Cp4.1LG10g07250 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG10g07250
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionLEA_2 domain-containing protein
LocationCp4.1LG10: 5917692 .. 5918348 (-)
RNA-Seq ExpressionCp4.1LG10g07250
SyntenyCp4.1LG10g07250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTCGCCTCCTCCTCCACCTCTACCTTAATCAAGGATTTCAAATCCACTAAATCCGTCGTCGACGAAACCGCACGCTCCCGGAGTCACAGCAACCTCTGCATCGGAGTCTCCGTCGCCGTCGCCGTCGTCCTCTTCCTCGTCGTTATAATCGTCATTTTAGCCTTCACGGTGTTCAAGCCAAAGCGACCTATCACCACCATCAATTCCGTCTCCATTGACGATTTCGACCTGTCGCTGAGCGTAGTCAGAACCTCTGTCGATTTCAACATCACTCTGGTTGCCGATGTCGCTATTACGAACCCTAACAAGGTCGGATTTAGCTACTCGAATAGCACCGCGTTTTTCAATTACAGAGGCGAACTGGTTGGCGAGGTGCCGATTCTGGCCGCGCAAATCGATGCAGGTCAGACCACGCAGATGAACATTACGTTGAGGATTTTGGCAGATCGGTTTGTGAAAACGTCGACGGTGTTCTTCGATGTCGTAGCCGGATCGATGCCGTTGAATGCGTACGCGAGAGTTTCAGGTAAGGTGAGGATTTTGGGGATTTTCAATATTCATATGGTTTCTACAACATCGTGTGATTTCAGTATTAACATATCGGAGAGGAATATTAAAGATCAACAGTGTAATTACCATACTAAGATCTAA

mRNA sequence

ATGGAAGTCGCCTCCTCCTCCACCTCTACCTTAATCAAGGATTTCAAATCCACTAAATCCGTCGTCGACGAAACCGCACGCTCCCGGAGTCACAGCAACCTCTGCATCGGAGTCTCCGTCGCCGTCGCCGTCGTCCTCTTCCTCGTCGTTATAATCGTCATTTTAGCCTTCACGGTGTTCAAGCCAAAGCGACCTATCACCACCATCAATTCCGTCTCCATTGACGATTTCGACCTGTCGCTGAGCGTAGTCAGAACCTCTGTCGATTTCAACATCACTCTGGTTGCCGATGTCGCTATTACGAACCCTAACAAGGTCGGATTTAGCTACTCGAATAGCACCGCGTTTTTCAATTACAGAGGCGAACTGGTTGGCGAGGTGCCGATTCTGGCCGCGCAAATCGATGCAGGTCAGACCACGCAGATGAACATTACGTTGAGGATTTTGGCAGATCGGTTTGTGAAAACGTCGACGGTGTTCTTCGATGTCGTAGCCGGATCGATGCCGTTGAATGCGTACGCGAGAGTTTCAGGTAAGGTGAGGATTTTGGGGATTTTCAATATTCATATGGTTTCTACAACATCGTGTGATTTCAGTATTAACATATCGGAGAGGAATATTAAAGATCAACAGTGTAATTACCATACTAAGATCTAA

Coding sequence (CDS)

ATGGAAGTCGCCTCCTCCTCCACCTCTACCTTAATCAAGGATTTCAAATCCACTAAATCCGTCGTCGACGAAACCGCACGCTCCCGGAGTCACAGCAACCTCTGCATCGGAGTCTCCGTCGCCGTCGCCGTCGTCCTCTTCCTCGTCGTTATAATCGTCATTTTAGCCTTCACGGTGTTCAAGCCAAAGCGACCTATCACCACCATCAATTCCGTCTCCATTGACGATTTCGACCTGTCGCTGAGCGTAGTCAGAACCTCTGTCGATTTCAACATCACTCTGGTTGCCGATGTCGCTATTACGAACCCTAACAAGGTCGGATTTAGCTACTCGAATAGCACCGCGTTTTTCAATTACAGAGGCGAACTGGTTGGCGAGGTGCCGATTCTGGCCGCGCAAATCGATGCAGGTCAGACCACGCAGATGAACATTACGTTGAGGATTTTGGCAGATCGGTTTGTGAAAACGTCGACGGTGTTCTTCGATGTCGTAGCCGGATCGATGCCGTTGAATGCGTACGCGAGAGTTTCAGGTAAGGTGAGGATTTTGGGGATTTTCAATATTCATATGGTTTCTACAACATCGTGTGATTTCAGTATTAACATATCGGAGAGGAATATTAAAGATCAACAGTGTAATTACCATACTAAGATCTAA

Protein sequence

MEVASSSTSTLIKDFKSTKSVVDETARSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVFKPKRPITTINSVSIDDFDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKVRILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Homology
BLAST of Cp4.1LG10g07250 vs. NCBI nr
Match: XP_023544036.1 (uncharacterized protein LOC111803737 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404 bits (1039), Expect = 1.08e-141
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDFKSTKSVVDETARSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVF 60
           MEVASSSTSTLIKDFKSTKSVVDETARSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVF
Sbjct: 1   MEVASSSTSTLIKDFKSTKSVVDETARSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GELVGEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV
Sbjct: 121 GELVGEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218
           RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Sbjct: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

BLAST of Cp4.1LG10g07250 vs. NCBI nr
Match: XP_022950379.1 (uncharacterized protein LOC111453494 [Cucurbita moschata])

HSP 1 Score: 386 bits (992), Expect = 1.57e-134
Identity = 209/218 (95.87%), Postives = 212/218 (97.25%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDFKSTKSVVDETARSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVF 60
           MEVASSSTST IKD KSTKSVVDETARSRS  NLCIGVSVAVAVVL +VVIIVILAFTVF
Sbjct: 1   MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFD+SLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GELV EVPILAA+IDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV
Sbjct: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218
           RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Sbjct: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

BLAST of Cp4.1LG10g07250 vs. NCBI nr
Match: XP_022977374.1 (uncharacterized protein LOC111477726 [Cucurbita maxima])

HSP 1 Score: 380 bits (975), Expect = 6.13e-132
Identity = 205/218 (94.04%), Postives = 209/218 (95.87%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDFKSTKSVVDETARSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVF 60
           MEVASSSTSTLIKD KSTKSVVD TA SRS  NLCIGVSV VAVVL +VVIIVILAFTVF
Sbjct: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFD+SLSVVRTSVDFNITL+ADVAITNPNKVGFSYSNSTAFFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GELVGEVPILAAQIDAGQTTQMNI LRILADRFVKTSTVFFDVVAGSMPLNAYA+VSGKV
Sbjct: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218
            ILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Sbjct: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

BLAST of Cp4.1LG10g07250 vs. NCBI nr
Match: KAG6603510.1 (Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033691.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377 bits (969), Expect = 5.03e-131
Identity = 203/218 (93.12%), Postives = 209/218 (95.87%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDFKSTKSVVDETARSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVF 60
           MEVASSSTSTLIKD KSTKSVVDETARSRS   LCIGVSVAVAVVL +VVIIVILAFTVF
Sbjct: 1   MEVASSSTSTLIKDSKSTKSVVDETARSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFD+SLSV RTSVDFNITLVADVAITNPNKVGFSYSNST FFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GELV EVPILAA+IDAGQTTQMNITLRILADRFVKTSTVF+DVVAGSMPLNAYARVSGKV
Sbjct: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218
            ILGIFNIHMVSTTSCDFSIN+SERNIKDQ+CNYHTKI
Sbjct: 181 MILGIFNIHMVSTTSCDFSINVSERNIKDQRCNYHTKI 218

BLAST of Cp4.1LG10g07250 vs. NCBI nr
Match: XP_004142665.1 (uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical protein Csa_012636 [Cucumis sativus])

HSP 1 Score: 288 bits (738), Expect = 6.80e-96
Identity = 149/218 (68.35%), Postives = 182/218 (83.49%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDFKSTKSVVDETARSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVF 60
           ME+ASSS+S LIKD KST+S      RSR   N CIG+S+A+  +L L++II+ILAFTVF
Sbjct: 1   MEIASSSSS-LIKDPKSTQSTAAAATRSRKRRNTCIGISIAI--LLLLIIIIIILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           K KRPITT+NSV++ D D+SL++   SVD N+TL+AD+AITNPNKVGFSY NSTAF NYR
Sbjct: 61  KAKRPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GELVGE PI+A +IDAG+  +MNITL I+ADR +KT+TVF D VAGSMPLN Y R+SGKV
Sbjct: 121 GELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218
           +ILGIFNIH+VS+TSCDF+++ISER I DQQCNYHTKI
Sbjct: 181 KILGIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

BLAST of Cp4.1LG10g07250 vs. ExPASy TrEMBL
Match: A0A6J1GFM4 (uncharacterized protein LOC111453494 OS=Cucurbita moschata OX=3662 GN=LOC111453494 PE=4 SV=1)

HSP 1 Score: 386 bits (992), Expect = 7.61e-135
Identity = 209/218 (95.87%), Postives = 212/218 (97.25%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDFKSTKSVVDETARSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVF 60
           MEVASSSTST IKD KSTKSVVDETARSRS  NLCIGVSVAVAVVL +VVIIVILAFTVF
Sbjct: 1   MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFD+SLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GELV EVPILAA+IDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV
Sbjct: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218
           RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Sbjct: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

BLAST of Cp4.1LG10g07250 vs. ExPASy TrEMBL
Match: A0A6J1IR72 (uncharacterized protein LOC111477726 OS=Cucurbita maxima OX=3661 GN=LOC111477726 PE=4 SV=1)

HSP 1 Score: 380 bits (975), Expect = 2.97e-132
Identity = 205/218 (94.04%), Postives = 209/218 (95.87%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDFKSTKSVVDETARSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVF 60
           MEVASSSTSTLIKD KSTKSVVD TA SRS  NLCIGVSV VAVVL +VVIIVILAFTVF
Sbjct: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFD+SLSVVRTSVDFNITL+ADVAITNPNKVGFSYSNSTAFFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GELVGEVPILAAQIDAGQTTQMNI LRILADRFVKTSTVFFDVVAGSMPLNAYA+VSGKV
Sbjct: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218
            ILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Sbjct: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

BLAST of Cp4.1LG10g07250 vs. ExPASy TrEMBL
Match: A0A0A0L094 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 SV=1)

HSP 1 Score: 288 bits (738), Expect = 3.29e-96
Identity = 149/218 (68.35%), Postives = 182/218 (83.49%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDFKSTKSVVDETARSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVF 60
           ME+ASSS+S LIKD KST+S      RSR   N CIG+S+A+  +L L++II+ILAFTVF
Sbjct: 1   MEIASSSSS-LIKDPKSTQSTAAAATRSRKRRNTCIGISIAI--LLLLIIIIIILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           K KRPITT+NSV++ D D+SL++   SVD N+TL+AD+AITNPNKVGFSY NSTAF NYR
Sbjct: 61  KAKRPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GELVGE PI+A +IDAG+  +MNITL I+ADR +KT+TVF D VAGSMPLN Y R+SGKV
Sbjct: 121 GELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218
           +ILGIFNIH+VS+TSCDF+++ISER I DQQCNYHTKI
Sbjct: 181 KILGIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

BLAST of Cp4.1LG10g07250 vs. ExPASy TrEMBL
Match: A0A1S3CJB5 (uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=4 SV=1)

HSP 1 Score: 287 bits (735), Expect = 9.75e-96
Identity = 150/219 (68.49%), Postives = 185/219 (84.47%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDFKSTKSVVDETA-RSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTV 60
           ME+ASSS+S+ IKD KST+S     A RSR   N CIG+S+A+  +L L+++I+ILAFTV
Sbjct: 1   MEIASSSSSS-IKDPKSTQSAAAAAAARSRKRRNTCIGISIAI--LLLLIILIIILAFTV 60

Query: 61  FKPKRPITTINSVSIDDFDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNY 120
           FK KRPITT+NSV++ D D+SL++ R SVD N+TL+A +AITNPNKVGFSY NSTAF NY
Sbjct: 61  FKAKRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNY 120

Query: 121 RGELVGEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGK 180
           RGELVGE PI+A +IDAG+  +MNITL I+ADR +KT+TVF DVVAGSMPLN YAR+SGK
Sbjct: 121 RGELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGK 180

Query: 181 VRILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218
           V+ILGIFNIH+VSTTSCDF+++ISER + DQQCNYHTKI
Sbjct: 181 VKILGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

BLAST of Cp4.1LG10g07250 vs. ExPASy TrEMBL
Match: A0A6J1HS80 (uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106 PE=4 SV=1)

HSP 1 Score: 256 bits (655), Expect = 9.51e-84
Identity = 141/218 (64.68%), Postives = 172/218 (78.90%), Query Frame = 0

Query: 1   MEVASSSTSTLIKDFKSTKSVVDETARSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVF 60
           ME+ASS+T    KD KS         RSR   N CIGVS+A   VL L+V+IVILAFTVF
Sbjct: 1   MEIASSTT----KDPKS--------IRSRRRRNTCIGVSIAT--VLLLIVLIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           K KRPITTINSV++ D DLSL++ R++V  NITL+ DV+ITNPNKVGFSYSNSTA  NYR
Sbjct: 61  KAKRPITTINSVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GEL+GE PI + +I+A Q+ +MNIT+ I+ADR +++STV  DVVAGSMPLN Y R+SGKV
Sbjct: 121 GELIGEAPIPSGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSMPLNTYTRISGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218
           RILGIF I +VS+TSCDF+I+IS+R I DQQC+YHTKI
Sbjct: 181 RILGIFKIRVVSSTSCDFTIDISDRKIGDQQCSYHTKI 204

BLAST of Cp4.1LG10g07250 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-43
Identity = 89/202 (44.06%), Postives = 139/202 (68.81%), Query Frame = 0

Query: 18  TKSVVDETARS-RSHSNLCIGVSVAVAVVLFLVVIIVILAFTVFKPKRPITTINSVSIDD 77
           T+S    TA+  R   N  I +   + ++L + ++IVILAFT+FKPKRP TTI+SV++D 
Sbjct: 34  TQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTIDSVTVDR 93

Query: 78  FDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQIDA 137
              S++ +   V  N+TL  D+++ NPN++GFSY +S+A  NYRG+++GE P+ A +I A
Sbjct: 94  LQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAA 153

Query: 138 GQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKVRILGIFNIHMVSTTSC 197
            +T  +NITL ++ADR +  + +  DV+AG +PLN + +V+GKV +L IF I + S++SC
Sbjct: 154 RKTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSC 213

Query: 198 DFSINISERNIKDQQCNYHTKI 219
           D SI++S+RN+  Q C Y TK+
Sbjct: 214 DLSISVSDRNVTSQHCKYSTKL 235

BLAST of Cp4.1LG10g07250 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-21
Identity = 69/209 (33.01%), Postives = 115/209 (55.02%), Query Frame = 0

Query: 9   STLIKDFKSTKSVVDETARSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVFKPKRPITT 68
           +T++     + S +  T RSR+     I V+   A  L L  I++ L FTVF+ K PI  
Sbjct: 13  ATILPVSDESASNIKNTHRSRNRIKCSICVT---ATSLILTTIVLTLVFTVFRVKDPIIK 72

Query: 69  INSVSIDDFDLSLSVVRTS----VDFNITLVADVAITNPNKVGFSYSNSTAFFNYRGELV 128
           +N V ++  D   SV  T+    +  NI+++ DV++ NPN   F YSN+T    Y+G LV
Sbjct: 73  MNGVMVNGLD---SVTGTNQVQLLGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLV 132

Query: 129 GEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVV-AGSMPLNAYARVSGKVRIL 188
           GE   L  +    +T++MN+T+ I+ DR +    +  ++  +G + + +Y RV GKV+I+
Sbjct: 133 GEAHGLPGKARPHRTSRMNVTVDIMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIM 192

Query: 189 GIFNIHMVSTTSCDFSINISERNIKDQQC 213
           GI   H+    +C  ++NI+ + I+D  C
Sbjct: 193 GIVKKHVTVKMNCTMAVNITGQAIQDVDC 215

BLAST of Cp4.1LG10g07250 vs. TAIR 10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 79.3 bits (194), Expect = 4.1e-15
Identity = 54/190 (28.42%), Postives = 94/190 (49.47%), Query Frame = 0

Query: 30  SHSNLCIGVSVAVAVVLFLVVIIVILAFTVFKPKRPITTINSVSIDDFDLSLSVVRTSVD 89
           S   +C  VS  +  VLF++ +  ++   VFKPK PI    S ++D    ++S +   V 
Sbjct: 2   SKRRICCIVS-GIIFVLFVIFMTALILAQVFKPKHPILQTVSSTVDGISTNIS-LPYEVQ 61

Query: 90  FNITLVADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQIDAGQTTQMNITLRIL 149
            N TL  ++ + NPN   F Y        YR  LVG + + ++ + A  +  +   L + 
Sbjct: 62  LNFTLTLEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCPLFLQ 121

Query: 150 ADRFV-KTSTVFFDVVAGSMPLNAYARVSGKVRILGIFNIHMVSTTSCDFSINISERNIK 209
            D+FV     +  DV+ G + +   A++ GK+ +LGIF I + S + C+  +      ++
Sbjct: 122 LDKFVANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVE 181

Query: 210 DQQCNYHTKI 219
           DQ C+  TK+
Sbjct: 182 DQVCDLKTKL 189

BLAST of Cp4.1LG10g07250 vs. TAIR 10
Match: AT4G23930.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 68.9 bits (167), Expect = 5.6e-12
Identity = 51/193 (26.42%), Postives = 98/193 (50.78%), Query Frame = 0

Query: 28  SRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVFKPKRPITTINSVSIDDFDLSLSVVRTS 87
           S+S SNL    +VA   ++FL++  + +  TVF+P+ P  ++ SV +  F    SV  +S
Sbjct: 2   SKSCSNLA-SCAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSF----SVANSS 61

Query: 88  VDFNITLVADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQIDAGQTTQMNITLR 147
           V F  +  +  A+ NPN+  FS+ N+     Y G  +G   + A +I++G+T +M  T  
Sbjct: 62  VSFTFSQFS--AVRNPNRAAFSHYNNVIQLFYYGNRIGYTFVPAGEIESGRTKRMLATFS 121

Query: 148 ILADRFVKTSTVFF--------DVVAGSMPLNAYARVSGKVRILGIFNIHMVSTTSCDFS 207
           + +      S+           D    ++ + +   ++G+VR+LG+F   + +  +C  +
Sbjct: 122 VQSFPLAAASSSQISAAQFQNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNCRIA 181

Query: 208 INISERNIKDQQC 213
           I+ S+ +I   +C
Sbjct: 182 ISSSDGSIVAVRC 187

BLAST of Cp4.1LG10g07250 vs. TAIR 10
Match: AT1G64450.1 (Glycine-rich protein family )

HSP 1 Score: 58.5 bits (140), Expect = 7.6e-09
Identity = 41/122 (33.61%), Postives = 67/122 (54.92%), Query Frame = 0

Query: 27  RSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVFKPKRPITTINSVSIDDFDLSLSVVRT 86
           RS   +NL    +VA   +L L+V+++++ FTVFKPK P  ++N+V +  F +S +    
Sbjct: 9   RSSGRTNLA-SCAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSFAVSNNTA-- 68

Query: 87  SVDFNITLVADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQIDAGQTTQMNITL 146
               N +    VA+ NPN+  FS+ +S+    Y G  VG + I A +ID+G+   M  T 
Sbjct: 69  ----NFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQYMAATF 123

Query: 147 RI 149
            +
Sbjct: 129 TV 123

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023544036.11.08e-141100.00uncharacterized protein LOC111803737 [Cucurbita pepo subsp. pepo][more]
XP_022950379.11.57e-13495.87uncharacterized protein LOC111453494 [Cucurbita moschata][more]
XP_022977374.16.13e-13294.04uncharacterized protein LOC111477726 [Cucurbita maxima][more]
KAG6603510.15.03e-13193.12Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. soro... [more]
XP_004142665.16.80e-9668.35uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
A0A6J1GFM47.61e-13595.87uncharacterized protein LOC111453494 OS=Cucurbita moschata OX=3662 GN=LOC1114534... [more]
A0A6J1IR722.97e-13294.04uncharacterized protein LOC111477726 OS=Cucurbita maxima OX=3661 GN=LOC111477726... [more]
A0A0A0L0943.29e-9668.35LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 ... [more]
A0A1S3CJB59.75e-9668.49uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=... [more]
A0A6J1HS809.51e-8464.68uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106... [more]
Match NameE-valueIdentityDescription
AT3G54200.12.1e-4344.06Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G46150.11.7e-2133.01Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT3G05975.14.1e-1528.42Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT4G23930.15.6e-1226.42Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G64450.17.6e-0933.61Glycine-rich protein family [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 98..185
e-value: 4.8E-9
score: 36.7
NoneNo IPR availableGENE3D2.60.40.1820coord: 51..200
e-value: 1.2E-9
score: 40.1
NoneNo IPR availablePANTHERPTHR31852:SF122LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 27..217
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 27..217
NoneNo IPR availableSUPERFAMILY117070LEA14-likecoord: 46..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g07250.1Cp4.1LG10g07250.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane