Cp4.1LG10g07010 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g07010
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	B3 domain-containing protein At2g31420-like
Location	Cp4.1LG10: 6056011 .. 6056832 (-)
RNA-Seq Expression	Cp4.1LG10g07010
Synteny	Cp4.1LG10g07010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTCGTCTTCATCTCCGCCGGCGAAAACATGAATTCACTCAGTCCAAATCTCACCAGCGACGGCGTTCAAGATCAAGATCGAGAAAGCGTCGAGGACGACGAACATCTTTCACTAATTAAGCGAAAGAGGAGTCCAAACAAACGAACTCCAAAGCGGCTCAAACTTTTAAAAGAAAGATCTCTTAAGCGCCCAATCGTCCAATCGATCGCTTCTCCAGTCCTCGAAGCATCAGCGGAACAACCGGACATCATATTCGACGCTGAAACCGAAAGTGAGAGCGATGTGAATGACGATCTAGATGATTTATTGATCGGTTGTAAGCAGGATGTACACGAATTTGATAGGATATTAGTGGACGGTTTACCGCAGGATTACAAGAGTTTGATGATTTTCATGGGAGCGTCGTCGAATTCGAGCCCTAATTTTTTGCTGCAGAAGCGATTGAAGAAAGGAGATGTGGACGAACGGCGAAATCGGCTTGTGATTCCGCAGAGGAAGATGAGAAATAATTTTCTGGATCTGGAGGAGGAGGAGAAGTTGAACATGGAGAGATGGTGGATGGTGGAGGTCATCGAGCCGGATTGTTCTGTGAGTTTGATAACGCTGAGTAAATGGGAGACGCCGAGTGGGGCGGCGTATGTGTTCATCACGGAGTGGAATGGACTGGTGGAGAGAAATGAGTTGAAGGAAGGAGACTTGGTTCAGCTATGGAGTTTTCGAGTTCACGTCGGCGAAGGCGGCGACGGCGACCATGGGAGGCTCTGCTTCATGCTTTTAGAGATATGTGAAGAAGGAGATGATGAAACTGATTCTTGA

mRNA sequence

ATGGGTCTCGTCTTCATCTCCGCCGGCGAAAACATGAATTCACTCAGTCCAAATCTCACCAGCGACGGCGTTCAAGATCAAGATCGAGAAAGCGTCGAGGACGACGAACATCTTTCACTAATTAAGCGAAAGAGGAGTCCAAACAAACGAACTCCAAAGCGGCTCAAACTTTTAAAAGAAAGATCTCTTAAGCGCCCAATCGTCCAATCGATCGCTTCTCCAGTCCTCGAAGCATCAGCGGAACAACCGGACATCATATTCGACGCTGAAACCGAAAGTGAGAGCGATGTGAATGACGATCTAGATGATTTATTGATCGGTTGTAAGCAGGATGTACACGAATTTGATAGGATATTAGTGGACGGTTTACCGCAGGATTACAAGAGTTTGATGATTTTCATGGGAGCGTCGTCGAATTCGAGCCCTAATTTTTTGCTGCAGAAGCGATTGAAGAAAGGAGATGTGGACGAACGGCGAAATCGGCTTGTGATTCCGCAGAGGAAGATGAGAAATAATTTTCTGGATCTGGAGGAGGAGGAGAAGTTGAACATGGAGAGATGGTGGATGGTGGAGGTCATCGAGCCGGATTGTTCTGTGAGTTTGATAACGCTGAGTAAATGGGAGACGCCGAGTGGGGCGGCGTATGTGTTCATCACGGAGTGGAATGGACTGGTGGAGAGAAATGAGTTGAAGGAAGGAGACTTGGTTCAGCTATGGAGTTTTCGAGTTCACGTCGGCGAAGGCGGCGACGGCGACCATGGGAGGCTCTGCTTCATGCTTTTAGAGATATGTGAAGAAGGAGATGATGAAACTGATTCTTGA

Coding sequence (CDS)

ATGGGTCTCGTCTTCATCTCCGCCGGCGAAAACATGAATTCACTCAGTCCAAATCTCACCAGCGACGGCGTTCAAGATCAAGATCGAGAAAGCGTCGAGGACGACGAACATCTTTCACTAATTAAGCGAAAGAGGAGTCCAAACAAACGAACTCCAAAGCGGCTCAAACTTTTAAAAGAAAGATCTCTTAAGCGCCCAATCGTCCAATCGATCGCTTCTCCAGTCCTCGAAGCATCAGCGGAACAACCGGACATCATATTCGACGCTGAAACCGAAAGTGAGAGCGATGTGAATGACGATCTAGATGATTTATTGATCGGTTGTAAGCAGGATGTACACGAATTTGATAGGATATTAGTGGACGGTTTACCGCAGGATTACAAGAGTTTGATGATTTTCATGGGAGCGTCGTCGAATTCGAGCCCTAATTTTTTGCTGCAGAAGCGATTGAAGAAAGGAGATGTGGACGAACGGCGAAATCGGCTTGTGATTCCGCAGAGGAAGATGAGAAATAATTTTCTGGATCTGGAGGAGGAGGAGAAGTTGAACATGGAGAGATGGTGGATGGTGGAGGTCATCGAGCCGGATTGTTCTGTGAGTTTGATAACGCTGAGTAAATGGGAGACGCCGAGTGGGGCGGCGTATGTGTTCATCACGGAGTGGAATGGACTGGTGGAGAGAAATGAGTTGAAGGAAGGAGACTTGGTTCAGCTATGGAGTTTTCGAGTTCACGTCGGCGAAGGCGGCGACGGCGACCATGGGAGGCTCTGCTTCATGCTTTTAGAGATATGTGAAGAAGGAGATGATGAAACTGATTCTTGA

Protein sequence

MGLVFISAGENMNSLSPNLTSDGVQDQDRESVEDDEHLSLIKRKRSPNKRTPKRLKLLKERSLKRPIVQSIASPVLEASAEQPDIIFDAETESESDVNDDLDDLLIGCKQDVHEFDRILVDGLPQDYKSLMIFMGASSNSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEEKLNMERWWMVEVIEPDCSVSLITLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWSFRVHVGEGGDGDHGRLCFMLLEICEEGDDETDS

Homology

[Close]

BLAST of Cp4.1LG10g07010 vs. ExPASy Swiss-Prot
Match: Q5RM09 (B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05920 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.7e-08
Identity = 46/133 (34.59%), Postives = 69/133 (51.88%), Query Frame = 0


Query: 124 PQDYKSLMIFMGASSNS-SPNFLLQKRLKKGDVDERRNRLVIP-QRKMRNNFLDLEE--- 183
           PQ+ + L+  M   + +  P  +++K L   DVD R+NRL IP    ++N+FL L+E   
Sbjct: 161 PQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNRLSIPINTVIQNDFLTLDESRL 220

Query: 184 --EEKLNMERWWMVEVIEPDCSVSL--ITLSKW--ETPSGAAY---VFITEWNGLVERNE 243
             E+++  E    V     D       +   +W   T SG++Y   V   EW+ +VE N 
Sbjct: 221 IDEDEITNEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDSGSSYWSFVLRGEWSNVVETNG 280

[Close]

BLAST of Cp4.1LG10g07010 vs. ExPASy Swiss-Prot
Match: Q9LSF7 (B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25182 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.1e-05
Identity = 35/114 (30.70%), Postives = 56/114 (49.12%), Query Frame = 0


Query: 145 LLQKRLKKGDVDERRNRLVIP-QRKMRNNFL----------DLEEEEKLNMERWWMVEVI 204
           + +K L   DV+  +NRL +P    +RN+FL          D++ ++K+ +       ++
Sbjct: 216 IFEKTLFVTDVNPTQNRLSMPFNNLLRNDFLTSVESRIIDKDIKNDKKIGVG----AILV 275

Query: 205 EPDCSVSLITLSKWETPSGAA-----YVFITEWNGLVERNELKEGDLVQLWSFR 243
           +  C    + L +WE    +      Y  I  WN +VE N LKEGD + LWSFR
Sbjct: 276 DQRCKKWGVMLKRWEMKKESGKGSWNYNLICGWNDIVEANGLKEGDNISLWSFR 325

[Close]

BLAST of Cp4.1LG10g07010 vs. ExPASy Swiss-Prot
Match: Q9FLV7 (B3 domain-containing protein At5g24050 OS=Arabidopsis thaliana OX=3702 GN=At5g24050 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.1e-05
Identity = 39/110 (35.45%), Postives = 53/110 (48.18%), Query Frame = 0


Query: 145 LLQKRLKKGDVDERRNRLVIP-QRKMRNNFLDLEE----EEKLNMERWWMVEVIEPD--C 204
           + +K L   DV+  +NRL +P    +RN+FL   E     E +N      V  I  D  C
Sbjct: 219 IFEKTLFVTDVNPTKNRLSMPFNNLLRNDFLTSVESIIINEDINNNNKIGVGAILVDQRC 278

Query: 205 SVSLITLSKWETPSGA-----AYVFITEWNGLVERNELKEGDLVQLWSFR 243
               + L +WE    +     +Y  I  WN +VE N LKEGD + LWSFR
Sbjct: 279 KKWGVMLKRWEMKKESGKGSWSYNLICGWNDIVEANRLKEGDNITLWSFR 328

[Close]

BLAST of Cp4.1LG10g07010 vs. ExPASy Swiss-Prot
Match: Q9LRX6 (Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 GN=At3g24850 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.4e-04
Identity = 38/128 (29.69%), Postives = 60/128 (46.88%), Query Frame = 0


Query: 145 LLQKRLKKGDVDERRNRLVIP-QRKMRNNFLDLEE-----EEKLNMERWWMVEVIEPDCS 204
           + +K L   D++  +NRL +P    ++N+FL   E     E+  N ++  +  ++    S
Sbjct: 229 IFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKEDINNNKKIGVGAILVDQRS 288

Query: 205 VSL-ITLSKWETPSGAA-----YVFITEWNGLVERNELKEGDLVQLWSFRVHVGEGGDGD 261
           V   + L +WE    +      Y  I  WN +VE N LKEGD + +WSFR          
Sbjct: 289 VKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRC--------- 347

[Close]

BLAST of Cp4.1LG10g07010 vs. NCBI nr
Match: XP_023544949.1 (B3 domain-containing protein At2g31420-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 536 bits (1380), Expect = 7.68e-192
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   MGLVFISAGENMNSLSPNLTSDGVQDQDRESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60
           MGLVFISAGENMNSLSPNLTSDGVQDQDRESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE
Sbjct: 1   MGLVFISAGENMNSLSPNLTSDGVQDQDRESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60

Query: 61  RSLKRPIVQSIASPVLEASAEQPDIIFDAETESESDVNDDLDDLLIGCKQDVHEFDRILV 120
           RSLKRPIVQSIASPVLEASAEQPDIIFDAETESESDVNDDLDDLLIGCKQDVHEFDRILV
Sbjct: 61  RSLKRPIVQSIASPVLEASAEQPDIIFDAETESESDVNDDLDDLLIGCKQDVHEFDRILV 120

Query: 121 DGLPQDYKSLMIFMGASSNSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180
           DGLPQDYKSLMIFMGASSNSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE
Sbjct: 121 DGLPQDYKSLMIFMGASSNSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180

Query: 181 KLNMERWWMVEVIEPDCSVSLITLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240
           KLNMERWWMVEVIEPDCSVSLITLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS
Sbjct: 181 KLNMERWWMVEVIEPDCSVSLITLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240

Query: 241 FRVHVGEGGDGDHGRLCFMLLEICEEGDDETDS 273
           FRVHVGEGGDGDHGRLCFMLLEICEEGDDETDS
Sbjct: 241 FRVHVGEGGDGDHGRLCFMLLEICEEGDDETDS 273

[Close]

BLAST of Cp4.1LG10g07010 vs. NCBI nr
Match: KAG7033674.1 (B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 504 bits (1298), Expect = 2.34e-179
Identity = 257/273 (94.14%), Postives = 264/273 (96.70%), Query Frame = 0


Query: 1   MGLVFISAGENMNSLSPNLTSDGVQDQDRESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60
           MG+VFISAGEN NSL PNLT DGVQDQD+ESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE
Sbjct: 1   MGVVFISAGENRNSLGPNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60

Query: 61  RSLKRPIVQSIASPVLEASAEQPDIIFDAETESESDVNDDLDDLLIGCKQDVHEFDRILV 120
           RSLKRPIVQSI SPVLEASAEQPDIIFDAETES+SDVNDDLDDLLIGCKQDVHEFDRIL 
Sbjct: 61  RSLKRPIVQSIGSPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGCKQDVHEFDRILA 120

Query: 121 DGLPQDYKSLMIFMGASSNSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180
           DGLPQ+YKSLMIFMGASS SSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE
Sbjct: 121 DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180

Query: 181 KLNMERWWMVEVIEPDCSVSLITLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240
           KLNMERWW+VEVIEPDCSVSL+TLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS
Sbjct: 181 KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240

Query: 241 FRVHVGEGGDGDHGRLCFMLLEICEEGDDETDS 273
           FRVH G GGD DHGRLCFMLLEICEEGDDETD+
Sbjct: 241 FRVH-GSGGDDDHGRLCFMLLEICEEGDDETDA 272

[Close]

BLAST of Cp4.1LG10g07010 vs. NCBI nr
Match: KAG6603494.1 (B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 504 bits (1297), Expect = 3.32e-179
Identity = 256/273 (93.77%), Postives = 264/273 (96.70%), Query Frame = 0


Query: 1   MGLVFISAGENMNSLSPNLTSDGVQDQDRESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60
           MG+VFISAGEN NSL PNLT DGVQDQD+ESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE
Sbjct: 1   MGVVFISAGENRNSLGPNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60

Query: 61  RSLKRPIVQSIASPVLEASAEQPDIIFDAETESESDVNDDLDDLLIGCKQDVHEFDRILV 120
           RSLKRPI+QSI SPVLEASAEQPDIIFDAETES+SDVNDDLDDLLIGCKQDVHEFDRIL 
Sbjct: 61  RSLKRPIIQSIGSPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGCKQDVHEFDRILA 120

Query: 121 DGLPQDYKSLMIFMGASSNSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180
           DGLPQ+YKSLMIFMGASS SSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE
Sbjct: 121 DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180

Query: 181 KLNMERWWMVEVIEPDCSVSLITLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240
           KLNMERWW+VEVIEPDCSVSL+TLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS
Sbjct: 181 KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240

Query: 241 FRVHVGEGGDGDHGRLCFMLLEICEEGDDETDS 273
           FRVH G GGD DHGRLCFMLLEICEEGDDETD+
Sbjct: 241 FRVH-GSGGDDDHGRLCFMLLEICEEGDDETDA 272

[Close]

BLAST of Cp4.1LG10g07010 vs. NCBI nr
Match: XP_022950597.1 (B3 domain-containing protein At2g31420-like [Cucurbita moschata])

HSP 1 Score: 499 bits (1286), Expect = 1.52e-177
Identity = 257/273 (94.14%), Postives = 264/273 (96.70%), Query Frame = 0


Query: 1   MGLVFISAGENMNSLSPNLTSDGVQDQDRESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60
           MG+VFISAGEN NSLSPNLT DGVQDQD+ESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE
Sbjct: 1   MGVVFISAGENRNSLSPNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60

Query: 61  RSLKRPIVQSIASPVLEASAEQPDIIFDAETESESDVNDDLDDLLIGCKQDVHEFDRILV 120
           RSLKRPIVQSIASPVLEASAEQPDIIFDAETES+SDVNDDLDDLLIG KQDVHEFDRIL 
Sbjct: 61  RSLKRPIVQSIASPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGFKQDVHEFDRILA 120

Query: 121 DGLPQDYKSLMIFMGASSNSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180
           DGLPQ+YKSLMIFMGASS SSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE
Sbjct: 121 DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180

Query: 181 KLNMERWWMVEVIEPDCSVSLITLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240
           KLNMERWW+VEVIEPDCSVSL+TLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS
Sbjct: 181 KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240

Query: 241 FRVHVGEGGDGDHGRLCFMLLEICEEGDDETDS 273
           FRVH   GGD DHGRLCFMLLEICEEGDDETD+
Sbjct: 241 FRVH--GGGDDDHGRLCFMLLEICEEGDDETDA 271

[Close]

BLAST of Cp4.1LG10g07010 vs. NCBI nr
Match: XP_022978264.1 (uncharacterized protein LOC111478299 [Cucurbita maxima])

HSP 1 Score: 468 bits (1203), Expect = 6.06e-165
Identity = 249/275 (90.55%), Postives = 255/275 (92.73%), Query Frame = 0


Query: 1   MGLVFISAGENMNSLSPNLTSDGVQDQDR--ESVEDDEHLSLIKRKRSPNKRTPKRLKLL 60
           MGLVFISAGENMNS SPNL SDGVQDQD+  ESVEDDE LSLIKRKRSPNKRTPKRLKLL
Sbjct: 1   MGLVFISAGENMNSHSPNLISDGVQDQDQDQESVEDDERLSLIKRKRSPNKRTPKRLKLL 60

Query: 61  KERSLKRPIVQSIASPVLEASAEQPDIIFDAETESESDVNDDLDDLLIGCKQDVHEFDRI 120
           KERSLKRPIVQSIASPVLEASAEQPDIIFD ETES+SDV DDL DLLIG KQDV+EFDRI
Sbjct: 61  KERSLKRPIVQSIASPVLEASAEQPDIIFDTETESDSDVKDDLGDLLIGFKQDVYEFDRI 120

Query: 121 LVDGLPQDYKSLMIFMGASSNSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEE 180
           L DGL QDYKSLMIFMGASSNSSP+FLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEE
Sbjct: 121 LADGLHQDYKSLMIFMGASSNSSPSFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEE 180

Query: 181 EEKLNMERWWMVEVIEPDCSVSLITLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQL 240
           EEKLNMERWWMVEVIEPDCSVSL+TLSKWETPSGAAYVFITEWNGLVERNELKEGDL+QL
Sbjct: 181 EEKLNMERWWMVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLIQL 240

Query: 241 WSFRVHVGEGGDGDHGRLCFMLLEICEEGDDETDS 273
           WSFRVH      GDHGRLCFMLLEICE   DETDS
Sbjct: 241 WSFRVH-----GGDHGRLCFMLLEICEG--DETDS 268

[Close]

BLAST of Cp4.1LG10g07010 vs. ExPASy TrEMBL
Match: A0A6J1GF95 (B3 domain-containing protein At2g31420-like OS=Cucurbita moschata OX=3662 GN=LOC111453649 PE=4 SV=1)

HSP 1 Score: 499 bits (1286), Expect = 7.36e-178
Identity = 257/273 (94.14%), Postives = 264/273 (96.70%), Query Frame = 0


Query: 1   MGLVFISAGENMNSLSPNLTSDGVQDQDRESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60
           MG+VFISAGEN NSLSPNLT DGVQDQD+ESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE
Sbjct: 1   MGVVFISAGENRNSLSPNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60

Query: 61  RSLKRPIVQSIASPVLEASAEQPDIIFDAETESESDVNDDLDDLLIGCKQDVHEFDRILV 120
           RSLKRPIVQSIASPVLEASAEQPDIIFDAETES+SDVNDDLDDLLIG KQDVHEFDRIL 
Sbjct: 61  RSLKRPIVQSIASPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGFKQDVHEFDRILA 120

Query: 121 DGLPQDYKSLMIFMGASSNSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180
           DGLPQ+YKSLMIFMGASS SSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE
Sbjct: 121 DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180

Query: 181 KLNMERWWMVEVIEPDCSVSLITLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240
           KLNMERWW+VEVIEPDCSVSL+TLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS
Sbjct: 181 KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240

Query: 241 FRVHVGEGGDGDHGRLCFMLLEICEEGDDETDS 273
           FRVH   GGD DHGRLCFMLLEICEEGDDETD+
Sbjct: 241 FRVH--GGGDDDHGRLCFMLLEICEEGDDETDA 271

[Close]

BLAST of Cp4.1LG10g07010 vs. ExPASy TrEMBL
Match: A0A6J1ITM1 (uncharacterized protein LOC111478299 OS=Cucurbita maxima OX=3661 GN=LOC111478299 PE=4 SV=1)

HSP 1 Score: 468 bits (1203), Expect = 2.94e-165
Identity = 249/275 (90.55%), Postives = 255/275 (92.73%), Query Frame = 0


Query: 1   MGLVFISAGENMNSLSPNLTSDGVQDQDR--ESVEDDEHLSLIKRKRSPNKRTPKRLKLL 60
           MGLVFISAGENMNS SPNL SDGVQDQD+  ESVEDDE LSLIKRKRSPNKRTPKRLKLL
Sbjct: 1   MGLVFISAGENMNSHSPNLISDGVQDQDQDQESVEDDERLSLIKRKRSPNKRTPKRLKLL 60

Query: 61  KERSLKRPIVQSIASPVLEASAEQPDIIFDAETESESDVNDDLDDLLIGCKQDVHEFDRI 120
           KERSLKRPIVQSIASPVLEASAEQPDIIFD ETES+SDV DDL DLLIG KQDV+EFDRI
Sbjct: 61  KERSLKRPIVQSIASPVLEASAEQPDIIFDTETESDSDVKDDLGDLLIGFKQDVYEFDRI 120

Query: 121 LVDGLPQDYKSLMIFMGASSNSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEE 180
           L DGL QDYKSLMIFMGASSNSSP+FLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEE
Sbjct: 121 LADGLHQDYKSLMIFMGASSNSSPSFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEE 180

Query: 181 EEKLNMERWWMVEVIEPDCSVSLITLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQL 240
           EEKLNMERWWMVEVIEPDCSVSL+TLSKWETPSGAAYVFITEWNGLVERNELKEGDL+QL
Sbjct: 181 EEKLNMERWWMVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLIQL 240

Query: 241 WSFRVHVGEGGDGDHGRLCFMLLEICEEGDDETDS 273
           WSFRVH      GDHGRLCFMLLEICE   DETDS
Sbjct: 241 WSFRVH-----GGDHGRLCFMLLEICEG--DETDS 268

[Close]

BLAST of Cp4.1LG10g07010 vs. ExPASy TrEMBL
Match: A0A0A0L012 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192190 PE=4 SV=1)

HSP 1 Score: 259 bits (661), Expect = 9.08e-83
Identity = 138/249 (55.42%), Postives = 184/249 (73.90%), Query Frame = 0


Query: 20  TSDGVQDQDRESVEDDEHLSLIKRKRSPNKRTPKRLKLLKERSLKRPIVQSIASPVLEAS 79
           T++ + DQ+    + D+HL LIKRKR+  K+  +R KL +E+ LKR ++  +  P+ + S
Sbjct: 22  TNEEISDQN--PSDQDDHLPLIKRKRTRMKQLARRHKLFREKRLKRQLIHPVDDPIPK-S 81

Query: 80  AEQP---DIIFDAETESESDVNDDLDDLLIGCKQDVHEFDRILVDGLPQDYKSLMIFMGA 139
            E+P   D +FD+ETESESD + + + L+     ++ E ++  ++ +P +YK+LMIFMG 
Sbjct: 82  KEEPRGKDFVFDSETESESDTDPNQETLIFRVLAEMVESEKDSLEIIPDEYKNLMIFMGG 141

Query: 140 SSNSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEEKLNMERWWMVEVIEPD 199
           S N  P+ +++KRLKKGDV+ERRNRL+IPQRK R NFLD+EEEE+LN + WWMVE+IEPD
Sbjct: 142 SWNFCPSLVMEKRLKKGDVEERRNRLLIPQRKTRTNFLDVEEEEQLNRDVWWMVEIIEPD 201

Query: 200 CSVSLITLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWSFRVHVGEGGDGDHGRL 259
           C+VSLITLSKWET  G AYV ITEWNGLVERN+LKEGDL+QLWSFR        GD GRL
Sbjct: 202 CTVSLITLSKWETWKGVAYVLITEWNGLVERNDLKEGDLMQLWSFRA------GGDRGRL 261

Query: 260 CFMLLEICE 265
           CFMLLE+ E
Sbjct: 262 CFMLLEVEE 261

[Close]

BLAST of Cp4.1LG10g07010 vs. ExPASy TrEMBL
Match: A0A5A7SSE3 (B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold7305G00010 PE=4 SV=1)

HSP 1 Score: 254 bits (649), Expect = 4.90e-81
Identity = 132/240 (55.00%), Postives = 173/240 (72.08%), Query Frame = 0


Query: 28  DRESVEDDEHLSLIKRKRSPNKRTPKRLKLLKERSLKRPIVQSIASPVLEASAEQP--DI 87
           D+   +DD+HL LIKRKR+  K+  +R K  +E+ LKRP+   +  P+ ++  E    D+
Sbjct: 30  DQNPSDDDDHLPLIKRKRTRMKQLARRHKRDREKILKRPLKHPVNDPIPKSDEEPQGKDL 89

Query: 88  IFDAETESESDVNDDLDDLLIGCKQDVHEFDRILVDGLPQDYKSLMIFMGASSNSSPNFL 147
           +FD ETESE D + + + L      ++ E +R  ++ +P++YK LMIFMG S +  P+ +
Sbjct: 90  VFDTETESEGDADQNQETLTFMALAEIVESEREFLENIPEEYKKLMIFMGGSWDVCPSLV 149

Query: 148 LQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEEKLNMERWWMVEVIEPDCSVSLITLS 207
           ++KRLKKGDV+ERRNRL+IPQRK R  FL++EEEEKLN + WWMVE+IEPDC+VSLITLS
Sbjct: 150 MEKRLKKGDVEERRNRLLIPQRKTRTTFLEVEEEEKLNTDVWWMVEIIEPDCTVSLITLS 209

Query: 208 KWETPSGAAYVFITEWNGLVERNELKEGDLVQLWSFRVHVGEGGDGDHGRLCFMLLEICE 265
           KWET  G AYV ITEWNGLVERN+LKEGDL+QLWSFR        G  GRLCFMLLE+ E
Sbjct: 210 KWETRKGVAYVLITEWNGLVERNDLKEGDLMQLWSFRA------GGGRGRLCFMLLEVEE 263

[Close]

BLAST of Cp4.1LG10g07010 vs. ExPASy TrEMBL
Match: A0A5D3C998 (B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00460 PE=4 SV=1)

HSP 1 Score: 254 bits (649), Expect = 4.90e-81
Identity = 132/240 (55.00%), Postives = 173/240 (72.08%), Query Frame = 0


Query: 28  DRESVEDDEHLSLIKRKRSPNKRTPKRLKLLKERSLKRPIVQSIASPVLEASAEQP--DI 87
           D+   +DD+HL LIKRKR+  K+  +R K  +E+ LKRP+   +  P+ ++  E    D+
Sbjct: 30  DQNPSDDDDHLPLIKRKRTRMKQLARRHKRDREKLLKRPLKHPVNDPIPKSDEEPQGKDL 89

Query: 88  IFDAETESESDVNDDLDDLLIGCKQDVHEFDRILVDGLPQDYKSLMIFMGASSNSSPNFL 147
           +FD ETESE D + + + L      ++ E +R  ++ +P++YK LMIFMG S +  P+ +
Sbjct: 90  VFDTETESEGDADQNQETLTFMALAEIVESEREFLENIPEEYKKLMIFMGGSWDVCPSLV 149

Query: 148 LQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEEKLNMERWWMVEVIEPDCSVSLITLS 207
           ++KRLKKGDV+ERRNRL+IPQRK R  FL++EEEEKLN + WWMVE+IEPDC+VSLITLS
Sbjct: 150 MEKRLKKGDVEERRNRLLIPQRKTRTTFLEVEEEEKLNTDVWWMVEIIEPDCTVSLITLS 209

Query: 208 KWETPSGAAYVFITEWNGLVERNELKEGDLVQLWSFRVHVGEGGDGDHGRLCFMLLEICE 265
           KWET  G AYV ITEWNGLVERN+LKEGDL+QLWSFR        G  GRLCFMLLE+ E
Sbjct: 210 KWETRKGVAYVLITEWNGLVERNDLKEGDLMQLWSFRA------GGGRGRLCFMLLEVEE 263

[Close]

BLAST of Cp4.1LG10g07010 vs. TAIR 10
Match: AT1G05920.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09
Identity = 46/133 (34.59%), Postives = 69/133 (51.88%), Query Frame = 0


Query: 124 PQDYKSLMIFMGASSNS-SPNFLLQKRLKKGDVDERRNRLVIP-QRKMRNNFLDLEE--- 183
           PQ+ + L+  M   + +  P  +++K L   DVD R+NRL IP    ++N+FL L+E   
Sbjct: 161 PQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNRLSIPINTVIQNDFLTLDESRL 220

Query: 184 --EEKLNMERWWMVEVIEPDCSVSL--ITLSKW--ETPSGAAY---VFITEWNGLVERNE 243
             E+++  E    V     D       +   +W   T SG++Y   V   EW+ +VE N 
Sbjct: 221 IDEDEITNEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDSGSSYWSFVLRGEWSNVVETNG 280

[Close]

BLAST of Cp4.1LG10g07010 vs. TAIR 10
Match: AT5G24050.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 51.2 bits (121), Expect = 1.5e-06
Identity = 39/110 (35.45%), Postives = 53/110 (48.18%), Query Frame = 0


Query: 145 LLQKRLKKGDVDERRNRLVIP-QRKMRNNFLDLEE----EEKLNMERWWMVEVIEPD--C 204
           + +K L   DV+  +NRL +P    +RN+FL   E     E +N      V  I  D  C
Sbjct: 219 IFEKTLFVTDVNPTKNRLSMPFNNLLRNDFLTSVESIIINEDINNNNKIGVGAILVDQRC 278

Query: 205 SVSLITLSKWETPSGA-----AYVFITEWNGLVERNELKEGDLVQLWSFR 243
               + L +WE    +     +Y  I  WN +VE N LKEGD + LWSFR
Sbjct: 279 KKWGVMLKRWEMKKESGKGSWSYNLICGWNDIVEANRLKEGDNITLWSFR 328

[Close]

BLAST of Cp4.1LG10g07010 vs. TAIR 10
Match: AT3G24850.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-05
Identity = 38/128 (29.69%), Postives = 60/128 (46.88%), Query Frame = 0


Query: 145 LLQKRLKKGDVDERRNRLVIP-QRKMRNNFLDLEE-----EEKLNMERWWMVEVIEPDCS 204
           + +K L   D++  +NRL +P    ++N+FL   E     E+  N ++  +  ++    S
Sbjct: 229 IFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKEDINNNKKIGVGAILVDQRS 288

Query: 205 VSL-ITLSKWETPSGAA-----YVFITEWNGLVERNELKEGDLVQLWSFRVHVGEGGDGD 261
           V   + L +WE    +      Y  I  WN +VE N LKEGD + +WSFR          
Sbjct: 289 VKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRC--------- 347

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g07010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5RM09	2.7e-08	34.59	B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05...	[more]
Q9LSF7	2.1e-05	30.70	B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25...	[more]
Q9FLV7	2.1e-05	35.45	B3 domain-containing protein At5g24050 OS=Arabidopsis thaliana OX=3702 GN=At5g24...	[more]
Q9LRX6	2.4e-04	29.69	Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cp4.1LG10g07010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023544949.1	7.68e-192	100.00	B3 domain-containing protein At2g31420-like [Cucurbita pepo subsp. pepo]	[more]
KAG7033674.1	2.34e-179	94.14	B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG6603494.1	3.32e-179	93.77	B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022950597.1	1.52e-177	94.14	B3 domain-containing protein At2g31420-like [Cucurbita moschata]	[more]
XP_022978264.1	6.06e-165	90.55	uncharacterized protein LOC111478299 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG10g07010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GF95	7.36e-178	94.14	B3 domain-containing protein At2g31420-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1ITM1	2.94e-165	90.55	uncharacterized protein LOC111478299 OS=Cucurbita maxima OX=3661 GN=LOC111478299...	[more]
A0A0A0L012	9.08e-83	55.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192190 PE=4 SV=1	[more]
A0A5A7SSE3	4.90e-81	55.00	B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5D3C998	4.90e-81	55.00	B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of Cp4.1LG10g07010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05920.1	1.9e-09	34.59	Domain of unknown function (DUF313)	[more]
AT5G24050.1	1.5e-06	35.45	Domain of unknown function (DUF313)	[more]
AT3G24850.1	1.7e-05	29.69	Domain of unknown function (DUF313)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005508	B3 domain-containing protein At2g31720-like	PFAM	PF03754	DUF313	coord: 128..226 e-value: 1.8E-9 score: 37.8
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 27..264
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 135..249 e-value: 6.7E-16 score: 60.1
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 141..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..36
None	No IPR available	PANTHER	PTHR31541:SF25	DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED	coord: 27..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g07010.1	Cp4.1LG10g07010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding