Cp4.1LG10g02610 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g02610
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Remorin_C domain-containing protein
Location	Cp4.1LG10: 2554229 .. 2555793 (+)
RNA-Seq Expression	Cp4.1LG10g02610
Synteny	Cp4.1LG10g02610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAAAGCATTGGCGGAGGCAGAGAACAAAAAACAAATCTTTCTCTCCATCAATTCAATCTTTTCCACTTTTTTTAGATTTTACCCCCACACAAAAGAAAAAAGAAATGAACTTTATCTTCTTAAAACTGTAAACTAACACAAAATTGCTATAAAACAAATTGTTGATTGAAACTAAACGTTGGAAATGTACCCATCTCTTCAACTTACCCAAAGCTTTAACACCATTCATCCATCAATCCCTCAGGCATAGATGTACGACAAAGCAAGAAAAAGTTTAACTCCGAATTGGTTGAAGTGCTTTGCAGGATTCCCATCATTCTGGATGCCAAGTTCCTCCACTTTCAGGCAAACTAGTTTCTCATAAATCTGATGTGATTCCGAATGTGGCCGTGTCCTTCCTTCCTTCCTTCTTGCTAATTCACTCCAATTTATAGCAACCCAAGGGAAGCTAGATCGCTGCGCTGCAACCTCCTGGCCTGGCCTCCCGTCAAAACGAAGTTTCCAGATAACCCCCAGAACGCAGGTATATTCCACAAAAAGTGGACGGAAGAATAGTGTTGAAAGCGGAATTCTATCGATAGAGACGCAGAGACCCTTGTTACTCTTTACTGTTACTGTGTTGTACTGTTCACAATGAAGGAAAGAATTTGCAGTTCTTCCTACAATTTCAGTGCGTTTCCAAGTCCTGGTGTTCCAAATTACTGGGAAATCAATGTAATGAACCAAAGGGGTTGTAGCTCCGAGCGAATACCTCATCCTAATAGCAACACCCGGCGGAGGAATGCCTCTGTCGCTGCCTTCTCACCCTTTTACGGTAGGACGCCGCCCTCCAAATGGGAGGATGCTGAGCGATGGATTAGTAGCCCGGGAAGCGGCTTCGGCAGGGGTTTGCAGTCTCACCTACAGAGAAGACCAAAGGGATCGTCAGAAGTTTGTATTACGACACCCCCCGAGAACAGGGGTTTTGCCACCTCCAAACTGGGCTCTGCTCTTTCCACTGGCGTGTTGGTGGCTGATGGGATTTCTATCTGCTATGGCGGTAGCATTGAAAGGGGACAATCTTATCCAGAGTGTACCATCCAACCATTAATTTCCGCACCCAGATGGTCAAATATACTGAACAACTCGCCACTGCCAAGCTTTCAAGGTATCTCTTTCTTCTCCCTGTATTATCATACAGTTGTTTTGAGTTGGAGATTGGTGGTTCTTAACATGTTCTTTGTGGCTCTGTTATCATAACCTAACCCCAGATGAAAAACATGATGGTTCCGAGGAGACAATGGATTCGGGCGTCGTTTCACAACGGAATGTGGCAACCCAAATGAGCGGTGGTGAAGATTCCACACCTTCATCTCCTCGGGGGAATGCCTCACTTCCCTCTTCATCTCCTTCAATACACCAATGTATGGTTGGAAAAGAGAGCGAGCATTGTTGTAAACAAGAAGTGAGAGATGTTGAGGTAGACAGGGGAGCCACGGAGATGCAGAGATCCAAAGGGGAGGACTTCCCACACCTTGGAAACAGGAATGAAAATGCTACGGGAGCTATTCAGGTTTCCAAGTAG

mRNA sequence

CGAAAGCATTGGCGGAGGCAGAGAACAAAAAACAAATCTTTCTCTCCATCAATTCAATCTTTTCCACTTTTTTTAGATTTTACCCCCACACAAAAGAAAAAAGAAATGAACTTTATCTTCTTAAAACTGTAAACTAACACAAAATTGCTATAAAACAAATTGTTGATTGAAACTAAACGTTGGAAATGTACCCATCTCTTCAACTTACCCAAAGCTTTAACACCATTCATCCATCAATCCCTCAGGCATAGATGTACGACAAAGCAAGAAAAAGTTTAACTCCGAATTGGTTGAAGTGCTTTGCAGGATTCCCATCATTCTGGATGCCAAGTTCCTCCACTTTCAGGCAAACTAGTTTCTCATAAATCTGATGTGATTCCGAATGTGGCCGTGTCCTTCCTTCCTTCCTTCTTGCTAATTCACTCCAATTTATAGCAACCCAAGGGAAGCTAGATCGCTGCGCTGCAACCTCCTGGCCTGGCCTCCCGTCAAAACGAAGTTTCCAGATAACCCCCAGAACGCAGGTATATTCCACAAAAAGTGGACGGAAGAATAGTGTTGAAAGCGGAATTCTATCGATAGAGACGCAGAGACCCTTGTTACTCTTTACTGTTACTGTGTTGTACTGTTCACAATGAAGGAAAGAATTTGCAGTTCTTCCTACAATTTCAGTGCGTTTCCAAGTCCTGGTGTTCCAAATTACTGGGAAATCAATGTAATGAACCAAAGGGGTTGTAGCTCCGAGCGAATACCTCATCCTAATAGCAACACCCGGCGGAGGAATGCCTCTGTCGCTGCCTTCTCACCCTTTTACGGTAGGACGCCGCCCTCCAAATGGGAGGATGCTGAGCGATGGATTAGTAGCCCGGGAAGCGGCTTCGGCAGGGGTTTGCAGTCTCACCTACAGAGAAGACCAAAGGGATCGTCAGAAGTTTGTATTACGACACCCCCCGAGAACAGGGGTTTTGCCACCTCCAAACTGGGCTCTGCTCTTTCCACTGGCGTGTTGGTGGCTGATGGGATTTCTATCTGCTATGGCGGTAGCATTGAAAGGGGACAATCTTATCCAGAGTGTACCATCCAACCATTAATTTCCGCACCCAGATGGTCAAATATACTGAACAACTCGCCACTGCCAAGCTTTCAAGATGAAAAACATGATGGTTCCGAGGAGACAATGGATTCGGGCGTCGTTTCACAACGGAATGTGGCAACCCAAATGAGCGGTGGTGAAGATTCCACACCTTCATCTCCTCGGGGGAATGCCTCACTTCCCTCTTCATCTCCTTCAATACACCAATGTATGGTTGGAAAAGAGAGCGAGCATTGTTGTAAACAAGAAGTGAGAGATGTTGAGGTAGACAGGGGAGCCACGGAGATGCAGAGATCCAAAGGGGAGGACTTCCCACACCTTGGAAACAGGAATGAAAATGCTACGGGAGCTATTCAGGTTTCCAAGTAG

Coding sequence (CDS)

ATGAAGGAAAGAATTTGCAGTTCTTCCTACAATTTCAGTGCGTTTCCAAGTCCTGGTGTTCCAAATTACTGGGAAATCAATGTAATGAACCAAAGGGGTTGTAGCTCCGAGCGAATACCTCATCCTAATAGCAACACCCGGCGGAGGAATGCCTCTGTCGCTGCCTTCTCACCCTTTTACGGTAGGACGCCGCCCTCCAAATGGGAGGATGCTGAGCGATGGATTAGTAGCCCGGGAAGCGGCTTCGGCAGGGGTTTGCAGTCTCACCTACAGAGAAGACCAAAGGGATCGTCAGAAGTTTGTATTACGACACCCCCCGAGAACAGGGGTTTTGCCACCTCCAAACTGGGCTCTGCTCTTTCCACTGGCGTGTTGGTGGCTGATGGGATTTCTATCTGCTATGGCGGTAGCATTGAAAGGGGACAATCTTATCCAGAGTGTACCATCCAACCATTAATTTCCGCACCCAGATGGTCAAATATACTGAACAACTCGCCACTGCCAAGCTTTCAAGATGAAAAACATGATGGTTCCGAGGAGACAATGGATTCGGGCGTCGTTTCACAACGGAATGTGGCAACCCAAATGAGCGGTGGTGAAGATTCCACACCTTCATCTCCTCGGGGGAATGCCTCACTTCCCTCTTCATCTCCTTCAATACACCAATGTATGGTTGGAAAAGAGAGCGAGCATTGTTGTAAACAAGAAGTGAGAGATGTTGAGGTAGACAGGGGAGCCACGGAGATGCAGAGATCCAAAGGGGAGGACTTCCCACACCTTGGAAACAGGAATGAAAATGCTACGGGAGCTATTCAGGTTTCCAAGTAG

Protein sequence

MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFYGRTPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSEVCITTPPENRGFATSKLGSALSTGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNNSPLPSFQDEKHDGSEETMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVRDVEVDRGATEMQRSKGEDFPHLGNRNENATGAIQVSK

Homology

[Close]

BLAST of Cp4.1LG10g02610 vs. NCBI nr
Match: XP_023543975.1 (uncharacterized protein LOC111803686 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 566 bits (1460), Expect = 7.02e-203
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60
           MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY
Sbjct: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60

Query: 61  GRTPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSEVCITTPPENRGFATSKLGSAL 120
           GRTPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSEVCITTPPENRGFATSKLGSAL
Sbjct: 61  GRTPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSEVCITTPPENRGFATSKLGSAL 120

Query: 121 STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNNSPLPSFQDEKHDGSEE 180
           STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNNSPLPSFQDEKHDGSEE
Sbjct: 121 STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNNSPLPSFQDEKHDGSEE 180

Query: 181 TMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV 240
           TMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV
Sbjct: 181 TMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV 240

Query: 241 EVDRGATEMQRSKGEDFPHLGNRNENATGAIQVSK 275
           EVDRGATEMQRSKGEDFPHLGNRNENATGAIQVSK
Sbjct: 241 EVDRGATEMQRSKGEDFPHLGNRNENATGAIQVSK 275

[Close]

BLAST of Cp4.1LG10g02610 vs. NCBI nr
Match: XP_023543974.1 (uncharacterized protein LOC111803686 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 566 bits (1460), Expect = 1.31e-202
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60
           MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY
Sbjct: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60

Query: 61  GRTPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSEVCITTPPENRGFATSKLGSAL 120
           GRTPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSEVCITTPPENRGFATSKLGSAL
Sbjct: 61  GRTPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSEVCITTPPENRGFATSKLGSAL 120

Query: 121 STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNNSPLPSFQDEKHDGSEE 180
           STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNNSPLPSFQDEKHDGSEE
Sbjct: 121 STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNNSPLPSFQDEKHDGSEE 180

Query: 181 TMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV 240
           TMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV
Sbjct: 181 TMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV 240

Query: 241 EVDRGATEMQRSKGEDFPHLGNRNENATGAIQVSK 275
           EVDRGATEMQRSKGEDFPHLGNRNENATGAIQVSK
Sbjct: 241 EVDRGATEMQRSKGEDFPHLGNRNENATGAIQVSK 275

[Close]

BLAST of Cp4.1LG10g02610 vs. NCBI nr
Match: XP_023543973.1 (uncharacterized protein LOC111803686 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 566 bits (1460), Expect = 2.10e-202
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60
           MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY
Sbjct: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60

Query: 61  GRTPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSEVCITTPPENRGFATSKLGSAL 120
           GRTPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSEVCITTPPENRGFATSKLGSAL
Sbjct: 61  GRTPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSEVCITTPPENRGFATSKLGSAL 120

Query: 121 STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNNSPLPSFQDEKHDGSEE 180
           STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNNSPLPSFQDEKHDGSEE
Sbjct: 121 STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNNSPLPSFQDEKHDGSEE 180

Query: 181 TMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV 240
           TMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV
Sbjct: 181 TMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV 240

Query: 241 EVDRGATEMQRSKGEDFPHLGNRNENATGAIQVSK 275
           EVDRGATEMQRSKGEDFPHLGNRNENATGAIQVSK
Sbjct: 241 EVDRGATEMQRSKGEDFPHLGNRNENATGAIQVSK 275

[Close]

BLAST of Cp4.1LG10g02610 vs. NCBI nr
Match: XP_022949719.1 (uncharacterized protein LOC111453030 isoform X2 [Cucurbita moschata])

HSP 1 Score: 548 bits (1411), Expect = 4.11e-195
Identity = 264/275 (96.00%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60
           MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY
Sbjct: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60

Query: 61  GRTPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSEVCITTPPENRGFATSKLGSAL 120
           GR PPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSE+CITTPPENRGFATSKLGSAL
Sbjct: 61  GRMPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSELCITTPPENRGFATSKLGSAL 120

Query: 121 STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNNSPLPSFQDEKHDGSEE 180
           STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSN+LNNSPLPSFQDEK+DGSE+
Sbjct: 121 STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNLLNNSPLPSFQDEKYDGSEK 180

Query: 181 TMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV 240
           TMDSGVVSQRNVATQMSG E+STPSSP+GNASLPSSSPSIHQCMVGKESEHCCKQEVRDV
Sbjct: 181 TMDSGVVSQRNVATQMSGVEESTPSSPQGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV 240

Query: 241 EVDRGATEMQRSKGEDFPHLGNRNENATGAIQVSK 275
           EVDRGATEMQRSKG++FPHLGNRNENATGA+QVSK
Sbjct: 241 EVDRGATEMQRSKGDNFPHLGNRNENATGAMQVSK 275

[Close]

BLAST of Cp4.1LG10g02610 vs. NCBI nr
Match: XP_022949718.1 (uncharacterized protein LOC111453030 isoform X1 [Cucurbita moschata])

HSP 1 Score: 548 bits (1411), Expect = 6.59e-195
Identity = 264/275 (96.00%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60
           MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY
Sbjct: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60

Query: 61  GRTPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSEVCITTPPENRGFATSKLGSAL 120
           GR PPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSE+CITTPPENRGFATSKLGSAL
Sbjct: 61  GRMPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSELCITTPPENRGFATSKLGSAL 120

Query: 121 STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNNSPLPSFQDEKHDGSEE 180
           STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSN+LNNSPLPSFQDEK+DGSE+
Sbjct: 121 STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNLLNNSPLPSFQDEKYDGSEK 180

Query: 181 TMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV 240
           TMDSGVVSQRNVATQMSG E+STPSSP+GNASLPSSSPSIHQCMVGKESEHCCKQEVRDV
Sbjct: 181 TMDSGVVSQRNVATQMSGVEESTPSSPQGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV 240

Query: 241 EVDRGATEMQRSKGEDFPHLGNRNENATGAIQVSK 275
           EVDRGATEMQRSKG++FPHLGNRNENATGA+QVSK
Sbjct: 241 EVDRGATEMQRSKGDNFPHLGNRNENATGAMQVSK 275

[Close]

BLAST of Cp4.1LG10g02610 vs. ExPASy TrEMBL
Match: A0A6J1GDN8 (uncharacterized protein LOC111453030 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453030 PE=3 SV=1)

HSP 1 Score: 548 bits (1411), Expect = 1.99e-195
Identity = 264/275 (96.00%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60
           MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY
Sbjct: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60

Query: 61  GRTPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSEVCITTPPENRGFATSKLGSAL 120
           GR PPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSE+CITTPPENRGFATSKLGSAL
Sbjct: 61  GRMPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSELCITTPPENRGFATSKLGSAL 120

Query: 121 STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNNSPLPSFQDEKHDGSEE 180
           STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSN+LNNSPLPSFQDEK+DGSE+
Sbjct: 121 STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNLLNNSPLPSFQDEKYDGSEK 180

Query: 181 TMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV 240
           TMDSGVVSQRNVATQMSG E+STPSSP+GNASLPSSSPSIHQCMVGKESEHCCKQEVRDV
Sbjct: 181 TMDSGVVSQRNVATQMSGVEESTPSSPQGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV 240

Query: 241 EVDRGATEMQRSKGEDFPHLGNRNENATGAIQVSK 275
           EVDRGATEMQRSKG++FPHLGNRNENATGA+QVSK
Sbjct: 241 EVDRGATEMQRSKGDNFPHLGNRNENATGAMQVSK 275

[Close]

BLAST of Cp4.1LG10g02610 vs. ExPASy TrEMBL
Match: A0A6J1GCU9 (uncharacterized protein LOC111453030 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453030 PE=3 SV=1)

HSP 1 Score: 548 bits (1411), Expect = 3.19e-195
Identity = 264/275 (96.00%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60
           MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY
Sbjct: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60

Query: 61  GRTPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSEVCITTPPENRGFATSKLGSAL 120
           GR PPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSE+CITTPPENRGFATSKLGSAL
Sbjct: 61  GRMPPSKWEDAERWISSPGSGFGRGLQSHLQRRPKGSSELCITTPPENRGFATSKLGSAL 120

Query: 121 STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNNSPLPSFQDEKHDGSEE 180
           STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSN+LNNSPLPSFQDEK+DGSE+
Sbjct: 121 STGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNLLNNSPLPSFQDEKYDGSEK 180

Query: 181 TMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV 240
           TMDSGVVSQRNVATQMSG E+STPSSP+GNASLPSSSPSIHQCMVGKESEHCCKQEVRDV
Sbjct: 181 TMDSGVVSQRNVATQMSGVEESTPSSPQGNASLPSSSPSIHQCMVGKESEHCCKQEVRDV 240

Query: 241 EVDRGATEMQRSKGEDFPHLGNRNENATGAIQVSK 275
           EVDRGATEMQRSKG++FPHLGNRNENATGA+QVSK
Sbjct: 241 EVDRGATEMQRSKGDNFPHLGNRNENATGAMQVSK 275

[Close]

BLAST of Cp4.1LG10g02610 vs. ExPASy TrEMBL
Match: A0A6J1IUN1 (uncharacterized protein LOC111478728 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478728 PE=4 SV=1)

HSP 1 Score: 536 bits (1380), Expect = 9.07e-191
Identity = 262/277 (94.58%), Postives = 266/277 (96.03%), Query Frame = 0


Query: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60
           MKERICSSSYNFSAFPSPGV NYWEINVMNQRGCSSERIPHPNSNTRRRNASV AFSPFY
Sbjct: 1   MKERICSSSYNFSAFPSPGVSNYWEINVMNQRGCSSERIPHPNSNTRRRNASVVAFSPFY 60

Query: 61  GRTPPSKWEDAERWISSP--GSGFGRGLQSHLQRRPKGSSEVCITTPPENRGFATSKLGS 120
           GRTPPSKWEDAERWISSP  GSGF R  QSHLQRRPKGSSEVCI TPPENRGFATSKLGS
Sbjct: 61  GRTPPSKWEDAERWISSPVMGSGFSRSFQSHLQRRPKGSSEVCIMTPPENRGFATSKLGS 120

Query: 121 ALSTGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNNSPLPSFQDEKHDGS 180
           ALSTGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSN+LNNSPLPSFQDEKHDGS
Sbjct: 121 ALSTGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNLLNNSPLPSFQDEKHDGS 180

Query: 181 EETMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVR 240
           EETMDSGVV++RNVATQMSGGEDSTPSSP+GNASLPSSSPSIHQCMVGKE EHCCKQEVR
Sbjct: 181 EETMDSGVVTRRNVATQMSGGEDSTPSSPQGNASLPSSSPSIHQCMVGKEREHCCKQEVR 240

Query: 241 DVEVDRGATEMQRSKGEDFPHLGNRNENATGAIQVSK 275
            VEVDRGATEMQRSKGEDFPHLGN NENATGAIQVSK
Sbjct: 241 VVEVDRGATEMQRSKGEDFPHLGNMNENATGAIQVSK 277

[Close]

BLAST of Cp4.1LG10g02610 vs. ExPASy TrEMBL
Match: A0A6J1IMD9 (uncharacterized protein LOC111478728 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478728 PE=3 SV=1)

HSP 1 Score: 536 bits (1380), Expect = 1.45e-190
Identity = 262/277 (94.58%), Postives = 266/277 (96.03%), Query Frame = 0


Query: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60
           MKERICSSSYNFSAFPSPGV NYWEINVMNQRGCSSERIPHPNSNTRRRNASV AFSPFY
Sbjct: 1   MKERICSSSYNFSAFPSPGVSNYWEINVMNQRGCSSERIPHPNSNTRRRNASVVAFSPFY 60

Query: 61  GRTPPSKWEDAERWISSP--GSGFGRGLQSHLQRRPKGSSEVCITTPPENRGFATSKLGS 120
           GRTPPSKWEDAERWISSP  GSGF R  QSHLQRRPKGSSEVCI TPPENRGFATSKLGS
Sbjct: 61  GRTPPSKWEDAERWISSPVMGSGFSRSFQSHLQRRPKGSSEVCIMTPPENRGFATSKLGS 120

Query: 121 ALSTGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNNSPLPSFQDEKHDGS 180
           ALSTGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSN+LNNSPLPSFQDEKHDGS
Sbjct: 121 ALSTGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNLLNNSPLPSFQDEKHDGS 180

Query: 181 EETMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVR 240
           EETMDSGVV++RNVATQMSGGEDSTPSSP+GNASLPSSSPSIHQCMVGKE EHCCKQEVR
Sbjct: 181 EETMDSGVVTRRNVATQMSGGEDSTPSSPQGNASLPSSSPSIHQCMVGKEREHCCKQEVR 240

Query: 241 DVEVDRGATEMQRSKGEDFPHLGNRNENATGAIQVSK 275
            VEVDRGATEMQRSKGEDFPHLGN NENATGAIQVSK
Sbjct: 241 VVEVDRGATEMQRSKGEDFPHLGNMNENATGAIQVSK 277

[Close]

BLAST of Cp4.1LG10g02610 vs. ExPASy TrEMBL
Match: A0A1S3B0Q2 (uncharacterized protein LOC103484775 OS=Cucumis melo OX=3656 GN=LOC103484775 PE=3 SV=1)

HSP 1 Score: 405 bits (1041), Expect = 1.53e-138
Identity = 224/310 (72.26%), Postives = 239/310 (77.10%), Query Frame = 0


Query: 1   MKERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY 60
           MKER CSSS+NFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSN+RRRNASVAA +PFY
Sbjct: 1   MKERSCSSSHNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNSRRRNASVAALTPFY 60

Query: 61  GRTPPSKWEDAERWISSP--GSGFGRGLQSHLQRRPKGSS--------------EVCITT 120
           GRT PSKWEDAERWISSP  G+GF R LQSHLQRRPK  S                 I T
Sbjct: 61  GRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVPNYSNYSPAIPT 120

Query: 121 PPENRGFATSKLGSALSTGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSNILNN 180
           P EN GFA SKLGSALSTGVLVADG+SICYGG+IERGQSYPE TIQ L+SAPRWSNIL+ 
Sbjct: 121 P-ENGGFAASKLGSALSTGVLVADGVSICYGGTIERGQSYPEHTIQRLVSAPRWSNILSE 180

Query: 181 SPLPSFQDEKHDGSEETMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSP-SIHQC 240
           SPLPSFQDE    SEETMDS VVSQRN+ATQMS  ED TPSSP+GN S+ SSSP S HQ 
Sbjct: 181 SPLPSFQDENFGCSEETMDSAVVSQRNMATQMSS-EDFTPSSPQGNGSISSSSPPSTHQS 240

Query: 241 MVGKESEHCCKQEVRDVEVDRGATEMQRSKG-------EDFPHLGNRNEN---------- 275
           MVGKES+HC KQEVRDVEVD+GA  MQRSKG       E+FPHL N +EN          
Sbjct: 241 MVGKESDHCSKQEVRDVEVDKGAM-MQRSKGHKLRLNEENFPHLENLDENVVEAGASTLD 300

[Close]

BLAST of Cp4.1LG10g02610 vs. TAIR 10
Match: AT4G36970.1 (Remorin family protein )

HSP 1 Score: 93.2 bits (230), Expect = 3.5e-19
Identity = 101/295 (34.24%), Postives = 137/295 (46.44%), Query Frame = 0


Query: 8   SSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNT---------RRRNASVAAFSP 67
           SS +F  F SPG P+Y      + +G SSER+PHP+S T         R   +S A  +P
Sbjct: 7   SSNSFGGFLSPGAPSY-----ADNKGWSSERVPHPSSTTSSSAINGGRRHIGSSSALTTP 66

Query: 68  FY-GRTPPSKWEDAERWISSPGSGFGRGL-----QSHLQRRPKGSSEVCI--TTP---PE 127
           FY GR  PSKWEDAERWI SP S + +G+      S  QRR K  S   +  T P   P 
Sbjct: 67  FYSGRAIPSKWEDAERWICSPVSTYPQGVCLNSSVSSEQRRQKSKSGPIVPPTLPHPHPT 126

Query: 128 NRGFATS---------------------KLGSALSTGVLVADGI---SICYGG--SIERG 187
           +   AT                        GS  STGVL AD +   S+  GG     RG
Sbjct: 127 SSSSATGCYHYSPRMMMRSMDAPPKGLMVAGSPFSTGVLEADRVFRGSVGGGGCDGYGRG 186

Query: 188 QSYPECTIQPLISAPRWSNILN--NSPLPSFQDEKHDGSEET-MDSGVVSQRNVATQMSG 247
             +          +  W ++++   S L S  D +      T M S VVS+R++ATQMS 
Sbjct: 187 PGHGH--------SRSWVDLMSEETSSLSSKTDTEEKAEMTTAMQSPVVSRRDMATQMSP 246

Query: 248 GEDSTPSSPRGNASLPSSSPSIHQCMVGKESEHCCKQEVRDVEVDRGATEMQRSK 254
            E    +SP  N    + SP +   +V       C+ EVR+V++D+GA  ++R K
Sbjct: 247 EE----TSPNNN----NQSPPL---VVSVIEPPPCRGEVREVKMDKGARMIKRPK 277

[Close]

BLAST of Cp4.1LG10g02610 vs. TAIR 10
Match: AT1G45207.2 (Remorin family protein )

HSP 1 Score: 79.3 bits (194), Expect = 5.2e-15
Identity = 94/286 (32.87%), Postives = 130/286 (45.45%), Query Frame = 0


Query: 3   ERICSSSYNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNTRRRNASVAAFSPFY-G 62
           +R   S+   S FPSPG P Y       Q+G SSER+P  ++    R+   A F P Y G
Sbjct: 172 KRASVSTNKSSVFPSPGTPTYLH---SMQKGWSSERVPLRSNG--GRSPPNAGFLPLYSG 231

Query: 63  RTPPSKWEDAERWISSPGSGFGRGLQS---HLQRRPKGSSEVCITTPPENRGFATSKL-- 122
           RT PSKWEDAERWI SP +  G    S     +RRPK  S      P    GFA   L  
Sbjct: 232 RTVPSKWEDAERWIVSPLAKEGAARTSFGASHERRPKAKS-----GPLGPPGFAYYSLYS 291

Query: 123 ----------------GSALSTGVLVADGISICYGGSIERGQSYPECTIQPLISAPRWSN 182
                            S  S GVL     ++   GS     ++P+  I P ++     +
Sbjct: 292 PAVPMVHGGNMGGLTASSPFSAGVLPE---TVSSRGSTT--AAFPQ-RIDPSMARSVSIH 351

Query: 183 ILNNSPLPSFQDEKHDGSEE-TMDSGVVSQRNVATQMSGGEDSTPSSPRGNASLPSSSPS 242
             + +   S QD+ H+  ++   D+  VS+R++ATQMS  E S   SP    S   SSPS
Sbjct: 352 GCSETLASSSQDDIHESMKDAATDAQAVSRRDMATQMS-PEGSIRFSPERQCSFSPSSPS 411

Query: 243 ---IHQCMVGKESEHCCKQEVRDVEVDRGATEMQRSKGEDFPHLGN 263
              I + +    + H  + EV+D++VD   T  + SK     + GN
Sbjct: 412 PLPISELL----NAHSNRAEVKDLQVDEKVTVTRWSKKHRGLYHGN 436

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g02610 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG10g02610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543975.1	7.02e-203	100.00	uncharacterized protein LOC111803686 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_023543974.1	1.31e-202	100.00	uncharacterized protein LOC111803686 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023543973.1	2.10e-202	100.00	uncharacterized protein LOC111803686 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022949719.1	4.11e-195	96.00	uncharacterized protein LOC111453030 isoform X2 [Cucurbita moschata]	[more]
XP_022949718.1	6.59e-195	96.00	uncharacterized protein LOC111453030 isoform X1 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG10g02610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GDN8	1.99e-195	96.00	uncharacterized protein LOC111453030 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GCU9	3.19e-195	96.00	uncharacterized protein LOC111453030 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IUN1	9.07e-191	94.58	uncharacterized protein LOC111478728 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IMD9	1.45e-190	94.58	uncharacterized protein LOC111478728 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3B0Q2	1.53e-138	72.26	uncharacterized protein LOC103484775 OS=Cucumis melo OX=3656 GN=LOC103484775 PE=...	[more]

BLAST of Cp4.1LG10g02610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36970.1	3.5e-19	34.24	Remorin family protein	[more]
AT1G45207.2	5.2e-15	32.87	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..225
None	No IPR available	PANTHER	PTHR31471	OS02G0116800 PROTEIN	coord: 6..255
None	No IPR available	PANTHER	PTHR31471:SF2	REMORIN FAMILY PROTEIN	coord: 6..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g02610.1	Cp4.1LG10g02610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress