Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGGTAAAGAAAGAAGATCGAGCGAATCGCTCTGCGAGAAATCCATGCTATTGGTAGCGAATTTAATCAAGCTTTCCAGCTCTATTTCTTTCGCCAAAACCGCCAATGAAGTAACTGCTGGATCTAGGGCGGCAGTGCGGCAATCGCGAGGAAATCCGGCGACGACGCCTCTGATTCCAGGAAGTAGACGGTTGCAGGAGCCGCAGAGCCGTGCGAAGCCGATCTACGTGACGAAGCCAGGCGGAGGAGGCTTCCAAATCGGCCATGGATCGCCTAGGTATTCGTCGCCGTCGTCGCCGTCGCCTTCTTCGTATTTGATTCGCGAAGAGAGCGATTTTATTGAGGCGAATGTGGATGGTTGGGCGTCTGAATACATAGAGAAAGTTCATAAGAACAGGAAGAATTTGGATGAATCGACGGCGAAGAAGCCATATCCAATCGCTGAAAGTCGCCTTCGTAGAGCCTCCTCTGCTCGGAACTAA
mRNA sequence
ATGATCGGTAAAGAAAGAAGATCGAGCGAATCGCTCTGCGAGAAATCCATGCTATTGGTAGCGAATTTAATCAAGCTTTCCAGCTCTATTTCTTTCGCCAAAACCGCCAATGAAGTAACTGCTGGATCTAGGGCGGCAGTGCGGCAATCGCGAGGAAATCCGGCGACGACGCCTCTGATTCCAGGAAGTAGACGGTTGCAGGAGCCGCAGAGCCGTGCGAAGCCGATCTACGTGACGAAGCCAGGCGGAGGAGGCTTCCAAATCGGCCATGGATCGCCTAGGTATTCGTCGCCGTCGTCGCCGTCGCCTTCTTCGTATTTGATTCGCGAAGAGAGCGATTTTATTGAGGCGAATGTGGATGGTTGGGCGTCTGAATACATAGAGAAAGTTCATAAGAACAGGAAGAATTTGGATGAATCGACGGCGAAGAAGCCATATCCAATCGCTGAAAGTCGCCTTCGTAGAGCCTCCTCTGCTCGGAACTAA
Coding sequence (CDS)
ATGATCGGTAAAGAAAGAAGATCGAGCGAATCGCTCTGCGAGAAATCCATGCTATTGGTAGCGAATTTAATCAAGCTTTCCAGCTCTATTTCTTTCGCCAAAACCGCCAATGAAGTAACTGCTGGATCTAGGGCGGCAGTGCGGCAATCGCGAGGAAATCCGGCGACGACGCCTCTGATTCCAGGAAGTAGACGGTTGCAGGAGCCGCAGAGCCGTGCGAAGCCGATCTACGTGACGAAGCCAGGCGGAGGAGGCTTCCAAATCGGCCATGGATCGCCTAGGTATTCGTCGCCGTCGTCGCCGTCGCCTTCTTCGTATTTGATTCGCGAAGAGAGCGATTTTATTGAGGCGAATGTGGATGGTTGGGCGTCTGAATACATAGAGAAAGTTCATAAGAACAGGAAGAATTTGGATGAATCGACGGCGAAGAAGCCATATCCAATCGCTGAAAGTCGCCTTCGTAGAGCCTCCTCTGCTCGGAACTAA
Protein sequence
MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPATTPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSPSSPSPSSYLIREESDFIEANVDGWASEYIEKVHKNRKNLDESTAKKPYPIAESRLRRASSARN
Homology
BLAST of Cp4.1LG09g10580 vs. NCBI nr
Match:
XP_023541667.1 (uncharacterized protein LOC111801757 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 306 bits (785), Expect = 7.56e-105
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query: 1 MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPATTPLI 60
MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPATTPLI
Sbjct: 1 MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPATTPLI 60
Query: 61 PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSPSSPSPSSYLIREESDFIEANVD 120
PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSPSSPSPSSYLIREESDFIEANVD
Sbjct: 61 PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSPSSPSPSSYLIREESDFIEANVD 120
Query: 121 GWASEYIEKVHKNRKNLDESTAKKPYPIAESRLRRASSARN 161
GWASEYIEKVHKNRKNLDESTAKKPYPIAESRLRRASSARN
Sbjct: 121 GWASEYIEKVHKNRKNLDESTAKKPYPIAESRLRRASSARN 161
BLAST of Cp4.1LG09g10580 vs. NCBI nr
Match:
XP_022954798.1 (uncharacterized protein LOC111456949 [Cucurbita moschata])
HSP 1 Score: 298 bits (763), Expect = 1.71e-101
Identity = 157/161 (97.52%), Postives = 158/161 (98.14%), Query Frame = 0
Query: 1 MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPATTPLI 60
MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAA RQSRGNPATTPLI
Sbjct: 1 MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAGRQSRGNPATTPLI 60
Query: 61 PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSPSSPSPSSYLIREESDFIEANVD 120
PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSPS PSPSSYLIREESDF+EANVD
Sbjct: 61 PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSPSLPSPSSYLIREESDFVEANVD 120
Query: 121 GWASEYIEKVHKNRKNLDESTAKKPYPIAESRLRRASSARN 161
GWASEYIEKVHKNRKNLDESTAKKPY IAESRLRRASSARN
Sbjct: 121 GWASEYIEKVHKNRKNLDESTAKKPYSIAESRLRRASSARN 161
BLAST of Cp4.1LG09g10580 vs. NCBI nr
Match:
XP_022994676.1 (uncharacterized protein LOC111490318 [Cucurbita maxima])
HSP 1 Score: 288 bits (737), Expect = 1.42e-97
Identity = 155/161 (96.27%), Postives = 155/161 (96.27%), Query Frame = 0
Query: 1 MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPATTPLI 60
MI KERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPA TPLI
Sbjct: 1 MISKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPAKTPLI 60
Query: 61 PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSPSSPSPSSYLIREESDFIEANVD 120
PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSP SPSSYLIREESDFIEANVD
Sbjct: 61 PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSP---SPSSYLIREESDFIEANVD 120
Query: 121 GWASEYIEKVHKNRKNLDESTAKKPYPIAESRLRRASSARN 161
GWASEYIEKVHKNRKNLDESTAKKPY IAESRLRRASSARN
Sbjct: 121 GWASEYIEKVHKNRKNLDESTAKKPYSIAESRLRRASSARN 158
BLAST of Cp4.1LG09g10580 vs. NCBI nr
Match:
KAG6573030.1 (hypothetical protein SDJN03_26917, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 258 bits (660), Expect = 5.67e-81
Identity = 134/137 (97.81%), Postives = 135/137 (98.54%), Query Frame = 0
Query: 17 MLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPATTPLIPGSRRLQEPQSRAKPI 76
MLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPATTPLIPGSRRLQEPQSRAKPI
Sbjct: 1 MLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPATTPLIPGSRRLQEPQSRAKPI 60
Query: 77 YVTKPGGGGFQIGHGSPRYSSPSSPSPSSYLIREESDFIEANVDGWASEYIEKVHKNRKN 136
YVTKPGGGGFQIGHGSPRYSSPS PSPSSYLIREESDF+EANVDGWASEYIEKVHKNRKN
Sbjct: 61 YVTKPGGGGFQIGHGSPRYSSPSLPSPSSYLIREESDFVEANVDGWASEYIEKVHKNRKN 120
Query: 137 LDESTAKKPYPIAESRL 153
LDESTAKKPY IAESRL
Sbjct: 121 LDESTAKKPYSIAESRL 137
BLAST of Cp4.1LG09g10580 vs. NCBI nr
Match:
TYJ99125.1 (hypothetical protein E5676_scaffold248G003300 [Cucumis melo var. makuwa])
HSP 1 Score: 219 bits (558), Expect = 2.95e-70
Identity = 124/162 (76.54%), Postives = 136/162 (83.95%), Query Frame = 0
Query: 1 MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTAN-EVTAGSRAAVRQSRGNPATTPL 60
MI KE RS+ESLCEKSMLLVANLIKLSSSISFAKTAN E TAGS R+S GNPA TPL
Sbjct: 1 MIRKESRSTESLCEKSMLLVANLIKLSSSISFAKTANNEATAGSPTTRRRSGGNPAATPL 60
Query: 61 IPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSP--RYSSPSSPSPSSYLIREESDFIEA 120
IPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHGSP RYS+ SS S +I EESDF EA
Sbjct: 61 IPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSTSSSSS----VIYEESDFDEA 120
Query: 121 NVDGWASEYIEKVHKNRKNLDESTAKKPYPIAESRLRRASSA 159
NVDGWASEYIEKVHKNRK+ ++ST KKP +A+SR RR +S+
Sbjct: 121 NVDGWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSS 158
BLAST of Cp4.1LG09g10580 vs. ExPASy TrEMBL
Match:
A0A6J1GS37 (uncharacterized protein LOC111456949 OS=Cucurbita moschata OX=3662 GN=LOC111456949 PE=4 SV=1)
HSP 1 Score: 298 bits (763), Expect = 8.29e-102
Identity = 157/161 (97.52%), Postives = 158/161 (98.14%), Query Frame = 0
Query: 1 MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPATTPLI 60
MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAA RQSRGNPATTPLI
Sbjct: 1 MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAGRQSRGNPATTPLI 60
Query: 61 PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSPSSPSPSSYLIREESDFIEANVD 120
PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSPS PSPSSYLIREESDF+EANVD
Sbjct: 61 PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSPSLPSPSSYLIREESDFVEANVD 120
Query: 121 GWASEYIEKVHKNRKNLDESTAKKPYPIAESRLRRASSARN 161
GWASEYIEKVHKNRKNLDESTAKKPY IAESRLRRASSARN
Sbjct: 121 GWASEYIEKVHKNRKNLDESTAKKPYSIAESRLRRASSARN 161
BLAST of Cp4.1LG09g10580 vs. ExPASy TrEMBL
Match:
A0A6J1JZU4 (uncharacterized protein LOC111490318 OS=Cucurbita maxima OX=3661 GN=LOC111490318 PE=4 SV=1)
HSP 1 Score: 288 bits (737), Expect = 6.88e-98
Identity = 155/161 (96.27%), Postives = 155/161 (96.27%), Query Frame = 0
Query: 1 MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPATTPLI 60
MI KERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPA TPLI
Sbjct: 1 MISKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPAKTPLI 60
Query: 61 PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSPSSPSPSSYLIREESDFIEANVD 120
PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSP SPSSYLIREESDFIEANVD
Sbjct: 61 PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSP---SPSSYLIREESDFIEANVD 120
Query: 121 GWASEYIEKVHKNRKNLDESTAKKPYPIAESRLRRASSARN 161
GWASEYIEKVHKNRKNLDESTAKKPY IAESRLRRASSARN
Sbjct: 121 GWASEYIEKVHKNRKNLDESTAKKPYSIAESRLRRASSARN 158
BLAST of Cp4.1LG09g10580 vs. ExPASy TrEMBL
Match:
A0A5D3BLA2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003300 PE=4 SV=1)
HSP 1 Score: 219 bits (558), Expect = 1.43e-70
Identity = 124/162 (76.54%), Postives = 136/162 (83.95%), Query Frame = 0
Query: 1 MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTAN-EVTAGSRAAVRQSRGNPATTPL 60
MI KE RS+ESLCEKSMLLVANLIKLSSSISFAKTAN E TAGS R+S GNPA TPL
Sbjct: 1 MIRKESRSTESLCEKSMLLVANLIKLSSSISFAKTANNEATAGSPTTRRRSGGNPAATPL 60
Query: 61 IPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSP--RYSSPSSPSPSSYLIREESDFIEA 120
IPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHGSP RYS+ SS S +I EESDF EA
Sbjct: 61 IPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSTSSSSS----VIYEESDFDEA 120
Query: 121 NVDGWASEYIEKVHKNRKNLDESTAKKPYPIAESRLRRASSA 159
NVDGWASEYIEKVHKNRK+ ++ST KKP +A+SR RR +S+
Sbjct: 121 NVDGWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSS 158
BLAST of Cp4.1LG09g10580 vs. ExPASy TrEMBL
Match:
A0A0A0LTD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045720 PE=4 SV=1)
HSP 1 Score: 217 bits (552), Expect = 1.21e-69
Identity = 124/163 (76.07%), Postives = 136/163 (83.44%), Query Frame = 0
Query: 1 MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTAN-EVTAGSRAAVRQ-SRGNPATTP 60
MIGKE RS+ESLCEKSMLLVANLIKLSSSISFA+TAN E TAGS R+ S GNPA TP
Sbjct: 1 MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
Query: 61 LIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSP--RYSSPSSPSPSSYLIREESDFIE 120
LIPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHGSP RYSS SS S +I EESDF E
Sbjct: 61 LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSS----VIYEESDFDE 120
Query: 121 ANVDGWASEYIEKVHKNRKNLDESTAKKPYPIAESRLRRASSA 159
NVDGWASEYIEKVHKNRK+ ++ST KKP +A+SR RR +S+
Sbjct: 121 GNVDGWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSS 159
BLAST of Cp4.1LG09g10580 vs. ExPASy TrEMBL
Match:
A0A6J1E7B0 (uncharacterized protein LOC111431459 OS=Cucurbita moschata OX=3662 GN=LOC111431459 PE=4 SV=1)
HSP 1 Score: 214 bits (545), Expect = 1.60e-68
Identity = 119/159 (74.84%), Postives = 133/159 (83.65%), Query Frame = 0
Query: 1 MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPATTPLI 60
MIGKERRSSESLCEKSMLL+ANLIKLSSSISFA TANE TAG+ A +S GN A TPLI
Sbjct: 1 MIGKERRSSESLCEKSMLLLANLIKLSSSISFANTANEATAGTSATRERSGGNSAATPLI 60
Query: 61 PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSPSSPSPSSYLIREESDFIEANVD 120
PGSRRLQEPQSRAKPIYVTKPGGG FQI HGSPRYS PSS S SS +I ESD EANVD
Sbjct: 61 PGSRRLQEPQSRAKPIYVTKPGGGSFQISHGSPRYS-PSSSSSSSNVIPGESDCDEANVD 120
Query: 121 GWASEYIEKVHKNRKNLDE-STAKKPYPIAESRLRRASS 158
GWAS+YIE+VH+NRK+ D+ T +KPY + ++RLR A+S
Sbjct: 121 GWASKYIERVHRNRKDFDQYPTNEKPYSMGKNRLRTATS 158
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_023541667.1 | 7.56e-105 | 100.00 | uncharacterized protein LOC111801757 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022954798.1 | 1.71e-101 | 97.52 | uncharacterized protein LOC111456949 [Cucurbita moschata] | [more] |
| XP_022994676.1 | 1.42e-97 | 96.27 | uncharacterized protein LOC111490318 [Cucurbita maxima] | [more] |
| KAG6573030.1 | 5.67e-81 | 97.81 | hypothetical protein SDJN03_26917, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| TYJ99125.1 | 2.95e-70 | 76.54 | hypothetical protein E5676_scaffold248G003300 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1GS37 | 8.29e-102 | 97.52 | uncharacterized protein LOC111456949 OS=Cucurbita moschata OX=3662 GN=LOC1114569... | [more] |
| A0A6J1JZU4 | 6.88e-98 | 96.27 | uncharacterized protein LOC111490318 OS=Cucurbita maxima OX=3661 GN=LOC111490318... | [more] |
| A0A5D3BLA2 | 1.43e-70 | 76.54 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0LTD3 | 1.21e-69 | 76.07 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045720 PE=4 SV=1 | [more] |
| A0A6J1E7B0 | 1.60e-68 | 74.84 | uncharacterized protein LOC111431459 OS=Cucurbita moschata OX=3662 GN=LOC1114314... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
