Cp4.1LG10g06690 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAAAAACACCAACATTTCATAAATTGATAGTTAGGTTAGATGGGTAAGATGGTAAATTCGGAGGAGGAAGGGGGAAGAAACGGAAATGGCGAACAGAAGTGGAGAGAATGTATATGCTGAGTTCGGCCATTGGTTTTGTCAAACTTTGGACGAAAGGTATGCAAAATTAAGCCCCCTCCCTTTTATTCCCATCCAACCTTTTCATCCCCCAACCCCCGTCATATATATACGCGTGTGCGTCTCTATTTCTCTCTCGCCTTCCCTTCTTGATCGTTGCTTCATCCAACGTCCTGCCCAAGCTTCCAGCTTCGGATGACATTTTGATTTACACCATTCATTTCAAAACATTCAATCCCTTTTGGCTTTCGGGTATGTTTTCACATCATTCATTGAAATCTTTTGTTCCCTCTCTTTCTTCTCTATCTCCGACTCTCTGTTGTCTTTTGTTGTTATGAATGTTCACGTTTTGATCTTCAGCTTTTCTCCATAGTCTAGACTGTATCGAAGTTTTCTGTTTCTCTTTGTATTTGCAAATTTTCACTGTCACCTCTTAATCGATCTGCTCACAATCATTTCCAGTGATCTGATCGTGGTTGTTTTCTTGTTTGGTTCTCTGAATAAAGTCAAACTTTGCTTGTCACATTTTTGAATCGTTGTCGTGAGGATCTCTAATTCAGCCAAGAACATTTTTTTAGTGCGTTTTTAATGTTGCTTTTTCGAAGTATGATGGAATGCTCCACTGTTAGTTATCGACTCTGTTTGTCGCTCTGAGGTGAAGCTAACCTTATTCATGATGTTCATGTTCATTGATTAAGTGTAACCTACCTCTGTTTTTGCAAGTGAATGCTATTGCACATTCTTTCTTGACATTTCCTCGAAGGTAAAGGCCACCGGGTAGGCATTAATGCATTTGATTATGGAAGATCTTCTTGGCTCTTTGATCTTTTTTGGATCTTTATTTGATCATTAAAACTAAACTCTTTGCAGAATTTCCTTAGCAGTGGCTGGTTTCCTAATTTATTTTTATTTTTTTTCTTTATTGGGTCTGCTAAGTGTGTGGGCATTGATATTTTACTTTTGGCTATATATATCGATGAGGTCTCGTGTGTGATTTTTCGTCTTTGTTCTTATTCTTTCAACCTTCGTATTTTTCTTTTAATGTATCAATTTATTTCAATTGAATCCTTGATGTTAAATTTTACATGAAGTGAAAAATAAGGTGGTCGGCATTGCCAGAAAAGACATTTGTTTTTGTATTTGAATACTGAAGTTGAATTGTCCACAGAGCACACTGCTTTTATCTTCTTGAACAGCTGTTGTGTTTTGATATTCATGTTCTTGAATGCAGGATTTATTGGTTAATGCTGTAGTTGGCTGCTTGATGGAAGTCTGTTAGTTGGGTGCTTTCAGATAAATTTTCATTTGCTGCGATTGTTGATATCATTCACTTTGGAACTGCAACATTCTTCATTAAAATGTCGCTCTTGTCAAAGTTGCGCTGTATCACCATAGATGTTACTGGCACATTGATAGCTTACAAAGGCGAGCTAGGTGATTACTATTGCATGGCAGCCAAATCAGTGGGGCTACCATGCCCCGATTACAAACGTATGCATGAGGGTTTTAAATTAGCTTATAAGGAGATGGCAAAAAACTATCCATGTTTTGGATATGCAGCAAAAATGCCTAACATCGTTTGGTGGAAAACTTGCGTTAGAGATTCCTTTATCAGGGTAAGAGACAGATATAACCGTCTAGATATACGGGCATGGCATTTTGCAGTGAGTAGATTCACAAATATACTCATCAATGTTGATTTTGCATAGTCTATAGTCAACAGTATTAGATTAATGGCAATCACATTTGTTAGAATTTTCTGTCCACATTCTCTTTTGAAGGCATAGCCAGTCTGAGTCAAACCCTGTTATATTGTATGTGGAATGGGGAAACATACAACAACTGCTAGCTCAGAATTTAAAAACCCTTCAGACTAAGAATTTCCGAAATTTTTATGACGTGAAAAATCTTGTTTTACCAATAGGCTGGATATGATTATGACGAGGAGACATTTGACAAGGTGTTTAGACGTATATATGCATCCTTTGGTTCATCTGCTCCTTATAAGGTGTTCGAAGATTCCCAACCATTTCTTAGATGGGTGCGTCAGCAAGGCCTTATGGTTGGCATCGTGAGTAATGCAGAGTACCGGTACCAGGATGTGATCCTTCCAGCCTTAGGCTTGAATCAGGTATGTGTGAACTCATTATGCCCTTGTTCCCTTTTCTTTTTTGGGTATACTGTACATCTAGATTTTTGTCTTGTGATGAGGTGGAGACGACTTTTAAAATAGGTACTTTTAAGTGAAAATCTAAGCACTCTTGAAAATTTCATTAATAAGGTGCTTTGAAAAGTACTTTTTAAGTATTAATTTTCAATTTCACTGCTAGTTGCATTTAGAAGACAAATGATTTGATAGGGTAGATGTGAATGCAAATGGCCATTACTCGTTCCCATGGTTTAACAAAAGATCTTAGAATCCTTCCTTCTTCTGATATTAGAGTTTATTGTAGCACAATGAAAAGTGGCACTCTGTTTTGTTCAAGAGTGTTCTTCCTGATACACGAGCAAGTTCTGCTGACGGGTATTGTTCTTCGTGAGTGTTCAGGGATCAGAATGGGACTTCGGAGTATTCTCCGGTCTCGAGGGTGTGGAGAAACCAGATCCTAGAATCTACGAGATTGCGATCGAGAGGGCTGGAAATATAGCTCCAGAAGAAGCTCTCCACATTGGAGACAGTTTGCGAAAAGATTATATCCCTGCGAAGAGCGTGGGAATGCATGGTCTGCTATTGGATAGATTTGAGACATCAGATGCTGAGGAATGGAGGAAATCTGGGGCAGTGGTGCTTCCCGACCTGATGGCTGCCAAAGAGTGGCTTCAGAATAACTGATTTGCTAAGTTATCTGCTTCTCTTGTTATAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAANGTGTAATGTTAATTTACATAAGGATTTTACCTCAGTGAATCTGCTTGGAATCATGCATCTGTAAGTGGTTGAGTCCCAATTTCACGACTGGCTGCTGATTTTTGAAAGCTTTGCTGTTTTCAATAATAAATTTTTGAGGTATGAGTATTGAACCCAATCTAATTACAAAGTTAATTTCTTACAAGAATTAAACCCTCCTTGCTCCAGCTTTTCCTGTTGCTTGATTGAACAGCTATATGATAGTGAGTGAAGTTGGAGGGCCAAAGGTTAGTTAGATAAGACGGGGAAGTGTTTCAGATGCAGGGTTGTAAGGTGGACATAAACGCTATGAATGTAGGTGTAGCACGCACATGAATACAAGGCTGAATGGCTCGGAGGCTACAAAGATGGAGGGTGGGGTTTGAAAGAGTTTGAAGATGGGGCTTAAGTTAATGGTGAGGTTGTAGAGGTCGTCCTAACCAGGTTACTTTGTCATCACCATCATCAACCGCGTTACTTCATCCATCTCATCTAACACTTCCTGCTTCAACTAAAGCTTTAGATGGTTTGACCCAGAATTAGGATTAAGATTGCTTCGTTCAGTTTTTTATTTTCTTTGATTTAGTTTGCCTATTTTAA GTAAAAACACCAACATTTCATAAATTGATAGTTAGGTTAGATGGGTAAGATGGTAAATTCGGAGGAGGAAGGGGGAAGAAACGGAAATGGCGAACAGAAGTGGAGAGAATGTATATGCTGAGTTCGGCCATTGGTTTTGTCAAACTTTGGACGAAAGGTATGCAAAATTAAGCCCCCTCCCTTTTATTCCCATCCAACCTTTTCATCCCCCAACCCCCGTCATATATATACGCGTGTGCGTCTCTATTTCTCTCTCGCCTTCCCTTCTTGATCGTTGCTTCATCCAACGTCCTGCCCAAGCTTCCAGCTTCGGATGACATTTTGATTTACACCATTCATTTCAAAACATTCAATCCCTTTTGGCTTTCGGGATTTATTGGTTAATGCTGTAGTTGGCTGCTTGATGGAAGTCTGTTAGTTGGGTGCTTTCAGATAAATTTTCATTTGCTGCGATTGTTGATATCATTCACTTTGGAACTGCAACATTCTTCATTAAAATGTCGCTCTTGTCAAAGTTGCGCTGTATCACCATAGATGTTACTGGCACATTGATAGCTTACAAAGGCGAGCTAGGTGATTACTATTGCATGGCAGCCAAATCAGTGGGGCTACCATGCCCCGATTACAAACGTATGCATGAGGGTTTTAAATTAGCTTATAAGGAGATGGCAAAAAACTATCCATGTTTTGGATATGCAGCAAAAATGCCTAACATCGTTTGGTGGAAAACTTGCGTTAGAGATTCCTTTATCAGGGCTGGATATGATTATGACGAGGAGACATTTGACAAGGTGTTTAGACGTATATATGCATCCTTTGGTTCATCTGCTCCTTATAAGGTGTTCGAAGATTCCCAACCATTTCTTAGATGGGTGCGTCAGCAAGGCCTTATGGTTGGCATCGTGAGTAATGCAGAGTACCGGTACCAGGATGTGATCCTTCCAGCCTTAGGCTTGAATCAGGGATCAGAATGGGACTTCGGAGTATTCTCCGGTCTCGAGGGTGTGGAGAAACCAGATCCTAGAATCTACGAGATTGCGATCGAGAGGGCTGGAAATATAGCTCCAGAAGAAGCTCTCCACATTGGAGACAGTTTGCGAAAAGATTATATCCCTGCGAAGAGCGTGGGAATGCATGCTATATGATAGTGAGTGAAGTTGGAGGGCCAAAGGTTAGTTAGATAAGACGGGGAAGTGTTTCAGATGCAGGGTTGTAAGGTGGACATAAACGCTATGAATGTAGGTGTAGCACGCACATGAATACAAGGCTGAATGGCTCGGAGGCTACAAAGATGGAGGGTGGGGTTTGAAAGAGTTTGAAGATGGGGCTTAAGTTAATGGTGAGGTTGTAGAGGTCGTCCTAACCAGGTTACTTTGTCATCACCATCATCAACCGCGTTACTTCATCCATCTCATCTAACACTTCCTGCTTCAACTAAAGCTTTAGATGGTTTGACCCAGAATTAGGATTAAGATTGCTTCGTTCAGTTTTTTATTTTCTTTGATTTAGTTTGCCTATTTTAA ATGTCGCTCTTGTCAAAGTTGCGCTGTATCACCATAGATGTTACTGGCACATTGATAGCTTACAAAGGCGAGCTAGGTGATTACTATTGCATGGCAGCCAAATCAGTGGGGCTACCATGCCCCGATTACAAACGTATGCATGAGGGTTTTAAATTAGCTTATAAGGAGATGGCAAAAAACTATCCATGTTTTGGATATGCAGCAAAAATGCCTAACATCGTTTGGTGGAAAACTTGCGTTAGAGATTCCTTTATCAGGGCTGGATATGATTATGACGAGGAGACATTTGACAAGGTGTTTAGACGTATATATGCATCCTTTGGTTCATCTGCTCCTTATAAGGTGTTCGAAGATTCCCAACCATTTCTTAGATGGGTGCGTCAGCAAGGCCTTATGGTTGGCATCGTGAGTAATGCAGAGTACCGGTACCAGGATGTGATCCTTCCAGCCTTAGGCTTGAATCAGGGATCAGAATGGGACTTCGGAGTATTCTCCGGTCTCGAGGGTGTGGAGAAACCAGATCCTAGAATCTACGAGATTGCGATCGAGAGGGCTGGAAATATAGCTCCAGAAGAAGCTCTCCACATTGGAGACAGTTTGCGAAAAGATTATATCCCTGCGAAGAGCGTGGGAATGCATGCTATATGA MSLLSKLRCITIDVTGTLIAYKGELGDYYCMAAKSVGLPCPDYKRMHEGFKLAYKEMAKNYPCFGYAAKMPNIVWWKTCVRDSFIRAGYDYDEETFDKVFRRIYASFGSSAPYKVFEDSQPFLRWVRQQGLMVGIVSNAEYRYQDVILPALGLNQGSEWDFGVFSGLEGVEKPDPRIYEIAIERAGNIAPEEALHIGDSLRKDYIPAKSVGMHAI Homology
BLAST of Cp4.1LG10g06690 vs. ExPASy Swiss-Prot
Match: Q9CYW4 (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Mus musculus OX=10090 GN=Hdhd3 PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.0e-27 Identity = 71/209 (33.97%), Postives = 117/209 (55.98%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. ExPASy Swiss-Prot
Match: Q5E9D6 (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Bos taurus OX=9913 GN=HDHD3 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 4.5e-27 Identity = 70/209 (33.49%), Postives = 117/209 (55.98%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. ExPASy Swiss-Prot
Match: Q94915 (Rhythmically expressed gene 2 protein OS=Drosophila melanogaster OX=7227 GN=Reg-2 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.1e-20 Identity = 67/224 (29.91%), Postives = 109/224 (48.66%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. ExPASy Swiss-Prot
Match: Q5HZL9 (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis OX=8355 GN=hdhd3 PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.6e-19 Identity = 59/208 (28.37%), Postives = 103/208 (49.52%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. ExPASy Swiss-Prot
Match: Q08CY5 (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus tropicalis OX=8364 GN=hdhd3 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.7e-11 Identity = 40/139 (28.78%), Postives = 71/139 (51.08%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. NCBI nr
Match: XP_022977819.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita maxima]) HSP 1 Score: 446 bits (1146), Expect = 1.42e-157 Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. NCBI nr
Match: XP_022926076.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita moschata] >XP_023544714.1 haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita pepo subsp. pepo] >XP_023544715.1 haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita pepo subsp. pepo] >KAG6581523.1 Haloacid dehalogenase-like hydrolase domain-containing protein 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034816.1 Haloacid dehalogenase-like hydrolase domain-containing protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 446 bits (1146), Expect = 1.42e-157 Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. NCBI nr
Match: XP_038876374.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Benincasa hispida] >XP_038876375.1 haloacid dehalogenase-like hydrolase domain-containing protein 3 [Benincasa hispida] >XP_038876376.1 haloacid dehalogenase-like hydrolase domain-containing protein 3 [Benincasa hispida]) HSP 1 Score: 440 bits (1132), Expect = 1.94e-155 Identity = 208/215 (96.74%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. NCBI nr
Match: KAA0052427.1 (Haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 439 bits (1129), Expect = 5.55e-155 Identity = 206/215 (95.81%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. NCBI nr
Match: XP_031743322.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucumis sativus]) HSP 1 Score: 439 bits (1128), Expect = 7.88e-155 Identity = 207/215 (96.28%), Postives = 213/215 (99.07%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. ExPASy TrEMBL
Match: A0A6J1ISF9 (haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111478007 PE=4 SV=1) HSP 1 Score: 446 bits (1146), Expect = 6.88e-158 Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. ExPASy TrEMBL
Match: A0A6J1EDV5 (haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111433300 PE=4 SV=1) HSP 1 Score: 446 bits (1146), Expect = 6.88e-158 Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. ExPASy TrEMBL
Match: A0A5A7UD59 (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00220 PE=4 SV=1) HSP 1 Score: 439 bits (1129), Expect = 2.69e-155 Identity = 206/215 (95.81%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. ExPASy TrEMBL
Match: A0A0A0KJ36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G532590 PE=4 SV=1) HSP 1 Score: 437 bits (1125), Expect = 1.09e-154 Identity = 206/215 (95.81%), Postives = 213/215 (99.07%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. ExPASy TrEMBL
Match: A0A067GPK8 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g039449mg PE=4 SV=1) HSP 1 Score: 421 bits (1083), Expect = 3.19e-148 Identity = 192/215 (89.30%), Postives = 211/215 (98.14%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. TAIR 10
Match: AT5G44730.2 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 390.6 bits (1002), Expect = 8.3e-109 Identity = 171/216 (79.17%), Postives = 206/216 (95.37%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. TAIR 10
Match: AT5G44730.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 390.6 bits (1002), Expect = 8.3e-109 Identity = 171/216 (79.17%), Postives = 206/216 (95.37%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. TAIR 10
Match: AT1G14310.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 1.8e-07 Identity = 44/203 (21.67%), Postives = 87/203 (42.86%), Query Frame = 0
BLAST of Cp4.1LG10g06690 vs. TAIR 10
Match: AT2G41250.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 52.8 bits (125), Expect = 4.1e-07 Identity = 35/117 (29.91%), Postives = 58/117 (49.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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