Cp4.1LG10g08170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g08170
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Tubulin beta chain
Location	Cp4.1LG10: 5201439 .. 5203514 (-)
RNA-Seq Expression	Cp4.1LG10g08170
Synteny	Cp4.1LG10g08170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTTGTCCAGCTGTTAAATGAAATTTGAAATTCAAAATTTGAAAACCTTCCAGCGCATTTCATTTACCGTTACCACTCCACCAGGTAGCCCGTTGCATTTCACAGCTCGTTTCTCTCTCTACAACCCAGAAAAAACCCTAATTCCCGGTTTCTCTCTCTTCCCCCTTTATAAACCAATTCTCTTTCTCTCTCTCTCTCTCTCTGTAAGAAAGGTAACCTCTTAATCTCTCTCCGTCCTAACAACTTCCCATTTATTTTCCCCGCCCTTCTTCTTCCTCTCTCGCATTTCTCACAGAAATCCATTTCTTCTGCGGAAAAATGAGAGAGATCCTTCACGTTCAGGGTGGGCAATGTGGCAACCAGATCGGTGCCAAGTTCTGGGAAGTTGTTTGCGCCGAGCATGGCATCGATACCACCGGGAAGTATCAGGGAGATTCCGATCTTCAGCTTGAGAGGATTAATGTCTACTACAATGAAGCTAGTTGCGGGAGGTATGTACCTCGCGCTGTTCTCATGGATCTTGAACCTGGTACCATGGACAGTATCAGATCTGGGCTTTATGGTCAGATCTTCAGGCCGGATAATTTTGTTTTTGGTCAATCTGGTGCTGGAAACAACTGGGCTAAAGGTCACTACACTGAGGGTGCTGAACTTATTGATTCCGTTCTCGATGTTGTCCGGAAGGAGGCGGAGAACTGTGATTGTTTGCAAGGTTTGCTATTGATCTGCCTCTGTTTCTGTTTCTGTTTCTGATTCTCTCTGTCTATTTCTGTGATTTTTTCTGAACGTTGGTGCGGTCTTGTGGTTTTCTAGGGTTTCAGGTGTGTCACTCTCTAGGAGGGGGAACTGGATCTGGGATGGGTACTCTTCTGATTTCGAAGATCAGAGAAGAATATCCGGACAGGATGATGCTTACCTTCTCCGTCTTTCCATCTCCCAAAGTTTCTGATACTGTTGTTGAGCCTTACAACGCTACTCTTTCAGTTCATCAACTGGTTGAAAATGCAGATGAGTGCATGGTTCTTGACAATGAAGCTCTCTATGATATTTGCTTCCGTACCCTCAAGCTCACCACTCCAAGCTGTAAGATCTATCTTCGTTTAAACATCTGGAATTTTCTTCTTTGCTTTCAACACGCTGTTTAGTAGTTGTCTGTTTCTTTTTTAATTTTTGTATCACGTAGTGAGTTTCGTACACAGAGTTAAAGCTGATGTGTGGGTAGTTATTAATAAATGATGAGATCTGGATATGAATTATGCTAGTCTAGTGATTATGAACCCGTGGGAAAGAAAGTACATCGAAGATTCAATGTTTTTTACTATTGCATTTTGTTTTGGAAACGAATTGTTTTAATTCATTTATTGCACTAATTTGTTTCTCTTGTATGGTTGGAACAGTTGGTGATTTGAACCATTTGATCTCTGCAACCATGTCCGGTGTGACTTGCTGTTTGAGATTCCCTGGGCAGCTTAACTCTGATCTCAGAAAGCTTGCTGTTAATCTCATTCCCTTCCCTCGTCTCCACTTTTTCATGGTGGGTTTTGCTCCTCTCACATCTCGTGGTTCCCAGCAGTACAGAGCACTGACTGTGCCGGAGCTTACTCAACAAATGTGGGATGCCAAGAACATGATGTGTGCTGCAGACCCACGACACGGTCGCTACTTAACTGCCTCTGCTATGTTCAGAGGTAAAATGAGCACGAAGGAGGTAGATGAGCAAATGCTCAACGTGCAGAACAAGAACTCTTCTTACTTTGTGGAGTGGATTCCAAACAATGTTAAATCGACTGTTTGCGATATCCCTCCAACTGGTCTGAAGATGGCTTCAACGTTCATTGGAAATTCCACATCAATTCAGGAAATGTTCCGCCGTGTGAGTGAGCAGTTCACTGCCATGTTTAGGAGGAAAGCTTTCTTGCACTGGTACACAGGTGAAGGTATGGACGAGATGGAGTTCACTGAGGCTGAAAGTAACATGAATGATCTGGTTTCTGAGTACCAGCAGTACCAAGACGCCACAGCCGATGAGGAATATTACGACGAAGAAGAAGAGGACCCAGAAGATAATGTGTAA

mRNA sequence

TATTTTGTCCAGCTGTTAAATGAAATTTGAAATTCAAAATTTGAAAACCTTCCAGCGCATTTCATTTACCGTTACCACTCCACCAGGTAGCCCGTTGCATTTCACAGCTCGTTTCTCTCTCTACAACCCAGAAAAAACCCTAATTCCCGGTTTCTCTCTCTTCCCCCTTTATAAACCAATTCTCTTTCTCTCTCTCTCTCTCTCTGTAAGAAAGGTAACCTCTTAATCTCTCTCCGTCCTAACAACTTCCCATTTATTTTCCCCGCCCTTCTTCTTCCTCTCTCGCATTTCTCACAGAAATCCATTTCTTCTGCGGAAAAATGAGAGAGATCCTTCACGTTCAGGGTGGGCAATGTGGCAACCAGATCGGTGCCAAGTTCTGGGAAGTTGTTTGCGCCGAGCATGGCATCGATACCACCGGGAAGTATCAGGGAGATTCCGATCTTCAGCTTGAGAGGATTAATGTCTACTACAATGAAGCTAGTTGCGGGAGGTATGTACCTCGCGCTGTTCTCATGGATCTTGAACCTGGTACCATGGACAGTATCAGATCTGGGCTTTATGGTCAGATCTTCAGGCCGGATAATTTTGTTTTTGGTCAATCTGGTGCTGGAAACAACTGGGCTAAAGGTCACTACACTGAGGGTGCTGAACTTATTGATTCCGTTCTCGATGTTGTCCGGAAGGAGGCGGAGAACTGTGATTGTTTGCAAGGGTTTCAGGTGTGTCACTCTCTAGGAGGGGGAACTGGATCTGGGATGGGTACTCTTCTGATTTCGAAGATCAGAGAAGAATATCCGGACAGGATGATGCTTACCTTCTCCGTCTTTCCATCTCCCAAAGTTTCTGATACTGTTGTTGAGCCTTACAACGCTACTCTTTCAGTTCATCAACTGGTTGAAAATGCAGATGAGTGCATGGTTCTTGACAATGAAGCTCTCTATGATATTTGCTTCCGTACCCTCAAGCTCACCACTCCAAGCTGTGAAGGTATGGACGAGATGGAGTTCACTGAGGCTGAAAGTAACATGAATGATCTGGTTTCTGAGTACCAGCAGTACCAAGACGCCACAGCCGATGAGGAATATTACGACGAAGAAGAAGAGGACCCAGAAGATAATGTGTAA

Coding sequence (CDS)

ATGAGAGAGATCCTTCACGTTCAGGGTGGGCAATGTGGCAACCAGATCGGTGCCAAGTTCTGGGAAGTTGTTTGCGCCGAGCATGGCATCGATACCACCGGGAAGTATCAGGGAGATTCCGATCTTCAGCTTGAGAGGATTAATGTCTACTACAATGAAGCTAGTTGCGGGAGGTATGTACCTCGCGCTGTTCTCATGGATCTTGAACCTGGTACCATGGACAGTATCAGATCTGGGCTTTATGGTCAGATCTTCAGGCCGGATAATTTTGTTTTTGGTCAATCTGGTGCTGGAAACAACTGGGCTAAAGGTCACTACACTGAGGGTGCTGAACTTATTGATTCCGTTCTCGATGTTGTCCGGAAGGAGGCGGAGAACTGTGATTGTTTGCAAGGGTTTCAGGTGTGTCACTCTCTAGGAGGGGGAACTGGATCTGGGATGGGTACTCTTCTGATTTCGAAGATCAGAGAAGAATATCCGGACAGGATGATGCTTACCTTCTCCGTCTTTCCATCTCCCAAAGTTTCTGATACTGTTGTTGAGCCTTACAACGCTACTCTTTCAGTTCATCAACTGGTTGAAAATGCAGATGAGTGCATGGTTCTTGACAATGAAGCTCTCTATGATATTTGCTTCCGTACCCTCAAGCTCACCACTCCAAGCTGTGAAGGTATGGACGAGATGGAGTTCACTGAGGCTGAAAGTAACATGAATGATCTGGTTTCTGAGTACCAGCAGTACCAAGACGCCACAGCCGATGAGGAATATTACGACGAAGAAGAAGAGGACCCAGAAGATAATGTGTAA

Protein sequence

MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDPEDNV

Homology

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BLAST of Cp4.1LG10g08170 vs. ExPASy Swiss-Prot
Match: P29516 (Tubulin beta-8 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB8 PE=2 SV=2)

HSP 1 Score: 455.3 bits (1170), Expect = 4.8e-127
Identity = 212/221 (95.93%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TG+YQG++DLQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

HSP 2 Score: 65.1 bits (157), Expect = 1.4e-09
Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 223 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEED 264
           EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE   E EED
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEEGYEYEED 441

[Close]

BLAST of Cp4.1LG10g08170 vs. ExPASy Swiss-Prot
Match: Q56YW9 (Tubulin beta-2 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB2 PE=2 SV=2)

HSP 1 Score: 453.0 bits (1164), Expect = 2.4e-126
Identity = 213/221 (96.38%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID TG+Y GDSDLQLERINVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

HSP 2 Score: 67.4 bits (163), Expect = 2.8e-10
Identity = 38/41 (92.68%), Postives = 38/41 (92.68%), Query Frame = 0


Query: 223 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE--YYDEEE 262
           EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE  Y DEEE
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGDYEDEEE 441

[Close]

BLAST of Cp4.1LG10g08170 vs. ExPASy Swiss-Prot
Match: Q9ASR0 (Tubulin beta-3 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB3 PE=2 SV=2)

HSP 1 Score: 453.0 bits (1164), Expect = 2.4e-126
Identity = 213/221 (96.38%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID TG+Y GDSDLQLERINVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

HSP 2 Score: 67.4 bits (163), Expect = 2.8e-10
Identity = 38/41 (92.68%), Postives = 38/41 (92.68%), Query Frame = 0


Query: 223 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE--YYDEEE 262
           EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE  Y DEEE
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGDYEDEEE 441

[Close]

BLAST of Cp4.1LG10g08170 vs. ExPASy Swiss-Prot
Match: P37392 (Tubulin beta-1 chain OS=Lupinus albus OX=3870 GN=TUBB1 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 3.1e-126
Identity = 211/221 (95.48%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TG+Y GD++LQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYGGDNELQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

HSP 2 Score: 66.6 bits (161), Expect = 4.8e-10
Identity = 35/41 (85.37%), Postives = 39/41 (95.12%), Query Frame = 0


Query: 223 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEED 264
           EGMDEMEFTEAESNMNDLVSEYQQYQDATADE+ Y+ E+E+
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEDGYEYEDEE 441

[Close]

BLAST of Cp4.1LG10g08170 vs. ExPASy Swiss-Prot
Match: Q40106 (Tubulin beta-2 chain OS=Lupinus albus OX=3870 GN=TUBB2 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 3.1e-126
Identity = 211/221 (95.48%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TG+Y+GD+ LQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYEGDNVLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGTYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

HSP 2 Score: 66.2 bits (160), Expect = 6.3e-10
Identity = 40/47 (85.11%), Postives = 40/47 (85.11%), Query Frame = 0


Query: 223 EGMDEMEFTEAESNMNDLVSEYQQYQDATADE---EYYDEEEEDPED 267
           EGMDEMEFTEAESNMNDLVSEYQQYQDATADE   EY DEEE   ED
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEDGYEYEDEEEVGEED 447

[Close]

BLAST of Cp4.1LG10g08170 vs. NCBI nr
Match: KZM86908.1 (hypothetical protein DCAR_024042 [Daucus carota subsp. sativus])

HSP 1 Score: 509 bits (1312), Expect = 1.26e-181
Identity = 249/264 (94.32%), Postives = 259/264 (98.11%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEV+CAEHGID+TG+YQGD+D+QLERINVYYNEAS  RYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICAEHGIDSTGRYQGDTDIQLERINVYYNEASSQRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDL 240

Query: 241 VSEYQQYQDATADEE--YYDEEEE 262
           VSEYQQYQDATADEE  Y+++EEE
Sbjct: 241 VSEYQQYQDATADEEGDYFEDEEE 264

[Close]

BLAST of Cp4.1LG10g08170 vs. NCBI nr
Match: PKU64640.1 (Tubulin beta-1 chain [Dendrobium catenatum])

HSP 1 Score: 506 bits (1302), Expect = 4.05e-180
Identity = 248/263 (94.30%), Postives = 255/263 (96.96%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILHVQGGQCGNQIG+KFWEVVC EHGID TG+Y G SDLQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+R+G YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDL 240

Query: 241 VSEYQQYQDATADEE--YYDEEE 261
           VSEYQQYQDATADEE  Y D+EE
Sbjct: 241 VSEYQQYQDATADEEIEYEDDEE 263

[Close]

BLAST of Cp4.1LG10g08170 vs. NCBI nr
Match: KHG25436.1 (Tubulin beta-8 chain -like protein [Gossypium arboreum])

HSP 1 Score: 505 bits (1301), Expect = 8.94e-180
Identity = 255/280 (91.07%), Postives = 261/280 (93.21%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TGKY GDSDLQLERINVYYNEASCGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGKYHGDSDLQLERINVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSC-------------EGMDE 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS              EGMDE
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSSMFRRKAFLHWYTGEGMDE 240

Query: 241 MEFTEAESNMNDLVSEYQQYQDATAD-EEYYDEEEEDPED 266
           MEFTEAESNMNDLVSEYQQYQDATAD EE Y+EEEE+ +D
Sbjct: 241 MEFTEAESNMNDLVSEYQQYQDATADDEEEYEEEEEEYQD 280

[Close]

BLAST of Cp4.1LG10g08170 vs. NCBI nr
Match: OIV95983.1 (hypothetical protein TanjilG_27087 [Lupinus angustifolius])

HSP 1 Score: 504 bits (1298), Expect = 1.48e-179
Identity = 245/262 (93.51%), Postives = 255/262 (97.33%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEV+C EHGID TGKY GD++LQLERINVYYNEAS GRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDAELQLERINVYYNEASGGRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG +GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+CEGMDEMEFTEAESNMNDL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCEGMDEMEFTEAESNMNDL 240

Query: 241 VSEYQQYQDATADEEYYDEEEE 262
           V+EYQQYQDATADEE Y++EEE
Sbjct: 241 VAEYQQYQDATADEEEYEDEEE 262

[Close]

BLAST of Cp4.1LG10g08170 vs. NCBI nr
Match: MBA0784306.1 (hypothetical protein [Gossypium trilobum])

HSP 1 Score: 503 bits (1296), Expect = 3.10e-179
Identity = 243/255 (95.29%), Postives = 249/255 (97.65%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEV+CAEHGID TG+Y GDSDLQLERINVYYNE+SCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICAEHGIDPTGRYNGDSDLQLERINVYYNESSCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSIRSG  GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSIRSGPVGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+ PSCEGMDEMEFTEAESNMNDL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSNPSCEGMDEMEFTEAESNMNDL 240

Query: 241 VSEYQQYQDATADEE 255
           VSEYQQYQDAT DEE
Sbjct: 241 VSEYQQYQDATVDEE 255

[Close]

BLAST of Cp4.1LG10g08170 vs. ExPASy TrEMBL
Match: A0A164T0W6 (Tubulin beta chain OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_024042 PE=3 SV=1)

HSP 1 Score: 509 bits (1312), Expect = 6.09e-182
Identity = 249/264 (94.32%), Postives = 259/264 (98.11%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEV+CAEHGID+TG+YQGD+D+QLERINVYYNEAS  RYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICAEHGIDSTGRYQGDTDIQLERINVYYNEASSQRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDL 240

Query: 241 VSEYQQYQDATADEE--YYDEEEE 262
           VSEYQQYQDATADEE  Y+++EEE
Sbjct: 241 VSEYQQYQDATADEEGDYFEDEEE 264

[Close]

BLAST of Cp4.1LG10g08170 vs. ExPASy TrEMBL
Match: A0A2I0VMK4 (Tubulin beta chain OS=Dendrobium catenatum OX=906689 GN=TUBB1 PE=3 SV=1)

HSP 1 Score: 506 bits (1302), Expect = 1.96e-180
Identity = 248/263 (94.30%), Postives = 255/263 (96.96%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILHVQGGQCGNQIG+KFWEVVC EHGID TG+Y G SDLQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+R+G YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDL 240

Query: 241 VSEYQQYQDATADEE--YYDEEE 261
           VSEYQQYQDATADEE  Y D+EE
Sbjct: 241 VSEYQQYQDATADEEIEYEDDEE 263

[Close]

BLAST of Cp4.1LG10g08170 vs. ExPASy TrEMBL
Match: A0A0B0PPV7 (Tubulin beta chain OS=Gossypium arboreum OX=29729 GN=F383_06752 PE=3 SV=1)

HSP 1 Score: 505 bits (1301), Expect = 4.33e-180
Identity = 255/280 (91.07%), Postives = 261/280 (93.21%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TGKY GDSDLQLERINVYYNEASCGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGKYHGDSDLQLERINVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSC-------------EGMDE 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS              EGMDE
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSSMFRRKAFLHWYTGEGMDE 240

Query: 241 MEFTEAESNMNDLVSEYQQYQDATAD-EEYYDEEEEDPED 266
           MEFTEAESNMNDLVSEYQQYQDATAD EE Y+EEEE+ +D
Sbjct: 241 MEFTEAESNMNDLVSEYQQYQDATADDEEEYEEEEEEYQD 280

[Close]

BLAST of Cp4.1LG10g08170 vs. ExPASy TrEMBL
Match: A0A4P1QVW7 (Tubulin beta chain OS=Lupinus angustifolius OX=3871 GN=TanjilG_27087 PE=3 SV=1)

HSP 1 Score: 504 bits (1298), Expect = 7.16e-180
Identity = 245/262 (93.51%), Postives = 255/262 (97.33%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEV+C EHGID TGKY GD++LQLERINVYYNEAS GRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDAELQLERINVYYNEASGGRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG +GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+CEGMDEMEFTEAESNMNDL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCEGMDEMEFTEAESNMNDL 240

Query: 241 VSEYQQYQDATADEEYYDEEEE 262
           V+EYQQYQDATADEE Y++EEE
Sbjct: 241 VAEYQQYQDATADEEEYEDEEE 262

[Close]

BLAST of Cp4.1LG10g08170 vs. ExPASy TrEMBL
Match: A0A7J9FG69 (Tubulin beta chain OS=Gossypium trilobum OX=34281 GN=Gotri_001893 PE=3 SV=1)

HSP 1 Score: 503 bits (1296), Expect = 1.50e-179
Identity = 243/255 (95.29%), Postives = 249/255 (97.65%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEV+CAEHGID TG+Y GDSDLQLERINVYYNE+SCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICAEHGIDPTGRYNGDSDLQLERINVYYNESSCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSIRSG  GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSIRSGPVGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+ PSCEGMDEMEFTEAESNMNDL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSNPSCEGMDEMEFTEAESNMNDL 240

Query: 241 VSEYQQYQDATADEE 255
           VSEYQQYQDAT DEE
Sbjct: 241 VSEYQQYQDATVDEE 255

[Close]

BLAST of Cp4.1LG10g08170 vs. TAIR 10
Match: AT5G23860.1 (tubulin beta 8 )

HSP 1 Score: 455.3 bits (1170), Expect = 3.4e-128
Identity = 212/221 (95.93%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TG+YQG++DLQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

HSP 2 Score: 65.1 bits (157), Expect = 9.9e-11
Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 223 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEED 264
           EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE   E EED
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEEGYEYEED 441

[Close]

BLAST of Cp4.1LG10g08170 vs. TAIR 10
Match: AT5G23860.2 (tubulin beta 8 )

HSP 1 Score: 455.3 bits (1170), Expect = 3.4e-128
Identity = 212/221 (95.93%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TG+YQG++DLQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

HSP 2 Score: 65.1 bits (157), Expect = 9.9e-11
Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 223 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEED 264
           EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE   E EED
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEEGYEYEED 441

[Close]

BLAST of Cp4.1LG10g08170 vs. TAIR 10
Match: AT5G62690.1 (tubulin beta chain 2 )

HSP 1 Score: 453.0 bits (1164), Expect = 1.7e-127
Identity = 213/221 (96.38%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID TG+Y GDSDLQLERINVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

HSP 2 Score: 67.4 bits (163), Expect = 2.0e-11
Identity = 38/41 (92.68%), Postives = 38/41 (92.68%), Query Frame = 0


Query: 223 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE--YYDEEE 262
           EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE  Y DEEE
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGDYEDEEE 441

[Close]

BLAST of Cp4.1LG10g08170 vs. TAIR 10
Match: AT5G62700.1 (tubulin beta chain 3 )

HSP 1 Score: 453.0 bits (1164), Expect = 1.7e-127
Identity = 213/221 (96.38%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID TG+Y GDSDLQLERINVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

HSP 2 Score: 67.4 bits (163), Expect = 2.0e-11
Identity = 38/41 (92.68%), Postives = 38/41 (92.68%), Query Frame = 0


Query: 223 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE--YYDEEE 262
           EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE  Y DEEE
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGDYEDEEE 441

[Close]

BLAST of Cp4.1LG10g08170 vs. TAIR 10
Match: AT5G12250.1 (beta-6 tubulin )

HSP 1 Score: 448.0 bits (1151), Expect = 5.4e-126
Identity = 208/221 (94.12%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEVVC EHGID TG+Y G+SDLQLER+NVYYNEASCGRYV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRA+LMDLEPGTMDS+R+G YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

HSP 2 Score: 65.9 bits (159), Expect = 5.8e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 223 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDPED 267
           EGMDEMEFTEAESNMNDLVSEYQQYQDATAD+E   EE+ED E+
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATADDEGEYEEDEDEEE 444

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g08170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29516	4.8e-127	95.93	Tubulin beta-8 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB8 PE=2 SV=2	[more]
Q56YW9	2.4e-126	96.38	Tubulin beta-2 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB2 PE=2 SV=2	[more]
Q9ASR0	2.4e-126	96.38	Tubulin beta-3 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB3 PE=2 SV=2	[more]
P37392	3.1e-126	95.48	Tubulin beta-1 chain OS=Lupinus albus OX=3870 GN=TUBB1 PE=3 SV=1	[more]
Q40106	3.1e-126	95.48	Tubulin beta-2 chain OS=Lupinus albus OX=3870 GN=TUBB2 PE=3 SV=1	[more]

BLAST of Cp4.1LG10g08170 vs. NCBI nr


Match Name	E-value	Identity	Description
KZM86908.1	1.26e-181	94.32	hypothetical protein DCAR_024042 [Daucus carota subsp. sativus]	[more]
PKU64640.1	4.05e-180	94.30	Tubulin beta-1 chain [Dendrobium catenatum]	[more]
KHG25436.1	8.94e-180	91.07	Tubulin beta-8 chain -like protein [Gossypium arboreum]	[more]
OIV95983.1	1.48e-179	93.51	hypothetical protein TanjilG_27087 [Lupinus angustifolius]	[more]
MBA0784306.1	3.10e-179	95.29	hypothetical protein [Gossypium trilobum]	[more]

BLAST of Cp4.1LG10g08170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A164T0W6	6.09e-182	94.32	Tubulin beta chain OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_024042 PE=3 ...	[more]
A0A2I0VMK4	1.96e-180	94.30	Tubulin beta chain OS=Dendrobium catenatum OX=906689 GN=TUBB1 PE=3 SV=1	[more]
A0A0B0PPV7	4.33e-180	91.07	Tubulin beta chain OS=Gossypium arboreum OX=29729 GN=F383_06752 PE=3 SV=1	[more]
A0A4P1QVW7	7.16e-180	93.51	Tubulin beta chain OS=Lupinus angustifolius OX=3871 GN=TanjilG_27087 PE=3 SV=1	[more]
A0A7J9FG69	1.50e-179	95.29	Tubulin beta chain OS=Gossypium trilobum OX=34281 GN=Gotri_001893 PE=3 SV=1	[more]

BLAST of Cp4.1LG10g08170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23860.1	3.4e-128	95.93	tubulin beta 8	[more]
AT5G23860.2	3.4e-128	95.93	tubulin beta 8	[more]
AT5G62690.1	1.7e-127	96.38	tubulin beta chain 2	[more]
AT5G62700.1	1.7e-127	96.38	tubulin beta chain 3	[more]
AT5G12250.1	5.4e-126	94.12	beta-6 tubulin	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 230..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..268
None	No IPR available	PANTHER	PTHR11588:SF351	TUBULIN BETA-2 CHAIN	coord: 1..222 coord: 222..263
None	No IPR available	CDD	cd02187	beta_tubulin	coord: 2..244 e-value: 1.79364E-152 score: 430.064
IPR000217	Tubulin	PRINTS	PR01161	TUBULIN	coord: 10..30 score: 71.41 coord: 176..189 score: 79.11 coord: 106..130 score: 70.19 coord: 132..150 score: 79.04 coord: 93..104 score: 76.26 coord: 151..172 score: 59.63 coord: 190..210 score: 67.82 coord: 51..70 score: 66.6
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 1..222 coord: 222..263
IPR002453	Beta tubulin	PRINTS	PR01163	BETATUBULIN	coord: 212..224 score: 63.52 coord: 152..164 score: 91.43 coord: 88..99 score: 94.76 coord: 41..58 score: 78.7 coord: 108..126 score: 87.58
IPR003008	Tubulin/FtsZ, GTPase domain	SMART	SM00864	Tubulin_4	coord: 47..249 e-value: 7.7E-53 score: 191.5
IPR003008	Tubulin/FtsZ, GTPase domain	PFAM	PF00091	Tubulin	coord: 3..211 e-value: 3.3E-70 score: 236.3
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	GENE3D	3.40.50.1440	Tubulin/FtsZ, GTPase domain	coord: 1..252 e-value: 1.3E-111 score: 374.4
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	SUPERFAMILY	52490	Tubulin nucleotide-binding domain-like	coord: 1..228
IPR013838	Beta tubulin, autoregulation binding site	PROSITE	PS00228	TUBULIN_B_AUTOREG	coord: 1..4
IPR017975	Tubulin, conserved site	PROSITE	PS00227	TUBULIN	coord: 140..146
IPR008280	Tubulin/FtsZ, C-terminal	SUPERFAMILY	55307	Tubulin C-terminal domain-like	coord: 223..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g08170.1	Cp4.1LG10g08170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0007017	microtubule-based process
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005874	microtubule
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005200	structural constituent of cytoskeleton