Cp4.1LG10g08430 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG10g08430
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionLegume-specific protein
LocationCp4.1LG10: 5063878 .. 5064135 (+)
RNA-Seq ExpressionCp4.1LG10g08430
SyntenyCp4.1LG10g08430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGCCTCATTCCATTCCTTTACAAAGCCATTGTCCACTACAGAAATGGCTATAACGAAGCCGATACCCAACCGTCATGGCGCTGCGACGAGTCTCCCTCTGCTTCAGCTTCATATGTAAGACTTGCAGGTGATGAACAAGACAGTGCCTCTTCTTCTTCTTCTTCTTCTTCTTCTAATGGCAGTGTTAGAATATCAGCTTCTGGGATTCAATCTCCTTTGCGTCGTTTGGTTCCCCGTCGAGTTGCTGCTTGA

mRNA sequence

ATGGAGGGCCTCATTCCATTCCTTTACAAAGCCATTGTCCACTACAGAAATGGCTATAACGAAGCCGATACCCAACCGTCATGGCGCTGCGACGAGTCTCCCTCTGCTTCAGCTTCATATGTAAGACTTGCAGGTGATGAACAAGACAGTGCCTCTTCTTCTTCTTCTTCTTCTTCTTCTAATGGCAGTGTTAGAATATCAGCTTCTGGGATTCAATCTCCTTTGCGTCGTTTGGTTCCCCGTCGAGTTGCTGCTTGA

Coding sequence (CDS)

ATGGAGGGCCTCATTCCATTCCTTTACAAAGCCATTGTCCACTACAGAAATGGCTATAACGAAGCCGATACCCAACCGTCATGGCGCTGCGACGAGTCTCCCTCTGCTTCAGCTTCATATGTAAGACTTGCAGGTGATGAACAAGACAGTGCCTCTTCTTCTTCTTCTTCTTCTTCTTCTAATGGCAGTGTTAGAATATCAGCTTCTGGGATTCAATCTCCTTTGCGTCGTTTGGTTCCCCGTCGAGTTGCTGCTTGA

Protein sequence

MEGLIPFLYKAIVHYRNGYNEADTQPSWRCDESPSASASYVRLAGDEQDSASSSSSSSSSNGSVRISASGIQSPLRRLVPRRVAA
Homology
BLAST of Cp4.1LG10g08430 vs. NCBI nr
Match: KAG6603637.1 (hypothetical protein SDJN03_04246, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 146 bits (369), Expect = 7.20e-44
Identity = 79/85 (92.94%), Postives = 81/85 (95.29%), Query Frame = 0

Query: 1  MEGLIPFLYKAIVHYRNGYNEADTQPSWRCDESPSASASYVRLAGDEQDSASSSSSSSSS 60
          MEGLIPFLYKAIVHYRNGYN+AD+QPSWRCDESPSASASYVRLAGDEQDSAS   SSS S
Sbjct: 1  MEGLIPFLYKAIVHYRNGYNQADSQPSWRCDESPSASASYVRLAGDEQDSAS---SSSFS 60

Query: 61 NGSVRISASGIQSPLRRLVPRRVAA 85
          NGSVRISASGIQSPLRRLVPRRVAA
Sbjct: 61 NGSVRISASGIQSPLRRLVPRRVAA 82

BLAST of Cp4.1LG10g08430 vs. NCBI nr
Match: KAG7033819.1 (hypothetical protein SDJN02_03544, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAG7033820.1 hypothetical protein SDJN02_03545, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144 bits (364), Expect = 4.17e-43
Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 0

Query: 1  MEGLIPFLYKAIVHYRNGYNEADTQPSWRCDESPSASASYVRLAGDEQDSASSSSSSSSS 60
          MEGLIPFLYKAIVHYRNGYN+AD+QPSWRCDESPSASASYVRLAGDEQDSAS   SSS S
Sbjct: 1  MEGLIPFLYKAIVHYRNGYNQADSQPSWRCDESPSASASYVRLAGDEQDSAS---SSSFS 60

Query: 61 NGSVRISASGIQSPLRRLVPRRVAA 85
          NGSVRISASGIQSPLRRLVP RVAA
Sbjct: 61 NGSVRISASGIQSPLRRLVPHRVAA 82

BLAST of Cp4.1LG10g08430 vs. NCBI nr
Match: KGN54276.1 (hypothetical protein Csa_018169 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 1.83e-12
Identity = 56/112 (50.00%), Postives = 69/112 (61.61%), Query Frame = 0

Query: 1   MEGLIPFLYKAIVHYRNGYNEADT----QPS--WRCD---ESPSASAS-----YVRLAGD 60
           MEGLIPFLYKAI+ Y+NG +E +     QPS  W CD   +SP +S+S     YVRLAGD
Sbjct: 1   MEGLIPFLYKAILQYKNGNSETNNNNMNQPSSYWWCDADHQSPPSSSSSSEALYVRLAGD 60

Query: 61  EQD------------SASSSSSSSSSNGSVRISA-SGIQSPLRRLVPRRVAA 85
           +QD            S+SSSSS+ +   SV IS+ SGIQSPL  L+  RV A
Sbjct: 61  DQDYINTNTNNNLPFSSSSSSSTFNDTKSVIISSNSGIQSPLCHLLSNRVVA 112

BLAST of Cp4.1LG10g08430 vs. NCBI nr
Match: KAG6595338.1 (hypothetical protein SDJN03_11891, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.9 bits (159), Expect = 8.16e-12
Identity = 51/88 (57.95%), Postives = 59/88 (67.05%), Query Frame = 0

Query: 1  MEGLIPFLYKAIVHYRNGYNEADTQPSWRCDESPSASASYVRLAGDEQD----------- 60
          MEGLIPF+YKAIV +RNG N   +Q  W CD SPS SASY RL GD+ +           
Sbjct: 1  MEGLIPFVYKAIVEFRNGNN---SQTMWCCD-SPS-SASYQRLPGDDDELHNINGASSSS 60

Query: 61 -SASSSSSSSSSNGSVRISASGI-QSPL 75
           S+SSSSSSSSS+ SV IS SG+ QSPL
Sbjct: 61 SSSSSSSSSSSSSDSVLISGSGVDQSPL 83

BLAST of Cp4.1LG10g08430 vs. NCBI nr
Match: KAG7027348.1 (hypothetical protein SDJN02_11360, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 63.5 bits (153), Expect = 7.50e-11
Identity = 51/93 (54.84%), Postives = 58/93 (62.37%), Query Frame = 0

Query: 1  MEGLIPFLYKAIVHYRNGYNEADTQPSWRCDESPSASASYVRLAGDEQD----------- 60
          MEGLIPF+YKAIV +RNG N    Q  W CD SPS SASY RL GD+ +           
Sbjct: 1  MEGLIPFVYKAIVEFRNGNNN---QTMWCCD-SPS-SASYQRLPGDDDELHNINGASSSS 60

Query: 61 ------SASSSSSSSSSNGSVRISASGI-QSPL 75
                S+SSSSSSSSS+ SV IS SG+ QSPL
Sbjct: 61 SSSSSSSSSSSSSSSSSSDSVLISGSGVDQSPL 88

BLAST of Cp4.1LG10g08430 vs. ExPASy TrEMBL
Match: A0A0A0L2A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296290 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.87e-13
Identity = 56/112 (50.00%), Postives = 69/112 (61.61%), Query Frame = 0

Query: 1   MEGLIPFLYKAIVHYRNGYNEADT----QPS--WRCD---ESPSASAS-----YVRLAGD 60
           MEGLIPFLYKAI+ Y+NG +E +     QPS  W CD   +SP +S+S     YVRLAGD
Sbjct: 1   MEGLIPFLYKAILQYKNGNSETNNNNMNQPSSYWWCDADHQSPPSSSSSSEALYVRLAGD 60

Query: 61  EQD------------SASSSSSSSSSNGSVRISA-SGIQSPLRRLVPRRVAA 85
           +QD            S+SSSSS+ +   SV IS+ SGIQSPL  L+  RV A
Sbjct: 61  DQDYINTNTNNNLPFSSSSSSSTFNDTKSVIISSNSGIQSPLCHLLSNRVVA 112

BLAST of Cp4.1LG10g08430 vs. ExPASy TrEMBL
Match: A0A0A0LD26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.60e-10
Identity = 44/92 (47.83%), Postives = 58/92 (63.04%), Query Frame = 0

Query: 1  MEGLIPFLYKAIVHYRNGYNEADTQPSWRCDESPSASASYVRL-AGD------EQDSASS 60
          MEGLIPF+YKAIV Y+N   +     SW CD   S S SY+RL +GD      + D++ S
Sbjct: 1  MEGLIPFVYKAIVQYKNE-KQVPAIRSWLCD---SPSTSYIRLPSGDSGRFQFQSDASPS 60

Query: 61 SSSSSSSNGSVRISASGIQSPLRRLVPRRVAA 85
          S S +SS  +  + ++G+QSPLR L  RRVAA
Sbjct: 61 SKSPTSSTTTQILVSTGVQSPLRHLTTRRVAA 88

BLAST of Cp4.1LG10g08430 vs. ExPASy TrEMBL
Match: A0A5D3DNC7 (Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001410 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.35e-10
Identity = 46/93 (49.46%), Postives = 58/93 (62.37%), Query Frame = 0

Query: 1  MEGLIPFLYKAIVHYRNGYNEADTQPSWRCDESPSASASYVRL-AGD------EQDSASS 60
          MEGLIPF+YKAIV Y+N   +     SW CD   S S SY+RL +GD      + D++ S
Sbjct: 1  MEGLIPFVYKAIVQYKNE-KQVPAIRSWLCD---SPSTSYIRLPSGDSGRFQFQSDASPS 60

Query: 61 SSSSSSSNGSVRISAS-GIQSPLRRLVPRRVAA 85
          S S +SS  + +I  S G+QSPLR L  RRVAA
Sbjct: 61 SKSPTSSTTATQILVSTGVQSPLRHLTTRRVAA 89

BLAST of Cp4.1LG10g08430 vs. ExPASy TrEMBL
Match: S5WCG5 (Legume-specific protein OS=Aeschynomene sp. CPI104040 OX=1381135 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.05e-09
Identity = 48/92 (52.17%), Postives = 59/92 (64.13%), Query Frame = 0

Query: 1  MEGLIPFLYKAIVHYRNGYNEADTQPSWRCDESPSASASYVRLAGDE-------QDSASS 60
          MEGLIPF+YKAI+ Y+NG NE     +W C ESPS S  YVRL GD          SAS+
Sbjct: 1  MEGLIPFVYKAIMQYKNG-NEGAIG-TWIC-ESPSYS--YVRLPGDSGRFQTPASCSAST 60

Query: 61 SSSSSSSNGSVRISASGIQSPLRRLVPRRVAA 85
           +SSSSS+ +  I +SG+QSP + L  RRV A
Sbjct: 61 PASSSSSSAAQVIVSSGVQSPHQGLTHRRVVA 87

BLAST of Cp4.1LG10g08430 vs. ExPASy TrEMBL
Match: A0A7J6I2M9 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_010996 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.31e-09
Identity = 44/90 (48.89%), Postives = 56/90 (62.22%), Query Frame = 0

Query: 1  MEGLIPFLYKAIVHYRNGYNEA-----DTQPSWRCD-ESPSASASYVRLAGDE----QDS 60
          MEGLIPF+YK IV Y+NG N       D   SW  + +SP AS +Y+RL G +    Q S
Sbjct: 1  MEGLIPFVYKVIVEYKNGNNNRQEHHHDLLSSWLINNDSPMASIAYIRLPGGDSGRFQSS 60

Query: 61 ASSSSSSSSSNGSVRISASGIQ-SPLRRLV 79
            + +SSSSS  SV  S+SG+Q SP+RR V
Sbjct: 61 PFARASSSSSTSSVSSSSSGVQYSPVRRRV 90

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6603637.17.20e-4492.94hypothetical protein SDJN03_04246, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7033819.14.17e-4391.76hypothetical protein SDJN02_03544, partial [Cucurbita argyrosperma subsp. argyro... [more]
KGN54276.11.83e-1250.00hypothetical protein Csa_018169 [Cucumis sativus][more]
KAG6595338.18.16e-1257.95hypothetical protein SDJN03_11891, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7027348.17.50e-1154.84hypothetical protein SDJN02_11360, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
A0A0A0L2A88.87e-1350.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296290 PE=4 SV=1[more]
A0A0A0LD262.60e-1047.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1[more]
A0A5D3DNC75.35e-1049.46Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
S5WCG52.05e-0952.17Legume-specific protein OS=Aeschynomene sp. CPI104040 OX=1381135 PE=4 SV=1[more]
A0A7J6I2M92.31e-0948.89Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_010996 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..69
NoneNo IPR availablePANTHERPTHR34670EXPRESSED PROTEINcoord: 1..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g08430.1Cp4.1LG10g08430.1mRNA