Cp4.1LG10g07660 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGTCCTCCAGATTTGGGGATTCCATCACGATATTGATGTGCGTTGCTCTCAGAAAAACCTCGCTAATCTTCCGTCACGTTTCGATCTTAATCACCGATCTCATCGCCGTCGCCGCCTCCGCCATCAGATTCTCCCGCTGGTTTCTCCGCCCAACCGTACAGCTTTCCGAAAGGTACTCTACAATGTCGTTGATGATTATTCGCAACGATCGTTGA ATGTCGTCCTCCAGATTTGGGGATTCCATCACGATATTGATGTGCGTTGCTCTCAGAAAAACCTCGCTAATCTTCCGTCACGTTTCGATCTTAATCACCGATCTCATCGCCGTCGCCGCCTCCGCCATCAGATTCTCCCGCTGGTTTCTCCGCCCAACCGTACAGCTTTCCGAAAGGTACTCTACAATGTCGTTGATGATTATTCGCAACGATCGTTGA ATGTCGTCCTCCAGATTTGGGGATTCCATCACGATATTGATGTGCGTTGCTCTCAGAAAAACCTCGCTAATCTTCCGTCACGTTTCGATCTTAATCACCGATCTCATCGCCGTCGCCGCCTCCGCCATCAGATTCTCCCGCTGGTTTCTCCGCCCAACCGTACAGCTTTCCGAAAGGTACTCTACAATGTCGTTGATGATTATTCGCAACGATCGTTGA MSSSRFGDSITILMCVALRKTSLIFRHVSILITDLIAVAASAIRFSRWFLRPTVQLSERYSTMSLMIIRNDR Homology
BLAST of Cp4.1LG10g07660 vs. NCBI nr
Match: KAG6603548.1 (hypothetical protein SDJN03_04157, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 135 bits (340), Expect = 8.36e-40 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Cp4.1LG10g07660 vs. NCBI nr
Match: KAG6595568.1 (hypothetical protein SDJN03_12121, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 70.1 bits (170), Expect = 7.41e-14 Identity = 41/57 (71.93%), Postives = 47/57 (82.46%), Query Frame = 0
BLAST of Cp4.1LG10g07660 vs. NCBI nr
Match: KGN54430.1 (hypothetical protein Csa_012790 [Cucumis sativus]) HSP 1 Score: 64.7 bits (156), Expect = 1.13e-11 Identity = 41/75 (54.67%), Postives = 51/75 (68.00%), Query Frame = 0
BLAST of Cp4.1LG10g07660 vs. NCBI nr
Match: DAD26394.1 (TPA_asm: hypothetical protein HUJ06_027862 [Nelumbo nucifera]) HSP 1 Score: 52.8 bits (125), Expect = 6.47e-07 Identity = 32/68 (47.06%), Postives = 41/68 (60.29%), Query Frame = 0
BLAST of Cp4.1LG10g07660 vs. NCBI nr
Match: KAG2691069.1 (hypothetical protein I3760_09G218300 [Carya illinoinensis] >KAG6643519.1 hypothetical protein CIPAW_09G217300 [Carya illinoinensis] >KAG6697850.1 hypothetical protein I3842_09G221200 [Carya illinoinensis] >KAG6697851.1 hypothetical protein I3842_09G221200 [Carya illinoinensis] >KAG7965254.1 hypothetical protein I3843_09G213500 [Carya illinoinensis]) HSP 1 Score: 49.7 bits (117), Expect = 8.17e-06 Identity = 30/67 (44.78%), Postives = 42/67 (62.69%), Query Frame = 0
BLAST of Cp4.1LG10g07660 vs. ExPASy TrEMBL
Match: A0A0A0KXR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G326540 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 5.49e-12 Identity = 41/75 (54.67%), Postives = 51/75 (68.00%), Query Frame = 0
BLAST of Cp4.1LG10g07660 vs. ExPASy TrEMBL
Match: A0A7N2M690 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.12e-10 Identity = 30/65 (46.15%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of Cp4.1LG10g07660 vs. ExPASy TrEMBL
Match: M1BFB8 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.56e-05 Identity = 27/70 (38.57%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of Cp4.1LG10g07660 vs. ExPASy TrEMBL
Match: A0A314L987 (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_21077 PE=4 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 6.30e-05 Identity = 29/70 (41.43%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of Cp4.1LG10g07660 vs. ExPASy TrEMBL
Match: A0A2P6R8L3 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0461331 PE=4 SV=1) HSP 1 Score: 43.9 bits (102), Expect = 7.70e-04 Identity = 30/73 (41.10%), Postives = 47/73 (64.38%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|