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Cp4.1LG10g08430 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGGCCTCATTCCATTCCTTTACAAAGCCATTGTCCACTACAGAAATGGCTATAACGAAGCCGATACCCAACCGTCATGGCGCTGCGACGAGTCTCCCTCTGCTTCAGCTTCATATGTAAGACTTGCAGGTGATGAACAAGACAGTGCCTCTTCTTCTTCTTCTTCTTCTTCTTCTAATGGCAGTGTTAGAATATCAGCTTCTGGGATTCAATCTCCTTTGCGTCGTTTGGTTCCCCGTCGAGTTGCTGCTTGA ATGGAGGGCCTCATTCCATTCCTTTACAAAGCCATTGTCCACTACAGAAATGGCTATAACGAAGCCGATACCCAACCGTCATGGCGCTGCGACGAGTCTCCCTCTGCTTCAGCTTCATATGTAAGACTTGCAGGTGATGAACAAGACAGTGCCTCTTCTTCTTCTTCTTCTTCTTCTTCTAATGGCAGTGTTAGAATATCAGCTTCTGGGATTCAATCTCCTTTGCGTCGTTTGGTTCCCCGTCGAGTTGCTGCTTGA ATGGAGGGCCTCATTCCATTCCTTTACAAAGCCATTGTCCACTACAGAAATGGCTATAACGAAGCCGATACCCAACCGTCATGGCGCTGCGACGAGTCTCCCTCTGCTTCAGCTTCATATGTAAGACTTGCAGGTGATGAACAAGACAGTGCCTCTTCTTCTTCTTCTTCTTCTTCTTCTAATGGCAGTGTTAGAATATCAGCTTCTGGGATTCAATCTCCTTTGCGTCGTTTGGTTCCCCGTCGAGTTGCTGCTTGA MEGLIPFLYKAIVHYRNGYNEADTQPSWRCDESPSASASYVRLAGDEQDSASSSSSSSSSNGSVRISASGIQSPLRRLVPRRVAA Homology
BLAST of Cp4.1LG10g08430 vs. NCBI nr
Match: KAG6603637.1 (hypothetical protein SDJN03_04246, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 146 bits (369), Expect = 7.20e-44 Identity = 79/85 (92.94%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of Cp4.1LG10g08430 vs. NCBI nr
Match: KAG7033819.1 (hypothetical protein SDJN02_03544, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAG7033820.1 hypothetical protein SDJN02_03545, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144 bits (364), Expect = 4.17e-43 Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 0
BLAST of Cp4.1LG10g08430 vs. NCBI nr
Match: KGN54276.1 (hypothetical protein Csa_018169 [Cucumis sativus]) HSP 1 Score: 68.2 bits (165), Expect = 1.83e-12 Identity = 56/112 (50.00%), Postives = 69/112 (61.61%), Query Frame = 0
BLAST of Cp4.1LG10g08430 vs. NCBI nr
Match: KAG6595338.1 (hypothetical protein SDJN03_11891, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 65.9 bits (159), Expect = 8.16e-12 Identity = 51/88 (57.95%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of Cp4.1LG10g08430 vs. NCBI nr
Match: KAG7027348.1 (hypothetical protein SDJN02_11360, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 63.5 bits (153), Expect = 7.50e-11 Identity = 51/93 (54.84%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of Cp4.1LG10g08430 vs. ExPASy TrEMBL
Match: A0A0A0L2A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296290 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 8.87e-13 Identity = 56/112 (50.00%), Postives = 69/112 (61.61%), Query Frame = 0
BLAST of Cp4.1LG10g08430 vs. ExPASy TrEMBL
Match: A0A0A0LD26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.60e-10 Identity = 44/92 (47.83%), Postives = 58/92 (63.04%), Query Frame = 0
BLAST of Cp4.1LG10g08430 vs. ExPASy TrEMBL
Match: A0A5D3DNC7 (Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001410 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 5.35e-10 Identity = 46/93 (49.46%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of Cp4.1LG10g08430 vs. ExPASy TrEMBL
Match: S5WCG5 (Legume-specific protein OS=Aeschynomene sp. CPI104040 OX=1381135 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.05e-09 Identity = 48/92 (52.17%), Postives = 59/92 (64.13%), Query Frame = 0
BLAST of Cp4.1LG10g08430 vs. ExPASy TrEMBL
Match: A0A7J6I2M9 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_010996 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.31e-09 Identity = 44/90 (48.89%), Postives = 56/90 (62.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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