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Cp4.1LG10g02240 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTTTCTTCTTCTTCGTCTTCATCTTCCTCCATTTCTTCCCTCTGCATCGTCTTAGCTTTTGACTTCTTTTGCAGTATTCTGATAAAAAGAAACATTCATGCAAACTCTGCAATTTCATTTGTTGATCGGTGCTCGTTAGGATAACGTCGGATCGTTTCAGGTAATTCCTAATGTTTTTCGTGTTTTAGTTACATTTAAGAAGTTCCCGTTTGGTTTCTTATTACTCTCCTGATTGATCTGAGTGTTTAATTCGAGGTTTGATCCATCTTCGACGTTGTAATTTGTAAATAGAGATGATTTTGGTCTGATTTTCAAACGAATTTTTATAATGTGAAACGATTCTGTTTTTTTCTTTTTTATNGTGCTCGACGTAATGACTGAATGCGAAAGGGATATTTAGGATAGCAAACAAAAGACCGATGTAAAGGCTTTATCACAAGTTTTTATTCATTCGTACTAGGCTGTTCTGTCCTCATTATTGCTACTGAATACCCAATTTATAATGCGTTGGTCAGTAGTATTTAAAAGAAAATATAAAATCTATCAAACTGTAGTCGATTGAATTAATGATTTTCTCAGACTAGAAGTTATTCCAGAAGCAGATTCTGAGTTTCTGAGCCACTTCTTATTTTGTTAATGGACTTTCTTTTCCCAGACTGTTCTGGAGACTCAAGATTCAATACGGCCTCAGGTAAACAGGAAAAGGGGGCTGAAATCCCAATGGAAAAGCTGCCTAAGGCACATGAAAAGGAGTACATGAGAATGGCCATGTTAAAGCATGAAGAAACATTCAAACAACAGGTTTTTCTCCAATTTTGATCTTCAGTTTGCATTTTTTTTTCTTTTCTTTTTTGTTTATAACCCAAAACAACCATGCAATTATAACACTGTTAAAGATGCATCTCTGCTTTCTGACCACTGATTTTTCCAATCTGGTCATCTTAACAAAAACATATTCAACTTGATCCATAATTTTGATAGTACTTCCGCTTTTTCTTTTCATGTTAGTTAATAAATATGGGTGTTTTGAATTTCTTGTGGTTCGATCTGAGAAAAGTGCGGTGCAACTTTTTAAAGTGGGGGAAAAGAAAAATCTAGAATTTGTGGTGGCAGGGCAATGGATGGATTGGATTGAATTCATAGTTATTGTCCATTTAGGGTTTTTGTCGTATATCTTATAATCTTCTATGGGCTACATCGTTGAAAAAGAAAAAAACATTCATTAGCCCATAGAAAACCCATATATCTCATAATCGATATTTAACATCATTGAATGGGTTCGTCCATTGGAAGTTAAATGTTGTTATTAGATACAAAATTTAATTTCATGTATATCAAATTTGTTAATTGAAAAAAACGTTGAATATACTAAAAGAACTATTAAACCTTTATGGACATGTTTATTATTTTTAAAGTAGAGAGAGATGTATTATACTTTCATGAAAAAAGTGAAAGAGGTTTAATGTTCTAAGGTTGGGAGGAACTATATAATGCAGGTACATGAACTTCATCGGCTTTATCGAACCCAAAAGACATTAATGAAAACCGTCGAGAAAAGCAGGGATAGTGGATGGAATCCAAAGAGTTGGGACAAAAGGAATGAGATATGCTTCAGACAAATCTATGAACAGGACGCAAAAAACTATTGTAGATCAACAACTCAGACGACCAAACTAGACTTGGAACAGCCGGCGGAAGATGAAGCAGAGGCCAATAACGGAGCTCTGCAGATCATAAACGAGAATGAACTGGAACTAACTCTAGGCCCTTCGAGTTACAATACTTCAGACTCGGGGATAACCACCCACTCTTCTTCTTCGACAGGGTCCAGCCATGAGGGAAGACGTATGGATAGAAAGCAAGTTAGAGGGCAGGAAATGGCGGTTTTGGGGGTACCTGAAAATCCCTCGGGATTCCAAAACGGAAGTGATAGGGGAGAGAAGAAGATGGTAGAGGTAGATTACCCTCCTTGGCTTTTTCAAGCTGTGAGCCTTAACATGACTTAGTTTTCGAGGTATAAAGAAAACCCATTCATTTCAATCAATCAATCAAATTATATGAGAAGAACAATATCTTTGGTTGCTTCTCATTCACTAATTAACAGGGTCATTGATGTTTAGTGCTATTCAGCTTCCTTCTTCATCTTGCTTGTATATCCAGATGTTGATGTGTATTGCTTTGTAAATTTTAACTTTCAGGAAAGAATCACTTTTGAATTTCAAGCTATTATTAATGTGACTTGAGAGAGGCCCAAGGGGGAATTATATGTATTTCTTTTAATATATATAATCTTT ATGGAGATAACGTCGGATCACTGTTCTGGAGACTCAAGATTCAATACGGCCTCAGGTAAACAGGAAAAGGGGGCTGAAATCCCAATGGAAAAGCTGCCTAAGGCACATGAAAAGGAGTACATGAGAATGGCCATGTTAAAGCATGAAGAAACATTCAAACAACAGGTACATGAACTTCATCGGCTTTATCGAACCCAAAAGACATTAATGAAAACCGTCGAGAAAAGCAGGGATAGTGGATGGAATCCAAAGAGTTGGGACAAAAGGAATGAGATATGCTTCAGACAAATCTATGAACAGGACGCAAAAAACTATTGTAGATCAACAACTCAGACGACCAAACTAGACTTGGAACAGCCGGCGGAAGATGAAGCAGAGGCCAATAACGGAGCTCTGCAGATCATAAACGAGAATGAACTGGAACTAACTCTAGGCCCTTCGAGTTACAATACTTCAGACTCGGGGATAACCACCCACTCTTCTTCTTCGACAGGGTCCAGCCATGAGGGAAGACGTATGGATAGAAAGCAAGTTAGAGGGCAGGAAATGGCGGTTTTGGGGGTACCTGAAAATCCCTCGGGATTCCAAAACGGAAGTGATAGGGGAGAGAAGAAGATGGTAGAGGTAGATTACCCTCCTTGGCTTTTTCAAGCTGTGAGCCTTAACATGACTTAGTTTTCGAGGTATAAAGAAAACCCATTCATTTCAATCAATCAATCAAATTATATGAGAAGAACAATATCTTTGGTTGCTTCTCATTCACTAATTAACAGGGTCATTGATGTTTAGTGCTATTCAGCTTCCTTCTTCATCTTGCTTGTATATCCAGATGTTGATGTGTATTGCTTTGTAAATTTTAACTTTCAGGAAAGAATCACTTTTGAATTTCAAGCTATTATTAATGTGACTTGAGAGAGGCCCAAGGGGGAATTATATGTATTTCTTTTAATATATATAATCTTT ATGGAGATAACGTCGGATCACTGTTCTGGAGACTCAAGATTCAATACGGCCTCAGGTAAACAGGAAAAGGGGGCTGAAATCCCAATGGAAAAGCTGCCTAAGGCACATGAAAAGGAGTACATGAGAATGGCCATGTTAAAGCATGAAGAAACATTCAAACAACAGGTACATGAACTTCATCGGCTTTATCGAACCCAAAAGACATTAATGAAAACCGTCGAGAAAAGCAGGGATAGTGGATGGAATCCAAAGAGTTGGGACAAAAGGAATGAGATATGCTTCAGACAAATCTATGAACAGGACGCAAAAAACTATTGTAGATCAACAACTCAGACGACCAAACTAGACTTGGAACAGCCGGCGGAAGATGAAGCAGAGGCCAATAACGGAGCTCTGCAGATCATAAACGAGAATGAACTGGAACTAACTCTAGGCCCTTCGAGTTACAATACTTCAGACTCGGGGATAACCACCCACTCTTCTTCTTCGACAGGGTCCAGCCATGAGGGAAGACGTATGGATAGAAAGCAAGTTAGAGGGCAGGAAATGGCGGTTTTGGGGGTACCTGAAAATCCCTCGGGATTCCAAAACGGAAGTGATAGGGGAGAGAAGAAGATGGTAGAGGTAGATTACCCTCCTTGGCTTTTTCAAGCTGTGAGCCTTAACATGACTTAG MEITSDHCSGDSRFNTASGKQEKGAEIPMEKLPKAHEKEYMRMAMLKHEETFKQQVHELHRLYRTQKTLMKTVEKSRDSGWNPKSWDKRNEICFRQIYEQDAKNYCRSTTQTTKLDLEQPAEDEAEANNGALQIINENELELTLGPSSYNTSDSGITTHSSSSTGSSHEGRRMDRKQVRGQEMAVLGVPENPSGFQNGSDRGEKKMVEVDYPPWLFQAVSLNMT Homology
BLAST of Cp4.1LG10g02240 vs. NCBI nr
Match: KAG7034303.1 (hypothetical protein SDJN02_04030 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 426 bits (1095), Expect = 4.95e-150 Identity = 216/224 (96.43%), Postives = 217/224 (96.88%), Query Frame = 0
BLAST of Cp4.1LG10g02240 vs. NCBI nr
Match: XP_023543361.1 (uncharacterized protein LOC111803264 [Cucurbita pepo subsp. pepo] >XP_023543362.1 uncharacterized protein LOC111803264 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 389 bits (999), Expect = 7.82e-136 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0
BLAST of Cp4.1LG10g02240 vs. NCBI nr
Match: XP_022949937.1 (uncharacterized protein LOC111453182 [Cucurbita moschata] >XP_022949938.1 uncharacterized protein LOC111453182 [Cucurbita moschata] >XP_022949939.1 uncharacterized protein LOC111453182 [Cucurbita moschata] >XP_022949940.1 uncharacterized protein LOC111453182 [Cucurbita moschata] >KAG6604141.1 hypothetical protein SDJN03_04750, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 383 bits (984), Expect = 1.51e-133 Identity = 194/196 (98.98%), Postives = 194/196 (98.98%), Query Frame = 0
BLAST of Cp4.1LG10g02240 vs. NCBI nr
Match: XP_022978899.1 (uncharacterized protein LOC111478714 [Cucurbita maxima] >XP_022978901.1 uncharacterized protein LOC111478714 [Cucurbita maxima] >XP_022978902.1 uncharacterized protein LOC111478714 [Cucurbita maxima] >XP_022978903.1 uncharacterized protein LOC111478714 [Cucurbita maxima]) HSP 1 Score: 374 bits (959), Expect = 9.77e-130 Identity = 190/196 (96.94%), Postives = 191/196 (97.45%), Query Frame = 0
BLAST of Cp4.1LG10g02240 vs. NCBI nr
Match: XP_038883305.1 (uncharacterized protein LOC120074293 isoform X1 [Benincasa hispida]) HSP 1 Score: 334 bits (857), Expect = 9.08e-114 Identity = 176/206 (85.44%), Postives = 188/206 (91.26%), Query Frame = 0
BLAST of Cp4.1LG10g02240 vs. ExPASy TrEMBL
Match: A0A6J1GEC8 (uncharacterized protein LOC111453182 OS=Cucurbita moschata OX=3662 GN=LOC111453182 PE=4 SV=1) HSP 1 Score: 383 bits (984), Expect = 7.32e-134 Identity = 194/196 (98.98%), Postives = 194/196 (98.98%), Query Frame = 0
BLAST of Cp4.1LG10g02240 vs. ExPASy TrEMBL
Match: A0A6J1IUL1 (uncharacterized protein LOC111478714 OS=Cucurbita maxima OX=3661 GN=LOC111478714 PE=4 SV=1) HSP 1 Score: 374 bits (959), Expect = 4.73e-130 Identity = 190/196 (96.94%), Postives = 191/196 (97.45%), Query Frame = 0
BLAST of Cp4.1LG10g02240 vs. ExPASy TrEMBL
Match: A0A1S3B1P5 (uncharacterized protein LOC103484836 OS=Cucumis melo OX=3656 GN=LOC103484836 PE=4 SV=1) HSP 1 Score: 301 bits (771), Expect = 1.67e-101 Identity = 164/197 (83.25%), Postives = 174/197 (88.32%), Query Frame = 0
BLAST of Cp4.1LG10g02240 vs. ExPASy TrEMBL
Match: A0A6J1KXC4 (uncharacterized protein LOC111497211 OS=Cucurbita maxima OX=3661 GN=LOC111497211 PE=4 SV=1) HSP 1 Score: 300 bits (767), Expect = 8.35e-101 Identity = 158/198 (79.80%), Postives = 176/198 (88.89%), Query Frame = 0
BLAST of Cp4.1LG10g02240 vs. ExPASy TrEMBL
Match: A0A6J1HJS3 (uncharacterized protein LOC111463569 OS=Cucurbita moschata OX=3662 GN=LOC111463569 PE=4 SV=1) HSP 1 Score: 296 bits (757), Expect = 2.88e-99 Identity = 158/199 (79.40%), Postives = 176/199 (88.44%), Query Frame = 0
BLAST of Cp4.1LG10g02240 vs. TAIR 10
Match: AT5G67390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 77.0 bits (188), Expect = 2.1e-14 Identity = 65/177 (36.72%), Postives = 91/177 (51.41%), Query Frame = 0
BLAST of Cp4.1LG10g02240 vs. TAIR 10
Match: AT5G67390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 186 Blast hits to 186 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). ) HSP 1 Score: 77.0 bits (188), Expect = 2.1e-14 Identity = 65/177 (36.72%), Postives = 91/177 (51.41%), Query Frame = 0
BLAST of Cp4.1LG10g02240 vs. TAIR 10
Match: AT5G57340.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 7.3e-07 Identity = 65/229 (28.38%), Postives = 95/229 (41.48%), Query Frame = 0
BLAST of Cp4.1LG10g02240 vs. TAIR 10
Match: AT5G57340.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 7.3e-07 Identity = 65/229 (28.38%), Postives = 95/229 (41.48%), Query Frame = 0
BLAST of Cp4.1LG10g02240 vs. TAIR 10
Match: AT1G26620.1 (Plant protein of unknown function (DUF863) ) HSP 1 Score: 43.9 bits (102), Expect = 2.0e-04 Identity = 39/132 (29.55%), Postives = 62/132 (46.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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