Cp4.1LG10g03960 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g03960
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	cytochrome b-c1 complex subunit 9-like
Location	Cp4.1LG10: 1680291 .. 1682631 (-)
RNA-Seq Expression	Cp4.1LG10g03960
Synteny	Cp4.1LG10g03960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAAAAAAAGAAGAAACCGCGCGGTTCGATGTTTAGATGTTCGCTTGAATCGATCAATCAAATAACAGAAGAGAGTTCCCCCATCAATCGTCTCAACTTCAACAGCGTCGCTGGAGATCTGCGAAACCTAACTCGCACAGATCAGGAGGAAAGAAGTTCAGATTATCACGGCCATGGATCATGCTGCGCGTAGGAGTGGAGGAGGCCTCCTTGAAGGGCTTTACAGAGTAATTATGCGCCGGAATTCCGTTTATGTCACCTTCATTATCGCCGGCGCTTTCGCTGGAGAGCGGGTAAGGATCATAAATCATCTCTTTATTGTGCACTTGATTCATCTTTTTGGTTCCTTTAGTTACCTGTTTGCTGAGGGATAGAGAGAAGTGAGAAGAAAAATACAATGTCAGTGGGCAATAGACCGTATTACTATGTCAATTAGCGAGATTCGGATGTAGGAACCATTTCTAATTGTCGAAATGTTGAATTCTGAAATTAACTGGCTTATTAATGTTATCTTCGTTTTGTTAATTCGAACCGATAATCTCCATTGCTGAAAAGGAGAGGGAAAAAAAAAAGAGCAATTTCTTGGACGTTTTGGACAGAAGTTGCTTTCTGGAAGGAATTCGGTTTTTGATTTTGCGGCTGTGAAGAAATCTATGGACATGAAAGTTTCATATGGAACCTTGAAGATCTAATGATATGCTTGTTTATTTTCATGTAAATTCGTTCCCGCCAAATGATCTCTGTAGAGTTTTAGTGTGTTTTCTTTTGGATTATGCAATTGGCTTGCCAAACCTCCCGATACTAGGAGAATTCTTTCATTTGTTCTTCATAGTGCTCGTTAAATCTGAGGGGTGAAGTATTTCATCATTTTGGGGTGTGAAAATTTTGTCAACCGTTTTCACATTCATTCTTCTGTACCATTTGCTGGAACATGCATTCCATTACTTGCTACAAAATTATTTGGCGTTCCTTAGATTTATTCTTTAAAATTATTTTGGTTTTCTGGGTTGTGTAAGACTATGAACATCGGTATTAACTTCTTACTAGTTTTGGCTTTCCTGTTGTAGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAATACAACAATGTTGGGGTATGACATAACTATCCTTTGGTTTATTTTTTTTTTAATTTGAATTGTCTTTGCAACTGTTATGGAACTGAAGTCGAAAATCACTACCTCATTTATCATATCACATTAAACTTTAAGTTTGCTTTCTGAATGGGACCAATTTGTGAACCTTTTTTTTTTGTTTATTATGCTTATTTTTACTGAGAGTGGAATAAAATGTTCATAATTTTGTGTCAATTTTTTGTTTTTGAACATTCTATATGCAATATATGAACCAAAACTATAAAGATCACAATTTCATTGATGTTTTCAAAATGTTGAAACATTACTAAATATAAATGTTCTTTCAACTAGATAAATAAGAACAATGTACATAGTTAAGGGCTTAAGGGGATGAGTTTAACTATGGTGCCTTGGTGCCTTGATATACTACGAAGTATTTGGCAACTATATGTAGTAGGGTTAAGTGGTTTTTTTGCGAGAATAAATGTTTGTAAAATGATTGTCTTGTGGAAATAGTCGAGGTTCATGCAAGCTAGTGTGAACCTTCACCGATACTAAAAGGTCTGTCCATCAGTTTAAGTATTGTTTCCTCTCCACCCAGTTCAACTTACCCCTCTCGAGTTATTGGAGGTGTTTATTGGCATACATGAGGTCTGCAGAGTAGTGGCCAAATTTCTGAGATAGAACTTCAACCTGGAAACTTATTACTATAAGCAATGTTTGTGGCTGAGTATTAGCTTTGAATTTTGATTGTGTTACCCCTTTTGCTGCAGAAACGGTACGACGACATTTCGGTTTTGGGGCAAAGACAATCAGAAGAATGATAGTTGCCTCGATGATTCGGTTCTCACCATTTCTTTGTTTATAACAATAGCCATCTGATTAATTTTTTTGAAATAAGTTTTAGATGTCGGATTGTGGACACCTTATATATTGACTCTTGAGCTTGGTGGTCTCTTTCGATGTCGTTTCTCATTATTCATGTTCATCTATGAAATTACTAATGAAATGTTCTTCTTTTATCCGGCTAGATTATTACATAGCAAATCTAGTGGGTCTAGACTTATAAAAGCACCGTTTAAAATTGTATGATTATAAGGATATCTCGATATGGAGTTGGATCATCGGACTTGGTGGTGGCACCTCTTACTAGTAAAGGGAATTGGACGGGATGATATTGGTGCTACTAGTTACGCTCTTGTTATCATAGACAAGTATGCTTATTCTTTCCT

mRNA sequence

AAAAAAAAAAAAAAAAAAAAAGAAGAAACCGCGCGGTTCGATGTTTAGATGTTCGCTTGAATCGATCAATCAAATAACAGAAGAGAGTTCCCCCATCAATCGTCTCAACTTCAACAGCGTCGCTGGAGATCTGCGAAACCTAACTCGCACAGATCAGGAGGAAAGAAGTTCAGATTATCACGGCCATGGATCATGCTGCGCGTAGGAGTGGAGGAGGCCTCCTTGAAGGGCTTTACAGAGTAATTATGCGCCGGAATTCCGTTTATGTCACCTTCATTATCGCCGGCGCTTTCGCTGGAGAGCGGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAATACAACAATGTTGGGAAACGGTACGACGACATTTCGGTTTTGGGGCAAAGACAATCAGAAGAATGATAGTTGCCTCGATGATTCGGTTCTCACCATTTCTTTGTTTATAACAATAGCCATCTGATTAATTTTTTTGAAATAAGTTTTAGATGTCGGATTGTGGACACCTTATATATTGACTCTTGAGCTTGGTGGTCTCTTTCGATGTCGTTTCTCATTATTCATGTTCATCTATGAAATTACTAATGAAATGTTCTTCTTTTATCCGGCTAGATTATTACATAGCAAATCTAGTGGGTCTAGACTTATAAAAGCACCGTTTAAAATTGTATGATTATAAGGATATCTCGATATGGAGTTGGATCATCGGACTTGGTGGTGGCACCTCTTACTAGTAAAGGGAATTGGACGGGATGATATTGGTGCTACTAGTTACGCTCTTGTTATCATAGACAAGTATGCTTATTCTTTCCT

Coding sequence (CDS)

ATGGATCATGCTGCGCGTAGGAGTGGAGGAGGCCTCCTTGAAGGGCTTTACAGAGTAATTATGCGCCGGAATTCCGTTTATGTCACCTTCATTATCGCCGGCGCTTTCGCTGGAGAGCGGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAATACAACAATGTTGGGAAACGGTACGACGACATTTCGGTTTTGGGGCAAAGACAATCAGAAGAATGA

Protein sequence

MDHAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYDDISVLGQRQSEE

Homology

[Close]

BLAST of Cp4.1LG10g03960 vs. ExPASy Swiss-Prot
Match: Q9LXJ2 (Cytochrome b-c1 complex subunit 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=QCR9 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.9e-26
Identity = 57/72 (79.17%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 1  MDHAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60
          M++AARR+  G  EG Y++IMRRNSVYVTFIIAGAF GERAVDYGVHKLWE NNVGKRY+
Sbjct: 1  MEYAARRNQKGAFEGFYKLIMRRNSVYVTFIIAGAFFGERAVDYGVHKLWERNNVGKRYE 60

Query: 61 DISVLGQRQSEE 73
          DISVLGQR  EE
Sbjct: 61 DISVLGQRPVEE 72

[Close]

BLAST of Cp4.1LG10g03960 vs. ExPASy Swiss-Prot
Match: P46270 (Cytochrome b-c1 complex subunit 9 OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 5.4e-25
Identity = 54/72 (75.00%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 1  MDHAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60
          M+ AARRSGGG+LEG YR++MRR  VYVTF+IAGA  GERAVDYGV  LWE NNVGKRY+
Sbjct: 1  MESAARRSGGGVLEGFYRLVMRRTPVYVTFVIAGALLGERAVDYGVKTLWEKNNVGKRYE 60

Query: 61 DISVLGQRQSEE 73
          DISVLGQR  +E
Sbjct: 61 DISVLGQRPVDE 72

[Close]

BLAST of Cp4.1LG10g03960 vs. ExPASy Swiss-Prot
Match: Q7SGT7 (Cytochrome b-c1 complex subunit 9, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=qcr9 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 8.1e-05
Identity = 21/50 (42.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 13 LEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYDDI 63
          +  LY +I R N+ +V  + AGAFA E A D G+ K+W+  N G+++ DI
Sbjct: 1  MSALYNLIFRNNTAFVGAVFAGAFAFELAYDNGMDKVWDKINKGRQWKDI 50

[Close]

BLAST of Cp4.1LG10g03960 vs. NCBI nr
Match: XP_023543185.1 (cytochrome b-c1 complex subunit 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151 bits (381), Expect = 4.61e-46
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MDHAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60
          MDHAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD
Sbjct: 1  MDHAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60

Query: 61 DISVLGQRQSEE 72
          DISVLGQRQSEE
Sbjct: 61 DISVLGQRQSEE 72

[Close]

BLAST of Cp4.1LG10g03960 vs. NCBI nr
Match: KAG7034498.1 (hypothetical protein SDJN02_04228, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149 bits (375), Expect = 3.80e-45
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MDHAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60
          MD+AARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD
Sbjct: 1  MDYAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60

Query: 61 DISVLGQRQSEE 72
          DISVLGQRQSEE
Sbjct: 61 DISVLGQRQSEE 72

[Close]

BLAST of Cp4.1LG10g03960 vs. NCBI nr
Match: XP_022925598.1 (cytochrome b-c1 complex subunit 9-like [Cucurbita moschata])

HSP 1 Score: 147 bits (371), Expect = 1.55e-44
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 1  MDHAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60
          MD+ ARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD
Sbjct: 1  MDYTARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60

Query: 61 DISVLGQRQSEE 72
          DISVLGQRQSEE
Sbjct: 61 DISVLGQRQSEE 72

[Close]

BLAST of Cp4.1LG10g03960 vs. NCBI nr
Match: XP_022977446.1 (cytochrome b-c1 complex subunit 9-like [Cucurbita maxima])

HSP 1 Score: 145 bits (366), Expect = 8.98e-44
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 1  MDHAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60
          MD+AARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRY 
Sbjct: 1  MDYAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYY 60

Query: 61 DISVLGQRQSEE 72
          DISVLGQRQSEE
Sbjct: 61 DISVLGQRQSEE 72

[Close]

BLAST of Cp4.1LG10g03960 vs. NCBI nr
Match: XP_038881020.1 (cytochrome b-c1 complex subunit 9-like isoform X3 [Benincasa hispida])

HSP 1 Score: 142 bits (358), Expect = 1.49e-42
Identity = 68/72 (94.44%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 1  MDHAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60
          MD AARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAF GERAVDYGVHKLWEYNNVGKRY+
Sbjct: 1  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERAVDYGVHKLWEYNNVGKRYE 60

Query: 61 DISVLGQRQSEE 72
          DISVLGQR SEE
Sbjct: 61 DISVLGQRPSEE 72

[Close]

BLAST of Cp4.1LG10g03960 vs. ExPASy TrEMBL
Match: A0A6J1EFN3 (cytochrome b-c1 complex subunit 9-like OS=Cucurbita moschata OX=3662 GN=LOC111432985 PE=3 SV=1)

HSP 1 Score: 147 bits (371), Expect = 7.50e-45
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 1  MDHAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60
          MD+ ARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD
Sbjct: 1  MDYTARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60

Query: 61 DISVLGQRQSEE 72
          DISVLGQRQSEE
Sbjct: 61 DISVLGQRQSEE 72

[Close]

BLAST of Cp4.1LG10g03960 vs. ExPASy TrEMBL
Match: A0A6J1IJX8 (cytochrome b-c1 complex subunit 9-like OS=Cucurbita maxima OX=3661 GN=LOC111477790 PE=3 SV=1)

HSP 1 Score: 145 bits (366), Expect = 4.35e-44
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 1  MDHAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60
          MD+AARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRY 
Sbjct: 1  MDYAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYY 60

Query: 61 DISVLGQRQSEE 72
          DISVLGQRQSEE
Sbjct: 61 DISVLGQRQSEE 72

[Close]

BLAST of Cp4.1LG10g03960 vs. ExPASy TrEMBL
Match: A0A6J1BSW3 (cytochrome b-c1 complex subunit 9-like OS=Momordica charantia OX=3673 GN=LOC111005248 PE=3 SV=1)

HSP 1 Score: 140 bits (354), Expect = 2.95e-42
Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 1  MDHAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60
          MD AARR GGGLLEGLYRVIMRRNSVYVTFIIAGAF GERAVDYGVHKLWEYNNVGKRY+
Sbjct: 1  MDSAARRGGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERAVDYGVHKLWEYNNVGKRYE 60

Query: 61 DISVLGQRQSEE 72
          DISVLGQR SEE
Sbjct: 61 DISVLGQRPSEE 72

[Close]

BLAST of Cp4.1LG10g03960 vs. ExPASy TrEMBL
Match: A0A6J1I6G5 (cytochrome b-c1 complex subunit 9-like OS=Cucurbita maxima OX=3661 GN=LOC111471161 PE=3 SV=1)

HSP 1 Score: 140 bits (353), Expect = 4.20e-42
Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 1  MDHAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60
          MD AARRSGGGL EGLYRVIMRRNSVYVTFIIAGAF GERAVDYGVHKLWEYNNVGKRY+
Sbjct: 1  MDSAARRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYE 60

Query: 61 DISVLGQRQSEE 72
          DISVLGQR SEE
Sbjct: 61 DISVLGQRPSEE 72

[Close]

BLAST of Cp4.1LG10g03960 vs. ExPASy TrEMBL
Match: A0A6P4ALE1 (cytochrome b-c1 complex subunit 9 OS=Ziziphus jujuba OX=326968 GN=LOC107432191 PE=3 SV=1)

HSP 1 Score: 140 bits (352), Expect = 5.96e-42
Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 1  MDHAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60
          MD AARRSGGGL EGLYRVIMRRNSVYVTFIIAGAF GERAVDYGVHK+WEYNNVGKRY+
Sbjct: 1  MDSAARRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKIWEYNNVGKRYE 60

Query: 61 DISVLGQRQSEE 72
          DI VLGQRQSEE
Sbjct: 61 DIPVLGQRQSEE 72

[Close]

BLAST of Cp4.1LG10g03960 vs. TAIR 10
Match: AT3G52730.1 (ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein )

HSP 1 Score: 118.6 bits (296), Expect = 2.0e-27
Identity = 57/72 (79.17%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 1  MDHAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYD 60
          M++AARR+  G  EG Y++IMRRNSVYVTFIIAGAF GERAVDYGVHKLWE NNVGKRY+
Sbjct: 1  MEYAARRNQKGAFEGFYKLIMRRNSVYVTFIIAGAFFGERAVDYGVHKLWERNNVGKRYE 60

Query: 61 DISVLGQRQSEE 73
          DISVLGQR  EE
Sbjct: 61 DISVLGQRPVEE 72

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g03960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXJ2	2.9e-26	79.17	Cytochrome b-c1 complex subunit 9, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
P46270	5.4e-25	75.00	Cytochrome b-c1 complex subunit 9 OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q7SGT7	8.1e-05	42.00	Cytochrome b-c1 complex subunit 9, mitochondrial OS=Neurospora crassa (strain AT...	[more]

BLAST of Cp4.1LG10g03960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543185.1	4.61e-46	100.00	cytochrome b-c1 complex subunit 9-like [Cucurbita pepo subsp. pepo]	[more]
KAG7034498.1	3.80e-45	98.61	hypothetical protein SDJN02_04228, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022925598.1	1.55e-44	97.22	cytochrome b-c1 complex subunit 9-like [Cucurbita moschata]	[more]
XP_022977446.1	8.98e-44	97.22	cytochrome b-c1 complex subunit 9-like [Cucurbita maxima]	[more]
XP_038881020.1	1.49e-42	94.44	cytochrome b-c1 complex subunit 9-like isoform X3 [Benincasa hispida]	[more]

BLAST of Cp4.1LG10g03960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EFN3	7.50e-45	97.22	cytochrome b-c1 complex subunit 9-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1IJX8	4.35e-44	97.22	cytochrome b-c1 complex subunit 9-like OS=Cucurbita maxima OX=3661 GN=LOC1114777...	[more]
A0A6J1BSW3	2.95e-42	93.06	cytochrome b-c1 complex subunit 9-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1I6G5	4.20e-42	93.06	cytochrome b-c1 complex subunit 9-like OS=Cucurbita maxima OX=3661 GN=LOC1114711...	[more]
A0A6P4ALE1	5.96e-42	91.67	cytochrome b-c1 complex subunit 9 OS=Ziziphus jujuba OX=326968 GN=LOC107432191 P...	[more]

BLAST of Cp4.1LG10g03960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52730.1	2.0e-27	79.17	ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036656	Cytochrome b-c1 complex subunit 9 superfamily	GENE3D	1.20.5.260		coord: 10..64 e-value: 5.0E-25 score: 89.0
IPR036656	Cytochrome b-c1 complex subunit 9 superfamily	SUPERFAMILY	81514	Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	coord: 12..62
IPR008027	Cytochrome b-c1 complex subunit 9	PFAM	PF05365	UCR_UQCRX_QCR9	coord: 15..63 e-value: 4.2E-22 score: 77.8
IPR008027	Cytochrome b-c1 complex subunit 9	PANTHER	PTHR12980	UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX, SUBUNIT X	coord: 1..72
None	No IPR available	PANTHER	PTHR12980:SF4	CYTOCHROME B-C1 COMPLEX SUBUNIT 9-LIKE	coord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g03960.1	Cp4.1LG10g03960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c
cellular_component	GO:0005750	mitochondrial respiratory chain complex III