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Cp4.1LG10g08290 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAAAGTCATTTTGATGACAGCACTAGTAGACGCTCCTTGCATAGAGAGCCACCAAATCTTGCTCTCTCTCTCTGGGTCTTGCTCCGTCGGAATTGAATTGGTGAAGAACCAAGAATCTACAAAGCAATACAAAAATGGTGAATGAGCAATCGGTTATGGCCGTCATCAGGGCAACTAGGCCTACCTTTCGCAATGACAACGACAAGGTCGCCTTTGCGGTTCACGCCATATTTCTCGCCTCCGGCTGCGTGCTCACTGCCACCGGACCTCCTGCTTTTACTGACGCCGCCTTTTCTTCTCCCTCAAAGGGTATCACTTCTTTCTTGTTTATTGAAAAATTAAAAATTCTTCCCATATTTAGTATTTCTGAGTCTTGGATTGGGGTTTAGATGAAATTAGTATCGAGGGCTGGAACGAATTAGAGGATGAGTACGCATACGTTTACGCAAATCTTGAAAAGGATTCTAACTGGAAGAAAGTGATAGTGAAGTGCCTGGTGATGAACGGGAAATTGCTTATTGATGCCTTGACTGATGAGAATTCCGAGCCGCTCCATCTTGAAATTGAGTACGCTTTCCCAGATATCATATATATATATATGTGTATTGGCAAATTAGTACGTTGTCCTGTTTCGGTATTGAGTGTTTTTTTGTTCCTATTGTTCTTTTAGCGTTGAAGACATCGTCAATCCGAATGGGGGAAGTAACTATTCAACGCAGTACAGAAATTTGGATACTCTGGTGAAACGCTTGGGCTCGGGAATATTCTCAAAATTGGGTGGTTATTCGAAAGCCACGACAAGTAATCCAGCAAGGTAGTGATTAGATCAGTAATCAACACGTACGGTTATTTTAATTCTTCATTTTTCCTGATGTTATTGAGACGATTACTCTCTTTTGTGATTCTTATTTCTTGGCGTGTTATAAATATGAATCGAAATTATGTCTCTGGTAATCGTTCTTTAATCTGGTTCTTGGCGGTCTACATGCTTTTTGCAGGGCTGAGAGTGAGAGTAGTGAAAGATCATCTGTAGTTGTAAATAAGCCTACTTCTGGAATTCCTGAGCTTCCTGGTCCACTGCTCGATCCTTCCGGGTCTTTCTCTTTATCCACACTTGCGCAACCACAAAATGTCATGACATAATTTGAGAAATATGTTGGGTCTTGACTTGAGTTCTTAACTATTGTATGCTACCATGATTTTACGTTTGTGTTGGGTGCTATTATCACTGTCTCCAACATTCAGATTTGCTAGTTTTTAAGTTTCTAACAGTAATTTGAATGCATTTTCTTTATGATATCTTGTTTTCCCCTTTATGGTTAGATCAAGAAGATAATGGTTTATATGCTTTGTGCTTTGATTGATTTGATACCCAGTTCCTCTTAGTGGTTTATAGGCTTTGATTGATTTGACACAAGAAGATAATGGTTTCCTTTGAGAGAGATTGTAATAGTCTTACTTAACGTGCAGGAATTGTTTTTGCTGAATTATTGTGACGGTCAAATATTTAATGGCAAGCATTTTGTGCCTTCGTCCAATCCTTAATTGTATCAATTTAGGAATTTTCGAAGGTTCCATGTTTACAAATAATTTATCTATGAACCTGTATCCCATGAGTGAGTGAGTGAGTTGACATAGTCTGAATGTGGCTGTTTTTGCTTTTCTCTTAGAGTTGTAATTCCTCCTATTAATCCCTTTGGTGGTGGCGATCTTTTTCCTGGACCTGGTGCTGGAATGTACCCTGCTGGGTAATTTATTTAAGTTTGTCGATCATTTGTGTACGTATGTGTAACAGTCCAAGCCTACCGCTAGTCGATATTGTTTTTTTTTTGCATTCCCTCAAGGTTTTTAAAATGTGTTTGTGAGAGGTCTCCACAATCTTAAAAAGAATGTTTGTTCCCCTCTCCAATCGCTGTGGGATCTCACAATCCAATCCCCTTCGAGGCTCAGCATTCTCGTTGGCACTTTATACTCTCTCTAATTGATGTGGGATCTCACATCGATTGAAGAGGGGAATGAAACATTTTTTATAAAGGGGTGGAAACTTCTCCCTAGCAGACGTGTTTTAAAAACCTTGAGGGAAAACTCGAAAAGAAAAATACAACGAGAACAATATTTGCCAATGATAGACTTTGACTATCATAGTACGATTGTCATCGGCGCAAAATATCATGTTAATTTTGTTTTTATGTTTTTTTTTTCCAATTGATTACAGAGGTGGTTTAAGCGGCGATGGGAGCATGCTTTTAGGTTGGTGAATTGTTAAGTCTTCTAGTACTAGATTGAAAATAAGCGTAATTTCACTATTTTATCATGCAGGACCTAATGACCCGCGATGGTTAGGAGTTGGTAGAGGACCTGGATTTGAAGGCGGGCAGCCGTGAGTCAATTAGCTCTCTCTCTCACTCATATAGACACACACAAACACTCACCTTTGCATTATGACTGCTGCTAATTCCAAGTATCTTGAAACAGGGGTGTTCCTCCAGGTGCTCGTTTTGATCCATATGGTCCACCTGGTGTTCCTGGTTTTGAACCCTTTCGGTTTGTTAGGTATATGGAATTTTCCTTACCGTGCCATAGCATATTGGGGCGGGGGCTCTCTCTTTGAATCATTAATTTCTATCAGCGTTTATCATTTGCTGAATGCCTGCTTTGACAACGACTAAATTCAAACCATGTATCTTGGCATGCTAAATTAGGATATGTTCATAGAAACAACTTGTTTCTGAATACATGTTGTATGGAGCGGCAGAGTAATGAATTAACTGGGATGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCTTTGTTACAGAAATCCTGGGAGACCTGGAGGGGGAACTCATCCGGACCTGGAGCATTTTGGAGACGGTTCAGATTTCATATAGTCCGCCATAGTTATAAAGCTCTGAAAGTTGTTGAAAGTTACTTTTTTCTTCTGTTTTAGGTGGCCAGTAATGACTGTACGTACGGTGAATATAGGAATGGTGTTTACTGAATTTTACACGTGTCAAAAAACATTTTAACTTCAAACTTTTACACCCATATAAATAATAATGTATGTATTTTACCTATTATAT CGAAAGTCATTTTGATGACAGCACTAGTAGACGCTCCTTGCATAGAGAGCCACCAAATCTTGCTCTCTCTCTCTGGGTCTTGCTCCGTCGGAATTGAATTGGTGAAGAACCAAGAATCTACAAAGCAATACAAAAATGGTGAATGAGCAATCGGTTATGGCCGTCATCAGGGCAACTAGGCCTACCTTTCGCAATGACAACGACAAGGTCGCCTTTGCGGTTCACGCCATATTTCTCGCCTCCGGCTGCGTGCTCACTGCCACCGGACCTCCTGCTTTTACTGACGCCGCCTTTTCTTCTCCCTCAAAGGATGAAATTAGTATCGAGGGCTGGAACGAATTAGAGGATGAGTACGCATACGTTTACGCAAATCTTGAAAAGGATTCTAACTGGAAGAAAGTGATAGTGAAGTGCCTGGTGATGAACGGGAAATTGCTTATTGATGCCTTGACTGATGAGAATTCCGAGCCGCTCCATCTTGAAATTGACGTTGAAGACATCGTCAATCCGAATGGGGGAAGTAACTATTCAACGCAGTACAGAAATTTGGATACTCTGGTGAAACGCTTGGGCTCGGGAATATTCTCAAAATTGGGTGGTTATTCGAAAGCCACGACAAGTAATCCAGCAAGGGCTGAGAGTGAGAGTAGTGAAAGATCATCTGTAGTTGTAAATAAGCCTACTTCTGGAATTCCTGAGCTTCCTGGTCCACTGCTCGATCCTTCCGGAGTTGTAATTCCTCCTATTAATCCCTTTGGTGGTGGCGATCTTTTTCCTGGACCTGGACCTAATGACCCGCGATGGTTAGGAGTTGGTAGAGGACCTGGATTTGAAGGCGGGCAGCCGGGTGTTCCTCCAGGTGCTCGTTTTGATCCATATGGTCCACCTGGTGTTCCTGGTTTTGAACCCTTTCGGTTTGTTAGAAATCCTGGGAGACCTGGAGGGGGAACTCATCCGGACCTGGAGCATTTTGGAGACGGTTCAGATTTCATATAGTCCGCCATAGTTATAAAGCTCTGAAAGTTGTTGAAAGTTACTTTTTTCTTCTGTTTTAGGTGGCCAGTAATGACTGTACGTACGGTGAATATAGGAATGGTGTTTACTGAATTTTACACGTGTCAAAAAACATTTTAACTTCAAACTTTTACACCCATATAAATAATAATGTATGTATTTTACCTATTATAT ATGGTGAATGAGCAATCGGTTATGGCCGTCATCAGGGCAACTAGGCCTACCTTTCGCAATGACAACGACAAGGTCGCCTTTGCGGTTCACGCCATATTTCTCGCCTCCGGCTGCGTGCTCACTGCCACCGGACCTCCTGCTTTTACTGACGCCGCCTTTTCTTCTCCCTCAAAGGATGAAATTAGTATCGAGGGCTGGAACGAATTAGAGGATGAGTACGCATACGTTTACGCAAATCTTGAAAAGGATTCTAACTGGAAGAAAGTGATAGTGAAGTGCCTGGTGATGAACGGGAAATTGCTTATTGATGCCTTGACTGATGAGAATTCCGAGCCGCTCCATCTTGAAATTGACGTTGAAGACATCGTCAATCCGAATGGGGGAAGTAACTATTCAACGCAGTACAGAAATTTGGATACTCTGGTGAAACGCTTGGGCTCGGGAATATTCTCAAAATTGGGTGGTTATTCGAAAGCCACGACAAGTAATCCAGCAAGGGCTGAGAGTGAGAGTAGTGAAAGATCATCTGTAGTTGTAAATAAGCCTACTTCTGGAATTCCTGAGCTTCCTGGTCCACTGCTCGATCCTTCCGGAGTTGTAATTCCTCCTATTAATCCCTTTGGTGGTGGCGATCTTTTTCCTGGACCTGGACCTAATGACCCGCGATGGTTAGGAGTTGGTAGAGGACCTGGATTTGAAGGCGGGCAGCCGGGTGTTCCTCCAGGTGCTCGTTTTGATCCATATGGTCCACCTGGTGTTCCTGGTTTTGAACCCTTTCGGTTTGTTAGAAATCCTGGGAGACCTGGAGGGGGAACTCATCCGGACCTGGAGCATTTTGGAGACGGTTCAGATTTCATATAG MVNEQSVMAVIRATRPTFRNDNDKVAFAVHAIFLASGCVLTATGPPAFTDAAFSSPSKDEISIEGWNELEDEYAYVYANLEKDSNWKKVIVKCLVMNGKLLIDALTDENSEPLHLEIDVEDIVNPNGGSNYSTQYRNLDTLVKRLGSGIFSKLGGYSKATTSNPARAESESSERSSVVVNKPTSGIPELPGPLLDPSGVVIPPINPFGGGDLFPGPGPNDPRWLGVGRGPGFEGGQPGVPPGARFDPYGPPGVPGFEPFRFVRNPGRPGGGTHPDLEHFGDGSDFI Homology
BLAST of Cp4.1LG10g08290 vs. ExPASy Swiss-Prot
Match: Q9M330 (Probable proteasome inhibitor OS=Arabidopsis thaliana OX=3702 GN=At3g53970 PE=1 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 5.6e-73 Identity = 164/310 (52.90%), Postives = 197/310 (63.55%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. ExPASy Swiss-Prot
Match: Q92530 (Proteasome inhibitor PI31 subunit OS=Homo sapiens OX=9606 GN=PSMF1 PE=1 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 2.0e-06 Identity = 61/217 (28.11%), Postives = 98/217 (45.16%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. ExPASy Swiss-Prot
Match: Q5RDN3 (Proteasome inhibitor PI31 subunit OS=Pongo abelii OX=9601 GN=PSMF1 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.0e-06 Identity = 61/214 (28.50%), Postives = 97/214 (45.33%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. ExPASy Swiss-Prot
Match: Q8BHL8 (Proteasome inhibitor PI31 subunit OS=Mus musculus OX=10090 GN=Psmf1 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.3e-05 Identity = 64/248 (25.81%), Postives = 109/248 (43.95%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. ExPASy Swiss-Prot
Match: Q5XIU5 (Proteasome inhibitor PI31 subunit OS=Rattus norvegicus OX=10116 GN=Psmf1 PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 6.5e-05 Identity = 64/248 (25.81%), Postives = 106/248 (42.74%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. NCBI nr
Match: XP_023545137.1 (probable proteasome inhibitor isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 567 bits (1461), Expect = 1.90e-203 Identity = 286/305 (93.77%), Postives = 286/305 (93.77%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. NCBI nr
Match: XP_022950229.1 (probable proteasome inhibitor isoform X1 [Cucurbita moschata]) HSP 1 Score: 553 bits (1425), Expect = 9.79e-198 Identity = 279/305 (91.48%), Postives = 280/305 (91.80%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. NCBI nr
Match: XP_022978238.1 (probable proteasome inhibitor isoform X1 [Cucurbita maxima]) HSP 1 Score: 550 bits (1417), Expect = 9.69e-197 Identity = 278/305 (91.15%), Postives = 281/305 (92.13%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. NCBI nr
Match: XP_023545138.1 (probable proteasome inhibitor isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 532 bits (1370), Expect = 5.42e-190 Identity = 270/286 (94.41%), Postives = 272/286 (95.10%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. NCBI nr
Match: XP_022950230.1 (probable proteasome inhibitor isoform X2 [Cucurbita moschata]) HSP 1 Score: 521 bits (1341), Expect = 2.38e-185 Identity = 266/287 (92.68%), Postives = 268/287 (93.38%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. ExPASy TrEMBL
Match: A0A6J1GF71 (probable proteasome inhibitor isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453381 PE=4 SV=1) HSP 1 Score: 553 bits (1425), Expect = 4.74e-198 Identity = 279/305 (91.48%), Postives = 280/305 (91.80%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. ExPASy TrEMBL
Match: A0A6J1ISG6 (probable proteasome inhibitor isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478282 PE=4 SV=1) HSP 1 Score: 550 bits (1417), Expect = 4.69e-197 Identity = 278/305 (91.15%), Postives = 281/305 (92.13%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. ExPASy TrEMBL
Match: A0A6J1GF52 (probable proteasome inhibitor isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453381 PE=4 SV=1) HSP 1 Score: 521 bits (1341), Expect = 1.15e-185 Identity = 266/287 (92.68%), Postives = 268/287 (93.38%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. ExPASy TrEMBL
Match: A0A6J1ITK3 (probable proteasome inhibitor isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478282 PE=4 SV=1) HSP 1 Score: 516 bits (1330), Expect = 3.28e-184 Identity = 263/286 (91.96%), Postives = 267/286 (93.36%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. ExPASy TrEMBL
Match: A0A6J1GE95 (probable proteasome inhibitor isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111453381 PE=4 SV=1) HSP 1 Score: 479 bits (1233), Expect = 2.64e-169 Identity = 247/305 (80.98%), Postives = 248/305 (81.31%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. TAIR 10
Match: AT3G53970.1 (proteasome inhibitor-related ) HSP 1 Score: 275.8 bits (704), Expect = 3.9e-74 Identity = 164/310 (52.90%), Postives = 197/310 (63.55%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. TAIR 10
Match: AT3G53970.2 (proteasome inhibitor-related ) HSP 1 Score: 201.8 bits (512), Expect = 7.2e-52 Identity = 126/258 (48.84%), Postives = 160/258 (62.02%), Query Frame = 0
BLAST of Cp4.1LG10g08290 vs. TAIR 10
Match: AT1G48530.1 (CONTAINS InterPro DOMAIN/s: Proteasome Inhibitor PI31 (InterPro:IPR021625); BEST Arabidopsis thaliana protein match is: proteasome inhibitor-related (TAIR:AT3G53970.2); Has 43 Blast hits to 43 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 134.0 bits (336), Expect = 1.9e-31 Identity = 75/165 (45.45%), Postives = 102/165 (61.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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