCTTTTTTTCACAAATTAGCAGCTTGTTTGTACTAAAGAACTGCATTTGGAAGGAAGGATATCTGGATTACATAAAAATAAGGTTGTCGAATTATCGTGAAACTAGGCTGTTTTTGTCGTGTGACTGCTAGTCAACCCTTTTCACTATGGCCTTCCAAATAGATTGCTGAACTTTTAATTATGTATCTAACAAGTTTGAAGTTTTAAGACGTTGCTAGTAAAGCATTTTCTAGTTCGTCGTCCACTTCAGGAACACAGCCTACAGATCTCATGTGATTCACCATGCCATCCATAACACCAAAAATCTCAATCATTACAGGGTTTGACTTATCTTCTGCTTTAAATCTGTAAACCTTATTCTGAATCTCAATCCAACTATATCCAGGAGAAGTCTTCAGCCCTTTGTCTTTCATCATCTTCCTCAATCTCGCTGCGTCGTCCAAGTACCCTGCTCTTGCATACAGATTAGCCAACTGCAAGTGCGTCGAAGCACAATCGGGTTGCAGTAACAATCTACTCTCTGCTGCCTTCAGTCCTATCCAGACATTCCCATGAAGCCTGCAAGCAGAGAGAAGCGATCCCCAAACTATAGAATTTGGAGATATGGGCATCTTCTCAATGAAGTTTTGAGCCTC

Coding sequence (CDS)

ATGACGAATCTCAATCTGCTCCGTAAGGCGCTTGGATCGCACTTCATTTCTCGTTCAGCGACGCCAAATCATGGCCTCCCTGTGTTTTTCCGCCAATCTTCAAGATTCTTCTCGACGGAAGGGGAACAATCACCTCCTGAATCGTCCGCCGATTCTTTTCTCGATACATCAGGAGCGACAGGTTTGGTGTATGGAAAATTGTATGGTATCACAAGGAATGTTCTAAAGACAGACATTGTCAATTTGCTTGAAGGATGCAATTTGAGTTTGGATGATGTCAAAGTTGAATACAACCGGAGTTTCACGCCAACCTCTATGATGATGCAATTCCCCTCCCGGAAGGCCTATGATAATGCTTTTCGAGTGATTGGAAGAAGAGGTCGCATGTACAGATTGGAGCGGGCTGATCGTTCGCAGTGGGACCTTCTTTCACCTTACAATGGAAAAACTGTCCTTCTGCAAGGAATACCTCGAAATGCAGCGCTAGATGACGTGGAGCGCTTCTTATCTGGCTGTGACTATGATGCAACCTCAATCAATATGTTTTTCAGGGCATCCATTCCAGAGCCCATCAGAATGGCAACAGTGCTGTTCCCTTCACCAACCCAAGCAATGCATGCATTTCTTACCAAGAACAGAGGCTTTTGTCTGAACAACCAAATTTTGATGCGGGTTCTCCAATAA

Protein sequence

MTNLNLLRKALGSHFISRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGATGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ

Homology

[Close]

BLAST of Cp4.1LG10g08990 vs. NCBI nr
Match: XP_023544682.1 (uncharacterized protein LOC111804194 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454 bits (1169), Expect = 3.25e-161
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGAT 60
           MTNLNLLRKALGSHFISRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGAT
Sbjct: 1   MTNLNLLRKALGSHFISRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGAT 60

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAF 120
           GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAF
Sbjct: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAF 120

Query: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATSIN 180
           RVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATSIN
Sbjct: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATSIN 180

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
           MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of Cp4.1LG10g08990 vs. NCBI nr
Match: XP_022949855.1 (uncharacterized protein LOC111453126 [Cucurbita moschata])

HSP 1 Score: 438 bits (1127), Expect = 8.24e-155
Identity = 219/227 (96.48%), Postives = 221/227 (97.36%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGAT 60
           MTNLNLLRKALGSHF SRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSA+SFLDTS   
Sbjct: 1   MTNLNLLRKALGSHFTSRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSANSFLDTSETA 60

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAF 120
           GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPS KAYDNAF
Sbjct: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSWKAYDNAF 120

Query: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATSIN 180
           RVIGRRGRMYRLERADRSQWDLLSPYNGK +LLQGIPRNAALDDVERFLSGCDYDATSIN
Sbjct: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKIILLQGIPRNAALDDVERFLSGCDYDATSIN 180

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
           MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of Cp4.1LG10g08990 vs. NCBI nr
Match: XP_022977775.1 (uncharacterized protein LOC111477976 [Cucurbita maxima])

HSP 1 Score: 434 bits (1117), Expect = 2.76e-153
Identity = 217/227 (95.59%), Postives = 220/227 (96.92%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGAT 60
           MTNLNLLRKALGSHFIS SATPNHGLPVFFRQSSRFFS EGEQSPPESSA+SFLDT    
Sbjct: 1   MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 60

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAF 120
           GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRK+YDNAF
Sbjct: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF 120

Query: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATSIN 180
           RVIGRRGR+YRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDAT IN
Sbjct: 121 RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN 180

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
           MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of Cp4.1LG10g08990 vs. NCBI nr
Match: XP_022972751.1 (uncharacterized protein LOC111471264 [Cucurbita maxima])

HSP 1 Score: 403 bits (1035), Expect = 8.71e-141
Identity = 199/227 (87.67%), Postives = 210/227 (92.51%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGAT 60
           M+ L LLRKALGSHF++ SA  NHGLPVFFRQS RFFSTEGEQ P E  ADSFLDTS   
Sbjct: 1   MSALGLLRKALGSHFVTPSARANHGLPVFFRQSPRFFSTEGEQPPLEPPADSFLDTSKTA 60

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAF 120
           GLVYGKLYGITRN LKTDIVNLLEGCNL+LDDVKVEYNRSFTPTSMMMQFPSR+AYDNAF
Sbjct: 61  GLVYGKLYGITRNTLKTDIVNLLEGCNLNLDDVKVEYNRSFTPTSMMMQFPSRQAYDNAF 120

Query: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATSIN 180
           RVIGR+GR+YRLERADRSQWD+LSPYNGKTVLLQGIPRNA ++DVERFL GCDYDATSIN
Sbjct: 121 RVIGRKGRLYRLERADRSQWDILSPYNGKTVLLQGIPRNALVEDVERFLLGCDYDATSIN 180

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
           MFFRAS PEP+RMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 MFFRASFPEPMRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of Cp4.1LG10g08990 vs. NCBI nr
Match: XP_023518188.1 (uncharacterized protein LOC111781730 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 397 bits (1021), Expect = 3.98e-138
Identity = 196/227 (86.34%), Postives = 208/227 (91.63%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGAT 60
           M+ L LLRKAL SHF++ SA  NHGLPVFFRQS RFFSTEGEQ P E  AD FLDTS   
Sbjct: 35  MSALGLLRKALRSHFVTPSARANHGLPVFFRQSPRFFSTEGEQPPSEPPADPFLDTSKTA 94

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAF 120
           GLVYGKLYGITRN LKTDIVNLLEGCNL+LDDVKVEYNRSFTPTSMMMQFPSR+AYDNAF
Sbjct: 95  GLVYGKLYGITRNTLKTDIVNLLEGCNLNLDDVKVEYNRSFTPTSMMMQFPSRQAYDNAF 154

Query: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATSIN 180
           RVIGR+GR+YRLERADRSQWD+LSPYNGKTVLLQGIPRNA ++DVERFL GCDYDATSIN
Sbjct: 155 RVIGRKGRLYRLERADRSQWDILSPYNGKTVLLQGIPRNALVEDVERFLLGCDYDATSIN 214

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
           MFFRAS PEP+R+ATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 215 MFFRASFPEPMRLATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 261

[Close]

BLAST of Cp4.1LG10g08990 vs. ExPASy TrEMBL
Match: A0A6J1GDZ1 (uncharacterized protein LOC111453126 OS=Cucurbita moschata OX=3662 GN=LOC111453126 PE=4 SV=1)

HSP 1 Score: 438 bits (1127), Expect = 3.99e-155
Identity = 219/227 (96.48%), Postives = 221/227 (97.36%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGAT 60
           MTNLNLLRKALGSHF SRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSA+SFLDTS   
Sbjct: 1   MTNLNLLRKALGSHFTSRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSANSFLDTSETA 60

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAF 120
           GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPS KAYDNAF
Sbjct: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSWKAYDNAF 120

Query: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATSIN 180
           RVIGRRGRMYRLERADRSQWDLLSPYNGK +LLQGIPRNAALDDVERFLSGCDYDATSIN
Sbjct: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKIILLQGIPRNAALDDVERFLSGCDYDATSIN 180

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
           MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of Cp4.1LG10g08990 vs. ExPASy TrEMBL
Match: A0A6J1INA4 (uncharacterized protein LOC111477976 OS=Cucurbita maxima OX=3661 GN=LOC111477976 PE=4 SV=1)

HSP 1 Score: 434 bits (1117), Expect = 1.34e-153
Identity = 217/227 (95.59%), Postives = 220/227 (96.92%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGAT 60
           MTNLNLLRKALGSHFIS SATPNHGLPVFFRQSSRFFS EGEQSPPESSA+SFLDT    
Sbjct: 1   MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 60

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAF 120
           GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRK+YDNAF
Sbjct: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF 120

Query: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATSIN 180
           RVIGRRGR+YRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDAT IN
Sbjct: 121 RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN 180

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
           MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of Cp4.1LG10g08990 vs. ExPASy TrEMBL
Match: A0A6J1I6U3 (uncharacterized protein LOC111471264 OS=Cucurbita maxima OX=3661 GN=LOC111471264 PE=4 SV=1)

HSP 1 Score: 403 bits (1035), Expect = 4.22e-141
Identity = 199/227 (87.67%), Postives = 210/227 (92.51%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGAT 60
           M+ L LLRKALGSHF++ SA  NHGLPVFFRQS RFFSTEGEQ P E  ADSFLDTS   
Sbjct: 1   MSALGLLRKALGSHFVTPSARANHGLPVFFRQSPRFFSTEGEQPPLEPPADSFLDTSKTA 60

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAF 120
           GLVYGKLYGITRN LKTDIVNLLEGCNL+LDDVKVEYNRSFTPTSMMMQFPSR+AYDNAF
Sbjct: 61  GLVYGKLYGITRNTLKTDIVNLLEGCNLNLDDVKVEYNRSFTPTSMMMQFPSRQAYDNAF 120

Query: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATSIN 180
           RVIGR+GR+YRLERADRSQWD+LSPYNGKTVLLQGIPRNA ++DVERFL GCDYDATSIN
Sbjct: 121 RVIGRKGRLYRLERADRSQWDILSPYNGKTVLLQGIPRNALVEDVERFLLGCDYDATSIN 180

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
           MFFRAS PEP+RMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 MFFRASFPEPMRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of Cp4.1LG10g08990 vs. ExPASy TrEMBL
Match: A0A6J1HGY5 (uncharacterized protein LOC111463377 OS=Cucurbita moschata OX=3662 GN=LOC111463377 PE=4 SV=1)

HSP 1 Score: 393 bits (1010), Expect = 2.72e-137
Identity = 195/227 (85.90%), Postives = 208/227 (91.63%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGAT 60
           M+ L LLRKAL SHF++ SA  NHGLPVFFRQS RFFSTEGEQ P ES AD FLDTS   
Sbjct: 1   MSALGLLRKALRSHFVTPSARANHGLPVFFRQSPRFFSTEGEQPPLESPADPFLDTSKTA 60

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAF 120
           GLVYGKL GITRN LKTDIVNLLEGCNL+LDDVKVEYNRSFTPTSMMMQFPSR+AYDNAF
Sbjct: 61  GLVYGKLSGITRNTLKTDIVNLLEGCNLNLDDVKVEYNRSFTPTSMMMQFPSRQAYDNAF 120

Query: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATSIN 180
           RVIGR+GR+YRLERADRSQWD+LSPY+GKTVLLQGIPRNA ++DVERFL GCDYDATSIN
Sbjct: 121 RVIGRKGRLYRLERADRSQWDILSPYSGKTVLLQGIPRNALVEDVERFLLGCDYDATSIN 180

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
           MFFRAS PEP+R+ATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 MFFRASFPEPMRLATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of Cp4.1LG10g08990 vs. ExPASy TrEMBL
Match: A0A6J1CQY2 (uncharacterized protein LOC111013764 OS=Momordica charantia OX=3673 GN=LOC111013764 PE=4 SV=1)

HSP 1 Score: 384 bits (986), Expect = 1.28e-133
Identity = 192/229 (83.84%), Postives = 207/229 (90.39%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISRSATPNHGLPVFFRQSS--RFFSTEGEQSPPESSADSFLDTSG 60
           M+NL+LLRK  GSHF+SR+   +HG PVFFR+S   R FSTE EQ P E  ADSFLDTS 
Sbjct: 1   MSNLSLLRKEFGSHFLSRAPRTSHGFPVFFRESPTIRLFSTEAEQPPSEPPADSFLDTS- 60

Query: 61  ATGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDN 120
            TGLVYGKLYGITRN LKTDIVNLLEGCNL LDDVKV+YNRSFTPTSMMMQFPSR+AYDN
Sbjct: 61  KTGLVYGKLYGITRNTLKTDIVNLLEGCNLGLDDVKVDYNRSFTPTSMMMQFPSRQAYDN 120

Query: 121 AFRVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATS 180
           A RVIGR+GR+YRLERADRSQWDLLSPYNGKTVLLQG+PRNA  +DVERFLSGC+YDATS
Sbjct: 121 AIRVIGRKGRLYRLERADRSQWDLLSPYNGKTVLLQGLPRNAMQEDVERFLSGCNYDATS 180

Query: 181 INMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
           INMFFRAS+PEP+RMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 INMFFRASVPEPMRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 228

[Close]

BLAST of Cp4.1LG10g08990 vs. TAIR 10
Match: AT5G02740.1 (Ribosomal protein S24e family protein )

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-46
Identity = 102/229 (44.54%), Postives = 138/229 (60.26%), Query Frame = 0


Query: 4   LNLLRKALGSHFISRSATP---NHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGAT 63
           +++ R A+ S    R   P      LP F ++  +  ST  EQ PP S        S   
Sbjct: 1   MSITRSAIRSSLCLRKLDPEISRSSLP-FLQEWRKCLSTATEQPPPASPLPPPPGGSPGE 60

Query: 64  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNR--SFTPTSMMMQFPSRKAYDN 123
           G  YGK  G +++ LKTDI+N+LEGC+L+ DD+K  Y R  + TP ++ +QFPS  AYD 
Sbjct: 61  GRFYGKFSGFSKHALKTDIMNVLEGCSLTSDDLKFNYPRGGNLTPAAVFVQFPSLSAYDK 120

Query: 124 AFRVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATS 183
           A R I ++G++YRLE+A R+QWD + PY GK V L GIP NA  DD++RFLSGC Y   S
Sbjct: 121 ALRNIAKKGKLYRLEKAARAQWDPIVPYEGKVVALHGIPVNAITDDIDRFLSGCLYYPGS 180

Query: 184 INMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 228
           I       +    R+A V F S TQAM+A++TKNR F LN +I ++VLQ
Sbjct: 181 IQFLTVQGLGTSKRVALVRFTSQTQAMNAYITKNRNFLLNQRITLQVLQ 228

[Close]

BLAST of Cp4.1LG10g08990 vs. TAIR 10
Match: AT5G02740.2 (Ribosomal protein S24e family protein )

HSP 1 Score: 148.3 bits (373), Expect = 7.5e-36
Identity = 81/181 (44.75%), Postives = 109/181 (60.22%), Query Frame = 0


Query: 4   LNLLRKALGSHFISRSATP---NHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGAT 63
           +++ R A+ S    R   P      LP F ++  +  ST  EQ PP S        S   
Sbjct: 1   MSITRSAIRSSLCLRKLDPEISRSSLP-FLQEWRKCLSTATEQPPPASPLPPPPGGSPGE 60

Query: 64  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNR--SFTPTSMMMQFPSRKAYDN 123
           G  YGK  G +++ LKTDI+N+LEGC+L+ DD+K  Y R  + TP ++ +QFPS  AYD 
Sbjct: 61  GRFYGKFSGFSKHALKTDIMNVLEGCSLTSDDLKFNYPRGGNLTPAAVFVQFPSLSAYDK 120

Query: 124 AFRVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATS 180
           A R I ++G++YRLE+A R+QWD + PY GK V L GIP NA  DD++RFLSGC Y   S
Sbjct: 121 ALRNIAKKGKLYRLEKAARAQWDPIVPYEGKVVALHGIPVNAITDDIDRFLSGCLYYPGS 180

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g08990 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG10g08990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023544682.1	3.25e-161	100.00	uncharacterized protein LOC111804194 [Cucurbita pepo subsp. pepo]	[more]
XP_022949855.1	8.24e-155	96.48	uncharacterized protein LOC111453126 [Cucurbita moschata]	[more]
XP_022977775.1	2.76e-153	95.59	uncharacterized protein LOC111477976 [Cucurbita maxima]	[more]
XP_022972751.1	8.71e-141	87.67	uncharacterized protein LOC111471264 [Cucurbita maxima]	[more]
XP_023518188.1	3.98e-138	86.34	uncharacterized protein LOC111781730 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG10g08990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GDZ1	3.99e-155	96.48	uncharacterized protein LOC111453126 OS=Cucurbita moschata OX=3662 GN=LOC1114531...	[more]
A0A6J1INA4	1.34e-153	95.59	uncharacterized protein LOC111477976 OS=Cucurbita maxima OX=3661 GN=LOC111477976...	[more]
A0A6J1I6U3	4.22e-141	87.67	uncharacterized protein LOC111471264 OS=Cucurbita maxima OX=3661 GN=LOC111471264...	[more]
A0A6J1HGY5	2.72e-137	85.90	uncharacterized protein LOC111463377 OS=Cucurbita moschata OX=3662 GN=LOC1114633...	[more]
A0A6J1CQY2	1.28e-133	83.84	uncharacterized protein LOC111013764 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Cp4.1LG10g08990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02740.1	1.2e-46	44.54	Ribosomal protein S24e family protein	[more]
AT5G02740.2	7.5e-36	44.75	Ribosomal protein S24e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48167	EXPRESSED PROTEIN	coord: 7..227
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 144..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g08990.1	Cp4.1LG10g08990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding