Cp4.1LG10g08870 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g08870
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Pectate lyase
Location	Cp4.1LG10: 4867563 .. 4871563 (+)
RNA-Seq Expression	Cp4.1LG10g08870
Synteny	Cp4.1LG10g08870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGCAAGGTAGAAGACGATGACCTTTTTCCAGAGAGGAGAAAGGGCTCAAAGCCCCCCTCCACCATAACCGACCATTCAGCTTTCACTGCAACAATTTTTACAGGCAAGCTTTGATCCGATCCGATCCGATCCCATTAAAAGCTCCAAAGCCCATGATCACCGCTAGCATCTCAACCATGGCGTAAATGCCTCTCGACCCACCAACGCTCATTCTCTCCCCATTAAATATAACCCATTTCTCGGAACTCTGCCCCGACAGTCAAGATGGAATCCTTACCCTACGCCCACGTTGATTCGAGCCTTCGAGCCCTCGCCGGTCAGGCCGAGGGCTTTGGCCGTTCTGCCATTGGTGGTCTTTATGGCTCTGTTTATTGTGTCACTAATTTAGCAGGTCGTATTTTCTTTATCCCATTTTTTTATGTATTTGGTTTGATTGTTTGATGTTGGGATTGGAATTTAATTAGTTGTTGAGACTTTCTTACATTAGGCACATGAATGATCTCTAAGTTCTCTGTTGTTTGGCTTTGTTTTTGGTTATTTTCCCTTTTTTGTATGCTTTGTTAGGCGAGTGGGGGGAAGAACTGAAGTTCTTTTTGAGAAATCTAGCAATCATAAGGGCTAGGGAGTTGGATTTTGGATTCTGCATTCTTTACCTATGCCTTGTTGAGATGTATTCATGAGTTTGTGAGATCCTACGTCGATTGGAGAGGGGAACGGGTATGGAAATCTCTCCCTAAGGGACGTGTTTTTAAAATTTTGAGGGAAAGTCCTAAGAGGACAATATTTGTTAGGGGTGGGCTTCGGTTGTTACCAATGGTATCAAAGCCATCAACTTTGAGCCCCAAAGGGGGAGGATTGTGAAATCCCACGTTGATTGGAGAGGGGAACGAAACATTCCTTATAAGAGTATGGAAACCTCTATGTGATATCCTACATCGGTTGGAGAAGGGAACGAAACATTCTTTATAAGGGTGTGAAAACTTCTTTCTAGCAAACGCATTTTAAAAACCTTGAGGAGAAACCTAGAAGAGAAGACCCAAAGAGGACGAAACATTCTTTATAATGGTGTGGAAACCTCTCTCTAACAGACGCGTTTTAAAAGCCTTGAGGGAAAATTCAGAAGAGAAAACCCAAAGATGAGAATATCTGCTAACGGTGAGTTTTGACTGTACAAATGGTACAAAGCCTGACATCGGGTTGTGTGCCAACGAGGACGCTAGGCCCTGAAGGGTGTGAATTGTGAGATCCCACATCGGTTGGAGAGAGGAACGAAGCATTCTTTATAAAGGTATGGAAACCTCTCCCTAGCATACGCGTTTTAAAAACCTTGAAGGAAAACCTAGAAAAGGAAACTCAAAGATGACAATATTTGCTAACGGTGGGTTTGGGCTGTTACAAATGGTATCAAAGCCAGACACCAGGCGGTATGCCAATAAAGGACGCTAGGCCTTGAAGGGTGTGAATTGTGAGATCCCACATCAGTTGGATAGAGGAACGAAGCATTCTTTATAAAGGTTTGAAAACCTCTCCCTAGCATACGCGTTTTAAAAACCTTGAAAGAAAACTCGGAAGAGAAAACCCAAAGAGGACAATATCCGCTAGTGGTGGGTTTAGGTTGTTACACTCTCCCTAGCGGATGCGTTGGGTATCTGCTAGTGGTGGGCTTGAGTTGTTACATATACACCGTATACATTACTTCTATTTAGTTCTGTCTTTCAGTTCTCTAAGAAATCTTTACATCAGTACTTTCTCATTGTTGTAGATGATGGTCCGGGATCGCTTAGGTCCGGGTGTCGTATGAAAGAGCCCCTTTGGATTATCTTTGAAGTTTCAGGCACAATTCACTTGTCGACATTTCTTAGTGTGTCATCGTATAAAACTGTAGATGGTCGTGGACAAAGGATAAAATTCACAGGAAAGGGATTGAGACTGAAAGAATGTGAGCATGTGATCATTTGCAATTTGGAGTTTGAAGGTGGTAGAGGTCATGATGTTGATGGAGTTCAAATCAAACCCAATTCAAAGCACATATGGATAGACCGTTGCAGCCTCCGAGACTATGATGATGGGTTGATTGATATCACCAGAGGAAGCACAGATATCACTATTTCTAGGTGATAGCAAGCTTCATCTAAGAGCTTTCTTGGTGCCTTAACAATCTAACATTGTGTTTATCTATAGGTGTCACTTCTCACAGCATGACAAGACGATGCTCATCGGAGCTGATCCATCCCACGTCGGCGATCGATGCATTCGTGTCACTATTCACCACTGTTTTTTCGATGGTACTCGGCAACGGCATCCTCGTGTTAGATTTGCTCAAGTGCATCTATACAATAATTACACCAGAAACTGGGGGATCTATGCTGTCTGTGCTAGTGTAGAATCACAGGTCTTGTTGATTTCACTTACATTTTAGTTTGAACTTCTCCAAAGATCACTGTGATTTGAGTTTGTTGCTTGCATTTTGAATCAGATATACTCTCAGTGCAACATATACGAAGCAGGAGAGAAAAAGGTGGCATTTCGATATCTAACTGAAAAGGTAAATTTGTTCTTTAGATTATGTCTTTAATCTAATCAATACGTGATAAGATTGGGAAACTTAAAAGGATAAGGGCGTCTCTGAGATCCTACATCGGTTGGAGAGAGGAACGAAGCATTCTTTATAAGGGTGTGGAAGTCTCTCCCTAATAGACGTGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGTGAAAGCCCAAAGAGGACAATATTTGTTAGCAGTGGGATTGAGTTGTTACAAATGGTATTAGAGCCAGGTTCTGAGCGGTGTGCTAGCGAGGACGCTGAGCCCAGAAGGGGGTGGACATTGGGCGGTGTGCCAGCGACGACGCTGGACCCTGAAAGTGGCGGATGTTTGTAACAGCCCAAGCCTACCGCTAACAGATATTGTCCTCTTTGGGCTTTTTCTTTCGGGTGTCCCCTTAATGTTTTAAAACACGTTTGCTAGAGAGAGATTTCCACACCCTTATAAAGAATGTTTCGTTCCCCTTTCCAACCGATATGGGATCTTACAATTTACCCCAATCGAGGTCCAGTATCCTCGCTGCTAGTCATTTCTCTCTCCATCGAATGCCGTAGCACCTTATGTCCTGACTAACTACTAAGACCCACATGATGAAATCACTTACACACATCATGTATCCGTTCCCGCTCGCCTAACCTCCTTTCTGTGATATTTGATAACAATCAATGGCCTATTGTCTCTCTCTCTACTTGTTTGTCTGGCCCTACATCTTTCTCACTGTCTCTGTAAGATCCCACATCAGTTGAAGAGAAAAACGAAGCATTTCTTATCAAAGTGTTGAAACCTCTCCCCAACCACTAACAGACTCGTTTTAAAACCATGAGTCTAACGACGAGATGTAACAAGTCAAAACAAACAATATTTATTAGAGGTGAGTTTAGACTATTACAAGCTTTTGTTCATGCTTTCATTGCGCTCATTCATGACACACTAGTCCTCCAATGATTGGTTCATCCTTAAAAAGGACACATTCAAAAACAAAATGCCAACAACGGTACTAAACTGGAACCATGGTTGATATATGTCTGATATTATGTTCAGGCAGCAGACAAGGAAGAGCCATCAAGTGGGTGCATATGGTCCGACGGAGACTTGTTTGTAAATGGCACACAAAGCGGGCTGTCGGCGCCAACCGCCGGACCCAGCTCCTTTCATCCCTCACAACATTACACTGCCTGGACAGTGGAACCTCCAACGGATGCTCTGAAACAGATCCTCCAACTTTGTACTGGACGCCAAAACATCCAAAGCCCCACTGATCTGCCTCTTCTACCTTAGAAAATTATACAAATTACAATTTTGGTCCCCCAATTTTTATCTATTTTCATTTTCAAATTGTATCTCGTATGGTTCGAGTTTGGTAGTCTATATTAGTCGAGTTATTAAGTCATACGAACACCCCTCAAATCTAAGCAGGTTAATAAAACAATA

mRNA sequence

AACGCAAGGTAGAAGACGATGACCTTTTTCCAGAGAGGAGAAAGGGCTCAAAGCCCCCCTCCACCATAACCGACCATTCAGCTTTCACTGCAACAATTTTTACAGGCAAGCTTTGATCCGATCCGATCCGATCCCATTAAAAGCTCCAAAGCCCATGATCACCGCTAGCATCTCAACCATGGCGTAAATGCCTCTCGACCCACCAACGCTCATTCTCTCCCCATTAAATATAACCCATTTCTCGGAACTCTGCCCCGACAGTCAAGATGGAATCCTTACCCTACGCCCACGTTGATTCGAGCCTTCGAGCCCTCGCCGGTCAGGCCGAGGGCTTTGGCCGTTCTGCCATTGGTGGTCTTTATGGCTCTGTTTATTGTGTCACTAATTTAGCAGATGATGGTCCGGGATCGCTTAGGTCCGGGTGTCGTATGAAAGAGCCCCTTTGGATTATCTTTGAAGTTTCAGGCACAATTCACTTGTCGACATTTCTTAGTGTGTCATCGTATAAAACTGTAGATGGTCGTGGACAAAGGATAAAATTCACAGGAAAGGGATTGAGACTGAAAGAATGTGAGCATGTGATCATTTGCAATTTGGAGTTTGAAGGTGGTAGAGGTCATGATGTTGATGGAGTTCAAATCAAACCCAATTCAAAGCACATATGGATAGACCGTTGCAGCCTCCGAGACTATGATGATGGGTTGATTGATATCACCAGAGGAAGCACAGATATCACTATTTCTAGGTGTCACTTCTCACAGCATGACAAGACGATGCTCATCGGAGCTGATCCATCCCACGTCGGCGATCGATGCATTCGTGTCACTATTCACCACTGTTTTTTCGATGGTACTCGGCAACGGCATCCTCGTGTTAGATTTGCTCAAGTGCATCTATACAATAATTACACCAGAAACTGGGGGATCTATGCTGTCTGTGCTAGTGTAGAATCACAGATATACTCTCAGTGCAACATATACGAAGCAGGAGAGAAAAAGGTGGCATTTCGATATCTAACTGAAAAGGCAGCAGACAAGGAAGAGCCATCAAGTGGGTGCATATGGTCCGACGGAGACTTGTTTGTAAATGGCACACAAAGCGGGCTGTCGGCGCCAACCGCCGGACCCAGCTCCTTTCATCCCTCACAACATTACACTGCCTGGACAGTGGAACCTCCAACGGATGCTCTGAAACAGATCCTCCAACTTTGTACTGGACGCCAAAACATCCAAAGCCCCACTGATCTGCCTCTTCTACCTTAGAAAATTATACAAATTACAATTTTGGTCCCCCAATTTTTATCTATTTTCATTTTCAAATTGTATCTCGTATGGTTCGAGTTTGGTAGTCTATATTAGTCGAGTTATTAAGTCATACGAACACCCCTCAAATCTAAGCAGGTTAATAAAACAATA

Coding sequence (CDS)

ATGGAATCCTTACCCTACGCCCACGTTGATTCGAGCCTTCGAGCCCTCGCCGGTCAGGCCGAGGGCTTTGGCCGTTCTGCCATTGGTGGTCTTTATGGCTCTGTTTATTGTGTCACTAATTTAGCAGATGATGGTCCGGGATCGCTTAGGTCCGGGTGTCGTATGAAAGAGCCCCTTTGGATTATCTTTGAAGTTTCAGGCACAATTCACTTGTCGACATTTCTTAGTGTGTCATCGTATAAAACTGTAGATGGTCGTGGACAAAGGATAAAATTCACAGGAAAGGGATTGAGACTGAAAGAATGTGAGCATGTGATCATTTGCAATTTGGAGTTTGAAGGTGGTAGAGGTCATGATGTTGATGGAGTTCAAATCAAACCCAATTCAAAGCACATATGGATAGACCGTTGCAGCCTCCGAGACTATGATGATGGGTTGATTGATATCACCAGAGGAAGCACAGATATCACTATTTCTAGGTGTCACTTCTCACAGCATGACAAGACGATGCTCATCGGAGCTGATCCATCCCACGTCGGCGATCGATGCATTCGTGTCACTATTCACCACTGTTTTTTCGATGGTACTCGGCAACGGCATCCTCGTGTTAGATTTGCTCAAGTGCATCTATACAATAATTACACCAGAAACTGGGGGATCTATGCTGTCTGTGCTAGTGTAGAATCACAGATATACTCTCAGTGCAACATATACGAAGCAGGAGAGAAAAAGGTGGCATTTCGATATCTAACTGAAAAGGCAGCAGACAAGGAAGAGCCATCAAGTGGGTGCATATGGTCCGACGGAGACTTGTTTGTAAATGGCACACAAAGCGGGCTGTCGGCGCCAACCGCCGGACCCAGCTCCTTTCATCCCTCACAACATTACACTGCCTGGACAGTGGAACCTCCAACGGATGCTCTGAAACAGATCCTCCAACTTTGTACTGGACGCCAAAACATCCAAAGCCCCACTGATCTGCCTCTTCTACCTTAG

Protein sequence

MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRSGCRMKEPLWIIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDVDGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVGDRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTAGPSSFHPSQHYTAWTVEPPTDALKQILQLCTGRQNIQSPTDLPLLP

Homology

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BLAST of Cp4.1LG10g08870 vs. ExPASy Swiss-Prot
Match: Q9C8G4 (Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.4e-45
Identity = 106/276 (38.41%), Postives = 159/276 (57.61%), Query Frame = 0


Query: 14  RALAGQAEGFGRSAIGGLYGSVYCVTNLADD----GPGSLRSGCRMKEPLWIIFEVSGTI 73
           +ALA  A G+G++AIGG  G +Y VTN +D+     PG+LR      +PLWI F     I
Sbjct: 53  QALAHCAVGYGKAAIGGKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKPLWITFARDMVI 112

Query: 74  HLSTFLSVSSYKTVDGRGQRIKF-TGKGLRLKECEHVIICNLEFEGGR----GHDVDGVQ 133
            L + L ++SYKT+DGRG +++   G  LR+++ +HVII  +     +    G D DG++
Sbjct: 113 VLKSQLMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNGMDGDGIR 172

Query: 134 IKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVGDRCI 193
           +   S H+WID C L    DGLID+   ST +TIS  +F+QHDK ML+G D S++GD+ +
Sbjct: 173 VF-QSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDM 232

Query: 194 RVTI-HHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGEK 253
           RVTI  + F  G  +R PRVR    H+ NN    W +YA+  S    I+S+ N + A EK
Sbjct: 233 RVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEK 292

Query: 254 KVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSG 280
           + + + +T++     +       +  D+F+NG   G
Sbjct: 293 R-SSKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFG 326

[Close]

BLAST of Cp4.1LG10g08870 vs. ExPASy Swiss-Prot
Match: Q9FM66 (Putative pectate lyase 21 OS=Arabidopsis thaliana OX=3702 GN=At5g55720 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 9.7e-45
Identity = 114/293 (38.91%), Postives = 149/293 (50.85%), Query Frame = 0


Query: 16  LAGQAEGFGRSAIGGLYGSVYCVTNLADDG-----PGSLRSGCRMKEPLWIIFEVSGTIH 75
           LA  A GFGR +IGG  G  Y VT+  DD      PG+LR      +PLWIIF+    I 
Sbjct: 68  LADCAVGFGRDSIGGRAGEFYTVTDSGDDNPLNPTPGTLRYAATQDQPLWIIFDRDMVIQ 127

Query: 76  LSTFLSVSSYKTVDGRGQRIKFT-GKGLRLKECEHVIICNLEFEG------------GRG 135
           L   L V+SYKT+DGRG  ++   G  L L +  ++II NL                G  
Sbjct: 128 LKQDLQVASYKTIDGRGNNVQIAYGPCLTLYKVSNIIINNLYIHDCVPVKRNALSSLGGY 187

Query: 136 HDVDGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPS 195
            D DG+ I   S+ IWID C+L    DGLID   GSTDITIS  +   H++ ML+G    
Sbjct: 188 SDGDGISIF-ESRDIWIDHCTLEKCYDGLIDAVNGSTDITISNSYMLNHNEVMLLGHSDE 247

Query: 196 HVGDRCIRVTIHHCFF-DGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCN 255
           + GDR +RVTI   +F +G  QR PR R    H+ NN  R+W +YA+  S    I+SQ N
Sbjct: 248 YSGDRDMRVTIAFNYFGEGLVQRMPRCRHGYFHIVNNIYRDWKMYAIGGSANPTIFSQGN 307

Query: 256 IYEAGEKKVAFRYLTEKAADKEEPSSGCIW-SDGDLFVNGTQSGLSAPTAGPS 289
           ++ A   +        ++AD +E      W S+GD  VNG     S     PS
Sbjct: 308 VFIASNNQFTKEVTKRESADGDEEWKEWNWKSEGDEMVNGAFFTPSGKEDSPS 359

[Close]

BLAST of Cp4.1LG10g08870 vs. ExPASy Swiss-Prot
Match: Q93Z04 (Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.4e-42
Identity = 114/300 (38.00%), Postives = 160/300 (53.33%), Query Frame = 0


Query: 16  LAGQAEGFGRSAIGGLYGSVYCVTNLADDG-----PGSLRSGCRMKEPLWIIFEVSGTIH 75
           LA  + GFG   +GG  G +Y VT+ +D+      PG+LR G   +EPLWI+F  +  I 
Sbjct: 99  LADCSIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIR 158

Query: 76  LSTFLSVSSYKTVDGRGQRIKFTGKG-LRLKECEHVIICNLE---------FEGGRGHDV 135
           L   L ++SYKT+DGRG  +  TG G L L+  +H+II NL          FE     D 
Sbjct: 159 LKQELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHIYDCKPSAGFEKRGRSDG 218

Query: 136 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 195
           DG+ I   S+ IW+D CS+    DGLID   GST ITIS  +F+ HD+ ML+G D ++  
Sbjct: 219 DGISIF-GSQKIWVDHCSMSHCTDGLIDAVMGSTAITISNNYFTHHDEVMLLGHDDNYAP 278

Query: 196 DRCIRVTI-HHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYE 255
           D  ++VTI  + F  G  QR PR R   +H+ NN    W +YA+  S    I SQ N Y 
Sbjct: 279 DTGMQVTIAFNHFGQGLVQRMPRCRRGYIHVVNNDFTEWKMYAIGGSGNPTINSQGNRYS 338

Query: 256 AGEKKVAFRYLTEKAADKEEPS-SGCIW-SDGDLFVNG-----TQSGLSAPTAGPSSFHP 293
           A     A + +T++   K++   S   W ++GDL  NG     +  G+S+  +  SS  P
Sbjct: 339 APSDPSA-KEVTKRVDSKDDGEWSNWNWRTEGDLMENGAFFVASGEGMSSMYSKASSVDP 396

[Close]

BLAST of Cp4.1LG10g08870 vs. ExPASy Swiss-Prot
Match: Q9LTZ0 (Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 4.5e-42
Identity = 122/335 (36.42%), Postives = 168/335 (50.15%), Query Frame = 0


Query: 10  DSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDG-----PGSLRSGCRMKEPLWIIFE 69
           +++ + LA  A GFG++AIGG  G +Y VT+ A+D      PG+LR     +EPLWIIF+
Sbjct: 77  ETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPLWIIFK 136

Query: 70  VSGTIHLSTFLSVSSYKTVDGRGQRIKFT-GKGLRLKECEHVIICNLE-----------F 129
               I L   L ++S+KT+DGRG  +  T G  L++    ++II  +             
Sbjct: 137 RDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPGSGGMI 196

Query: 130 EGGRGH-------DVDGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQ 189
           + G  H       D D V I    KH+WID CSL + DDGLID   GST ITIS  H + 
Sbjct: 197 KDGPHHTGWWMQSDGDAVAIF-GGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNHMTH 256

Query: 190 HDKTMLIGADPSHVGDRCIRVTI-HHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVC 249
           HDK ML+G   S+  D+ ++VTI  + F +G  QR PR R    H+ NN   +W +YA+ 
Sbjct: 257 HDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 316

Query: 250 ASVESQIYSQCNIYEAGEKKVAFRYLTEKAADKEEPSSGCIW------SDGDLFVNGT-- 302
            S    IYSQ N + A   +        K   K E +    W      S+GD+ +NG   
Sbjct: 317 GSASPTIYSQGNRFLAPNTRF------NKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYF 376

[Close]

BLAST of Cp4.1LG10g08870 vs. ExPASy Swiss-Prot
Match: O65388 (Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2)

HSP 1 Score: 172.9 bits (437), Expect = 5.9e-42
Identity = 102/256 (39.84%), Postives = 142/256 (55.47%), Query Frame = 0


Query: 11  SSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADD----GPGSLRSGCRMKEPLWIIFEVS 70
           S+ RALA  A GFG+SA+GG YGS+Y VTN +DD     PG+LR      +PLWI F   
Sbjct: 51  SNRRALADCAVGFGKSAVGGKYGSIYVVTNPSDDPENPRPGTLRYAVIQSKPLWITFARD 110

Query: 71  GTIHLSTFLSVSSYKTVDGRGQRIKFT-GKGLRLKECEHVIICNLEF------EGGR--- 130
             I L   L ++SYKT+DGRG +++   G  + ++   HVII  +        + GR   
Sbjct: 111 MVIVLRNELIMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRS 170

Query: 131 ---------GHDVDGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHD 190
                    G D D + I  +S HIWID C      DGLID+   ST +TIS  +F+QHD
Sbjct: 171 SPTHVGSRKGSDGDAIAIF-DSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHD 230

Query: 191 KTMLIGADPSHVGDRCIRVTI-HHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCAS 243
           K ML+G + ++V D+ +RVTI  + F  G  +R PRVR    H+ NN    W +YA+  S
Sbjct: 231 KVMLLGHNDNNVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGS 290

[Close]

BLAST of Cp4.1LG10g08870 vs. NCBI nr
Match: XP_023544911.1 (probable pectate lyase 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 691 bits (1782), Expect = 3.61e-251
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0


Query: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRSGCRMKEPLW 60
           MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRSGCRMKEPLW
Sbjct: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRSGCRMKEPLW 60

Query: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120
           IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV
Sbjct: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120

Query: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180
           DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG
Sbjct: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180

Query: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240
           DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
Sbjct: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240

Query: 241 GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTAGPSSFHPSQHYTAWT 300
           GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTAGPSSFHPSQHYTAWT
Sbjct: 241 GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTAGPSSFHPSQHYTAWT 300

Query: 301 VEPPTDALKQILQLCTGRQNIQSPTDLPLLP 331
           VEPPTDALKQILQLCTGRQNIQSPTDLPLLP
Sbjct: 301 VEPPTDALKQILQLCTGRQNIQSPTDLPLLP 331

[Close]

BLAST of Cp4.1LG10g08870 vs. NCBI nr
Match: KAG7033859.1 (putative pectate lyase 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 681 bits (1757), Expect = 2.34e-247
Identity = 327/331 (98.79%), Postives = 327/331 (98.79%), Query Frame = 0


Query: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRSGCRMKEPLW 60
           MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLR GCRMKEPLW
Sbjct: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRFGCRMKEPLW 60

Query: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120
           IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV
Sbjct: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120

Query: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180
           DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG
Sbjct: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180

Query: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240
           DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
Sbjct: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240

Query: 241 GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTAGPSSFHPSQHYTAWT 300
           GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVN TQSGLSAPT GPSSFHPSQHYTAWT
Sbjct: 241 GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNDTQSGLSAPTTGPSSFHPSQHYTAWT 300

Query: 301 VEPPTDALKQILQLCTGRQNIQSPTDLPLLP 331
           VEPPTDALKQILQLCTG QNIQSPTDLPLLP
Sbjct: 301 VEPPTDALKQILQLCTGCQNIQSPTDLPLLP 331

[Close]

BLAST of Cp4.1LG10g08870 vs. NCBI nr
Match: KAG6603682.1 (putative pectate lyase 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 677 bits (1746), Expect = 1.11e-245
Identity = 326/331 (98.49%), Postives = 326/331 (98.49%), Query Frame = 0


Query: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRSGCRMKEPLW 60
           MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLR GCRMKEPLW
Sbjct: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRFGCRMKEPLW 60

Query: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120
           IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV
Sbjct: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120

Query: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180
           DGVQIKPNSKHIWIDRCSLRD DDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG
Sbjct: 121 DGVQIKPNSKHIWIDRCSLRDNDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180

Query: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240
           DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
Sbjct: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240

Query: 241 GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTAGPSSFHPSQHYTAWT 300
           GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVN TQSGLSAPTAGPSSFHP QHYTAWT
Sbjct: 241 GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNDTQSGLSAPTAGPSSFHPLQHYTAWT 300

Query: 301 VEPPTDALKQILQLCTGRQNIQSPTDLPLLP 331
           VEPPTDALKQILQLCTG QNIQSPTDLPLLP
Sbjct: 301 VEPPTDALKQILQLCTGCQNIQSPTDLPLLP 331

[Close]

BLAST of Cp4.1LG10g08870 vs. NCBI nr
Match: XP_022950402.1 (probable pectate lyase 4 [Cucurbita moschata])

HSP 1 Score: 675 bits (1741), Expect = 6.43e-245
Identity = 326/331 (98.49%), Postives = 326/331 (98.49%), Query Frame = 0


Query: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRSGCRMKEPLW 60
           MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLR GCRMKEPLW
Sbjct: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRFGCRMKEPLW 60

Query: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120
           IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV
Sbjct: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120

Query: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180
           DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG
Sbjct: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180

Query: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240
           DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
Sbjct: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240

Query: 241 GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTAGPSSFHPSQHYTAWT 300
           GEKKVAFRYLTEKAADKEEPSSGCI SDGDLFVN TQSGLSAPTAGPSSFHPSQHYTAWT
Sbjct: 241 GEKKVAFRYLTEKAADKEEPSSGCIRSDGDLFVNDTQSGLSAPTAGPSSFHPSQHYTAWT 300

Query: 301 VEPPTDALKQILQLCTGRQNIQSPTDLPLLP 331
           VEPPTDALKQILQLCTG QNI SPTDLPLLP
Sbjct: 301 VEPPTDALKQILQLCTGCQNIPSPTDLPLLP 331

[Close]

BLAST of Cp4.1LG10g08870 vs. NCBI nr
Match: XP_022978390.1 (probable pectate lyase 4 [Cucurbita maxima])

HSP 1 Score: 673 bits (1737), Expect = 2.62e-244
Identity = 323/331 (97.58%), Postives = 325/331 (98.19%), Query Frame = 0


Query: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRSGCRMKEPLW 60
           MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLR GCR+KEPLW
Sbjct: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRFGCRLKEPLW 60

Query: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120
           IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV
Sbjct: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120

Query: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180
           DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG
Sbjct: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180

Query: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240
           DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
Sbjct: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240

Query: 241 GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTAGPSSFHPSQHYTAWT 300
           GEKKVAFRYL EKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPT G SSFHPSQHYTAWT
Sbjct: 241 GEKKVAFRYLAEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTTGHSSFHPSQHYTAWT 300

Query: 301 VEPPTDALKQILQLCTGRQNIQSPTDLPLLP 331
           VEPPTDALKQILQLCTG QNIQ+PTDLPL P
Sbjct: 301 VEPPTDALKQILQLCTGCQNIQTPTDLPLPP 331

[Close]

BLAST of Cp4.1LG10g08870 vs. ExPASy TrEMBL
Match: A0A6J1GEQ3 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111453514 PE=3 SV=1)

HSP 1 Score: 675 bits (1741), Expect = 3.12e-245
Identity = 326/331 (98.49%), Postives = 326/331 (98.49%), Query Frame = 0


Query: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRSGCRMKEPLW 60
           MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLR GCRMKEPLW
Sbjct: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRFGCRMKEPLW 60

Query: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120
           IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV
Sbjct: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120

Query: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180
           DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG
Sbjct: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180

Query: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240
           DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
Sbjct: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240

Query: 241 GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTAGPSSFHPSQHYTAWT 300
           GEKKVAFRYLTEKAADKEEPSSGCI SDGDLFVN TQSGLSAPTAGPSSFHPSQHYTAWT
Sbjct: 241 GEKKVAFRYLTEKAADKEEPSSGCIRSDGDLFVNDTQSGLSAPTAGPSSFHPSQHYTAWT 300

Query: 301 VEPPTDALKQILQLCTGRQNIQSPTDLPLLP 331
           VEPPTDALKQILQLCTG QNI SPTDLPLLP
Sbjct: 301 VEPPTDALKQILQLCTGCQNIPSPTDLPLLP 331

[Close]

BLAST of Cp4.1LG10g08870 vs. ExPASy TrEMBL
Match: A0A6J1IPY9 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111478392 PE=3 SV=1)

HSP 1 Score: 673 bits (1737), Expect = 1.27e-244
Identity = 323/331 (97.58%), Postives = 325/331 (98.19%), Query Frame = 0


Query: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRSGCRMKEPLW 60
           MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLR GCR+KEPLW
Sbjct: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRFGCRLKEPLW 60

Query: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120
           IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV
Sbjct: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120

Query: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180
           DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG
Sbjct: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180

Query: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240
           DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
Sbjct: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240

Query: 241 GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTAGPSSFHPSQHYTAWT 300
           GEKKVAFRYL EKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPT G SSFHPSQHYTAWT
Sbjct: 241 GEKKVAFRYLAEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTTGHSSFHPSQHYTAWT 300

Query: 301 VEPPTDALKQILQLCTGRQNIQSPTDLPLLP 331
           VEPPTDALKQILQLCTG QNIQ+PTDLPL P
Sbjct: 301 VEPPTDALKQILQLCTGCQNIQTPTDLPLPP 331

[Close]

BLAST of Cp4.1LG10g08870 vs. ExPASy TrEMBL
Match: A0A5A7TWJ1 (Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001550 PE=3 SV=1)

HSP 1 Score: 621 bits (1601), Expect = 3.63e-223
Identity = 296/331 (89.43%), Postives = 310/331 (93.66%), Query Frame = 0


Query: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRSGCRMKEPLW 60
           MESLPY HVDSSLRALA QAEGFGRSAIGGL+GSVYCVTNL+DDGPGSLR GCRMKEPLW
Sbjct: 46  MESLPYPHVDSSLRALAAQAEGFGRSAIGGLHGSVYCVTNLSDDGPGSLRFGCRMKEPLW 105

Query: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120
           IIFEVSGTI LS+++SVSSYKTVDGRGQRIK TGKGLRLKECEHVIICNLEFEGGRGHDV
Sbjct: 106 IIFEVSGTIDLSSYVSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDV 165

Query: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180
           DG+QIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRC+FS HDKTMLIGADPSH+G
Sbjct: 166 DGIQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCYFSHHDKTMLIGADPSHIG 225

Query: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240
           DRCIRVTIHHCFFDGTRQRHPRVR+AQVHLYNNYTRNWGIYAVCASVES+IYSQCNIYEA
Sbjct: 226 DRCIRVTIHHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEA 285

Query: 241 GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTAGPSSFHPSQHYTAWT 300
           GEKKVAF+YLTEKA DKEEPSSG IWSDGDLFV GTQSGL APTA  + FHPS+HYT WT
Sbjct: 286 GEKKVAFKYLTEKATDKEEPSSGTIWSDGDLFVKGTQSGLLAPTAEHNMFHPSEHYTNWT 345

Query: 301 VEPPTDALKQILQLCTGRQNIQSPTDLPLLP 331
           VEP TDALK ILQ CTG QNI  PTD PL+P
Sbjct: 346 VEPATDALKHILQHCTGCQNIPRPTDQPLVP 376

[Close]

BLAST of Cp4.1LG10g08870 vs. ExPASy TrEMBL
Match: A0A1S3BGV0 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103489868 PE=3 SV=1)

HSP 1 Score: 621 bits (1601), Expect = 3.63e-223
Identity = 296/331 (89.43%), Postives = 310/331 (93.66%), Query Frame = 0


Query: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRSGCRMKEPLW 60
           MESLPY HVDSSLRALA QAEGFGRSAIGGL+GSVYCVTNL+DDGPGSLR GCRMKEPLW
Sbjct: 46  MESLPYPHVDSSLRALAAQAEGFGRSAIGGLHGSVYCVTNLSDDGPGSLRFGCRMKEPLW 105

Query: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120
           IIFEVSGTI LS+++SVSSYKTVDGRGQRIK TGKGLRLKECEHVIICNLEFEGGRGHDV
Sbjct: 106 IIFEVSGTIDLSSYVSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDV 165

Query: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180
           DG+QIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRC+FS HDKTMLIGADPSH+G
Sbjct: 166 DGIQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCYFSHHDKTMLIGADPSHIG 225

Query: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240
           DRCIRVTIHHCFFDGTRQRHPRVR+AQVHLYNNYTRNWGIYAVCASVES+IYSQCNIYEA
Sbjct: 226 DRCIRVTIHHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEA 285

Query: 241 GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTAGPSSFHPSQHYTAWT 300
           GEKKVAF+YLTEKA DKEEPSSG IWSDGDLFV GTQSGL APTA  + FHPS+HYT WT
Sbjct: 286 GEKKVAFKYLTEKATDKEEPSSGTIWSDGDLFVKGTQSGLLAPTAEHNMFHPSEHYTNWT 345

Query: 301 VEPPTDALKQILQLCTGRQNIQSPTDLPLLP 331
           VEP TDALK ILQ CTG QNI  PTD PL+P
Sbjct: 346 VEPATDALKHILQHCTGCQNIPRPTDQPLVP 376

[Close]

BLAST of Cp4.1LG10g08870 vs. ExPASy TrEMBL
Match: A0A6J1HFI4 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111463488 PE=3 SV=1)

HSP 1 Score: 620 bits (1600), Expect = 5.15e-223
Identity = 293/331 (88.52%), Postives = 313/331 (94.56%), Query Frame = 0


Query: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRSGCRMKEPLW 60
           MESLPYA VDS LRALAGQAEGFGR+AIGGL+GSVYCVTNL DDGPGSLR GCRMKEPLW
Sbjct: 46  MESLPYALVDSRLRALAGQAEGFGRAAIGGLHGSVYCVTNLEDDGPGSLRFGCRMKEPLW 105

Query: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120
           IIFEVSGTIHLS++L+VSS+KTVDGRGQRIK TGKGLRLKECEHVIICNLEFEGGRGHD+
Sbjct: 106 IIFEVSGTIHLSSYLNVSSFKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDI 165

Query: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180
           DG+QIKPNS+HIWIDRCSL+DYDDGLIDITRGSTDITISRC FS+HDKTMLIGADPSHVG
Sbjct: 166 DGIQIKPNSRHIWIDRCSLQDYDDGLIDITRGSTDITISRCRFSRHDKTMLIGADPSHVG 225

Query: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240
           DRCIRVTIHHCFFDGTRQRHPRVR+ +VHLYNNYTRNWGIYAVCASVESQI+SQCNIYEA
Sbjct: 226 DRCIRVTIHHCFFDGTRQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIHSQCNIYEA 285

Query: 241 GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTAGPSSFHPSQHYTAWT 300
           G+KKVAF+YLTEKA DKEEPSSGCIWS+GDLFV+GTQSGL A TAG S FHPS HY+AWT
Sbjct: 286 GQKKVAFKYLTEKATDKEEPSSGCIWSEGDLFVSGTQSGLLAATAGQSMFHPSDHYSAWT 345

Query: 301 VEPPTDALKQILQLCTGRQNIQSPTDLPLLP 331
           VEPPTDALKQILQ CTG QNI  P DLPL+P
Sbjct: 346 VEPPTDALKQILQHCTGCQNIPRPCDLPLVP 376

[Close]

BLAST of Cp4.1LG10g08870 vs. TAIR 10
Match: AT3G55140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 537.7 bits (1384), Expect = 6.4e-153
Identity = 244/326 (74.85%), Postives = 282/326 (86.50%), Query Frame = 0


Query: 1   MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRSGCRMKEPLW 60
           M SLPYA  D SLRALAG+AEGFGR A+GGL+G +Y VT+LADDGPG+LR G R KEPLW
Sbjct: 1   MTSLPYADADCSLRALAGRAEGFGRFAVGGLHGDLYVVTSLADDGPGTLREGGRRKEPLW 60

Query: 61  IIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDV 120
           I+F VSGTI+L+++LSVSSYKT+DGRGQRIK TGKG+RLKECEH+IICNLEFEGGRGHDV
Sbjct: 61  IVFAVSGTINLNSYLSVSSYKTIDGRGQRIKLTGKGIRLKECEHIIICNLEFEGGRGHDV 120

Query: 121 DGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVG 180
           DG+QIKP S+HIWIDRCSLRDYDDGLIDITR STDIT+SRC+F+QHDKTMLIGADPSHV 
Sbjct: 121 DGIQIKPKSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFAQHDKTMLIGADPSHVE 180

Query: 181 DRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240
           DRCIRVTIHHCFFDGTRQR PR+RF +VHLYNNYTRNWGIYAVCASVE+Q++SQCNIYEA
Sbjct: 181 DRCIRVTIHHCFFDGTRQRQPRLRFGKVHLYNNYTRNWGIYAVCASVEAQVFSQCNIYEA 240

Query: 241 GEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTAGPSSFHPSQHYTAWT 300
           G KK  F Y +EKAADKEE  +G + S+ DLF+NG Q  L    +    FHPS+HY  WT
Sbjct: 241 GVKKKTFEYYSEKAADKEEARTGLVRSENDLFLNGAQPSLMTGASEECVFHPSEHYPTWT 300

Query: 301 VEPPTDALKQILQLCTGRQNIQSPTD 327
           VEPP++ LKQI+Q+CTG Q++  P+D
Sbjct: 301 VEPPSETLKQIMQICTGWQSLSRPSD 326

[Close]

BLAST of Cp4.1LG10g08870 vs. TAIR 10
Match: AT3G09540.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 484.6 bits (1246), Expect = 6.5e-137
Identity = 229/324 (70.68%), Postives = 268/324 (82.72%), Query Frame = 0


Query: 5   PYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRSGCRMKEPLWIIFE 64
           PY HVDSSLR+LAG+AEGFGR+A+GGL G +  VT+LAD+GPGSLR  C+  EPLWI+F+
Sbjct: 52  PYCHVDSSLRSLAGKAEGFGRAAVGGLNGPICHVTSLADEGPGSLREACKRPEPLWIVFD 111

Query: 65  VSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDVDGVQ 124
           VSGTI+LS+F++VSS+ TVDGRGQ++K TGKGLRLKECE+VIICNLEFEGG G D D +Q
Sbjct: 112 VSGTINLSSFVNVSSHTTVDGRGQKVKITGKGLRLKECENVIICNLEFEGGVGPDADAIQ 171

Query: 125 IKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVGDRCI 184
           IKP S +IWIDRCSL++Y DGLIDITR STDIT+SRCHF  H+KTMLIGAD SHV DRCI
Sbjct: 172 IKPKSHNIWIDRCSLKNYYDGLIDITRESTDITVSRCHFMNHNKTMLIGADTSHVTDRCI 231

Query: 185 RVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGEKK 244
           RVTIHHCFFDGTRQRHPRVRFA+VHL+NNYTR+W IYAV A VESQI+SQCNIYEAGEKK
Sbjct: 232 RVTIHHCFFDGTRQRHPRVRFAKVHLFNNYTRHWAIYAVGAGVESQIHSQCNIYEAGEKK 291

Query: 245 VAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLSAPTAGPSSFHPSQHYTAWTVEPP 304
             F+Y+TEKAADKE+P +G + S+GDL +NG +S LS        F P QHY+ WTVE P
Sbjct: 292 TVFKYITEKAADKEKPGAGFVRSEGDLLLNGAKSCLS-QGGERYVFSPIQHYSEWTVESP 351

Query: 305 TDALKQILQLCTGRQNIQSPTDLP 329
           TD LK  L+  TG QN+  P D P
Sbjct: 352 TDILKNYLKHSTGWQNLPLPLDRP 374

[Close]

BLAST of Cp4.1LG10g08870 vs. TAIR 10
Match: AT3G55140.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 479.2 bits (1232), Expect = 2.7e-135
Identity = 214/286 (74.83%), Postives = 248/286 (86.71%), Query Frame = 0


Query: 41  LADDGPGSLRSGCRMKEPLWIIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLK 100
           + DDGPG+LR G R KEPLWI+F VSGTI+L+++LSVSSYKT+DGRGQRIK TGKG+RLK
Sbjct: 17  ILDDGPGTLREGGRRKEPLWIVFAVSGTINLNSYLSVSSYKTIDGRGQRIKLTGKGIRLK 76

Query: 101 ECEHVIICNLEFEGGRGHDVDGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISR 160
           ECEH+IICNLEFEGGRGHDVDG+QIKP S+HIWIDRCSLRDYDDGLIDITR STDIT+SR
Sbjct: 77  ECEHIIICNLEFEGGRGHDVDGIQIKPKSRHIWIDRCSLRDYDDGLIDITRQSTDITVSR 136

Query: 161 CHFSQHDKTMLIGADPSHVGDRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGI 220
           C+F+QHDKTMLIGADPSHV DRCIRVTIHHCFFDGTRQR PR+RF +VHLYNNYTRNWGI
Sbjct: 137 CYFAQHDKTMLIGADPSHVEDRCIRVTIHHCFFDGTRQRQPRLRFGKVHLYNNYTRNWGI 196

Query: 221 YAVCASVESQIYSQCNIYEAGEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGL 280
           YAVCASVE+Q++SQCNIYEAG KK  F Y +EKAADKEE  +G + S+ DLF+NG Q  L
Sbjct: 197 YAVCASVEAQVFSQCNIYEAGVKKKTFEYYSEKAADKEEARTGLVRSENDLFLNGAQPSL 256

Query: 281 SAPTAGPSSFHPSQHYTAWTVEPPTDALKQILQLCTGRQNIQSPTD 327
               +    FHPS+HY  WTVEPP++ LKQI+Q+CTG Q++  P+D
Sbjct: 257 MTGASEECVFHPSEHYPTWTVEPPSETLKQIMQICTGWQSLSRPSD 302

[Close]

BLAST of Cp4.1LG10g08870 vs. TAIR 10
Match: AT1G30350.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 5.3e-46
Identity = 106/276 (38.41%), Postives = 159/276 (57.61%), Query Frame = 0


Query: 14  RALAGQAEGFGRSAIGGLYGSVYCVTNLADD----GPGSLRSGCRMKEPLWIIFEVSGTI 73
           +ALA  A G+G++AIGG  G +Y VTN +D+     PG+LR      +PLWI F     I
Sbjct: 53  QALAHCAVGYGKAAIGGKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKPLWITFARDMVI 112

Query: 74  HLSTFLSVSSYKTVDGRGQRIKF-TGKGLRLKECEHVIICNLEFEGGR----GHDVDGVQ 133
            L + L ++SYKT+DGRG +++   G  LR+++ +HVII  +     +    G D DG++
Sbjct: 113 VLKSQLMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNGMDGDGIR 172

Query: 134 IKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVGDRCI 193
           +   S H+WID C L    DGLID+   ST +TIS  +F+QHDK ML+G D S++GD+ +
Sbjct: 173 VF-QSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDM 232

Query: 194 RVTI-HHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGEK 253
           RVTI  + F  G  +R PRVR    H+ NN    W +YA+  S    I+S+ N + A EK
Sbjct: 233 RVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEK 292

Query: 254 KVAFRYLTEKAADKEEPSSGCIWSDGDLFVNGTQSG 280
           + + + +T++     +       +  D+F+NG   G
Sbjct: 293 R-SSKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFG 326

[Close]

BLAST of Cp4.1LG10g08870 vs. TAIR 10
Match: AT5G55720.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 182.2 bits (461), Expect = 6.9e-46
Identity = 114/293 (38.91%), Postives = 149/293 (50.85%), Query Frame = 0


Query: 16  LAGQAEGFGRSAIGGLYGSVYCVTNLADDG-----PGSLRSGCRMKEPLWIIFEVSGTIH 75
           LA  A GFGR +IGG  G  Y VT+  DD      PG+LR      +PLWIIF+    I 
Sbjct: 68  LADCAVGFGRDSIGGRAGEFYTVTDSGDDNPLNPTPGTLRYAATQDQPLWIIFDRDMVIQ 127

Query: 76  LSTFLSVSSYKTVDGRGQRIKFT-GKGLRLKECEHVIICNLEFEG------------GRG 135
           L   L V+SYKT+DGRG  ++   G  L L +  ++II NL                G  
Sbjct: 128 LKQDLQVASYKTIDGRGNNVQIAYGPCLTLYKVSNIIINNLYIHDCVPVKRNALSSLGGY 187

Query: 136 HDVDGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPS 195
            D DG+ I   S+ IWID C+L    DGLID   GSTDITIS  +   H++ ML+G    
Sbjct: 188 SDGDGISIF-ESRDIWIDHCTLEKCYDGLIDAVNGSTDITISNSYMLNHNEVMLLGHSDE 247

Query: 196 HVGDRCIRVTIHHCFF-DGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCN 255
           + GDR +RVTI   +F +G  QR PR R    H+ NN  R+W +YA+  S    I+SQ N
Sbjct: 248 YSGDRDMRVTIAFNYFGEGLVQRMPRCRHGYFHIVNNIYRDWKMYAIGGSANPTIFSQGN 307

Query: 256 IYEAGEKKVAFRYLTEKAADKEEPSSGCIW-SDGDLFVNGTQSGLSAPTAGPS 289
           ++ A   +        ++AD +E      W S+GD  VNG     S     PS
Sbjct: 308 VFIASNNQFTKEVTKRESADGDEEWKEWNWKSEGDEMVNGAFFTPSGKEDSPS 359

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g08870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8G4	7.4e-45	38.41	Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1	[more]
Q9FM66	9.7e-45	38.91	Putative pectate lyase 21 OS=Arabidopsis thaliana OX=3702 GN=At5g55720 PE=3 SV=1	[more]
Q93Z04	3.4e-42	38.00	Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1	[more]
Q9LTZ0	4.5e-42	36.42	Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2	[more]
O65388	5.9e-42	39.84	Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2	[more]

BLAST of Cp4.1LG10g08870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023544911.1	3.61e-251	100.00	probable pectate lyase 4 [Cucurbita pepo subsp. pepo]	[more]
KAG7033859.1	2.34e-247	98.79	putative pectate lyase 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6603682.1	1.11e-245	98.49	putative pectate lyase 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022950402.1	6.43e-245	98.49	probable pectate lyase 4 [Cucurbita moschata]	[more]
XP_022978390.1	2.62e-244	97.58	probable pectate lyase 4 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG10g08870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEQ3	3.12e-245	98.49	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111453514 PE=3 SV=1	[more]
A0A6J1IPY9	1.27e-244	97.58	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111478392 PE=3 SV=1	[more]
A0A5A7TWJ1	3.63e-223	89.43	Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001550...	[more]
A0A1S3BGV0	3.63e-223	89.43	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103489868 PE=3 SV=1	[more]
A0A6J1HFI4	5.15e-223	88.52	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111463488 PE=3 SV=1	[more]

BLAST of Cp4.1LG10g08870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55140.1	6.4e-153	74.85	Pectin lyase-like superfamily protein	[more]
AT3G09540.1	6.5e-137	70.68	Pectin lyase-like superfamily protein	[more]
AT3G55140.2	2.7e-135	74.83	Pectin lyase-like superfamily protein	[more]
AT1G30350.1	5.3e-46	38.41	Pectin lyase-like superfamily protein	[more]
AT5G55720.1	6.9e-46	38.91	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 74..90 score: 49.58 coord: 19..36 score: 50.0 coord: 221..240 score: 38.57
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 31..244 e-value: 3.5E-33 score: 126.2
IPR002022	Pectate lyase	PFAM	PF00544	Pectate_lyase_4	coord: 75..237 e-value: 6.0E-26 score: 91.3
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 6..311 e-value: 1.9E-91 score: 308.6
None	No IPR available	PANTHER	PTHR31683:SF113	PECTATE LYASE	coord: 1..324
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 1..324
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 17..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g08870.1	Cp4.1LG10g08870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0045490	pectin catabolic process
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0030570	pectate lyase activity
molecular_function	GO:0008270	zinc ion binding