Cp4.1LG10g08850 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g08850
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Actin-depolymerizing factor
Location	Cp4.1LG10: 4925298 .. 4927407 (+)
RNA-Seq Expression	Cp4.1LG10g08850
Synteny	Cp4.1LG10g08850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAACAGAAAAAGGTTTAACCTGGCTTTTTCTTGGAGCCGACTTCAAGAAAAGGAAGAGAAGCTCATCATCGTTTCCAACAGGGTTTTTGCAGTTTACACCAACACGATACGCTCCTCTGTTATTTGAATCACTCCCCACCATAATTACCACTCCCAACCACCCAATATAACCTTTCCCCCGCATTCACTCATTCATTCCTCTCTTCTCTTCATTCTTCGATTTCACTGTTGTTTGAGTTCTTCCGCAAGCATCCACGGAGAGAAAATGGTAACCCTTCGATTCATTTGCTTCATTTGTAGCTTCCCAAGTGTTTGATTAAATGACCTGCTCTGTTTCTGTGGAAGTTCTGGGAAATTGCTGGAATGGGTTTCTGGGAAATGTGGTTTTGTTGATTAGCTTCTCTTTTGGTTCTATTTGGTGTTTGATCTGTGGTTCTGACTTGACTGGAATTATTTGAATGTGTTTGGATTTGGTTGATTTATAATAATAGTTCATGAATTGTTTTGGTGTGTAATGAATTGCTCTGAGATCTTGGGATATGATCTGGTTTGTGTTGGAATGATTTTATGTTTGAAACTATTGGATGGTTTAGTTTTATGATCGGTCGAGATAGAGAATTTCCATCTGGTTCTGTATCCATTGCTCTTATCTAAATTATCTCTTGTGATGAACAGGGGTCCTCCTTTTAGTATTTTACTTCTCCCCTCCCCCCTTTTAGATTCAATCTTCCTTTCAAAGTTGTATGGAGTTTTGTTGTTGCTACGAGGCACCCACCGCTCGTAGATATTCTCTGCTTTGACCCGTTACGTATTTTCATTAACTTTGTTAGGGAAATGTTTCCACACTCTTACAAGAATGCCTCCTTTTCCTCTCCAACTTATGTGTGATCGCACAATCCACACTCTTACGTATTGCTGATGGCGATACATCATAGGCTAAAGCGGACAATACTTATTGACAATGGGCTTGAGTTGTTAGATGAAGTGTGTGTGTTTTGGGTGTCAGCCAACCTTCTCAGCGATACGTAACGGTATAAACCAGATAATATCTACTAGCGGTGGGCTTGAGTTGTTACGAGCGATAGGGAATGGGTGGGCTTGAATTGAATTGTTACATGAATGTGTGTGTTTTGTGTGTCAGTCAACCTTCTCTTTTATTGCATAATCTTGTCTTCAATTTAGAAGATACTTTAAAAGGTGATCAAATATTACAAACTTAGCTTAGTTCTTACAACCCAAAATATGTTCATAAAAGTATACTTTCATGAATCTGGTAGGCCAATGCAGCATCAGGAATGGCTGTGAATGATGAATGCAAGTTAAAGTTTCTAGAGCTCAAGTCGAAAAGAACTCATCGTTTCATTATCTTTAAGATCGAGGAGAAGCTAAAGCAAGTAGTTGTGGAGAAACTCGGTGGGCCTAGCCAAAGTTACGAGGATTTTGCTGCTAGTCTCCCTACCGATGAGTGTCGTTATGCTGTCTATGATTTCGACTTCGTCACCGAAGAAAATTGCCAAAAAAGCAGAATCTTCTTCATTGCATGGTAATGACAATTCTTAACCATTCAATGATTGCATACTTCATCTTATCACTGATTGAACTGTTAAATGAAGGTCTCCTGATAATTCAAGAGTCCGAAGCAAGATGATCTATGCAAGCTCCAAGGACAGATTTAAGAGAGAGCTTGATGGAATACAAGTAGAGCTGCAAGCAACCGATCCGACCGAGATGGGTCTCGATGTAATTCGTAGCCGTGCTGGAATATAAGCCTTCAAAAACGAATCGAAATGTGTAAAGATTTCACTGGAAATCTTCTGTTCTTGAACAAGTATGAATCTGTGTGTCATCTGGTATGTCTTTTAACTTGTTATGCAAAACCTTCTGTCTTGAGTGACCATTTAGAGTCTGATACCTATGAAGCTAATAGCTTGTGAGGGGTTAGCTGAGACCTTATGCTAATTTCATCTTTGTTTTTTTTTTTCAGTTTTAGTTTGGATTGCTGGCTTTACATTCTTTCTTTTGCCCAACATTATCCTCTCTACTTTTGGGTTTATTGTTGTTTTCTTTGTAAGTTGGTAGAAATTGATTGCTTGATTCTTTGATTCTT

mRNA sequence

AGAAAACAGAAAAAGGTTTAACCTGGCTTTTTCTTGGAGCCGACTTCAAGAAAAGGAAGAGAAGCTCATCATCGTTTCCAACAGGGTTTTTGCAGTTTACACCAACACGATACGCTCCTCTGTTATTTGAATCACTCCCCACCATAATTACCACTCCCAACCACCCAATATAACCTTTCCCCCGCATTCACTCATTCATTCCTCTCTTCTCTTCATTCTTCGATTTCACTGTTGTTTGAGTTCTTCCGCAAGCATCCACGGAGAGAAAATGGCCAATGCAGCATCAGGAATGGCTGTGAATGATGAATGCAAGTTAAAGTTTCTAGAGCTCAAGTCGAAAAGAACTCATCGTTTCATTATCTTTAAGATCGAGGAGAAGCTAAAGCAAGTAGTTGTGGAGAAACTCGGTGGGCCTAGCCAAAGTTACGAGGATTTTGCTGCTAGTCTCCCTACCGATGAGTGTCGTTATGCTGTCTATGATTTCGACTTCGTCACCGAAGAAAATTGCCAAAAAAGCAGAATCTTCTTCATTGCATGGTCTCCTGATAATTCAAGAGTCCGAAGCAAGATGATCTATGCAAGCTCCAAGGACAGATTTAAGAGAGAGCTTGATGGAATACAAGTAGAGCTGCAAGCAACCGATCCGACCGAGATGGGTCTCGATGTAATTCGTAGCCGTGCTGGAATATAAGCCTTCAAAAACGAATCGAAATGTGTAAAGATTTCACTGGAAATCTTCTGTTCTTGAACAAGTATGAATCTGTGTGTCATCTGGTATGTCTTTTAACTTGTTATGCAAAACCTTCTGTCTTGAGTGACCATTTAGAGTCTGATACCTATGAAGCTAATAGCTTGTGAGGGGTTAGCTGAGACCTTATGCTAATTTCATCTTTGTTTTTTTTTTTCAGTTTTAGTTTGGATTGCTGGCTTTACATTCTTTCTTTTGCCCAACATTATCCTCTCTACTTTTGGGTTTATTGTTGTTTTCTTTGTAAGTTGGTAGAAATTGATTGCTTGATTCTTTGATTCTT

Coding sequence (CDS)

ATGGCCAATGCAGCATCAGGAATGGCTGTGAATGATGAATGCAAGTTAAAGTTTCTAGAGCTCAAGTCGAAAAGAACTCATCGTTTCATTATCTTTAAGATCGAGGAGAAGCTAAAGCAAGTAGTTGTGGAGAAACTCGGTGGGCCTAGCCAAAGTTACGAGGATTTTGCTGCTAGTCTCCCTACCGATGAGTGTCGTTATGCTGTCTATGATTTCGACTTCGTCACCGAAGAAAATTGCCAAAAAAGCAGAATCTTCTTCATTGCATGGTCTCCTGATAATTCAAGAGTCCGAAGCAAGATGATCTATGCAAGCTCCAAGGACAGATTTAAGAGAGAGCTTGATGGAATACAAGTAGAGCTGCAAGCAACCGATCCGACCGAGATGGGTCTCGATGTAATTCGTAGCCGTGCTGGAATATAA

Protein sequence

MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASLPTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVIRSRAGI

Homology

[Close]

BLAST of Cp4.1LG10g08850 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 6.7e-64
Identity = 119/138 (86.23%), Postives = 131/138 (94.93%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHRFI++KIEEK KQVVVEK+G P++SYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P +ECRYAVYDFDFVT ENCQKSRIFFIAW PD +RVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQA DPTEMGLDVI+SRA
Sbjct: 121 LQACDPTEMGLDVIQSRA 138

[Close]

BLAST of Cp4.1LG10g08850 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 6.7e-64
Identity = 120/139 (86.33%), Postives = 131/139 (94.24%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKLKFLELK+KRT+RFII+KIEEK K+VVVEKLG P++SYEDF A L
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFDF+T+EN QKSRIFFIAWSPD +RVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAG 140
           LQATDPTEMGLDV RSRAG
Sbjct: 121 LQATDPTEMGLDVFRSRAG 139

[Close]

BLAST of Cp4.1LG10g08850 vs. ExPASy Swiss-Prot
Match: Q0DLA3 (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 PE=3 SV=2)

HSP 1 Score: 238.8 bits (608), Expect = 3.7e-62
Identity = 116/138 (84.06%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+DECKLKFLELK+KRT+RFII+KI+EK K VVVEK+G P  +Y+DFAASL
Sbjct: 1   MANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P +ECRYA++D+DFVTEENCQKS+IFFIAWSPD SRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTE+GLDVIR RA
Sbjct: 121 LQATDPTEVGLDVIRGRA 138

[Close]

BLAST of Cp4.1LG10g08850 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 8.2e-62
Identity = 115/138 (83.33%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHRFI++KIEEK KQVVVEK+G P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTEM LDV RSRA
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]

BLAST of Cp4.1LG10g08850 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 236.1 bits (601), Expect = 2.4e-61
Identity = 113/137 (82.48%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHRFI++KIEEK KQV+VEK+G P  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEM LDV++SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]

BLAST of Cp4.1LG10g08850 vs. NCBI nr
Match: XP_022949831.1 (actin-depolymerizing factor 1-like [Cucurbita moschata] >XP_023543253.1 actin-depolymerizing factor 1-like [Cucurbita pepo subsp. pepo] >KAG6603669.1 Actin-depolymerizing factor 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033848.1 Actin-depolymerizing factor 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 280 bits (715), Expect = 7.38e-95
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAGI 140
           LQATDPTEMGLDVIRSRAGI
Sbjct: 121 LQATDPTEMGLDVIRSRAGI 140

[Close]

BLAST of Cp4.1LG10g08850 vs. NCBI nr
Match: XP_022978980.1 (actin-depolymerizing factor 1-like [Cucurbita maxima])

HSP 1 Score: 278 bits (712), Expect = 2.12e-94
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELK+KRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKTKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAGI 140
           LQATDPTEMGLDVIRSRAGI
Sbjct: 121 LQATDPTEMGLDVIRSRAGI 140

[Close]

BLAST of Cp4.1LG10g08850 vs. NCBI nr
Match: XP_038881189.1 (actin-depolymerizing factor 1-like isoform X3 [Benincasa hispida] >XP_038881190.1 actin-depolymerizing factor 1-like isoform X3 [Benincasa hispida])

HSP 1 Score: 273 bits (699), Expect = 1.97e-92
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFI+FKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 138
           LQATDPTEMGLDVIRSRA
Sbjct: 121 LQATDPTEMGLDVIRSRA 138

[Close]

BLAST of Cp4.1LG10g08850 vs. NCBI nr
Match: XP_022972737.1 (actin-depolymerizing factor 1-like [Cucurbita maxima] >XP_023517168.1 actin-depolymerizing factor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 272 bits (695), Expect = 8.01e-92
Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFI+FKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSK+RFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 138
           LQATDPTEMGLDVIRSRA
Sbjct: 121 LQATDPTEMGLDVIRSRA 138

[Close]

BLAST of Cp4.1LG10g08850 vs. NCBI nr
Match: XP_022962833.1 (actin-depolymerizing factor 1-like [Cucurbita moschata])

HSP 1 Score: 272 bits (695), Expect = 8.01e-92
Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSK+RFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 138
           LQATDPTEMGLD+IRSRA
Sbjct: 121 LQATDPTEMGLDIIRSRA 138

[Close]

BLAST of Cp4.1LG10g08850 vs. ExPASy TrEMBL
Match: A0A6J1GD54 (actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453110 PE=3 SV=1)

HSP 1 Score: 280 bits (715), Expect = 3.57e-95
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAGI 140
           LQATDPTEMGLDVIRSRAGI
Sbjct: 121 LQATDPTEMGLDVIRSRAGI 140

[Close]

BLAST of Cp4.1LG10g08850 vs. ExPASy TrEMBL
Match: A0A6J1IRV5 (actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478768 PE=3 SV=1)

HSP 1 Score: 278 bits (712), Expect = 1.02e-94
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELK+KRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKTKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAGI 140
           LQATDPTEMGLDVIRSRAGI
Sbjct: 121 LQATDPTEMGLDVIRSRAGI 140

[Close]

BLAST of Cp4.1LG10g08850 vs. ExPASy TrEMBL
Match: A0A6J1I5N8 (actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471251 PE=3 SV=1)

HSP 1 Score: 272 bits (695), Expect = 3.88e-92
Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFI+FKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSK+RFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 138
           LQATDPTEMGLDVIRSRA
Sbjct: 121 LQATDPTEMGLDVIRSRA 138

[Close]

BLAST of Cp4.1LG10g08850 vs. ExPASy TrEMBL
Match: A0A6J1HFY8 (actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111463208 PE=3 SV=1)

HSP 1 Score: 272 bits (695), Expect = 3.88e-92
Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSK+RFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 138
           LQATDPTEMGLD+IRSRA
Sbjct: 121 LQATDPTEMGLDIIRSRA 138

[Close]

BLAST of Cp4.1LG10g08850 vs. ExPASy TrEMBL
Match: A0A0A0KX62 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G294380 PE=3 SV=1)

HSP 1 Score: 268 bits (686), Expect = 9.15e-91
Identity = 133/138 (96.38%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFI+FKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P +ECRYAVYDFDFVTEENCQKSRIFFIAWSPD+S+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 138
           LQATDPTEMGLDVIRSRA
Sbjct: 121 LQATDPTEMGLDVIRSRA 138

[Close]

BLAST of Cp4.1LG10g08850 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 237.7 bits (605), Expect = 5.8e-63
Identity = 115/138 (83.33%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHRFI++KIEEK KQVVVEK+G P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTEM LDV RSRA
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]

BLAST of Cp4.1LG10g08850 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 236.1 bits (601), Expect = 1.7e-62
Identity = 114/137 (83.21%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 2   ANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASLP 61
           ANAASGMAV+D+CKL+FLELK+KRTHRFI++KIEEK KQVVVEK+G P Q+YE+FAA LP
Sbjct: 13  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72

Query: 62  TDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVEL 121
            DECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 73  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132

Query: 122 QATDPTEMGLDVIRSRA 139
           QATDPTEM LDV RSRA
Sbjct: 133 QATDPTEMDLDVFRSRA 149

[Close]

BLAST of Cp4.1LG10g08850 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 236.1 bits (601), Expect = 1.7e-62
Identity = 113/137 (82.48%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHRFI++KIEEK KQV+VEK+G P  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEM LDV++SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]

BLAST of Cp4.1LG10g08850 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 230.3 bits (586), Expect = 9.3e-61
Identity = 105/140 (75.00%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MAN+ASGM VNDECK+KFLELK+KRT+RFI+FKI+EK +QV +EKLG P ++Y+DF +S+
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFDF TE+NCQKS+IFFIAWSPD SRVRSKM+YASSKDRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAGI 141
           LQATDP+EM LD+I+ R  +
Sbjct: 121 LQATDPSEMSLDIIKGRLNL 140

[Close]

BLAST of Cp4.1LG10g08850 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 228.4 bits (581), Expect = 3.5e-60
Identity = 110/137 (80.29%), Postives = 125/137 (91.24%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKLKF+ELK+KRT R I++KIE+  KQV+VEKLG P QSY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P D+CRY +YDFDFVT ENCQKS+IFFIAWSPD ++VR KMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEMGLDV +SR
Sbjct: 121 LQATDPTEMGLDVFKSR 135

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g08850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVI2	6.7e-64	86.23	Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1	[more]
Q9FVI1	6.7e-64	86.33	Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1	[more]
Q0DLA3	3.7e-62	84.06	Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 P...	[more]
Q39250	8.2e-62	83.33	Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1	[more]
Q9ZSK3	2.4e-61	82.48	Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2	[more]

BLAST of Cp4.1LG10g08850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949831.1	7.38e-95	100.00	actin-depolymerizing factor 1-like [Cucurbita moschata] >XP_023543253.1 actin-de...	[more]
XP_022978980.1	2.12e-94	99.29	actin-depolymerizing factor 1-like [Cucurbita maxima]	[more]
XP_038881189.1	1.97e-92	98.55	actin-depolymerizing factor 1-like isoform X3 [Benincasa hispida] >XP_038881190....	[more]
XP_022972737.1	8.01e-92	97.83	actin-depolymerizing factor 1-like [Cucurbita maxima] >XP_023517168.1 actin-depo...	[more]
XP_022962833.1	8.01e-92	97.83	actin-depolymerizing factor 1-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG10g08850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GD54	3.57e-95	100.00	actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453110...	[more]
A0A6J1IRV5	1.02e-94	99.29	actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478768 P...	[more]
A0A6J1I5N8	3.88e-92	97.83	actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471251 P...	[more]
A0A6J1HFY8	3.88e-92	97.83	actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111463208...	[more]
A0A0A0KX62	9.15e-91	96.38	ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G294380 PE=3 ...	[more]

BLAST of Cp4.1LG10g08850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46010.1	5.8e-63	83.33	actin depolymerizing factor 1	[more]
AT3G46010.2	1.7e-62	83.21	actin depolymerizing factor 1	[more]
AT5G59890.1	1.7e-62	82.48	actin depolymerizing factor 4	[more]
AT4G00680.1	9.3e-61	75.00	actin depolymerizing factor 8	[more]
AT3G46000.1	3.5e-60	80.29	actin depolymerizing factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 12..139 e-value: 8.0E-60 score: 214.7
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 14..136 e-value: 1.2E-37 score: 128.5
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 7..139 score: 38.717911
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..139 e-value: 4.6E-53 score: 181.3
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..138
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 6..138 e-value: 2.2057E-67 score: 198.165
None	No IPR available	PANTHER	PTHR11913:SF74	ACTIN-DEPOLYMERIZING FACTOR 2-LIKE	coord: 1..138
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 2..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g08850.1	Cp4.1LG10g08850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003779	actin binding