Cp4.1LG10g07730 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g07730
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	PRA1 family protein
Location	Cp4.1LG10: 5518077 .. 5518697 (-)
RNA-Seq Expression	Cp4.1LG10g07730
Synteny	Cp4.1LG10g07730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTCCTCTTCTCCGGCCATCCTCCCTGTTTCCAATTCCGAATCTCAACCTCAAATCCCCCTTTCCTCATTCGCCAGCCACATCTTCCTCTCCCTCCGCCACGCCTTCTCCCGTCGCCGCCCTTGGCCGGAGCTCCTAGATCGCTCCGCCTTCTCCAAGCCAGAGTCCCTCTCCGAAGCCACACTCCGCATCCGCAAGAACTACACCTATTTCCGCGTTAATTATTTCGCGATTATAGCCCTAATTCTTGCGTTTTCATTTTTCTCAAATCCTTCGTCTCTGTTCCTCTTGATCGCGCTTCTTTCCTCTTGGATCTTCCTCTACCTCTTCCGCCCTTCCGATCAGCCACTTGTTCTGTTCGGCCGGTTGTTCAGAGACAGCGAGATCTTGATTGGCCTTGTTGTTTTCACCGCCTGTGTTATTTTCCTCACCAGCGTCGGATCCGTTCTTGTTTCGTCCCTCACCGCCGGTGCCGCTGTCGTCTGCGCTCACGGCGCTCTCCGATCTCCCGATGATCTGTTCCTTGATGAACAGGAAGTTAACTCCACTGGATTTCTTGGTTTATTCGCCGGCGCCCCCTCTGCTGCCGCCGCCTCCGCCGCTCCTTCCGGCGCGTAA

mRNA sequence

ATGCCGTCCTCTTCTCCGGCCATCCTCCCTGTTTCCAATTCCGAATCTCAACCTCAAATCCCCCTTTCCTCATTCGCCAGCCACATCTTCCTCTCCCTCCGCCACGCCTTCTCCCGTCGCCGCCCTTGGCCGGAGCTCCTAGATCGCTCCGCCTTCTCCAAGCCAGAGTCCCTCTCCGAAGCCACACTCCGCATCCGCAAGAACTACACCTATTTCCGCGTTAATTATTTCGCGATTATAGCCCTAATTCTTGCGTTTTCATTTTTCTCAAATCCTTCGTCTCTGTTCCTCTTGATCGCGCTTCTTTCCTCTTGGATCTTCCTCTACCTCTTCCGCCCTTCCGATCAGCCACTTGTTCTGTTCGGCCGGTTGTTCAGAGACAGCGAGATCTTGATTGGCCTTGTTGTTTTCACCGCCTGTGTTATTTTCCTCACCAGCGTCGGATCCGTTCTTGTTTCGTCCCTCACCGCCGGTGCCGCTGTCGTCTGCGCTCACGGCGCTCTCCGATCTCCCGATGATCTGTTCCTTGATGAACAGGAAGTTAACTCCACTGGATTTCTTGGTTTATTCGCCGGCGCCCCCTCTGCTGCCGCCGCCTCCGCCGCTCCTTCCGGCGCGTAA

Coding sequence (CDS)

ATGCCGTCCTCTTCTCCGGCCATCCTCCCTGTTTCCAATTCCGAATCTCAACCTCAAATCCCCCTTTCCTCATTCGCCAGCCACATCTTCCTCTCCCTCCGCCACGCCTTCTCCCGTCGCCGCCCTTGGCCGGAGCTCCTAGATCGCTCCGCCTTCTCCAAGCCAGAGTCCCTCTCCGAAGCCACACTCCGCATCCGCAAGAACTACACCTATTTCCGCGTTAATTATTTCGCGATTATAGCCCTAATTCTTGCGTTTTCATTTTTCTCAAATCCTTCGTCTCTGTTCCTCTTGATCGCGCTTCTTTCCTCTTGGATCTTCCTCTACCTCTTCCGCCCTTCCGATCAGCCACTTGTTCTGTTCGGCCGGTTGTTCAGAGACAGCGAGATCTTGATTGGCCTTGTTGTTTTCACCGCCTGTGTTATTTTCCTCACCAGCGTCGGATCCGTTCTTGTTTCGTCCCTCACCGCCGGTGCCGCTGTCGTCTGCGCTCACGGCGCTCTCCGATCTCCCGATGATCTGTTCCTTGATGAACAGGAAGTTAACTCCACTGGATTTCTTGGTTTATTCGCCGGCGCCCCCTCTGCTGCCGCCGCCTCCGCCGCTCCTTCCGGCGCGTAA

Protein sequence

MPSSSPAILPVSNSESQPQIPLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQEVNSTGFLGLFAGAPSAAAASAAPSGA

Homology

[Close]

BLAST of Cp4.1LG10g07730 vs. ExPASy Swiss-Prot
Match: Q9SIY7 (PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-53
Identity = 118/210 (56.19%), Postives = 156/210 (74.29%), Query Frame = 0


Query: 3   SSSPAILPVSNSE--SQPQIPLSSFASHIFL-----SLRHAFSRRRPWPELLDRSAFSKP 62
           SSSPAILPV+N +  +Q Q P++S A   FL     SLR + S+RRPW EL+DRS+F++P
Sbjct: 2   SSSPAILPVTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARP 61

Query: 63  ESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSD 122
           +SL+++  RIRKN  YF+VNY AI++L+LAFS  S+P SL +L++LL SW+FLYLFR SD
Sbjct: 62  DSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSD 121

Query: 123 QPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLF 182
           QPLVLFGR F D E L+GLV+ T  V+F+TSVGS+L S+LT G A+VC HGA R PDDLF
Sbjct: 122 QPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLF 181

Query: 183 LDEQEVNSTGFLGLFAGAPSAAAASAAPSG 206
           LDEQE  + G L     + + +AA++  +G
Sbjct: 182 LDEQEPANAGLLSFIGNSAATSAAASVVAG 211

[Close]

BLAST of Cp4.1LG10g07730 vs. ExPASy Swiss-Prot
Match: O80915 (PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.3e-52
Identity = 114/212 (53.77%), Postives = 149/212 (70.28%), Query Frame = 0


Query: 1   MPSSSPAILPVSNS-----------ESQPQI---PLSSFASHIFLSLRHAFSRRRPWPEL 60
           M SS+P +LP+SN            ESQP I      +F + I  ++++  S+RRPW EL
Sbjct: 1   MASSAPPVLPISNPQTVPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAEL 60

Query: 61  LDRSAFSKPESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWI 120
            DRSA SKPES+S+A +RIRKNY+YF+VNY  +   I+ FS  ++P SL  L+ LL+SW+
Sbjct: 61  ADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWL 120

Query: 121 FLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHG 180
           FLYLFRP+DQP+VLFGR F D E L  L++F+  VIFLT VGSVLVS++  G A++CAHG
Sbjct: 121 FLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHG 180

Query: 181 ALRSPDDLFLDEQEVNSTGFLGLFAGAPSAAA 199
           A R+P+DLFLDEQE  +TGFL    GA S+AA
Sbjct: 181 AFRAPEDLFLDEQEPAATGFLSFLGGAASSAA 212

[Close]

BLAST of Cp4.1LG10g07730 vs. ExPASy Swiss-Prot
Match: Q9LYN0 (PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-50
Identity = 115/208 (55.29%), Postives = 147/208 (70.67%), Query Frame = 0


Query: 4   SSPAILPVSNS---ESQPQI---PLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPES 63
           ++P  LPV+N    +SQP I      +F S +  S+R   S+RRPW EL+DRS+ ++PES
Sbjct: 2   ATPPTLPVTNQQAVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPES 61

Query: 64  LSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQP 123
           L++A  RIRKN  YF+VNY AI++L+LAFS FS+P SL +LI LL  W+FLYLFRPSDQP
Sbjct: 62  LTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQP 121

Query: 124 LVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLD 183
           LV+FGR F D E L+ LV+ T  V+F+TSVGS+L S+L  G A+VC HGA   PDDLFLD
Sbjct: 122 LVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLD 181

Query: 184 EQEVNSTGFLGLFAGAPSAAAASAAPSG 206
           EQE  + G L    G  SA +A+AA SG
Sbjct: 182 EQEPANAGLLSFLGG--SATSAAAAVSG 207

[Close]

BLAST of Cp4.1LG10g07730 vs. ExPASy Swiss-Prot
Match: Q9M012 (PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-48
Identity = 116/221 (52.49%), Postives = 150/221 (67.87%), Query Frame = 0


Query: 1   MPSSSPAILPVSNS---------------ESQPQIPLSSFASHIFLSLRHAFSRRRPWPE 60
           M S++P +LP+S +               ESQP + + +F + +  ++    SR RPW E
Sbjct: 1   MVSTNPPVLPISTTATDTTNQPPIVTAVVESQPPV-VRAFVNGVTETVCGGLSRSRPWSE 60

Query: 61  LLDRSAFSKPESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSW 120
           LLDRSAF+KP+SLSEA  R RKN +YFRVNY  I+ALIL FS  ++P SL LL+ L +SW
Sbjct: 61  LLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASW 120

Query: 121 IFLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAH 180
           +FLYLFRPSD+PL+LFGR F + E L GL++ T  VIF TSVGSVL+S+L  G A +C H
Sbjct: 121 LFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVH 180

Query: 181 GALRSPDDLFLDEQEVNSTGFLGLFAGAPSAAAASAAPSGA 207
           GA R+PDDLFLDEQ+  ++GFL  F G P  A  S APS +
Sbjct: 181 GAFRAPDDLFLDEQDHAASGFLS-FIGVP--AIPSVAPSAS 217

[Close]

BLAST of Cp4.1LG10g07730 vs. ExPASy Swiss-Prot
Match: Q9FLB6 (PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-47
Identity = 110/211 (52.13%), Postives = 147/211 (69.67%), Query Frame = 0


Query: 4   SSPAILPVSNSE---SQPQIPLS-----SFASHIFLSLRHAFSRRRPWPELLDRSAFSKP 63
           ++P  LP+S+     SQ Q P+S     +F S +  S+R + S+RRPW EL+DRSA S+P
Sbjct: 3   ANPPTLPISDHSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRP 62

Query: 64  ESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSD 123
           ESL++A  RIR+N  YF+VNY  I++L+LA S  S+P SL +L+ L  +WIFLYLFRPSD
Sbjct: 63  ESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSD 122

Query: 124 QPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLF 183
           QPLV+ GR F D E L  LV+ T  V+FLTSVGS+L S+L  G  +VC HGA R P+DLF
Sbjct: 123 QPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLF 182

Query: 184 LDEQEVNSTGFLGLFAGAPSAAAASAAPSGA 207
           LD+QE  +TG L   +GA ++AA +AA + A
Sbjct: 183 LDDQEPANTGLLSFLSGAATSAAVAAASTPA 213

[Close]

BLAST of Cp4.1LG10g07730 vs. NCBI nr
Match: XP_023544736.1 (PRA1 family protein B2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 376 bits (965), Expect = 8.24e-131
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MPSSSPAILPVSNSESQPQIPLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60
           MPSSSPAILPVSNSESQPQIPLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPESLSE
Sbjct: 1   MPSSSPAILPVSNSESQPQIPLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60

Query: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120
           ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL
Sbjct: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120

Query: 121 FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180
           FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE
Sbjct: 121 FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180

Query: 181 VNSTGFLGLFAGAPSAAAASAAPSGA 206
           VNSTGFLGLFAGAPSAAAASAAPSGA
Sbjct: 181 VNSTGFLGLFAGAPSAAAASAAPSGA 206

[Close]

BLAST of Cp4.1LG10g07730 vs. NCBI nr
Match: XP_022949813.1 (PRA1 family protein B2-like [Cucurbita moschata] >KAG6603559.1 PRA1 family protein B4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033749.1 PRA1 family protein B4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 369 bits (948), Expect = 3.10e-128
Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MPSSSPAILPVSNSESQPQIPLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60
           MPSSSPAILPVSNSESQPQIPLSSFASH+FLSLRHAFSRRRPWPELLDRSAFSKPESLSE
Sbjct: 1   MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60

Query: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120
           ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL
Sbjct: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120

Query: 121 FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180
           FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE
Sbjct: 121 FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180

Query: 181 VNSTGFLGLFAGAPSAAAASAAPSGA 206
           VNSTGFLGLFAGAPSAAA SAAPSGA
Sbjct: 181 VNSTGFLGLFAGAPSAAA-SAAPSGA 205

[Close]

BLAST of Cp4.1LG10g07730 vs. NCBI nr
Match: XP_022978285.1 (PRA1 family protein B2-like [Cucurbita maxima])

HSP 1 Score: 368 bits (945), Expect = 8.89e-128
Identity = 202/206 (98.06%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MPSSSPAILPVSNSESQPQIPLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60
           MPSSSPAILPVSNSESQPQIPLSSFASH+FLSLRHAFSRRRPWPELLDRSAFSKPESLSE
Sbjct: 1   MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60

Query: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120
           ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL
Sbjct: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120

Query: 121 FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180
           FGRLFRDSEILIGLVVFTAC+IFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE
Sbjct: 121 FGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180

Query: 181 VNSTGFLGLFAGAPSAAAASAAPSGA 206
           VNSTGFLGLFAGAPSAAAA+A PSGA
Sbjct: 181 VNSTGFLGLFAGAPSAAAATA-PSGA 205

[Close]

BLAST of Cp4.1LG10g07730 vs. NCBI nr
Match: XP_004148598.2 (PRA1 family protein B2 [Cucumis sativus])

HSP 1 Score: 332 bits (850), Expect = 3.40e-113
Identity = 177/204 (86.76%), Postives = 193/204 (94.61%), Query Frame = 0


Query: 3   SSSPAILPVSNSESQPQIPLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPESLSEAT 62
           S+SP ILP+SN +SQPQIPLSSF+SH+ LSLRHAFSRRRPWPELLDRSAFSKPESLSEAT
Sbjct: 4   SASPVILPISNPQSQPQIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPESLSEAT 63

Query: 63  LRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVLFG 122
           LRIRKNY+YFRVNYF IIALILA S FSNPSSLFLLIALL SWIFLYLFRPSDQPLVLFG
Sbjct: 64  LRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQPLVLFG 123

Query: 123 RLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQEVN 182
           R FRDSEILIGLVVFTACV+FLTSVGSVLVS+ TAG AVVCAHGALRSPDDLFLDEQEVN
Sbjct: 124 RHFRDSEILIGLVVFTACVVFLTSVGSVLVSAFTAGFAVVCAHGALRSPDDLFLDEQEVN 183

Query: 183 STGFLGLFAGAPSAAAASAAPSGA 206
           +TGFLG+FAGAPS++++S++ SGA
Sbjct: 184 TTGFLGIFAGAPSSSSSSSSSSGA 207

[Close]

BLAST of Cp4.1LG10g07730 vs. NCBI nr
Match: XP_008464234.1 (PREDICTED: PRA1 family protein B2 [Cucumis melo] >KAA0037713.1 PRA1 family protein B2 [Cucumis melo var. makuwa] >TYK10948.1 PRA1 family protein B2 [Cucumis melo var. makuwa])

HSP 1 Score: 330 bits (846), Expect = 1.08e-112
Identity = 175/201 (87.06%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MPSSSPAILPVSNSESQPQIPLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60
           M S SPAILP+SN +SQP IPLSSF+SH+ LSLRHAFSRRRPWPELLDRSAFSKPESL+E
Sbjct: 1   MQSPSPAILPISNPQSQPHIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPESLTE 60

Query: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120
           ATLRIRKNY+YFRVNYF IIALILA S FSNPSSLFLLIALL SWIFLYLFRPSDQPLVL
Sbjct: 61  ATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQPLVL 120

Query: 121 FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180
           FGRLFRDSEILIGL+VFTACV+F TSVGSVLVS+LTAG AVVCAHGALRSPDDLFLDEQE
Sbjct: 121 FGRLFRDSEILIGLLVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDEQE 180

Query: 181 VNSTGFLGLFAGAPSAAAASA 201
           VNSTGFLG+FAG PS+++A+A
Sbjct: 181 VNSTGFLGIFAGPPSSSSAAA 201

[Close]

BLAST of Cp4.1LG10g07730 vs. ExPASy TrEMBL
Match: A0A6J1GD57 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111453097 PE=3 SV=1)

HSP 1 Score: 369 bits (948), Expect = 1.50e-128
Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MPSSSPAILPVSNSESQPQIPLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60
           MPSSSPAILPVSNSESQPQIPLSSFASH+FLSLRHAFSRRRPWPELLDRSAFSKPESLSE
Sbjct: 1   MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60

Query: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120
           ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL
Sbjct: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120

Query: 121 FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180
           FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE
Sbjct: 121 FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180

Query: 181 VNSTGFLGLFAGAPSAAAASAAPSGA 206
           VNSTGFLGLFAGAPSAAA SAAPSGA
Sbjct: 181 VNSTGFLGLFAGAPSAAA-SAAPSGA 205

[Close]

BLAST of Cp4.1LG10g07730 vs. ExPASy TrEMBL
Match: A0A6J1IPN2 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111478318 PE=3 SV=1)

HSP 1 Score: 368 bits (945), Expect = 4.30e-128
Identity = 202/206 (98.06%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MPSSSPAILPVSNSESQPQIPLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60
           MPSSSPAILPVSNSESQPQIPLSSFASH+FLSLRHAFSRRRPWPELLDRSAFSKPESLSE
Sbjct: 1   MPSSSPAILPVSNSESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60

Query: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120
           ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL
Sbjct: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120

Query: 121 FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180
           FGRLFRDSEILIGLVVFTAC+IFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE
Sbjct: 121 FGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180

Query: 181 VNSTGFLGLFAGAPSAAAASAAPSGA 206
           VNSTGFLGLFAGAPSAAAA+A PSGA
Sbjct: 181 VNSTGFLGLFAGAPSAAAATA-PSGA 205

[Close]

BLAST of Cp4.1LG10g07730 vs. ExPASy TrEMBL
Match: A0A0A0KXP8 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G314420 PE=3 SV=1)

HSP 1 Score: 332 bits (850), Expect = 1.65e-113
Identity = 177/204 (86.76%), Postives = 193/204 (94.61%), Query Frame = 0


Query: 3   SSSPAILPVSNSESQPQIPLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPESLSEAT 62
           S+SP ILP+SN +SQPQIPLSSF+SH+ LSLRHAFSRRRPWPELLDRSAFSKPESLSEAT
Sbjct: 4   SASPVILPISNPQSQPQIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPESLSEAT 63

Query: 63  LRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVLFG 122
           LRIRKNY+YFRVNYF IIALILA S FSNPSSLFLLIALL SWIFLYLFRPSDQPLVLFG
Sbjct: 64  LRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQPLVLFG 123

Query: 123 RLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQEVN 182
           R FRDSEILIGLVVFTACV+FLTSVGSVLVS+ TAG AVVCAHGALRSPDDLFLDEQEVN
Sbjct: 124 RHFRDSEILIGLVVFTACVVFLTSVGSVLVSAFTAGFAVVCAHGALRSPDDLFLDEQEVN 183

Query: 183 STGFLGLFAGAPSAAAASAAPSGA 206
           +TGFLG+FAGAPS++++S++ SGA
Sbjct: 184 TTGFLGIFAGAPSSSSSSSSSSGA 207

[Close]

BLAST of Cp4.1LG10g07730 vs. ExPASy TrEMBL
Match: A0A5D3CIC6 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00310 PE=3 SV=1)

HSP 1 Score: 330 bits (846), Expect = 5.25e-113
Identity = 175/201 (87.06%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MPSSSPAILPVSNSESQPQIPLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60
           M S SPAILP+SN +SQP IPLSSF+SH+ LSLRHAFSRRRPWPELLDRSAFSKPESL+E
Sbjct: 1   MQSPSPAILPISNPQSQPHIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPESLTE 60

Query: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120
           ATLRIRKNY+YFRVNYF IIALILA S FSNPSSLFLLIALL SWIFLYLFRPSDQPLVL
Sbjct: 61  ATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQPLVL 120

Query: 121 FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180
           FGRLFRDSEILIGL+VFTACV+F TSVGSVLVS+LTAG AVVCAHGALRSPDDLFLDEQE
Sbjct: 121 FGRLFRDSEILIGLLVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDEQE 180

Query: 181 VNSTGFLGLFAGAPSAAAASA 201
           VNSTGFLG+FAG PS+++A+A
Sbjct: 181 VNSTGFLGIFAGPPSSSSAAA 201

[Close]

BLAST of Cp4.1LG10g07730 vs. ExPASy TrEMBL
Match: A0A1S3CMI9 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103502166 PE=3 SV=1)

HSP 1 Score: 330 bits (846), Expect = 5.25e-113
Identity = 175/201 (87.06%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MPSSSPAILPVSNSESQPQIPLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPESLSE 60
           M S SPAILP+SN +SQP IPLSSF+SH+ LSLRHAFSRRRPWPELLDRSAFSKPESL+E
Sbjct: 1   MQSPSPAILPISNPQSQPHIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPESLTE 60

Query: 61  ATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 120
           ATLRIRKNY+YFRVNYF IIALILA S FSNPSSLFLLIALL SWIFLYLFRPSDQPLVL
Sbjct: 61  ATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQPLVL 120

Query: 121 FGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDEQE 180
           FGRLFRDSEILIGL+VFTACV+F TSVGSVLVS+LTAG AVVCAHGALRSPDDLFLDEQE
Sbjct: 121 FGRLFRDSEILIGLLVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDEQE 180

Query: 181 VNSTGFLGLFAGAPSAAAASA 201
           VNSTGFLG+FAG PS+++A+A
Sbjct: 181 VNSTGFLGIFAGPPSSSSAAA 201

[Close]

BLAST of Cp4.1LG10g07730 vs. TAIR 10
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2 )

HSP 1 Score: 211.1 bits (536), Expect = 8.6e-55
Identity = 118/210 (56.19%), Postives = 156/210 (74.29%), Query Frame = 0


Query: 3   SSSPAILPVSNSE--SQPQIPLSSFASHIFL-----SLRHAFSRRRPWPELLDRSAFSKP 62
           SSSPAILPV+N +  +Q Q P++S A   FL     SLR + S+RRPW EL+DRS+F++P
Sbjct: 2   SSSPAILPVTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARP 61

Query: 63  ESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSD 122
           +SL+++  RIRKN  YF+VNY AI++L+LAFS  S+P SL +L++LL SW+FLYLFR SD
Sbjct: 62  DSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSD 121

Query: 123 QPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLF 182
           QPLVLFGR F D E L+GLV+ T  V+F+TSVGS+L S+LT G A+VC HGA R PDDLF
Sbjct: 122 QPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLF 181

Query: 183 LDEQEVNSTGFLGLFAGAPSAAAASAAPSG 206
           LDEQE  + G L     + + +AA++  +G
Sbjct: 182 LDEQEPANAGLLSFIGNSAATSAAASVVAG 211

[Close]

BLAST of Cp4.1LG10g07730 vs. TAIR 10
Match: AT2G38360.1 (prenylated RAB acceptor 1.B4 )

HSP 1 Score: 206.8 bits (525), Expect = 1.6e-53
Identity = 114/212 (53.77%), Postives = 149/212 (70.28%), Query Frame = 0


Query: 1   MPSSSPAILPVSNS-----------ESQPQI---PLSSFASHIFLSLRHAFSRRRPWPEL 60
           M SS+P +LP+SN            ESQP I      +F + I  ++++  S+RRPW EL
Sbjct: 1   MASSAPPVLPISNPQTVPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAEL 60

Query: 61  LDRSAFSKPESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWI 120
            DRSA SKPES+S+A +RIRKNY+YF+VNY  +   I+ FS  ++P SL  L+ LL+SW+
Sbjct: 61  ADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWL 120

Query: 121 FLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHG 180
           FLYLFRP+DQP+VLFGR F D E L  L++F+  VIFLT VGSVLVS++  G A++CAHG
Sbjct: 121 FLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHG 180

Query: 181 ALRSPDDLFLDEQEVNSTGFLGLFAGAPSAAA 199
           A R+P+DLFLDEQE  +TGFL    GA S+AA
Sbjct: 181 AFRAPEDLFLDEQEPAATGFLSFLGGAASSAA 212

[Close]

BLAST of Cp4.1LG10g07730 vs. TAIR 10
Match: AT3G56110.1 (prenylated RAB acceptor 1.B1 )

HSP 1 Score: 201.1 bits (510), Expect = 8.9e-52
Identity = 115/208 (55.29%), Postives = 147/208 (70.67%), Query Frame = 0


Query: 4   SSPAILPVSNS---ESQPQI---PLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPES 63
           ++P  LPV+N    +SQP I      +F S +  S+R   S+RRPW EL+DRS+ ++PES
Sbjct: 2   ATPPTLPVTNQQAVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPES 61

Query: 64  LSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQP 123
           L++A  RIRKN  YF+VNY AI++L+LAFS FS+P SL +LI LL  W+FLYLFRPSDQP
Sbjct: 62  LTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQP 121

Query: 124 LVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLD 183
           LV+FGR F D E L+ LV+ T  V+F+TSVGS+L S+L  G A+VC HGA   PDDLFLD
Sbjct: 122 LVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLD 181

Query: 184 EQEVNSTGFLGLFAGAPSAAAASAAPSG 206
           EQE  + G L    G  SA +A+AA SG
Sbjct: 182 EQEPANAGLLSFLGG--SATSAAAAVSG 207

[Close]

BLAST of Cp4.1LG10g07730 vs. TAIR 10
Match: AT3G56110.2 (prenylated RAB acceptor 1.B1 )

HSP 1 Score: 201.1 bits (510), Expect = 8.9e-52
Identity = 115/208 (55.29%), Postives = 147/208 (70.67%), Query Frame = 0


Query: 4   SSPAILPVSNS---ESQPQI---PLSSFASHIFLSLRHAFSRRRPWPELLDRSAFSKPES 63
           ++P  LPV+N    +SQP I      +F S +  S+R   S+RRPW EL+DRS+ ++PES
Sbjct: 2   ATPPTLPVTNQQAVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPES 61

Query: 64  LSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQP 123
           L++A  RIRKN  YF+VNY AI++L+LAFS FS+P SL +LI LL  W+FLYLFRPSDQP
Sbjct: 62  LTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQP 121

Query: 124 LVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLD 183
           LV+FGR F D E L+ LV+ T  V+F+TSVGS+L S+L  G A+VC HGA   PDDLFLD
Sbjct: 122 LVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLD 181

Query: 184 EQEVNSTGFLGLFAGAPSAAAASAAPSG 206
           EQE  + G L    G  SA +A+AA SG
Sbjct: 182 EQEPANAGLLSFLGG--SATSAAAAVSG 207

[Close]

BLAST of Cp4.1LG10g07730 vs. TAIR 10
Match: AT5G01640.1 (prenylated RAB acceptor 1.B5 )

HSP 1 Score: 194.5 bits (493), Expect = 8.3e-50
Identity = 116/221 (52.49%), Postives = 150/221 (67.87%), Query Frame = 0


Query: 1   MPSSSPAILPVSNS---------------ESQPQIPLSSFASHIFLSLRHAFSRRRPWPE 60
           M S++P +LP+S +               ESQP + + +F + +  ++    SR RPW E
Sbjct: 1   MVSTNPPVLPISTTATDTTNQPPIVTAVVESQPPV-VRAFVNGVTETVCGGLSRSRPWSE 60

Query: 61  LLDRSAFSKPESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSW 120
           LLDRSAF+KP+SLSEA  R RKN +YFRVNY  I+ALIL FS  ++P SL LL+ L +SW
Sbjct: 61  LLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASW 120

Query: 121 IFLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAH 180
           +FLYLFRPSD+PL+LFGR F + E L GL++ T  VIF TSVGSVL+S+L  G A +C H
Sbjct: 121 LFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVH 180

Query: 181 GALRSPDDLFLDEQEVNSTGFLGLFAGAPSAAAASAAPSGA 207
           GA R+PDDLFLDEQ+  ++GFL  F G P  A  S APS +
Sbjct: 181 GAFRAPDDLFLDEQDHAASGFLS-FIGVP--AIPSVAPSAS 217

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g07730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIY7	1.2e-53	56.19	PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1	[more]
O80915	2.3e-52	53.77	PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1	[more]
Q9LYN0	1.3e-50	55.29	PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1	[more]
Q9M012	1.2e-48	52.49	PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1	[more]
Q9FLB6	1.3e-47	52.13	PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1	[more]

BLAST of Cp4.1LG10g07730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023544736.1	8.24e-131	100.00	PRA1 family protein B2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949813.1	3.10e-128	99.03	PRA1 family protein B2-like [Cucurbita moschata] >KAG6603559.1 PRA1 family prote...	[more]
XP_022978285.1	8.89e-128	98.06	PRA1 family protein B2-like [Cucurbita maxima]	[more]
XP_004148598.2	3.40e-113	86.76	PRA1 family protein B2 [Cucumis sativus]	[more]
XP_008464234.1	1.08e-112	87.06	PREDICTED: PRA1 family protein B2 [Cucumis melo] >KAA0037713.1 PRA1 family prote...	[more]

BLAST of Cp4.1LG10g07730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GD57	1.50e-128	99.03	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111453097 PE=3 SV=1	[more]
A0A6J1IPN2	4.30e-128	98.06	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111478318 PE=3 SV=1	[more]
A0A0A0KXP8	1.65e-113	86.76	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G314420 PE=3 SV=1	[more]
A0A5D3CIC6	5.25e-113	87.06	PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G...	[more]
A0A1S3CMI9	5.25e-113	87.06	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103502166 PE=3 SV=1	[more]

BLAST of Cp4.1LG10g07730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40380.1	8.6e-55	56.19	prenylated RAB acceptor 1.B2	[more]
AT2G38360.1	1.6e-53	53.77	prenylated RAB acceptor 1.B4	[more]
AT3G56110.1	8.9e-52	55.29	prenylated RAB acceptor 1.B1	[more]
AT3G56110.2	8.9e-52	55.29	prenylated RAB acceptor 1.B1	[more]
AT5G01640.1	8.3e-50	52.49	prenylated RAB acceptor 1.B5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 36..179 e-value: 2.1E-46 score: 157.1
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..203
None	No IPR available	PANTHER	PTHR19317:SF34	PRA1 FAMILY PROTEIN-RELATED	coord: 1..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g07730.1	Cp4.1LG10g07730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane