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Cp4.1LG10g07280 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAACGAAAGAAGTTAGTTAGAGAAGAGAGAAAGAAGAACAAAGCTGCCAATTCTCTCGGCATTCGATTCATTTTCGAGGCGGAAGCGGTTGCAGTTCCGGTGGTGCTGGCGGCGGCGACGGCGGTGCTGGCGGTGGGAGTCGTTTTGTGATTGTTCTGCAACTACGACGATCACAATTCGAAGACAAGAAGGAGAACAGCATCATCATCATCATCATCATCCACAATAGTTTCGATAATGGCGTATAGGAGGAGACAAGCAATCACGAGGGCTTCCACTTTCAAAGAAGAGATCCATCATCCTGCCGACGATGTTGATCATAATTCCATCTCTTCTTCCTCTTCTTCCTCTTCTTCTCTTGCCGTTCAGGCGATCCGAGCTTCTGCTGCTCATCGAGATTCTTCGAATTCCTCTGCCTTTTCCGGTTCCTCCTCCGTTTTCTCCCCTGGCCATATGCGATCCAAGGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTNCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAACTCTACAATGTTAAATTGATCGCTTTGAGTGTTTGTTTGATTGACTTGGATAATGATAAGAAATAAGAAATTCAGCGAAATCTCAGATTTGATTGTGCCTATTGTTTTCGTCTCCATCATTGCATTAGCTATTTCATATCAATATGATTTGTTTAGCATCGAATTCTTCCGAGGAAGTGATTCATTAATTGCCGTGACCTCCTCTGTTTTTGGCAAATGTTGCGATTTCTGACCTAATCGGAATTTAGGACGGCCTTTTCTTTTTTATTTGTTTAATTGCCTAACCTATCGGAAGAATGATGGCGTCTGTTGATGATTCATTGCCGTGTTCGAATTCTTCAGCAAGCTCTATTGTTTTTGTTGGTCATTCAAATATGCCTTTATAGCGGCCATGTAATCTGTATCTGATGCTATCCCTCTATTTCCAGAGTTTTGCTGGCGAGAATTTGACATTCAAAAGTGAGTCGAAATCCGGGTTTTGGGGCGTACTTGCTCGGAAAGCTAAGGCAATTCTCGAAGAAGATGACATAGCCATAGAAGAGGAAACTAGTGGTTTCCAGCCCATTAATACCTCAACCCTTAGCCAGGTGAGTATCATCTGTCTATACTTTATCAATTGCGAGGTGGAGAATTGAGCCATTACCGACAATGCCTTGTTCACTGAGCTATCTGGCATCACTACATTACATAAATATTGACACAATTTGTTGTGATAATGATTTATCTTAGGTATATGCAATCTTTTTAATTTGAAACACCCTTGTTTATGTATAAGTCACGTTATTCAATAGATGAGGAATTAGAGTAAATTCTGAAAATGTGATGTTGAATTTTCAAAAACACAACAGAAAAATCTCGTATGAGCACAGAGATTTTAACTTATATGCAATTCGTTTATCCCTACTGCTCTGTTTTCTGATTTTCATATGAATTGGTATCAGGAGCCATGTCAGTCTACTGATCACGACTCGAAGAAATCGGACAATCCAGCAAAACCGAAGCGTTTGGATGCAATCACAACTTCGTTTAATCAACTTGGGGACACAAATAAAAAGGCATCTGAGGTAAGAACAGAACTTGGTTTTATTGTTTTTTCATATCTTGGGGACACTAATTAGCTGTCCATTTCTCAGATTAATCGACCTTTTTGTACTTGAAAATATAGATTAATAGTATCTCTGCCTGATTTCAATTTGCAAGATGGTAAAATACATTGGAATATCTTGAGAACATCTCTCTCGATCATATATTTTCATGAAAATTATCACCTCACTTCGGAATTTTAAAAATTCAAGGCCTCCTACTCTAATATACTATGATAAATAAATCTTACAAAATCCAAAGACTTGACTGCACAATCGAGTCTGATTTAAAAGTTGGAAACTCTGTTGAGGATTATGAAAGGAGTAGTCCCACGTTGGCTAATTAAGAGGAAGGTCATAGGTGTATAAGGAACATTATCTTCGTTGGTATGAAACCTTTTGAGAAAACCAATAGCAAAACCAATAGAGCTTATGCTCAAAGTGGACAATATCGTACCATTATATAGGTTTGTGATTCCTAACAAACTCCATTCAAGAATATCTTCGGTATGGCTTCTTAGTGAATGGATATTCGAAATTAGATTTGGTCATACCATTTTCAACACCTCGTCTTGGTTTGCAGGAAGGTCACCCAATTGTGGGAGCTAAGACTACAGACATCATTCATGAAAATCGCAAACTGCAGATTAGGAGAAAGGGCAACAAATCTGAAGGATTATTTCCTACTGTGAATAATCCATGGCAGCAACCAAATCTACTGTCTCCAGAACCACGGATGCAAGCACATCATGAAACTCAACTGAAGGCATCTCGAGACGTAAGGTGCCAACTTTGTAATTATGTATCGTAATGCAACTCATTGAATTTTTCTCTTACTCAAATTAAAGTCAAAATGATTGGAGTTGGATTCATCGTCTTAGCTAAGTTTAATCTGACAAAGTAAGTTGAAACTGTTTCCTAAGCTTGAGATTTCCAATGTGAATGTCATCAATTGAATTTAGATGGTTAATTTTACTCGTACTTGCTCGAACATTAGTAAAAAATACCTTTGGTGATGAGTGCATCAATGGCATAACAATGTCAAAATTACCTGTGGAATGTAGGTGGCGATGGCTACAGCTGCCAAAGCCAAACTATTACTCCGGGAGCTGAAAACCATTAAAGCAGAACTGGCTTTTGCTAAAGAAAGATGTGCACAATTAGAGGAAGAAAACAAAATTCTCAGGGAAAATCGAGAGAAGGGAGACAATCGTGCAGATGATGACTTGGTAATGTATTCACTAGAACATCATTTCAAAAACATGGTTTGTATGTTCTAACGTTCATTTGGATCATGAAAGGATTTTTGAACTGTTTCTAAATCCAGATTCGGCTTCAACTTGAGACTCTTTTGGCTGAGAAGGCTCGTTTGGCGCACGAGAATTCGATATATGCACGCGAGAACCGATTCCTAAGGGAAATTGTGGAGTACCACCAACTGACAATGCAGGATGTGGTTTACCTAGACGAAGGAATGGAAGAAGTGACAGAATATTATCCAAGATCCACCTCTCCAGAGATCACCAGAATGCTTTTTAATTATGGTTCCCCACATTCCTCAACTTCTCCAACCTCACCTTCAGCAGCAGCCATGGAAGATCTTCCTGTTCCTCGTGTTCATCCAAAAGAAGGGAAGGACGATGATGATGACGACGACGACGACGATGATGATAAAGAAGACAGTGAGGGAGACCCATCTCCCACTACAGTTTCTGAGGAAGAAGAAGGTACAGAAAACTCCCCATTGCCTTCAACAAGTACTTCTTCCTAAGGATTTTGCTTACCGTTCTTTCAACTAATAATCTGTGAAAAGCAAAAAANTTATTCTTTTTTGTTGTTGAAGAAATCATACAAGAATTGCAGGTGGGGGCAAGCAAGAAGGCAGAGTTTGATGTGGTTTGATTCTTGTTTTTTTTCCATTTATTGACCATTTTTTTGCTACTGAAATTAACAAAAGTGAGAATTGTAGAGTATAATGCCAATGCCAGGTGATAAATGTTGCAAAATAATACACTATCAATTCATTCTTTTTTCTTGAGCATGGAATTACATGTTCATCAATATTTTTATTTGTTCTTATCATATCTTTTGATGGGTAATTGCATAATTGAGAGATTTCTATGGAGTATTTAACAAAAAAAAAATTATATATATATTTCAGAGCTATCGTCCCACTAACAAATATTCTTGTCATAGGGTCCGTTCCAAATAAATATAGTGAAATCACCTTTTCTATTCTTTTCCCGGACTCGTAACTAAGAAAGATGTTTACTCTTTAAAATATTTCATGGACCCGTAACTAAAAAAGATGTTCACTCGGGAACAAGGGAAGGGGTAGATTTATCCCGTCATATCCCATAACGTAGGCGGGAACCGGGGAAGGGGTAGACGTCACGTAGGCGGGAACAGGGGAAGGGGTAGATTTATCCCGTCATATCCCATAACGTAGGCAGGAACAAGGGAAGGGGTCCCGTCATATCCCATAACGTAGGCGGGAACAAGGGAAGGGGTAGATTTATCCCGACGGGAGTAAGAGTAATAATAAATATAAGACTATATTAAATTGTATGCATGCTTCGTTCCAATGGAAATATAAATGTTATAAATTAACATTGTAATTAACACATTTACTTATTTTTCAAATATGGATTGAATAAAATTAAGGGAAAAATCAATTTATACCTCTTGAAATTATTAAATCAATTAAAACTTCAAATTATTACATAATTAAAGCTGAAAATTACCTGTATCTATTTGGTTATTTTAGAGTTTTAATTATGAAAGTTTTAAATGATAAATTAACAAATTATAAAGAAATTATATAATTGTACAATTTTAATTATTTTAATTAATTTAAAGACAAATCAATAATCAAACTGGGTATTATATGTAACAATTTCTCATTTTATGCATTTGGACTAATTTATAAATCAACACAACAACTGACTTTGGTACTAAATTTACACTCCAGACTCAGCAATTCATTAATTTTGCATATGTGGTTAAACCCGTCCTCCTCCGTAACACAAAAGGGACACTATTACGTATACATTCCGATACCGAATTGGCGTTTCCGAGCACATTCTTCTTGTGAGCGCAGTCTTTGCTACACAAAATGTACATCTAACTACACAGGCCATTAGTTAGATGTACATTTTGTGTAGGTAAAGATGTGATGAACCACAGAGCCTCTGATGGGGCTGCTGGAAGTAAATGGCTTAGAAAACCTGGAAAAACAGACTGGTTGATCCATCACCAAATGACCTCAGATCTGCAGGTTTAA ATGGAAAACGAAAGAAGTTAGTTAGAGAAGAGAGAAAGAAGAACAAAGCTGCCAATTCTCTCGGCATTCGATTCATTTTCGAGGCGGAAGCGGTTGCAGTTCCGGTGGTGCTGGCGGCGGCGACGGCGGTGCTGGCGGTGGGAGTCGTTTTGTGATTGTTCTGCAACTACGACGATCACAATTCGAAGACAAGAAGGAGAACAGCATCATCATCATCATCATCATCCACAATAGTTTCGATAATGGCGTATAGGAGGAGACAAGCAATCACGAGGGCTTCCACTTTCAAAGAAGAGATCCATCATCCTGCCGACGATGTTGATCATAATTCCATCTCTTCTTCCTCTTCTTCCTCTTCTTCTCTTGCCGTTCAGGCGATCCGAGCTTCTGCTGCTCATCGAGATTCTTCGAATTCCTCTGCCTTTTCCGGTTCCTCCTCCGTTTTCTCCCCTGGCCATATGCGATCCAAGAGTTTTGCTGGCGAGAATTTGACATTCAAAAGTGAGTCGAAATCCGGGTTTTGGGGCGTACTTGCTCGGAAAGCTAAGGCAATTCTCGAAGAAGATGACATAGCCATAGAAGAGGAAACTAGTGGTTTCCAGCCCATTAATACCTCAACCCTTAGCCAGGAGCCATGTCAGTCTACTGATCACGACTCGAAGAAATCGGACAATCCAGCAAAACCGAAGCGTTTGGATGCAATCACAACTTCGTTTAATCAACTTGGGGACACAAATAAAAAGGCATCTGAGGAAGGTCACCCAATTGTGGGAGCTAAGACTACAGACATCATTCATGAAAATCGCAAACTGCAGATTAGGAGAAAGGGCAACAAATCTGAAGGATTATTTCCTACTGTGAATAATCCATGGCAGCAACCAAATCTACTGTCTCCAGAACCACGGATGCAAGCACATCATGAAACTCAACTGAAGGCATCTCGAGACGTGGCGATGGCTACAGCTGCCAAAGCCAAACTATTACTCCGGGAGCTGAAAACCATTAAAGCAGAACTGGCTTTTGCTAAAGAAAGATGTGCACAATTAGAGGAAGAAAACAAAATTCTCAGGGAAAATCGAGAGAAGGGAGACAATCGTGCAGATGATGACTTGATTCGGCTTCAACTTGAGACTCTTTTGGCTGAGAAGGCTCGTTTGGCGCACGAGAATTCGATATATGCACGCGAGAACCGATTCCTAAGGGAAATTGTGGAGTACCACCAACTGACAATGCAGGATGTGGTTTACCTAGACGAAGGAATGGAAGAAGTGACAGAATATTATCCAAGATCCACCTCTCCAGAGATCACCAGAATGCTTTTTAATTATGGTAAAGATGTGATGAACCACAGAGCCTCTGATGGGGCTGCTGGAAGTAAATGGCTTAGAAAACCTGGAAAAACAGACTGGTTGATCCATCACCAAATGACCTCAGATCTGCAGGTTTAA ATGGCGTATAGGAGGAGACAAGCAATCACGAGGGCTTCCACTTTCAAAGAAGAGATCCATCATCCTGCCGACGATGTTGATCATAATTCCATCTCTTCTTCCTCTTCTTCCTCTTCTTCTCTTGCCGTTCAGGCGATCCGAGCTTCTGCTGCTCATCGAGATTCTTCGAATTCCTCTGCCTTTTCCGGTTCCTCCTCCGTTTTCTCCCCTGGCCATATGCGATCCAAGAGTTTTGCTGGCGAGAATTTGACATTCAAAAGTGAGTCGAAATCCGGGTTTTGGGGCGTACTTGCTCGGAAAGCTAAGGCAATTCTCGAAGAAGATGACATAGCCATAGAAGAGGAAACTAGTGGTTTCCAGCCCATTAATACCTCAACCCTTAGCCAGGAGCCATGTCAGTCTACTGATCACGACTCGAAGAAATCGGACAATCCAGCAAAACCGAAGCGTTTGGATGCAATCACAACTTCGTTTAATCAACTTGGGGACACAAATAAAAAGGCATCTGAGGAAGGTCACCCAATTGTGGGAGCTAAGACTACAGACATCATTCATGAAAATCGCAAACTGCAGATTAGGAGAAAGGGCAACAAATCTGAAGGATTATTTCCTACTGTGAATAATCCATGGCAGCAACCAAATCTACTGTCTCCAGAACCACGGATGCAAGCACATCATGAAACTCAACTGAAGGCATCTCGAGACGTGGCGATGGCTACAGCTGCCAAAGCCAAACTATTACTCCGGGAGCTGAAAACCATTAAAGCAGAACTGGCTTTTGCTAAAGAAAGATGTGCACAATTAGAGGAAGAAAACAAAATTCTCAGGGAAAATCGAGAGAAGGGAGACAATCGTGCAGATGATGACTTGATTCGGCTTCAACTTGAGACTCTTTTGGCTGAGAAGGCTCGTTTGGCGCACGAGAATTCGATATATGCACGCGAGAACCGATTCCTAAGGGAAATTGTGGAGTACCACCAACTGACAATGCAGGATGTGGTTTACCTAGACGAAGGAATGGAAGAAGTGACAGAATATTATCCAAGATCCACCTCTCCAGAGATCACCAGAATGCTTTTTAATTATGGTAAAGATGTGATGAACCACAGAGCCTCTGATGGGGCTGCTGGAAGTAAATGGCTTAGAAAACCTGGAAAAACAGACTGGTTGATCCATCACCAAATGACCTCAGATCTGCAGGTTTAA MAYRRRQAITRASTFKEEIHHPADDVDHNSISSSSSSSSSLAVQAIRASAAHRDSSNSSAFSGSSSVFSPGHMRSKSFAGENLTFKSESKSGFWGVLARKAKAILEEDDIAIEEETSGFQPINTSTLSQEPCQSTDHDSKKSDNPAKPKRLDAITTSFNQLGDTNKKASEEGHPIVGAKTTDIIHENRKLQIRRKGNKSEGLFPTVNNPWQQPNLLSPEPRMQAHHETQLKASRDVAMATAAKAKLLLRELKTIKAELAFAKERCAQLEEENKILRENREKGDNRADDDLIRLQLETLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDVVYLDEGMEEVTEYYPRSTSPEITRMLFNYGKDVMNHRASDGAAGSKWLRKPGKTDWLIHHQMTSDLQV Homology
BLAST of Cp4.1LG10g07280 vs. NCBI nr
Match: XP_023544827.1 (uncharacterized protein LOC111804305 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 689 bits (1777), Expect = 1.83e-247 Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0
BLAST of Cp4.1LG10g07280 vs. NCBI nr
Match: KAG7033696.1 (hypothetical protein SDJN02_03421, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 672 bits (1733), Expect = 9.51e-241 Identity = 355/363 (97.80%), Postives = 358/363 (98.62%), Query Frame = 0
BLAST of Cp4.1LG10g07280 vs. NCBI nr
Match: XP_022950505.1 (uncharacterized protein LOC111453596 [Cucurbita moschata]) HSP 1 Score: 667 bits (1721), Expect = 4.58e-239 Identity = 354/363 (97.52%), Postives = 356/363 (98.07%), Query Frame = 0
BLAST of Cp4.1LG10g07280 vs. NCBI nr
Match: XP_022978186.1 (uncharacterized protein LOC111478244 [Cucurbita maxima]) HSP 1 Score: 662 bits (1708), Expect = 4.88e-237 Identity = 352/363 (96.97%), Postives = 355/363 (97.80%), Query Frame = 0
BLAST of Cp4.1LG10g07280 vs. NCBI nr
Match: KAG6603516.1 (hypothetical protein SDJN03_04125, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 605 bits (1560), Expect = 7.34e-215 Identity = 318/325 (97.85%), Postives = 321/325 (98.77%), Query Frame = 0
BLAST of Cp4.1LG10g07280 vs. ExPASy TrEMBL
Match: A0A6J1GFX8 (uncharacterized protein LOC111453596 OS=Cucurbita moschata OX=3662 GN=LOC111453596 PE=4 SV=1) HSP 1 Score: 667 bits (1721), Expect = 2.22e-239 Identity = 354/363 (97.52%), Postives = 356/363 (98.07%), Query Frame = 0
BLAST of Cp4.1LG10g07280 vs. ExPASy TrEMBL
Match: A0A6J1IM16 (uncharacterized protein LOC111478244 OS=Cucurbita maxima OX=3661 GN=LOC111478244 PE=4 SV=1) HSP 1 Score: 662 bits (1708), Expect = 2.36e-237 Identity = 352/363 (96.97%), Postives = 355/363 (97.80%), Query Frame = 0
BLAST of Cp4.1LG10g07280 vs. ExPASy TrEMBL
Match: A0A5D3C4F3 (Actin cytoskeleton-regulatory complex protein pan1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00700 PE=4 SV=1) HSP 1 Score: 567 bits (1462), Expect = 6.38e-200 Identity = 309/361 (85.60%), Postives = 326/361 (90.30%), Query Frame = 0
BLAST of Cp4.1LG10g07280 vs. ExPASy TrEMBL
Match: A0A1S3CJA7 (uncharacterized protein LOC103501490 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501490 PE=4 SV=1) HSP 1 Score: 567 bits (1462), Expect = 6.38e-200 Identity = 309/361 (85.60%), Postives = 326/361 (90.30%), Query Frame = 0
BLAST of Cp4.1LG10g07280 vs. ExPASy TrEMBL
Match: A0A0A0KXX4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337320 PE=4 SV=1) HSP 1 Score: 567 bits (1461), Expect = 9.38e-200 Identity = 307/361 (85.04%), Postives = 328/361 (90.86%), Query Frame = 0
BLAST of Cp4.1LG10g07280 vs. TAIR 10
Match: AT1G30050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 246 Blast hits to 244 proteins in 61 species: Archae - 0; Bacteria - 8; Metazoa - 78; Fungi - 10; Plants - 117; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). ) HSP 1 Score: 282.0 bits (720), Expect = 7.7e-76 Identity = 202/378 (53.44%), Postives = 233/378 (61.64%), Query Frame = 0
BLAST of Cp4.1LG10g07280 vs. TAIR 10
Match: AT5G01970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30050.1); Has 240 Blast hits to 236 proteins in 72 species: Archae - 0; Bacteria - 15; Metazoa - 51; Fungi - 19; Plants - 119; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). ) HSP 1 Score: 276.2 bits (705), Expect = 4.2e-74 Identity = 190/356 (53.37%), Postives = 232/356 (65.17%), Query Frame = 0
BLAST of Cp4.1LG10g07280 vs. TAIR 10
Match: AT2G30530.1 (unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 5513 Blast hits to 872 proteins in 154 species: Archae - 0; Bacteria - 30; Metazoa - 615; Fungi - 144; Plants - 149; Viruses - 12; Other Eukaryotes - 4563 (source: NCBI BLink). ) HSP 1 Score: 264.6 bits (675), Expect = 1.3e-70 Identity = 180/345 (52.17%), Postives = 221/345 (64.06%), Query Frame = 0
BLAST of Cp4.1LG10g07280 vs. TAIR 10
Match: AT4G02800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 3209 Blast hits to 2720 proteins in 308 species: Archae - 13; Bacteria - 213; Metazoa - 1207; Fungi - 247; Plants - 183; Viruses - 21; Other Eukaryotes - 1325 (source: NCBI BLink). ) HSP 1 Score: 115.9 bits (289), Expect = 7.3e-26 Identity = 86/234 (36.75%), Postives = 136/234 (58.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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