Cp4.1LG10g06980 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g06980
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	binding partner of ACD11 1
Location	Cp4.1LG10: 6182841 .. 6187190 (+)
RNA-Seq Expression	Cp4.1LG10g06980
Synteny	Cp4.1LG10g06980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAGAAACTGCTTTCAAATTCCCTCTAAGCTCCCATCTCTGCAAGTTTCTCTCTACTTTCTCTCTACTTTCTCTCTCTACAAGAAATCGACGAGTTCTTCGATTATTCGCCATGCAGGTAACGGATCCTTGAATCTTCACTGATTTTCTTCCATTTTTGCTCTATGATTTCGGTAATCAACTTCAATTTTTCGCTTGGTTTTGATCTTGATTTCTTCTGCTCAGTCTCAGACGCGGACGGTTCAAGCCAGGAACGTGTCGGATCTAGCTACTGAGAGGGAGATTCATGAGTTCTTCTCCTTTTCTGGAGAGATTGAGCACGTAGAAATCCAATGGTAGGTGATTGACTGTGTTACTGTGAACAGAACTGCAAAAAGTGGAAAAGTTAAGATGTGTGTGATTGATCGATTTCCTTTTCTATGCGGCTGATTTATTTTAGATTTCGTACTGTTTGGCATCCGAGAAAAAATAGTGAGCAATTATTAGCACGAGAGTTTTGTGGTTTTCCNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTAAATATTTTCTTGTCGGTGCAGTGAGCAGGGGCAATCGAAGACTGCGTTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGTATTTCTTCGCTTCGATTCTCTTTCGTATCCACGAAGTCAGTTCTCGTGATGCGTTTGTTGAACTTGTTAACCCTTTTACAATGAATTTGAAAATGCGTCTAGTTGAAGTTTGGTTCGGTCTAAATTTAGTTATGTTTACCTTCTTATTTAAGGAAGGTTTATTTAAGGAAGGTTGTTAGGGCATGTTTATTTTGAAATGGTTAATTTACTTTTGCAATTTTCAAAATCACTTCGAAATACATCTTTAGTTGTTCAAAATCATGTTTGATTTTACTCTTTTAAAAGCATTTTTCATATAATTAATATAGATTTTGAATCATTAAAACCATATTTTGGAGTGAATTTGATAATGGCAGAAGTGATTTAACTCTTTCAAAATCACTCCCACACTTGCCCTTAGTGTCCAGTTGGTTCTTTGTCCTTTTAAGTTTCTTTCCTTCATTTTCTTGCCATTGGGTTTGATTGAATTGAGAAGTGAATATGAGAAGAATCTCGTTATTTTTTTGGGGAATACATTTTATGTTAAAGATATTCAAGTTTTTTAGAAGAAGATTTTCTACAGGTAACCTCAAACATAACAGCAGAAGTTTCGTATGAGCTAATATACGATTTCTTCATAGAAGCCACCCTGTGTTTGCATTTTGTCTTTCTGAGAATACCCCATCCTTTCTAATAATAATTATAAAAAAAAAAAAAAAAAACCAAGAAAAAAAGAACCGGAGATGAGTTAGCAAACTAATGTTTATAGAGGTTTTGGAAAAGTTTTTATTTTTATTTTTTAAGAACTATGATGGATTTTTGGGTTAATTTTTATTTCGTATCACTTTTTAGAAGTCCATAATTTTGGAGTGAAAAACAACTCGAGGAAAGAAAGGATGGAAAGAGAAAAAAAAGAAGAGATTAGTGTAATGGTTGAAATGAAACTATTAGACCGAACTTTATAAACATCTGCCTTGCTTTTACTTTTTGTTAAGAATAAAAGCATTGGTGAGAAGTAGTACTAAATGAACGTGTTTATAGAAAAAGAAGGAAGTTAATAGCTTTTTTCTGCATGATCATTTCTTTACATGAAACTATTAGACTGAACTTTATGAACAGAAGTTTAAAAACATCTGCATTGCTTTTACTTTTTGTTACGAATAAAAGCATCGGTGAGAAGTAGTACTAAATGGACATATTTATAGAAAAAGAAGGAAGTTAATAGCTTTTCTCCGCATGATCATTTCTTTACCCAATAATGGAATTATTTGAACTTTTCTTCATGCAGTAATGGAAATATACCTTTTCTTCTCCATATCTCGCGGATGCCATAAGCCACTATAAACAATTTATATTATTTATTTTTTTTGCCACGCAGGGTGCAACAATTGTAGATCAGATAGTGAGCATATCTCCTGCAGAAAATTATGTACCGAGAAGAGAAATGCAGGTATTATTTTTGTGTTCGAATATATTTCCAGGTCTGTCGAGCTGTTTGTTCTATATCCAATACTTTAAATTTTCTATGTTTGCAGGAAGTACGGGCTGTGGACAATGCTGCACCTCTCACTCCTACAGAAAATAATTTTCCTAGCATCGAGGTAAATGTGTTGATACCCTCAATGAATATCGAGTATTTGAGCAACATTTTCCTTCACGTTGATGTGCTATTAATGATAAACCAAGGCTGGGGAGTTTCATCAAATGAAAAAGTGTAGGACATGTTTATTGTTTCTGTGTTCAGAGTTTCTTAAATCGTTGTAGATGGATGAAAAATAAAAGCTCCATTTAATGCATGCCATCATGAAGCTCACTAACCAGGGAAACTATGTGATCTTGATTTCCTTGCCTTTTTTTAACTATATAAGTGGATGCTGAGGCATCTTTTCTTTTTTCCCATCTAAAATCTCTCGTCTTTACACAGGATTCTGCGAGCCAGCCTAGCAGTGGAAGAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAAGTGTGCTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTTGATGAAAAACATCAGTTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAAGGTTGGGCTCACAGAGAAATTGACAGTTGGGATTTCGGTGGTTAACGAGAAAGTCAAGTCTGTAGATCAAAAGCTTCATGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAAATCAATGATACAGGATCTGCTGTCAAAACAAGCAAGTATGCATCATGATTCTTGAGGAAACTTTAGTTGGCATTAACTTATCCCCTATGCAATTTTTACTTGCCTTCTGCTATATTCAAAATTTAGAACTCAAACATTCTTCATACCTCGCAAGAAAGCCGAAAATTAGTTTTCTAAAACTTCTCCCAAACAACTCCCTAGTGTTTCGATTTCTCGAGAACTTTAAACTGATATAGTCATATATTTCTACCGTTCAAATAAATTACAATGGTTCTACTATTCATTCTAAATAAAGCAGTTATGACAATAGACAGAAGTGACTTAATTGTTTCACTCCATCTTGGTGTCGAGCAGGTATGTGACGTCGGGTGCTGCTTGGCTAAACGGTGCTTTTGGCAAGGTTGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGAGAAATTCCATTTGGCTATGTCGAACTTAACCTCAAAGGTGCGTCTATGAAACCCTTTTCTCTATGATGACTTAAAACTTATGATTCTTAGGAAAATTTCCTTGCTGTGAGTAGCTTAACTTAGCACATCTGTACCTAAGAACAATCGTAGACTACAGTTTTTATAAATTAGTTACTCAAATATATATATTTTTCTAGTTTTCTGTTTTTTAAACTCAATTTCCTATCATTCCTCTGCTATTGTAGAATCAACCAAGTAATTATTTCAATGTTGGTTAATGTCCTTGGTGAATATAACTTCTTGTTCATAGTGAACCTAACTTCTTGATGCAGCGGATTCTGTAGCTTCAAATAGATTAAACCAAAACCATGCCCAAAAAGGAAAATTTCCCCAAATAAGAGAGCCATCTAAAACCTCATTTTGTTCATGTCTCCTTCAAAGAACCTAGGCTGTTTAAAGTCTTGAAAGAAAATGCAAGTAATTTGCCAAATCCATACCCAAGAATGAATAGTTCCCAATAAGAAAGCTCTCAGAAACCTCATTTCATTCTTGTTCAAAAGCTTCTGCCGAAAAACCCAAGTTCGGCTATTCCGAGTCGAACAACAATATAACGGAAATAACCAATCCAAGAAAAGTAACGAACGTAAATAATATATTGAATCATGAAGTTTACTCTCTATCCTTTGTTTTTCAAACGTGCAGGGACATCCAGTTGCTGCCTGAGCTTAAAACTTGGGCTTCAGGAAAGTCATCACATGGATTGGCTGTGCTTGTGGGGGATTGAAATGAGTTTCTTAAATTCTATTTTCTTCATGCTATTTATTCTTGAGGACTGCTCCATTTATTTATTTTCTATCTTTATGTGGTTATTTTAGTATTATTCTTATTATATTGTTCATATTCTTGGGTGTGTTTGGCTGATGACAGTTTTGCATTTGTAAGATTGGTTTATGGAAATGTAAAGAAGATCCAATTATGGTTTGTCTTATTATTTGTTTGGGAGTATCAAGTTCGTGGTTCAGCTTGATCGCTCGTTGCCTTTCG

mRNA sequence

TGGAGAAACTGCTTTCAAATTCCCTCTAAGCTCCCATCTCTGCAAGTTTCTCTCTACTTTCTCTCTACTTTCTCTCTCTACAAGAAATCGACGAGTTCTTCGATTATTCGCCATGCAGTCTCAGACGCGGACGGTTCAAGCCAGGAACGTGTCGGATCTAGCTACTGAGAGGGAGATTCATGAGTTCTTCTCCTTTTCTGGAGAGATTGAGCACGGGCAATCGAAGACTGCGTTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGTGCAACAATTGTAGATCAGATAGTGAGCATATCTCCTGCAGAAAATTATGTACCGAGAAGAGAAATGCAGGAAGTACGGGCTGTGGACAATGCTGCACCTCTCACTCCTACAGAAAATAATTTTCCTAGCATCGAGGATTCTGCGAGCCAGCCTAGCAGTGGAAGAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAAGTGTGCTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTTGATGAAAAACATCAGTTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAAGGTTGGGCTCACAGAGAAATTGACAGTTGGGATTTCGGTGGTTAACGAGAAAGTCAAGTCTGTAGATCAAAAGCTTCATGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAAATCAATGATACAGGATCTGCTGTCAAAACAAGCAAGTATGTGACGTCGGGTGCTGCTTGGCTAAACGGTGCTTTTGGCAAGGTTGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGAGAAATTCCATTTGGCTATGTCGAACTTAACCTCAAAGGGACATCCAGTTGCTGCCTGAGCTTAAAACTTGGGCTTCAGGAAAGTCATCACATGGATTGGCTGTGCTTGTGGGGGATTGAAATGAGTTTCTTAAATTCTATTTTCTTCATGCTATTTATTCTTGAGGACTGCTCCATTTATTTATTTTCTATCTTTATGTGGTTATTTTAGTATTATTCTTATTATATTGTTCATATTCTTGGGTGTGTTTGGCTGATGACAGTTTTGCATTTGTAAGATTGGTTTATGGAAATGTAAAGAAGATCCAATTATGGTTTGTCTTATTATTTGTTTGGGAGTATCAAGTTCGTGGTTCAGCTTGATCGCTCGTTGCCTTTCG

Coding sequence (CDS)

ATGCAGTCTCAGACGCGGACGGTTCAAGCCAGGAACGTGTCGGATCTAGCTACTGAGAGGGAGATTCATGAGTTCTTCTCCTTTTCTGGAGAGATTGAGCACGGGCAATCGAAGACTGCGTTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGTGCAACAATTGTAGATCAGATAGTGAGCATATCTCCTGCAGAAAATTATGTACCGAGAAGAGAAATGCAGGAAGTACGGGCTGTGGACAATGCTGCACCTCTCACTCCTACAGAAAATAATTTTCCTAGCATCGAGGATTCTGCGAGCCAGCCTAGCAGTGGAAGAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAAGTGTGCTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTTGATGAAAAACATCAGTTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAAGGTTGGGCTCACAGAGAAATTGACAGTTGGGATTTCGGTGGTTAACGAGAAAGTCAAGTCTGTAGATCAAAAGCTTCATGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAAATCAATGATACAGGATCTGCTGTCAAAACAAGCAAGTATGTGACGTCGGGTGCTGCTTGGCTAAACGGTGCTTTTGGCAAGGTTGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGAGAAATTCCATTTGGCTATGTCGAACTTAACCTCAAAGGGACATCCAGTTGCTGCCTGA

Protein sequence

MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKGHPVAA

Homology

[Close]

BLAST of Cp4.1LG10g06980 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.7e-47
Identity = 110/251 (43.82%), Postives = 157/251 (62.55%), Query Frame = 0


Query: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIE----HGQSKTAFVTFRDPKALEIALLL 60
           M SQ R+V+  N+S  ATE +I EFFSFSGE+E         +A+VTF++ +  E A+LL
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEHSAYVTFKETQGAETAVLL 60

Query: 61  SGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGRMYV 120
           SGA+I DQ V I  A NY P                       P+   + +Q S     V
Sbjct: 61  SGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAESVV 120

Query: 121 NRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGIS 180
            +A++VV+S+LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+K+GL++KLT G S
Sbjct: 121 QKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTS 180

Query: 181 VVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKA 240
           +VNEK+K+VDQ   V+++T +   AAE+ ++  GSAV  ++YV +G +W  GAF +VA+A
Sbjct: 181 LVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQA 228

Query: 241 GQAAGTKTREK 248
               G KT+EK
Sbjct: 241 AGEVGQKTKEK 228

[Close]

BLAST of Cp4.1LG10g06980 vs. NCBI nr
Match: XP_022950330.1 (binding partner of ACD11 1 [Cucurbita moschata] >XP_022978262.1 binding partner of ACD11 1 [Cucurbita maxima] >XP_023544994.1 binding partner of ACD11 1 [Cucurbita pepo subsp. pepo] >KAG6603478.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 489 bits (1260), Expect = 9.71e-174
Identity = 264/271 (97.42%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEH-------GQSKTAFVTFRDPKALEIA 60
           MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEH       GQSKTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120
           LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR
Sbjct: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120

Query: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180
           MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV
Sbjct: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA 264
           AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA 271

[Close]

BLAST of Cp4.1LG10g06980 vs. NCBI nr
Match: KAG7033660.1 (Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 477 bits (1227), Expect = 6.12e-168
Identity = 258/265 (97.36%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEH-------GQSKTAFVTFRDPKALEIA 60
           MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEH       GQSKTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120
           LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR
Sbjct: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120

Query: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180
           MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV
Sbjct: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSNLTSK 258
           AKAGQAAGTKTREKFHLAMSNLTSK
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLTSK 265

[Close]

BLAST of Cp4.1LG10g06980 vs. NCBI nr
Match: XP_038881171.1 (binding partner of ACD11 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 451 bits (1159), Expect = 2.38e-158
Identity = 245/271 (90.41%), Postives = 253/271 (93.36%), Query Frame = 0


Query: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEH-------GQSKTAFVTFRDPKALEIA 60
           MQSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH       GQSKTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120
           LLLSGATIVDQIVSIS AEN+VPRREMQEVR VDNAA LTPTENNFPS EDSASQPSSG+
Sbjct: 61  LLLSGATIVDQIVSISLAENHVPRREMQEVRVVDNAACLTPTENNFPSTEDSASQPSSGK 120

Query: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180
           MYVNRAQ VVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTV
Sbjct: 121 MYVNRAQVVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240
           GISVVNEKVKSVDQ LHVSDKTMAAIFAAERK+NDTGSAVKTSKYVT+GAAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA 264
           AKAGQAAGTKTREKFHLAMSNLTSK   V A
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLTSKESSVVA 271

[Close]

BLAST of Cp4.1LG10g06980 vs. NCBI nr
Match: XP_004151849.1 (binding partner of ACD11 1 [Cucumis sativus])

HSP 1 Score: 448 bits (1153), Expect = 1.96e-157
Identity = 242/271 (89.30%), Postives = 253/271 (93.36%), Query Frame = 0


Query: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEH-------GQSKTAFVTFRDPKALEIA 60
           MQSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH       G+SKTAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120
           LLLSGATIVD+IVSI+PAEN+VPRREMQEVR  DNAA LTPTENN PSIEDSASQPSSG+
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGK 120

Query: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180
           MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA 264
           AKAGQAAGTKTREKFHLAMSNL SK  PV A
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of Cp4.1LG10g06980 vs. NCBI nr
Match: XP_008462804.1 (PREDICTED: binding partner of ACD11 1-like [Cucumis melo] >KAA0066322.1 binding partner of ACD11 1-like [Cucumis melo var. makuwa] >TYK00958.1 binding partner of ACD11 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 444 bits (1142), Expect = 9.27e-156
Identity = 240/271 (88.56%), Postives = 252/271 (92.99%), Query Frame = 0


Query: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEH-------GQSKTAFVTFRDPKALEIA 60
           MQSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH       G+SKTAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120
           LLLSGATIVD+IVSI+PAEN+VPRRE+QEVR  DNAA LTPTENN PS EDSASQPSSG+
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREIQEVRVADNAACLTPTENNSPSREDSASQPSSGK 120

Query: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180
           MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA 264
           AKAGQAAGTKTREKFHLAMSNL SK  PV A
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of Cp4.1LG10g06980 vs. ExPASy TrEMBL
Match: A0A6J1IKN1 (binding partner of ACD11 1 OS=Cucurbita maxima OX=3661 GN=LOC111478298 PE=4 SV=1)

HSP 1 Score: 489 bits (1260), Expect = 4.70e-174
Identity = 264/271 (97.42%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEH-------GQSKTAFVTFRDPKALEIA 60
           MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEH       GQSKTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120
           LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR
Sbjct: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120

Query: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180
           MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV
Sbjct: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA 264
           AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA 271

[Close]

BLAST of Cp4.1LG10g06980 vs. ExPASy TrEMBL
Match: A0A6J1GFF4 (binding partner of ACD11 1 OS=Cucurbita moschata OX=3662 GN=LOC111453443 PE=4 SV=1)

HSP 1 Score: 489 bits (1260), Expect = 4.70e-174
Identity = 264/271 (97.42%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEH-------GQSKTAFVTFRDPKALEIA 60
           MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEH       GQSKTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120
           LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR
Sbjct: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120

Query: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180
           MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV
Sbjct: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA 264
           AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA 271

[Close]

BLAST of Cp4.1LG10g06980 vs. ExPASy TrEMBL
Match: A0A0A0LNE8 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G431170 PE=4 SV=1)

HSP 1 Score: 448 bits (1153), Expect = 9.47e-158
Identity = 242/271 (89.30%), Postives = 253/271 (93.36%), Query Frame = 0


Query: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEH-------GQSKTAFVTFRDPKALEIA 60
           MQSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH       G+SKTAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120
           LLLSGATIVD+IVSI+PAEN+VPRREMQEVR  DNAA LTPTENN PSIEDSASQPSSG+
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGK 120

Query: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180
           MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA 264
           AKAGQAAGTKTREKFHLAMSNL SK  PV A
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of Cp4.1LG10g06980 vs. ExPASy TrEMBL
Match: A0A5D3BPG7 (Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001350 PE=4 SV=1)

HSP 1 Score: 444 bits (1142), Expect = 4.49e-156
Identity = 240/271 (88.56%), Postives = 252/271 (92.99%), Query Frame = 0


Query: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEH-------GQSKTAFVTFRDPKALEIA 60
           MQSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH       G+SKTAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120
           LLLSGATIVD+IVSI+PAEN+VPRRE+QEVR  DNAA LTPTENN PS EDSASQPSSG+
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREIQEVRVADNAACLTPTENNSPSREDSASQPSSGK 120

Query: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180
           MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA 264
           AKAGQAAGTKTREKFHLAMSNL SK  PV A
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of Cp4.1LG10g06980 vs. ExPASy TrEMBL
Match: A0A1S3CIA3 (binding partner of ACD11 1-like OS=Cucumis melo OX=3656 GN=LOC103501087 PE=4 SV=1)

HSP 1 Score: 444 bits (1142), Expect = 4.49e-156
Identity = 240/271 (88.56%), Postives = 252/271 (92.99%), Query Frame = 0


Query: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEH-------GQSKTAFVTFRDPKALEIA 60
           MQSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH       G+SKTAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120
           LLLSGATIVD+IVSI+PAEN+VPRRE+QEVR  DNAA LTPTENN PS EDSASQPSSG+
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREIQEVRVADNAACLTPTENNSPSREDSASQPSSGK 120

Query: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180
           MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA 264
           AKAGQAAGTKTREKFHLAMSNL SK  PV A
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of Cp4.1LG10g06980 vs. TAIR 10
Match: AT5G32450.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 351.3 bits (900), Expect = 6.8e-97
Identity = 191/266 (71.80%), Postives = 225/266 (84.59%), Query Frame = 0


Query: 5   TRTVQARNVSDLATEREIHEFFSFSGEIEH-------GQSKTAFVTFRDPKALEIALLLS 64
           TR+VQ  NVSDLATEREIHEFFSFSG+IEH       GQS+ AFVTF DPKALEIALLLS
Sbjct: 4   TRSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLS 63

Query: 65  GATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGRMYVN 124
           GATIVDQIV+I+ AENYV RRE QEVR +DNA PL   E+   + +   +   + R YV+
Sbjct: 64  GATIVDQIVTITRAENYVQRRETQEVRMLDNAMPLGLQES---TTQTKTNMDGNSRAYVS 123

Query: 125 RAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISV 184
           +AQ+VVA+VLAKGSA+GQDA+NKAKAFDEKHQL A+ASAKV SFD++VGLTEKL+VGIS 
Sbjct: 124 KAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVGLTEKLSVGISA 183

Query: 185 VNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAG 244
           VNEKVKSVDQKL VSDKTMAAIFAAERK+NDTGSAVK+S+YVT+GAAW +GAF KVA+ G
Sbjct: 184 VNEKVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRYVTAGAAWFSGAFSKVARVG 243

Query: 245 QAAGTKTREKFHLAMSNLTSKGHPVA 264
           Q AG+KT+EKF+LA+SN++SK  P+A
Sbjct: 244 QVAGSKTKEKFNLAVSNMSSKDTPIA 266

[Close]

BLAST of Cp4.1LG10g06980 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 199.5 bits (506), Expect = 3.3e-51
Identity = 119/252 (47.22%), Postives = 165/252 (65.48%), Query Frame = 0


Query: 7   TVQARNVSDLATEREIHEFFSFSGEI-------EHGQSKTAFVTFRDPKALEIALLLSGA 66
           TV+  NVS  AT+R++ EFFSFSG+I       E  ++K A+VTF+D +  E A+LLSGA
Sbjct: 5   TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGA 64

Query: 67  TIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGRMYVNRA 126
           TIVD  V +S A +Y    E          A L P        +DS   P +G   + +A
Sbjct: 65  TIVDSSVIVSMAPDYQLSPEA--------LASLEP--------KDSNKSPKAGDSVLRKA 124

Query: 127 QEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVN 186
           ++VV+S+LAKG  +G+DA+ KAK+ DEKHQLT++ASAKV SFD+K+G T+K+  G  VV 
Sbjct: 125 EDVVSSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVG 184

Query: 187 EKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQA 246
           EKV+ VDQK  VS+KT +AI AAE+ +++ GSA+  ++YV +GA W+ GAF KVAKA + 
Sbjct: 185 EKVREVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEE 240

Query: 247 AGTKTREKFHLA 252
            G K +EK  +A
Sbjct: 245 VGQKAKEKVGMA 240

[Close]

BLAST of Cp4.1LG10g06980 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 190.3 bits (482), Expect = 2.0e-48
Identity = 108/253 (42.69%), Postives = 171/253 (67.59%), Query Frame = 0


Query: 7   TVQARNVSDLATEREIHEFFSFSGEI-------EHGQSKTAFVTFRDPKALEIALLLSGA 66
           TV+  NVS  ATER++ EFFSFSG+I       E+  SK A+VTF+D +  E A+LL+G+
Sbjct: 5   TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGS 64

Query: 67  TIVDQIVSISPAENY-VPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGRMYVNR 126
           TIVD  V+++ + +Y +P   +  + ++  +      +++ P+ ED +           +
Sbjct: 65  TIVDSSVTVTMSPDYQLPPDALASIESLKES-----NKSSSPTREDVS--------VFRK 124

Query: 127 AQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVV 186
           A++VV+ +++KG  +G+DA+ KAK+ DEKHQLT++ASA+V SFD+++G TEK+  G +VV
Sbjct: 125 AEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVV 184

Query: 187 NEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQ 246
           +EKVK VDQK  V++KT +AI AAE+ +++ GSA+  ++YV +GA W+ GAF +V+KA +
Sbjct: 185 SEKVKEVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAE 244

Query: 247 AAGTKTREKFHLA 252
             G K +EK  LA
Sbjct: 245 EVGQKAKEKVGLA 244

[Close]

BLAST of Cp4.1LG10g06980 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 )

HSP 1 Score: 189.9 bits (481), Expect = 2.6e-48
Identity = 110/251 (43.82%), Postives = 157/251 (62.55%), Query Frame = 0


Query: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIE----HGQSKTAFVTFRDPKALEIALLL 60
           M SQ R+V+  N+S  ATE +I EFFSFSGE+E         +A+VTF++ +  E A+LL
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEHSAYVTFKETQGAETAVLL 60

Query: 61  SGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGRMYV 120
           SGA+I DQ V I  A NY P                       P+   + +Q S     V
Sbjct: 61  SGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAESVV 120

Query: 121 NRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGIS 180
            +A++VV+S+LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+K+GL++KLT G S
Sbjct: 121 QKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTS 180

Query: 181 VVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKA 240
           +VNEK+K+VDQ   V+++T +   AAE+ ++  GSAV  ++YV +G +W  GAF +VA+A
Sbjct: 181 LVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQA 228

Query: 241 GQAAGTKTREK 248
               G KT+EK
Sbjct: 241 AGEVGQKTKEK 228

[Close]

BLAST of Cp4.1LG10g06980 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 189.1 bits (479), Expect = 4.5e-48
Identity = 110/252 (43.65%), Postives = 157/252 (62.30%), Query Frame = 0


Query: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIE-----HGQSKTAFVTFRDPKALEIALL 60
           M SQ R+V+  N+S  ATE +I EFFSFSGE+E          +A+VTF++ +  E A+L
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNEHSAYVTFKETQGAETAVL 60

Query: 61  LSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGRMY 120
           LSGA+I DQ V I  A NY P                       P+   + +Q S     
Sbjct: 61  LSGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAESV 120

Query: 121 VNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGI 180
           V +A++VV+S+LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+K+GL++KLT G 
Sbjct: 121 VQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGT 180

Query: 181 SVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAK 240
           S+VNEK+K+VDQ   V+++T +   AAE+ ++  GSAV  ++YV +G +W  GAF +VA+
Sbjct: 181 SLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQ 229

Query: 241 AGQAAGTKTREK 248
           A    G KT+EK
Sbjct: 241 AAGEVGQKTKEK 229

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g06980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	3.7e-47	43.82	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]

BLAST of Cp4.1LG10g06980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950330.1	9.71e-174	97.42	binding partner of ACD11 1 [Cucurbita moschata] >XP_022978262.1 binding partner ...	[more]
KAG7033660.1	6.12e-168	97.36	Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038881171.1	2.38e-158	90.41	binding partner of ACD11 1-like isoform X2 [Benincasa hispida]	[more]
XP_004151849.1	1.96e-157	89.30	binding partner of ACD11 1 [Cucumis sativus]	[more]
XP_008462804.1	9.27e-156	88.56	PREDICTED: binding partner of ACD11 1-like [Cucumis melo] >KAA0066322.1 binding ...	[more]

BLAST of Cp4.1LG10g06980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IKN1	4.70e-174	97.42	binding partner of ACD11 1 OS=Cucurbita maxima OX=3661 GN=LOC111478298 PE=4 SV=1	[more]
A0A6J1GFF4	4.70e-174	97.42	binding partner of ACD11 1 OS=Cucurbita moschata OX=3662 GN=LOC111453443 PE=4 SV...	[more]
A0A0A0LNE8	9.47e-158	89.30	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G431170 PE=4 SV...	[more]
A0A5D3BPG7	4.49e-156	88.56	Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CIA3	4.49e-156	88.56	binding partner of ACD11 1-like OS=Cucumis melo OX=3656 GN=LOC103501087 PE=4 SV=...	[more]

BLAST of Cp4.1LG10g06980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G32450.1	6.8e-97	71.80	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	3.3e-51	47.22	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	2.0e-48	42.69	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.1	2.6e-48	43.82	binding partner of acd11 1	[more]
AT5G16840.2	4.5e-48	43.65	binding partner of acd11 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..69 e-value: 0.0011 score: 28.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..73 score: 9.149255
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..91 e-value: 1.5E-6 score: 30.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..110
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 3..263
None	No IPR available	PANTHER	PTHR32343:SF61	RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED	coord: 3..263
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g06980.1	Cp4.1LG10g06980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding