Cp4.1LG09g10390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g10390
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	E3 ubiquitin-protein ligase SIS3-like
Location	Cp4.1LG09: 9074155 .. 9079026 (-)
RNA-Seq Expression	Cp4.1LG09g10390
Synteny	Cp4.1LG09g10390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGGTTTTTGCATAGCCCATTGATGAAAGCCACTCGCTATCTGCTGCGTTTCTGGGCGACCCCACCCTCCAACTATTGCAGAATCTTCCTCTGTAATCTCATCTCCATTTTATACTATCAAATCTTTGAAGAGGTTGATTCTGCCTCATAAAATAACTTGTAGTAGTTTGTCATTTTTCCTTCTTAATGTTTGGTTTAAATGGATTCAACTAACTTGCCAAACAAGATTGTGGCTCGAATTATGCTCTGAAACGTCATATTCTTCTGTTTTTCCATCTCTTTGTTCATCAATGATTCGAACCCAGATGAAATTTCTGGCCAAATGTTCGAGTTCTTCTTCGATTTCCCTTTCCCTTGTGGTTCTTTAATCGTTTCTTGCCTTTTCATGGCGACCCATTAGCCATTTTTGGCAGTTTTGAGTGTTCTTGAGTGTTCTTGGTTTAGTTTTTGGATATGGCGATTCGAGGGATCGATTTCAAATGGTAAATCTCTTTCCCATCGTTTCATTGGAATATGAATTCCCCCATTTTGATGGGTTTTTGATTTGCTTGAGGATTTTGGGGGTTTTCAGGTACGATGGATTCTTCTTGTCAATGCTTGCTACTAGCATGTATCCTTTGCCATATTGATTGAAGCTGCTGTTGTTTATGCTTTGTTAGAACCTTGTTAGGAGCCCTGCATCAGGCTTTCATTATATCTGTTCTTGTTCTTTGACTGTTTTTGCTTGGTAGAATAATTGTGACTATCAATTGGAGGCGGTACAATACATGTAGATATCCGTTGCACGTATGGATCGTGGTAGGCGTTCGAGTTTCGAAGAAGTAATACGAATCTAAGATAGGTTTGTGATTGCTTGTTCTGATGGCTATGTGTTTTACTTTCTTCTTTCAGGTTGATTATACCTCTGTGTTTGTTTTTCGCCTTTTGCTGTTCATAGATAATGCACTCTCAGCTGGAATGGGATTGTAAGGCCTTGTCTTTCTATCTCCCTGGACTTGTCCCCTATAAATTGTTCTTGAAGATTACTTTCTGTTCATTGAGTTCGATTAGGACTAGATATGCAACCAATTCTGTAACAGCCTAAGCTCACCGTTAGTAGATATTGTAAGATCTCACATCGGTTGGAGAAGAGAACGAAGCATTCCTTATAAGGGTGTGGAAATCTCTCCTTAGTTGACGCGTTTTAAAACCTTGAGGGGTAGCTTGGAAGGAAAAGTTCAAAGAGGACAATATTTGCTAGCGGTGGGCTTGGGTTATTACAAATGGTATCAGAGCCAGACACTGAGCGGTGTGCCAGGAGGACGCTGGGCCCCTAAGCGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTCTTTATAAGGGTGTGGAAATCGCTCCTTAGTTGATGCATTTTAAAACCTTGAGGGGAAGCTTGGAAGGAAAAGCCCAAAGAGGACAATATTTGCTAGTGGTGGGCCTGGGTTATAACAAATGTATAAGAGCTAGACACTGGGCGATGTGCCAGCGAGAACGCTGGCCCCCAAGAGGGGTGGACTGGGAGATCTCACATCAGTTGGAGAGAAGAACTAAACACTCCTTATAAGGGTGTGAAAACTTCTCCCTAGTGGACGCGTTTCAAAACCTTTAGGAAAAGCTCGAAAGGGAAAACCCAAGGAGGACAATATCTATAACAGTCCCGCTAGCAAATATTGTCCTCTTGGGACTTTCCCTTCTGGGACTTTCCCTTCTGGGCTTCCCCTCAAGGTTTTTAAAACGCGTATGCTTGGGAAGGTTTCCACACCCTTATAAAAAATGCTTCGTTCCCCTCTCCAATCGAGGTGGGATCTCACAACCCACCCCATTGGGGCCCAGCGTCCTCGCTGGTACTCGTTTCCTTCTCCAATTGATGTGGGGCCCCCCAATCCACCCCCTTTCGGGGCTCAGCATCCTTGCTGGCACATCGCCTCATGTCGACCCCTTCGAGGTTCAGCCTCATGGTTGAAAATCTTACTAAAAAGTTTGTGACGTTTTCTTGCAAGTTCTTAAGGGAGGCAGTGGTGTATTTCAGATTTGGTGCCTTACTCTTAACTGTTAAAACTTAACTTTCATTAGGGATTTTGGATGGCACCAACAATATGCTCAGTTTTGTGGAAGAGTTATGGTTCTTTCTATTCTCTCTATATTCCTCTACCCGTTTTTATGTGCGTGGACTGTAATCGGTACCCTATGGTTTCGAGACGCTAAAGACTGTGTAAGCTATACTATTACTCCGTTAACGTCGCCAAATTATCTATCTACAAGCTTTGATTGTTTCGTTCGTCTCGTCGATGCGTGCAGTTGCCCGAAGAAGGACAGAAATGGGGCTTCCTCATTTGGTTGCTTTTCAGCTACTGTGCCCTTCTTTGCATTGCTTGCATGTCAGTGGGAAAGGTTATTCATTTTCTGTGTACTTTCTCCAATAATTGAGTGCCTAAGCAAACCTATTGCTTCAAATTGTTCTTGTTTCATACTTGATGCTTCTAAAACCGTGTTAAGCAGTGGTTAGCGCGTCGACAAGCACACTTGTTACGTGCCCAACAAGGCGTCCCCGTGTCTGAATATGGGGTAAGCTCGAAAACTTCTTGTTGTTGGCACTTTAAATTGTGATCATATGCCTAATGATTGATTGGAGTAGCATTTTTCTACAAACCAGGTACTTGTTGATATGATTCGGGTTCCTGATTGGGCGTTTGAAGCTGCAGGACTTGAAATACGAGGCGTTGGTCAAGATGCTATGGGGTACCATCCCGGGCTGTTCTTAACCTCGGCTCAGGTAAATGTGTGATGCTTAAATCAATGCATATGGAAAACATTTTGCGCTTGGTTTTGGATCTGTTGTAGTAACATTTATTGAACTTGTCGATCGGTTTTTATATCGTCATTTCGCAAACGGTATGTTAAAGAGATCCTGTAACATGTGACGTACGCATTGTGAGATCTCACATCAGTTGGAGAGGGGAACGAAACATTCCTTATAAGGATGTGGAAACCTCTCCCTTGTAGACGCGTTTAAAAATCGTGAGGCTGACAACGATACGTAACGGGTCAAAGTGGACAATATCTGGTAGCGGTGGACTTGGGCTGTTACAAATGGTATCAGAGCCAGTCAGCGAGGACGCTGGGCTCACAAGGAGGTGGATTGTGAGATTCCACATCGGTTGAAGAGGGGAACGAAACATTGCTTATAAGGATGTGACAACCTCTCCCTTGCAGACACGTTTTAAAACCGTGAGGCTGATGACAATACGTAATGGGGCAAAGCGGACAATATCCACTAGTGGTGGGATTGGGCTGTTATGTAACGGGACAAAATGGACAATATCTGTTAGCGGTGGGCTTGTGCTGAAATATCAGTAGGCTTGCTCTTTCTTTGCTTATTATGAAACATAAAGTTCTTACGAACGGGCTATTGTTCGGGGGTTTGTGCAGCGGGAAGCTGTGGAAGCTCTCATCCAGGAACTTCCGAAGTTCGGGCTGAAGGCGGTCCCGACGGATTGCAGTGAATGCCCGATTTGCCTCGAAGAGTTCCATGTAGGGAATGAGGTAAACTGTTTGAACTTCTCTATGATGCAATTGTATTCATTCTGATCAAACATAAACTGAACAACTTCTTTGCATATCCATTTGATTTTGGGGTTGAACAAATGAATGCAACTGTTCTGTTCTCCTCCTGGACTTTGTGCAGGTTCGAGGTATGCCGTGTGCTCACAACTTCCATGTCGAATGTATCGACGAGTGGCTTCGTCTGAATGTTAAATGTCCTCGGTGCCGCTCCTCCGTCTTCCCAAATCTCGACCTCAATGCTCTTTCTAACCTGCACTTGGACACAGAACAAACATCTGCCAATCGACCTTCAGCCACTCATTTCGACAGCGTCGAGAACGGTAGCTCGCCCGTGCCATCTGCTTCTCGACATTGATCGTGTACAGACTGAACCCGCCTTTTTTGTCACTAAAACTTCTCAGCTCCTTCAACCCCAGAGACCTACCTACCATGAATCCTGCATAATCAGTAACCCTCACATCGGTTGGAGAGGGGAACGAAACAATCCTTACTAGGGTGTGAAAACCTCTCCATAGCATACACGTTTTAAAATCGTGAGGTTGACAGAACTACATAATGACCCAAAACGGACAATATCTGTTAGCGGTGGACTTGGGCTGTTACACGTCTATAGTTCTATGGTAAACCCGATGCAGGTTTGGAAGAAGGGGAAGAGGACAGATTTGCAGAGTGAGTCAACTTTTTGTTAGGTTTCCAAAGATGGTTATAAAATGCTTATGAACTCTGACAGTGACCTTCAAAGCTTGAGTCATGGAGGAAACAAGAGTTCACGTGGGTTTCTTCCATTAGCCCATGTTCATAGCTCGTGGTTCGTACAGATTCCTCACTACGTGACACAAACATTCCCCGCCCTCTCTTGTTCTTTTCTTAAGTTTAGAACACTAATCATATACATTATTACGAGCTTAAATGCCCGTTGTCTTAAGCGTGGCACTCATCGTGGTTCATATCAAATCGATCGTGATCTCATTTTGTTTGTGAGGAAATTGGAATAGAACTCGATCATGACTTGTTTGATTCAAAACAGGCTTGTCATGAGAACAGTAAGGTCTAATCTCAACTCAAACAGTGATCGTAATCTCGTTTTGTTTGTGAGGAAACTGGAATGGAACTCGATCATGACTTGTTTGACTTGAAACAGGCTTGTCATGAAAATAGTGAGGTCTGTTCTCAACTCATACAGTGATCGTAATCTCGTTCTGTTTGTAAGGAAACTGGAGTCGTACTCAATCATGACTTGTTTGACTCGAAACAGGCTTGTCATGAGAATAG

mRNA sequence

TTTTGGTTTTTGCATAGCCCATTGATGAAAGCCACTCGCTATCTGCTGCGTTTCTGGGCGACCCCACCCTCCAACTATTGCAGAATCTTCCTCTGTAATCTCATCTCCATTTTATACTATCAAATCTTTGAAGAGGTTGATTCTGCCTCATAAAATAACTTGTAGTAGTTTGTCATTTTTCCTTCTTAATGTTTGGTTTAAATGGATTCAACTAACTTGCCAAACAAGATTGTGGCTCGAATTATGCTCTGAAACGTCATATTCTTCTGTTTTTCCATCTCTTTGTTCATCAATGATTCGAACCCAGATGAAATTTCTGGCCAAATGTTCGAGTTCTTCTTCGATTTCCCTTTCCCTTGTGGTTCTTTAATCGTTTCTTGCCTTTTCATGGCGACCCATTAGCCATTTTTGGCAGTTTTGAGTGTTCTTGAGTGTTCTTGGTTTAGTTTTTGGATATGGCGATTCGAGGGATCGATTTCAAATGGTACGATGGATTCTTCTTGTCAATGCTTGCTACTAGCATAATAATTGTGACTATCAATTGGAGGCGGTACAATACATGTAGATATCCGTTGCACGTATGGATCGTGGTTGATTATACCTCTGTGTTTGTTTTTCGCCTTTTGCTGTTCATAGATAATGCACTCTCAGCTGGAATGGGATTGGATTTTGGATGGCACCAACAATATGCTCAGTTTTGTGGAAGAGTTATGGTTCTTTCTATTCTCTCTATATTCCTCTACCCGTTTTTATGTGCGTGGACTGTAATCGGTACCCTATGGTTTCGAGACGCTAAAGACTGTTTGCCCGAAGAAGGACAGAAATGGGGCTTCCTCATTTGGTTGCTTTTCAGCTACTGTGCCCTTCTTTGCATTGCTTGCATGTCAGTGGGAAAGTGGTTAGCGCGTCGACAAGCACACTTGTTACGTGCCCAACAAGGCGTCCCCGTGTCTGAATATGGGGTACTTGTTGATATGATTCGGGTTCCTGATTGGGCGTTTGAAGCTGCAGGACTTGAAATACGAGGCGTTGGTCAAGATGCTATGGGGTACCATCCCGGGCTGTTCTTAACCTCGGCTCAGCGGGAAGCTGTGGAAGCTCTCATCCAGGAACTTCCGAAGTTCGGGCTGAAGGCGGTCCCGACGGATTGCAGTGAATGCCCGATTTGCCTCGAAGAGTTCCATGTAGGGAATGAGGTTCGAGGTATGCCGTGTGCTCACAACTTCCATGTCGAATGTATCGACGAGTGGCTTCGTCTGAATGTTAAATGTCCTCGGTGCCGCTCCTCCGTCTTCCCAAATCTCGACCTCAATGCTCTTTCTAACCTGCACTTGGACACAGAACAAACATCTGCCAATCGACCTTCAGCCACTCATTTCGACAGCGTCGAGAACGGTAGCTCGCCCGTGCCATCTGCTTCTCGACATTGATCGTGTACAGACTGAACCCGCCTTTTTTGTCACTAAAACTTCTCAGCTCCTTCAACCCCAGAGACCTACCTACCATGAATCCTGCATAATCAGTAACCCTCACATCGGTTGGAGAGGGGAACGAAACAATCCTTACTAGGGTGTGAAAACCTCTCCATAGCATACACGTTTTAAAATCGTGAGGTTGACAGAACTACATAATGACCCAAAACGGACAATATCTGTTAGCGGTGGACTTGGGCTGTTACACGTCTATAGTTCTATGGTAAACCCGATGCAGGTTTGGAAGAAGGGGAAGAGGACAGATTTGCAGAGTGAGTCAACTTTTTGTTAGGTTTCCAAAGATGGTTATAAAATGCTTATGAACTCTGACAGTGACCTTCAAAGCTTGAGTCATGGAGGAAACAAGAGTTCACGTGGGTTTCTTCCATTAGCCCATGTTCATAGCTCGTGGTTCGTACAGATTCCTCACTACGTGACACAAACATTCCCCGCCCTCTCTTGTTCTTTTCTTAAGTTTAGAACACTAATCATATACATTATTACGAGCTTAAATGCCCGTTGTCTTAAGCGTGGCACTCATCGTGGTTCATATCAAATCGATCGTGATCTCATTTTGTTTGTGAGGAAATTGGAATAGAACTCGATCATGACTTGTTTGATTCAAAACAGGCTTGTCATGAGAACAGTAAGGTCTAATCTCAACTCAAACAGTGATCGTAATCTCGTTTTGTTTGTGAGGAAACTGGAATGGAACTCGATCATGACTTGTTTGACTTGAAACAGGCTTGTCATGAAAATAGTGAGGTCTGTTCTCAACTCATACAGTGATCGTAATCTCGTTCTGTTTGTAAGGAAACTGGAGTCGTACTCAATCATGACTTGTTTGACTCGAAACAGGCTTGTCATGAGAATAG

Coding sequence (CDS)

ATGGCGATTCGAGGGATCGATTTCAAATGGTACGATGGATTCTTCTTGTCAATGCTTGCTACTAGCATAATAATTGTGACTATCAATTGGAGGCGGTACAATACATGTAGATATCCGTTGCACGTATGGATCGTGGTTGATTATACCTCTGTGTTTGTTTTTCGCCTTTTGCTGTTCATAGATAATGCACTCTCAGCTGGAATGGGATTGGATTTTGGATGGCACCAACAATATGCTCAGTTTTGTGGAAGAGTTATGGTTCTTTCTATTCTCTCTATATTCCTCTACCCGTTTTTATGTGCGTGGACTGTAATCGGTACCCTATGGTTTCGAGACGCTAAAGACTGTTTGCCCGAAGAAGGACAGAAATGGGGCTTCCTCATTTGGTTGCTTTTCAGCTACTGTGCCCTTCTTTGCATTGCTTGCATGTCAGTGGGAAAGTGGTTAGCGCGTCGACAAGCACACTTGTTACGTGCCCAACAAGGCGTCCCCGTGTCTGAATATGGGGTACTTGTTGATATGATTCGGGTTCCTGATTGGGCGTTTGAAGCTGCAGGACTTGAAATACGAGGCGTTGGTCAAGATGCTATGGGGTACCATCCCGGGCTGTTCTTAACCTCGGCTCAGCGGGAAGCTGTGGAAGCTCTCATCCAGGAACTTCCGAAGTTCGGGCTGAAGGCGGTCCCGACGGATTGCAGTGAATGCCCGATTTGCCTCGAAGAGTTCCATGTAGGGAATGAGGTTCGAGGTATGCCGTGTGCTCACAACTTCCATGTCGAATGTATCGACGAGTGGCTTCGTCTGAATGTTAAATGTCCTCGGTGCCGCTCCTCCGTCTTCCCAAATCTCGACCTCAATGCTCTTTCTAACCTGCACTTGGACACAGAACAAACATCTGCCAATCGACCTTCAGCCACTCATTTCGACAGCGTCGAGAACGGTAGCTCGCCCGTGCCATCTGCTTCTCGACATTGA

Protein sequence

MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFVFRLLLFIDNALSAGMGLDFGWHQQYAQFCGRVMVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEEGQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDWAFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLEEFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSANRPSATHFDSVENGSSPVPSASRH

Homology

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BLAST of Cp4.1LG09g10390 vs. ExPASy Swiss-Prot
Match: Q8GYT9 (E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana OX=3702 GN=SIS3 PE=2 SV=2)

HSP 1 Score: 508.4 bits (1308), Expect = 5.8e-143
Identity = 229/300 (76.33%), Postives = 262/300 (87.33%), Query Frame = 0


Query: 1   MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFVFRLLLFI 60
           MA+RG+DFKWYDGFFLSMLATS+IIV +NW RY  C YPLH+WIVVDYT+VF+FR+ +F+
Sbjct: 1   MAMRGVDFKWYDGFFLSMLATSVIIVAVNWNRYRACEYPLHIWIVVDYTTVFIFRVFMFV 60

Query: 61  DNALSAGMGLDFGWHQQYAQFCGRVMVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE 120
           DN L++G+GLDFG  Q+ A FCGRV+VLS+LS+ LYPFL AWTVIGT WF  +K CLPEE
Sbjct: 61  DNGLASGLGLDFGSQQRNAMFCGRVVVLSVLSLLLYPFLWAWTVIGTQWFTKSKTCLPEE 120

Query: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW 180
           GQKWGFLIWL+FSYC LLCIA + VGKWL RRQ HLLRAQQG+P+SE+G+LVDMIRVPDW
Sbjct: 121 GQKWGFLIWLMFSYCGLLCIAFICVGKWLTRRQVHLLRAQQGIPISEFGILVDMIRVPDW 180

Query: 181 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE 240
           AFEAAG E+RG+ QDA  YHPGL+LT AQ EAVEALIQELPKF LKAVP DC EC ICLE
Sbjct: 181 AFEAAGQEMRGISQDAATYHPGLYLTPAQTEAVEALIQELPKFRLKAVPDDCGECLICLE 240

Query: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLD-TEQTS 300
           EFH+G+EVRG+PCAHNFHVECID+WLRLNVKCPRCR SVFP+LDL+ALSNL    TEQ S
Sbjct: 241 EFHIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPDLDLSALSNLQSSGTEQHS 300

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BLAST of Cp4.1LG09g10390 vs. ExPASy Swiss-Prot
Match: Q9LN71 (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-12
Identity = 48/194 (24.74%), Postives = 83/194 (42.78%), Query Frame = 0


Query: 98  FLCAWTVIGTLWFRDAKDCLPEEGQK--WGFLIWLLFS-YCALLCIACMSV-GKWLARRQ 157
           F   W +IG  W       L +E  +  W  +++L F  +  + C+A   V G  +    
Sbjct: 223 FSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCL 282

Query: 158 AHLLRAQQGVPVSEYGVLVDMIRVPDWAFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAV 217
             ++     V   E     D+ ++  + F   G   +    +A G   G+         +
Sbjct: 283 PCIIAVLYAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPI 342

Query: 218 E-ALIQELPKFGLKAVPTDCSECPICLEEFHVGNEVRGMPCAHNFHVECIDEWLRLNVKC 277
           E  L+QE             +EC ICL  +  G E+R +PC H+FH  C+D+WL +N  C
Sbjct: 343 EHTLLQE------------DAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATC 402

Query: 278 PRCRSSVFPNLDLN 287
           P C+ ++  + +L+
Sbjct: 403 PLCKYNILKSSNLD 404

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BLAST of Cp4.1LG09g10390 vs. ExPASy Swiss-Prot
Match: Q9ZV53 (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.2e-11
Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 214 EALIQELPKF------GLKAVPTDCSECPICLEEFHVGNEVRGMP-CAHNFHVECIDEWL 273
           ++LI  LP F      GLK  P D   CP+CL EF   +++R +P C+H FHVECID WL
Sbjct: 102 QSLIDTLPVFHYKSIVGLKISPFD---CPVCLCEFETEDKLRLLPKCSHAFHVECIDTWL 161

Query: 274 RLNVKCPRCRSSVFPNL----DLNALSNLHLDTEQTS 300
             +  CP CRS++        +L++   L L++EQ+S
Sbjct: 162 LSHSTCPLCRSNLLSGFSSHHNLSSSYLLVLESEQSS 195

[Close]

BLAST of Cp4.1LG09g10390 vs. ExPASy Swiss-Prot
Match: Q67YI6 (RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-10
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 226 KAVPTDCSECPICLEEFHVGNEVRGMP-CAHNFHVECIDEWLRLNVKCPRCRSSV 280
           K    +C +C +CL EF  G+ VR +P C H FH+ECIDEWLR +  CP CR+++
Sbjct: 147 KTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAI 201

[Close]

BLAST of Cp4.1LG09g10390 vs. ExPASy Swiss-Prot
Match: O22755 (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.0e-10
Identity = 29/59 (49.15%), Postives = 36/59 (61.02%), Query Frame = 0


Query: 224 GLKAVPTDCSECPICLEEFHVGNEVRGMP-CAHNFHVECIDEWLRLNVKCPRCRSSVFP 282
           G  A   D +EC ICL +F  G E+R +P C H+FHVECID+WL     CP CR  + P
Sbjct: 91  GAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILTP 149

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BLAST of Cp4.1LG09g10390 vs. NCBI nr
Match: XP_023542126.1 (E3 ubiquitin-protein ligase SIS3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 684 bits (1766), Expect = 5.74e-249
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFVFRLLLFI 60
           MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFVFRLLLFI
Sbjct: 1   MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFVFRLLLFI 60

Query: 61  DNALSAGMGLDFGWHQQYAQFCGRVMVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE 120
           DNALSAGMGLDFGWHQQYAQFCGRVMVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE
Sbjct: 61  DNALSAGMGLDFGWHQQYAQFCGRVMVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE 120

Query: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW 180
           GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW
Sbjct: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW 180

Query: 181 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE 240
           AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE
Sbjct: 181 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE 240

Query: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA 300
           EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA
Sbjct: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA 300

Query: 301 NRPSATHFDSVENGSSPVPSASRH 324
           NRPSATHFDSVENGSSPVPSASRH
Sbjct: 301 NRPSATHFDSVENGSSPVPSASRH 324

[Close]

BLAST of Cp4.1LG09g10390 vs. NCBI nr
Match: KAG7012241.1 (E3 ubiquitin-protein ligase SIS3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 678 bits (1750), Expect = 1.58e-246
Identity = 320/324 (98.77%), Postives = 322/324 (99.38%), Query Frame = 0


Query: 1   MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFVFRLLLFI 60
           MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVF FRLLLFI
Sbjct: 1   MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFAFRLLLFI 60

Query: 61  DNALSAGMGLDFGWHQQYAQFCGRVMVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE 120
           DNALSAGMGLDFGWHQQYAQFCGRV+VLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE
Sbjct: 61  DNALSAGMGLDFGWHQQYAQFCGRVVVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE 120

Query: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW 180
           GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW
Sbjct: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW 180

Query: 181 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE 240
           AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAV+ALIQELPKFGLKAVPTDCSECPICLE
Sbjct: 181 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVKALIQELPKFGLKAVPTDCSECPICLE 240

Query: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA 300
           EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA
Sbjct: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA 300

Query: 301 NRPSATHFDSVENGSSPVPSASRH 324
           NRPSATHFDSVENG SPVPSASRH
Sbjct: 301 NRPSATHFDSVENGGSPVPSASRH 324

[Close]

BLAST of Cp4.1LG09g10390 vs. NCBI nr
Match: KAG6573053.1 (E3 ubiquitin-protein ligase SIS3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 675 bits (1741), Expect = 2.42e-244
Identity = 319/324 (98.46%), Postives = 322/324 (99.38%), Query Frame = 0


Query: 1   MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFVFRLLLFI 60
           MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVF FRLLLFI
Sbjct: 51  MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFAFRLLLFI 110

Query: 61  DNALSAGMGLDFGWHQQYAQFCGRVMVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE 120
           DNALSAGMGLDFGWHQQYAQFCGRV+VLSILSIFLYPFLC+WTVIGTLWFRDAKDCLPEE
Sbjct: 111 DNALSAGMGLDFGWHQQYAQFCGRVVVLSILSIFLYPFLCSWTVIGTLWFRDAKDCLPEE 170

Query: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW 180
           GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPD 
Sbjct: 171 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDL 230

Query: 181 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE 240
           AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE
Sbjct: 231 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE 290

Query: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA 300
           EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA
Sbjct: 291 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA 350

Query: 301 NRPSATHFDSVENGSSPVPSASRH 324
           NRPSATHFDS+ENGSSPVPSASRH
Sbjct: 351 NRPSATHFDSIENGSSPVPSASRH 374

[Close]

BLAST of Cp4.1LG09g10390 vs. NCBI nr
Match: XP_022954674.1 (E3 ubiquitin-protein ligase SIS3-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 671 bits (1732), Expect = 8.13e-244
Identity = 317/322 (98.45%), Postives = 320/322 (99.38%), Query Frame = 0


Query: 1   MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFVFRLLLFI 60
           MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVF FRLLLFI
Sbjct: 1   MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFAFRLLLFI 60

Query: 61  DNALSAGMGLDFGWHQQYAQFCGRVMVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE 120
           DNALSAGMGLDFGW QQYAQFCGRV+VLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE
Sbjct: 61  DNALSAGMGLDFGWLQQYAQFCGRVVVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE 120

Query: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW 180
           GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW
Sbjct: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW 180

Query: 181 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE 240
           AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE
Sbjct: 181 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE 240

Query: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA 300
           EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSS+FPNLDLNALSNLHLDTEQTSA
Sbjct: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSIFPNLDLNALSNLHLDTEQTSA 300

Query: 301 NRPSATHFDSVENGSSPVPSAS 322
           NRPSATHFDS+ENGSSPVPSAS
Sbjct: 301 NRPSATHFDSIENGSSPVPSAS 322

[Close]

BLAST of Cp4.1LG09g10390 vs. NCBI nr
Match: XP_004152472.1 (E3 ubiquitin-protein ligase SIS3 isoform X1 [Cucumis sativus] >KGN64305.1 hypothetical protein Csa_013147 [Cucumis sativus])

HSP 1 Score: 614 bits (1584), Expect = 7.80e-221
Identity = 293/348 (84.20%), Postives = 308/348 (88.51%), Query Frame = 0


Query: 1   MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFVFRLLLFI 60
           MAIRG+DFKWYDGFFLSMLATSIIIVTINWRRYNTC YPLH+WIVVDYTSVF FRLLLFI
Sbjct: 1   MAIRGVDFKWYDGFFLSMLATSIIIVTINWRRYNTCTYPLHIWIVVDYTSVFAFRLLLFI 60

Query: 61  DNALSAGMGLDFGWHQQYAQFCGRVMVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE 120
           DNALSAGMGLDFGW Q+YA+FCGRV+VLSILS+ LYPFLCAWTVIGTLWFRDAKDCLPEE
Sbjct: 61  DNALSAGMGLDFGWQQRYARFCGRVVVLSILSLLLYPFLCAWTVIGTLWFRDAKDCLPEE 120

Query: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW 180
           GQKWGFLIWLLFSYCALLCIACMSVGKWL RRQAHL RAQQG+PVSEYGVLVDMIRVPDW
Sbjct: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLVRRQAHLFRAQQGIPVSEYGVLVDMIRVPDW 180

Query: 181 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE 240
           A+EAAGLE R +GQDA GYHPGLFLTSAQREAVEALIQELPKF LKAVPTDCSECPICLE
Sbjct: 181 AYEAAGLETRAIGQDATGYHPGLFLTSAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240

Query: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA 300
           EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDL+ALSNLH DTEQTS 
Sbjct: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLSALSNLHSDTEQTSH 300

Query: 301 N-----------RPSATH-------------FDSVENGSSPVPSASRH 324
           N           R + TH              D++ENG+SP+PSAS H
Sbjct: 301 NAFVTTQPSSLSRSTPTHAAHTENSLQTDTALDALENGNSPMPSASPH 348

[Close]

BLAST of Cp4.1LG09g10390 vs. ExPASy TrEMBL
Match: A0A6J1GTN6 (E3 ubiquitin-protein ligase SIS3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456863 PE=4 SV=1)

HSP 1 Score: 671 bits (1732), Expect = 3.94e-244
Identity = 317/322 (98.45%), Postives = 320/322 (99.38%), Query Frame = 0


Query: 1   MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFVFRLLLFI 60
           MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVF FRLLLFI
Sbjct: 1   MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFAFRLLLFI 60

Query: 61  DNALSAGMGLDFGWHQQYAQFCGRVMVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE 120
           DNALSAGMGLDFGW QQYAQFCGRV+VLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE
Sbjct: 61  DNALSAGMGLDFGWLQQYAQFCGRVVVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE 120

Query: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW 180
           GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW
Sbjct: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW 180

Query: 181 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE 240
           AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE
Sbjct: 181 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE 240

Query: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA 300
           EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSS+FPNLDLNALSNLHLDTEQTSA
Sbjct: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSIFPNLDLNALSNLHLDTEQTSA 300

Query: 301 NRPSATHFDSVENGSSPVPSAS 322
           NRPSATHFDS+ENGSSPVPSAS
Sbjct: 301 NRPSATHFDSIENGSSPVPSAS 322

[Close]

BLAST of Cp4.1LG09g10390 vs. ExPASy TrEMBL
Match: A0A0A0LQW0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G046030 PE=4 SV=1)

HSP 1 Score: 614 bits (1584), Expect = 3.78e-221
Identity = 293/348 (84.20%), Postives = 308/348 (88.51%), Query Frame = 0


Query: 1   MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFVFRLLLFI 60
           MAIRG+DFKWYDGFFLSMLATSIIIVTINWRRYNTC YPLH+WIVVDYTSVF FRLLLFI
Sbjct: 1   MAIRGVDFKWYDGFFLSMLATSIIIVTINWRRYNTCTYPLHIWIVVDYTSVFAFRLLLFI 60

Query: 61  DNALSAGMGLDFGWHQQYAQFCGRVMVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE 120
           DNALSAGMGLDFGW Q+YA+FCGRV+VLSILS+ LYPFLCAWTVIGTLWFRDAKDCLPEE
Sbjct: 61  DNALSAGMGLDFGWQQRYARFCGRVVVLSILSLLLYPFLCAWTVIGTLWFRDAKDCLPEE 120

Query: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW 180
           GQKWGFLIWLLFSYCALLCIACMSVGKWL RRQAHL RAQQG+PVSEYGVLVDMIRVPDW
Sbjct: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLVRRQAHLFRAQQGIPVSEYGVLVDMIRVPDW 180

Query: 181 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE 240
           A+EAAGLE R +GQDA GYHPGLFLTSAQREAVEALIQELPKF LKAVPTDCSECPICLE
Sbjct: 181 AYEAAGLETRAIGQDATGYHPGLFLTSAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240

Query: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA 300
           EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDL+ALSNLH DTEQTS 
Sbjct: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLSALSNLHSDTEQTSH 300

Query: 301 N-----------RPSATH-------------FDSVENGSSPVPSASRH 324
           N           R + TH              D++ENG+SP+PSAS H
Sbjct: 301 NAFVTTQPSSLSRSTPTHAAHTENSLQTDTALDALENGNSPMPSASPH 348

[Close]

BLAST of Cp4.1LG09g10390 vs. ExPASy TrEMBL
Match: A0A5D3BHC8 (E3 ubiquitin-protein ligase SIS3-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003600 PE=4 SV=1)

HSP 1 Score: 609 bits (1570), Expect = 5.53e-219
Identity = 292/350 (83.43%), Postives = 307/350 (87.71%), Query Frame = 0


Query: 1   MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFVFRLLLFI 60
           MAIRG+DFKWYDGFFLSMLATSIIIVTINWRRYNTC YPLH+WIVVDYTSVF FRLLLFI
Sbjct: 1   MAIRGVDFKWYDGFFLSMLATSIIIVTINWRRYNTCTYPLHIWIVVDYTSVFAFRLLLFI 60

Query: 61  DNALSAGMGLDFGWHQQYAQFCGRVMVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE 120
           DNALSAGMGLDFGW Q+YA+FCGRV+VLSILS+ LYPFLCAWTVIGTLWFRDAKDCLPEE
Sbjct: 61  DNALSAGMGLDFGWQQRYARFCGRVVVLSILSLLLYPFLCAWTVIGTLWFRDAKDCLPEE 120

Query: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW 180
           GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHL RAQQG+PVSEYGVLVDMIRVPDW
Sbjct: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLFRAQQGLPVSEYGVLVDMIRVPDW 180

Query: 181 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE 240
           A+EAAGLE R + QDA GYHPGLFLTSAQREAVEALIQELPKF LKAVPTDCSECPICLE
Sbjct: 181 AYEAAGLETRAIAQDATGYHPGLFLTSAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240

Query: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA 300
           EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDL+ALSNLH DTEQTS 
Sbjct: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLSALSNLHSDTEQTSH 300

Query: 301 N-----------RPSATH---------------FDSVENGSSPVPSASRH 324
           N           R + TH                D++ENG+S +PSAS H
Sbjct: 301 NAFVTTQPSSLSRSTPTHAAHTENTASLHTDTALDALENGNSSMPSASPH 350

[Close]

BLAST of Cp4.1LG09g10390 vs. ExPASy TrEMBL
Match: A0A1S3AVR9 (E3 ubiquitin-protein ligase SIS3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483452 PE=4 SV=1)

HSP 1 Score: 609 bits (1570), Expect = 5.53e-219
Identity = 292/350 (83.43%), Postives = 307/350 (87.71%), Query Frame = 0


Query: 1   MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFVFRLLLFI 60
           MAIRG+DFKWYDGFFLSMLATSIIIVTINWRRYNTC YPLH+WIVVDYTSVF FRLLLFI
Sbjct: 1   MAIRGVDFKWYDGFFLSMLATSIIIVTINWRRYNTCTYPLHIWIVVDYTSVFAFRLLLFI 60

Query: 61  DNALSAGMGLDFGWHQQYAQFCGRVMVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE 120
           DNALSAGMGLDFGW Q+YA+FCGRV+VLSILS+ LYPFLCAWTVIGTLWFRDAKDCLPEE
Sbjct: 61  DNALSAGMGLDFGWQQRYARFCGRVVVLSILSLLLYPFLCAWTVIGTLWFRDAKDCLPEE 120

Query: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW 180
           GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHL RAQQG+PVSEYGVLVDMIRVPDW
Sbjct: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLFRAQQGLPVSEYGVLVDMIRVPDW 180

Query: 181 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE 240
           A+EAAGLE R + QDA GYHPGLFLTSAQREAVEALIQELPKF LKAVPTDCSECPICLE
Sbjct: 181 AYEAAGLETRAIAQDATGYHPGLFLTSAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240

Query: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA 300
           EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDL+ALSNLH DTEQTS 
Sbjct: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLSALSNLHSDTEQTSH 300

Query: 301 N-----------RPSATH---------------FDSVENGSSPVPSASRH 324
           N           R + TH                D++ENG+S +PSAS H
Sbjct: 301 NAFVTTQPSSLSRSTPTHAAHTENTASLHTDTALDALENGNSSMPSASPH 350

[Close]

BLAST of Cp4.1LG09g10390 vs. ExPASy TrEMBL
Match: A0A5A7UGY5 (E3 ubiquitin-protein ligase SIS3-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00650 PE=4 SV=1)

HSP 1 Score: 608 bits (1569), Expect = 7.85e-219
Identity = 292/350 (83.43%), Postives = 306/350 (87.43%), Query Frame = 0


Query: 1   MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFVFRLLLFI 60
           MAIRG+DFKWYDGFFLSMLATSIIIVTINWRRYNTC YPLH+WIVVDYTSVF FRLLLFI
Sbjct: 1   MAIRGVDFKWYDGFFLSMLATSIIIVTINWRRYNTCTYPLHIWIVVDYTSVFAFRLLLFI 60

Query: 61  DNALSAGMGLDFGWHQQYAQFCGRVMVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE 120
           DNALSAGMGLDFGW Q+YA FCGRV+VLSILS+ LYPFLCAWTVIGTLWFRDAKDCLPEE
Sbjct: 61  DNALSAGMGLDFGWQQRYAHFCGRVVVLSILSLLLYPFLCAWTVIGTLWFRDAKDCLPEE 120

Query: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW 180
           GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHL RAQQG+PVSEYGVLVDMIRVPDW
Sbjct: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLFRAQQGLPVSEYGVLVDMIRVPDW 180

Query: 181 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE 240
           A+EAAGLE R + QDA GYHPGLFLTSAQREAVEALIQELPKF LKAVPTDCSECPICLE
Sbjct: 181 AYEAAGLETRAIAQDATGYHPGLFLTSAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240

Query: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA 300
           EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDL+ALSNLH DTEQTS 
Sbjct: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLSALSNLHSDTEQTSH 300

Query: 301 N-----------RPSATH---------------FDSVENGSSPVPSASRH 324
           N           R + TH                D++ENG+S +PSAS H
Sbjct: 301 NAFVTTQPSSLSRSTPTHAAHTENTASLHTDTALDALENGNSSMPSASPH 350

[Close]

BLAST of Cp4.1LG09g10390 vs. TAIR 10
Match: AT3G47990.1 (SUGAR-INSENSITIVE 3 )

HSP 1 Score: 508.4 bits (1308), Expect = 4.1e-144
Identity = 229/300 (76.33%), Postives = 262/300 (87.33%), Query Frame = 0


Query: 1   MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFVFRLLLFI 60
           MA+RG+DFKWYDGFFLSMLATS+IIV +NW RY  C YPLH+WIVVDYT+VF+FR+ +F+
Sbjct: 1   MAMRGVDFKWYDGFFLSMLATSVIIVAVNWNRYRACEYPLHIWIVVDYTTVFIFRVFMFV 60

Query: 61  DNALSAGMGLDFGWHQQYAQFCGRVMVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE 120
           DN L++G+GLDFG  Q+ A FCGRV+VLS+LS+ LYPFL AWTVIGT WF  +K CLPEE
Sbjct: 61  DNGLASGLGLDFGSQQRNAMFCGRVVVLSVLSLLLYPFLWAWTVIGTQWFTKSKTCLPEE 120

Query: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW 180
           GQKWGFLIWL+FSYC LLCIA + VGKWL RRQ HLLRAQQG+P+SE+G+LVDMIRVPDW
Sbjct: 121 GQKWGFLIWLMFSYCGLLCIAFICVGKWLTRRQVHLLRAQQGIPISEFGILVDMIRVPDW 180

Query: 181 AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE 240
           AFEAAG E+RG+ QDA  YHPGL+LT AQ EAVEALIQELPKF LKAVP DC EC ICLE
Sbjct: 181 AFEAAGQEMRGISQDAATYHPGLYLTPAQTEAVEALIQELPKFRLKAVPDDCGECLICLE 240

Query: 241 EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLD-TEQTS 300
           EFH+G+EVRG+PCAHNFHVECID+WLRLNVKCPRCR SVFP+LDL+ALSNL    TEQ S
Sbjct: 241 EFHIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPDLDLSALSNLQSSGTEQHS 300

[Close]

BLAST of Cp4.1LG09g10390 vs. TAIR 10
Match: AT1G12760.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-13
Identity = 48/194 (24.74%), Postives = 83/194 (42.78%), Query Frame = 0


Query: 98  FLCAWTVIGTLWFRDAKDCLPEEGQK--WGFLIWLLFS-YCALLCIACMSV-GKWLARRQ 157
           F   W +IG  W       L +E  +  W  +++L F  +  + C+A   V G  +    
Sbjct: 223 FSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCL 282

Query: 158 AHLLRAQQGVPVSEYGVLVDMIRVPDWAFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAV 217
             ++     V   E     D+ ++  + F   G   +    +A G   G+         +
Sbjct: 283 PCIIAVLYAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPI 342

Query: 218 E-ALIQELPKFGLKAVPTDCSECPICLEEFHVGNEVRGMPCAHNFHVECIDEWLRLNVKC 277
           E  L+QE             +EC ICL  +  G E+R +PC H+FH  C+D+WL +N  C
Sbjct: 343 EHTLLQE------------DAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATC 402

Query: 278 PRCRSSVFPNLDLN 287
           P C+ ++  + +L+
Sbjct: 403 PLCKYNILKSSNLD 404

[Close]

BLAST of Cp4.1LG09g10390 vs. TAIR 10
Match: AT1G12760.2 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-13
Identity = 48/194 (24.74%), Postives = 83/194 (42.78%), Query Frame = 0


Query: 98  FLCAWTVIGTLWFRDAKDCLPEEGQK--WGFLIWLLFS-YCALLCIACMSV-GKWLARRQ 157
           F   W +IG  W       L +E  +  W  +++L F  +  + C+A   V G  +    
Sbjct: 152 FSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCL 211

Query: 158 AHLLRAQQGVPVSEYGVLVDMIRVPDWAFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAV 217
             ++     V   E     D+ ++  + F   G   +    +A G   G+         +
Sbjct: 212 PCIIAVLYAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPI 271

Query: 218 E-ALIQELPKFGLKAVPTDCSECPICLEEFHVGNEVRGMPCAHNFHVECIDEWLRLNVKC 277
           E  L+QE             +EC ICL  +  G E+R +PC H+FH  C+D+WL +N  C
Sbjct: 272 EHTLLQE------------DAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATC 331

Query: 278 PRCRSSVFPNLDLN 287
           P C+ ++  + +L+
Sbjct: 332 PLCKYNILKSSNLD 333

[Close]

BLAST of Cp4.1LG09g10390 vs. TAIR 10
Match: AT3G61180.1 (RING/U-box superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-12
Identity = 48/195 (24.62%), Postives = 81/195 (41.54%), Query Frame = 0


Query: 98  FLCAWTVIGTLWFRDAKDCLPEEGQKWGFLIWLLFSYCALLCIACMSVGKWLARRQA--- 157
           F   W +IG  W     + L +   +  +L     ++  +  + C++V   +        
Sbjct: 194 FSFVWWIIGFYWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVASLIGIAVCCCL 253

Query: 158 -------HLLRAQQGVPVSEYGVLVDMIRVPDWAFEAAGLEIRGVGQDAMGYHPGLFLTS 217
                  + L  Q+G P  E   L+    +     E    EIR   +   G   GL  T 
Sbjct: 254 PCIIAILYALADQEGAPDEEIERLLKFKFLTVKNSEKVNGEIR---ETQGGIMTGLD-TE 313

Query: 218 AQREAVEALIQELPKFGLKAVPTDCSECPICLEEFHVGNEVRGMPCAHNFHVECIDEWLR 277
           +Q E              + + ++ +EC ICL  +  G E+R +PC H+FH  C+D+WLR
Sbjct: 314 SQTE--------------RMLLSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLR 370

Query: 278 LNVKCPRCRSSVFPN 283
           +N  CP C+ ++  N
Sbjct: 374 INATCPLCKFNILKN 370

[Close]

BLAST of Cp4.1LG09g10390 vs. TAIR 10
Match: AT2G18650.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 3.7e-12
Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 214 EALIQELPKF------GLKAVPTDCSECPICLEEFHVGNEVRGMP-CAHNFHVECIDEWL 273
           ++LI  LP F      GLK  P D   CP+CL EF   +++R +P C+H FHVECID WL
Sbjct: 102 QSLIDTLPVFHYKSIVGLKISPFD---CPVCLCEFETEDKLRLLPKCSHAFHVECIDTWL 161

Query: 274 RLNVKCPRCRSSVFPNL----DLNALSNLHLDTEQTS 300
             +  CP CRS++        +L++   L L++EQ+S
Sbjct: 162 LSHSTCPLCRSNLLSGFSSHHNLSSSYLLVLESEQSS 195

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g10390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYT9	5.8e-143	76.33	E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana OX=3702 GN=SIS3 PE=2 SV...	[more]
Q9LN71	1.6e-12	24.74	E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g127...	[more]
Q9ZV53	5.2e-11	41.24	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 P...	[more]
Q67YI6	1.2e-10	49.09	RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2	[more]
O22755	2.0e-10	49.15	Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]

BLAST of Cp4.1LG09g10390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542126.1	5.74e-249	100.00	E3 ubiquitin-protein ligase SIS3-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG7012241.1	1.58e-246	98.77	E3 ubiquitin-protein ligase SIS3, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6573053.1	2.42e-244	98.46	E3 ubiquitin-protein ligase SIS3, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022954674.1	8.13e-244	98.45	E3 ubiquitin-protein ligase SIS3-like isoform X1 [Cucurbita moschata]	[more]
XP_004152472.1	7.80e-221	84.20	E3 ubiquitin-protein ligase SIS3 isoform X1 [Cucumis sativus] >KGN64305.1 hypoth...	[more]

BLAST of Cp4.1LG09g10390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GTN6	3.94e-244	98.45	E3 ubiquitin-protein ligase SIS3-like isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A0A0LQW0	3.78e-221	84.20	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G046030 P...	[more]
A0A5D3BHC8	5.53e-219	83.43	E3 ubiquitin-protein ligase SIS3-like isoform X1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3AVR9	5.53e-219	83.43	E3 ubiquitin-protein ligase SIS3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5A7UGY5	7.85e-219	83.43	E3 ubiquitin-protein ligase SIS3-like isoform X1 OS=Cucumis melo var. makuwa OX=...	[more]

BLAST of Cp4.1LG09g10390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47990.1	4.1e-144	76.33	SUGAR-INSENSITIVE 3	[more]
AT1G12760.1	1.2e-13	24.74	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT1G12760.2	1.2e-13	24.74	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT3G61180.1	1.3e-12	24.62	RING/U-box superfamily protein	[more]
AT2G18650.1	3.7e-12	41.24	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 235..275 e-value: 1.1E-6 score: 38.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 234..276 e-value: 1.6E-13 score: 50.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 235..276 score: 12.769585
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 204..281 e-value: 1.5E-19 score: 71.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 298..324
None	No IPR available	PANTHER	PTHR47179:SF1	E3 UBIQUITIN-PROTEIN LIGASE SIS3	coord: 1..307
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 219..285
IPR044793	E3 ubiquitin-protein ligase SIS3	PANTHER	PTHR47179	E3 UBIQUITIN-PROTEIN LIGASE SIS3	coord: 1..307

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g10390.1	Cp4.1LG09g10390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0010182	sugar mediated signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004842	ubiquitin-protein transferase activity