Cp4.1LG09g09850 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g09850
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	26S proteasome non-ATPase regulatory subunit 6 homolog
Location	Cp4.1LG09: 8715349 .. 8718424 (-)
RNA-Seq Expression	Cp4.1LG09g09850
Synteny	Cp4.1LG09g09850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGGAAGCCACACCTCCGCCAATCTTGGTGCCTCCTCCTGCAAGAAAGACATCACAGGGACGACGCCCAAATTCTTCACTCGGCGAGCAATTTCTCAGTCGCCATGGAAGGACAGGAGGGAACTCAGCAGCCTCATCTCGTGCTTGCTAACAAGCTCTTCCTTCTAACTCACCCGGATGTTCAAGATATCGAGAAGGTTAATCTTAGGGAGGAAGTATTGGCCTCCGTTAAAGCTGATGGTAATTCGCGGATTGCTTCATACTCTCAATGAGTTTCATCGATTTCGCATTGTGATTTCTGTCTTACGAAATGTGGTTTTTTCTTCTCTGTAATTTGTATTGTGTAGACATGGCTCCTTTATACGAAGCCCTAACCGGCAATTCGCTGTTGGATTTGGATCGGAACGTGTTGGACTCGATGCGTGCGAAAAACGAGGAGGAGTTGAAGAAGCTGGACGAGAAGTGAGTTCTTTCATACTATCGTTGATCTGTTTTTTCGAGTGTTCTTTAGTGTGAGGGTTATGTAGGAGAGTACATCTGAAGTTCTTTGAATATACGTGAATGTGCATTAAGTTGATTATCCTTGAATTGGCATCGATTTACAGTTCCACTTCCTATCAACACATCGACTTTCAACTTTAGTTAATTCGGAATTTCCATGGATGTGCGAATCTGTTCTATTTGAGGCGCAGTTCTACTTAGCTTTTGGATATGATTCTACCATAACTGACCTTACTTTGCTAAATTCCTAATTGATGAAAGGTTATGCTGCTGCTGAATGTTTTGATTTTGTATGGTGACTTTCTGTGGTTCTTTTTGTTTTATAGTAATTGAATATGACGAGTAGGGCACATATGAGTTCAAAATATTGTTGCACGCTGATGGGAAATAGATTTCAGATCTACTAAAATAGATTGAATAACCAACAATACAAGTTGCTAAATGATGATCTGGTAATTTGAAGAATTTTGAGAACTCCTTCGAGTCGATATCTATTGAAACTCTCGTTGAGTCCCTTCACTGCATTCCTCCTTTATTTAAACAACGCACTTAATGCATACCCACACTGGATATGGATTTGGATTTGAATGGTTGATCTGTGTTTCTTGTAGTTAATGGCCACTATTTTTGTAGCTGTTTATGGTGCCATGCTGTTGTGTGTTATTTTGTTTATAACTTTGAACAGAACAGCAATGTGTTTATTTAGCCATTCATCAATCTTTTACTCAGGATTGCTGATGCTGAAGAAAACTTGGGTGAAAGTGAAGTTCGAGAAGCTCATTTAGCCAAATCACTTTTCTTCATTCGTATCGGTGATAAGGTTCGTTAAATCTTTCTCCCCAAGTATTGTAGGGCTGTTCTACGACTTCCACCTAACGTTCTAGATTTTGACCTCAGGACAGAGCACTGGAGCAACTCAAGGTAACTGAGAGCAAAACAGTTGCGGTTGGACTTAAGATGGATTTGGTTTTCCATACTCTACAGCTTGGATTTTTCTACATGGATTTTGACCTCATCTCGAAAAGTATCGAAAAAGCTAAAAAGTAAGCCATGATATGAACATCGCGCGTAGTATTTCTTTTCAAAATCAACATTTGTATGTTATTGGTTGTGATTGTTGGATGATAGAAGTCCCACATCGGCTAATTTAGGGAATGATCATGGGTTTATAATCAAAGAATACACTCTCCATTGGTGTGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTAGAGAGTCATGTTCGTCTAACAGTGATTACTTGCTCTGTTTGCCAGCTTGTTTGAAGAAGGAGGTGATTGGGAAAGAAAGAATCGTCTGAAGGTGTATGAAGGCTTGTACTGCATGTCGACTCGAAACTTCAAGAAAGCAGCCAACTTGTTTTTGGATTCCATCTCGACTTTCACTACATACGAGCTTTTTCCTTATGACACATTCATATTTTATACAGTTCTCACAAGCATTATATCTTTGGATAGAGTGTCTCTAAAGCAAAAGGTACTTAAAATTTCCATGAATTTGCATTAAGTTTTTTGTATCATGGATAGTTGGCACGTCTTCCCAATTGCTCTATCGATTTTCATTCATTTACTGTAGGTCGTTGATGCCCCTGAGATATTGACGGTGATCGGAAAAGTCCCATACCTTTCTGACTTTTTGAACTCTTTGTATGACTGTCAATATAAATCATTTTTCTCAGCCTTCGGTAAGCAGGAAATTTTACACGATGCTTAAATCCGTGACCGATAATCTACTTGTTTCGGGTTTCACATTTCTTTATTTGATCTGTATCAATGCAGCTGGTCTGACCGAGCAAATAAAATTAGACCGTTATTTGCACCCGCACTTCAGGTACTACATGAGAGAGGTCAGAACTGTTGTTTATTCCCAGTTTCTGGAGTCCTATAAGAGTGTCACAATCAAAGCAATGGCTAATGCATTTGGAGTATCTGTGGAATTTATCGATCTGTAAGTGTTCATGCATGGATACTAATCGTCTAAATGATGTCTAAATGATTGTTCTCTCTCATAAAATGTGTTTCTCTGATGGTGCCAGGGAGTTGTCTCGTTTCATTGCTGCGGGAAAACTTCATTGCAAGATCGATAAAGTAGCAGGTGTTCTCGAAACTAATCGTCCTGATTCGAAGAACGCTCTGTACCAAGCTACCATCAAGCAAGGAGACTTCTTACTTAACCGTATCCAGAAGTTGTCTCGTGTCATTGATCTGTAACTACGATTTTAGTTTGCGTCGATGAAATTTGAGCATCGGAACTTCGTGAAAATGGCGCTGTCGTTTCGTTCTAAACACATTGGCGCCTCAGGCTTACTGTCGTCGTTATTACTTGATTTTGATATATCAATTGAGTGTCTTGTTAGAAATTAGATGAATGCTTTACACTGGCCCTTTTCATGTCTTCTTGTTTTTTCTAGAGTCATATTCGTTTTATCTTTCCTTCTTTTTATATCGACTTTTGAGCACGAAACCGGGATCAATATGTCTAGCTTGATGAATTGAGACGGTTGGATGATGAAAG

mRNA sequence

AAATGGAAGCCACACCTCCGCCAATCTTGGTGCCTCCTCCTGCAAGAAAGACATCACAGGGACGACGCCCAAATTCTTCACTCGGCGAGCAATTTCTCAGTCGCCATGGAAGGACAGGAGGGAACTCAGCAGCCTCATCTCGTGCTTGCTAACAAGCTCTTCCTTCTAACTCACCCGGATGTTCAAGATATCGAGAAGGTTAATCTTAGGGAGGAAGTATTGGCCTCCGTTAAAGCTGATGACATGGCTCCTTTATACGAAGCCCTAACCGGCAATTCGCTGTTGGATTTGGATCGGAACGTGTTGGACTCGATGCGTGCGAAAAACGAGGAGGAGTTGAAGAAGCTGGACGAGAAGATTGCTGATGCTGAAGAAAACTTGGGTGAAAGTGAAGTTCGAGAAGCTCATTTAGCCAAATCACTTTTCTTCATTCGTATCGGTGATAAGGACAGAGCACTGGAGCAACTCAAGGTAACTGAGAGCAAAACAGTTGCGGTTGGACTTAAGATGGATTTGGTTTTCCATACTCTACAGCTTGGATTTTTCTACATGGATTTTGACCTCATCTCGAAAAGCTTGTACTGCATGTCGACTCGAAACTTCAAGAAAGCAGCCAACTTGTTTTTGGATTCCATCTCGACTTTCACTACATACGAGCTTTTTCCTTATGACACATTCATATTTTATACAGTTCTCACAAGCATTATATCTTTGGATAGAGTGTCTCTAAAGCAAAAGGTCGTTGATGCCCCTGAGATATTGACGGTGATCGGAAAAGTCCCATACCTTTCTGACTTTTTGAACTCTTTGTATGACTGTCAATATAAATCATTTTTCTCAGCCTTCGCTGGTCTGACCGAGCAAATAAAATTAGACCGTTATTTGCACCCGCACTTCAGGTACTACATGAGAGAGGTCAGAACTGTTGTTTATTCCCAGTTTCTGGAGTCCTATAAGAGTGTCACAATCAAAGCAATGGCTAATGCATTTGGAGTATCTGTGGAATTTATCGATCTGGAGTTGTCTCGTTTCATTGCTGCGGGAAAACTTCATTGCAAGATCGATAAAGTAGCAGGTGTTCTCGAAACTAATCGTCCTGATTCGAAGAACGCTCTGTACCAAGCTACCATCAAGCAAGGAGACTTCTTACTTAACCGTATCCAGAAGTTGTCTCGTGTCATTGATCTGTAACTACGATTTTAGTTTGCGTCGATGAAATTTGAGCATCGGAACTTCGTGAAAATGGCGCTGTCGTTTCGTTCTAAACACATTGGCGCCTCAGGCTTACTGTCGTCGTTATTACTTGATTTTGATATATCAATTGAGTGTCTTGTTAGAAATTAGATGAATGCTTTACACTGGCCCTTTTCATGTCTTCTTGTTTTTTCTAGAGTCATATTCGTTTTATCTTTCCTTCTTTTTATATCGACTTTTGAGCACGAAACCGGGATCAATATGTCTAGCTTGATGAATTGAGACGGTTGGATGATGAAAG

Coding sequence (CDS)

AAATGGAAGCCACACCTCCGCCAATCTTGGTGCCTCCTCCTGCAAGAAAGACATCACAGGGACGACGCCCAAATTCTTCACTCGGCGAGCAATTTCTCAGTCGCCATGGAAGGACAGGAGGGAACTCAGCAGCCTCATCTCGTGCTTGCTAACAAGCTCTTCCTTCTAACTCACCCGGATGTTCAAGATATCGAGAAGGTTAATCTTAGGGAGGAAGTATTGGCCTCCGTTAAAGCTGATGACATGGCTCCTTTATACGAAGCCCTAACCGGCAATTCGCTGTTGGATTTGGATCGGAACGTGTTGGACTCGATGCGTGCGAAAAACGAGGAGGAGTTGAAGAAGCTGGACGAGAAGATTGCTGATGCTGAAGAAAACTTGGGTGAAAGTGAAGTTCGAGAAGCTCATTTAGCCAAATCACTTTTCTTCATTCGTATCGGTGATAAGGACAGAGCACTGGAGCAACTCAAGGTAACTGAGAGCAAAACAGTTGCGGTTGGACTTAAGATGGATTTGGTTTTCCATACTCTACAGCTTGGATTTTTCTACATGGATTTTGACCTCATCTCGAAAAGCTTGTACTGCATGTCGACTCGAAACTTCAAGAAAGCAGCCAACTTGTTTTTGGATTCCATCTCGACTTTCACTACATACGAGCTTTTTCCTTATGACACATTCATATTTTATACAGTTCTCACAAGCATTATATCTTTGGATAGAGTGTCTCTAAAGCAAAAGGTCGTTGATGCCCCTGAGATATTGACGGTGATCGGAAAAGTCCCATACCTTTCTGACTTTTTGAACTCTTTGTATGACTGTCAATATAAATCATTTTTCTCAGCCTTCGCTGGTCTGACCGAGCAAATAAAATTAGACCGTTATTTGCACCCGCACTTCAGGTACTACATGAGAGAGGTCAGAACTGTTGTTTATTCCCAGTTTCTGGAGTCCTATAAGAGTGTCACAATCAAAGCAATGGCTAATGCATTTGGAGTATCTGTGGAATTTATCGATCTGGAGTTGTCTCGTTTCATTGCTGCGGGAAAACTTCATTGCAAGATCGATAAAGTAGCAGGTGTTCTCGAAACTAATCGTCCTGATTCGAAGAACGCTCTGTACCAAGCTACCATCAAGCAAGGAGACTTCTTACTTAACCGTATCCAGAAGTTGTCTCGTGTCATTGATCTGTAA

Protein sequence

KWKPHLRQSWCLLLQERHHRDDAQILHSASNFSVAMEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLLDLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQLKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKSLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKNALYQATIKQGDFLLNRIQKLSRVIDL

Homology

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BLAST of Cp4.1LG09g09850 vs. ExPASy Swiss-Prot
Match: Q93Y35 (26S proteasome non-ATPase regulatory subunit 6 homolog OS=Arabidopsis thaliana OX=3702 GN=RPN7 PE=1 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 5.0e-165
Identity = 301/384 (78.39%), Postives = 338/384 (88.02%), Query Frame = 0


Query: 38  GQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLLDL 97
           G EG+QQPHL+LANKLFLLTHPDV DIEKV L+ EVL  +++  MAPLYE L  +S+LDL
Sbjct: 4   GAEGSQQPHLILANKLFLLTHPDVPDIEKVQLKSEVLDFIRSHGMAPLYETLIASSVLDL 63

Query: 98  DRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQLK 157
           D+++L+SMRA NEEELKKLDEKIADAEENLGESEVREAHLAK+L+FIRI DK++ALEQLK
Sbjct: 64  DQSLLESMRAANEEELKKLDEKIADAEENLGESEVREAHLAKALYFIRISDKEKALEQLK 123

Query: 158 VTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS------------------------- 217
           +TE KTVAVG KMD+VF+TLQL FFYMDFDL+SKS                         
Sbjct: 124 LTEGKTVAVGQKMDVVFYTLQLAFFYMDFDLVSKSIDKAKKLFEEGGDWERKNRLKVYEG 183

Query: 218 LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPE 277
           LYCMSTRNFKKAA+LFLDSISTFTTYE+FPY+TFIFYTVLTSII+LDRVSLKQKVVDAPE
Sbjct: 184 LYCMSTRNFKKAASLFLDSISTFTTYEIFPYETFIFYTVLTSIITLDRVSLKQKVVDAPE 243

Query: 278 ILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYS 337
           ILTV+GK+P+LS+FLNSLY+CQYK+FFSAFAG+  QIK DRYL+PHFR+YMREVRTVVYS
Sbjct: 244 ILTVLGKIPFLSEFLNSLYECQYKAFFSAFAGMAVQIKYDRYLYPHFRFYMREVRTVVYS 303

Query: 338 QFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKNAL 397
           QFLESYKSVT++AMA AFGVSV+FID ELSRFIAAGKLHCKIDKVAGVLETNRPD+KNAL
Sbjct: 304 QFLESYKSVTVEAMAKAFGVSVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDAKNAL 363

[Close]

BLAST of Cp4.1LG09g09850 vs. ExPASy Swiss-Prot
Match: Q8W425 (26S proteasome non-ATPase regulatory subunit 6 OS=Oryza sativa subsp. japonica OX=39947 GN=RPN7 PE=2 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 4.7e-163
Identity = 300/384 (78.12%), Postives = 336/384 (87.50%), Query Frame = 0


Query: 38  GQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLLDL 97
           G+EG QQPHLVLA+KLFLL+HPDV D+ KV+LR +VLA+VK+DDMA LYE+L    +L+ 
Sbjct: 6   GEEGKQQPHLVLAHKLFLLSHPDVDDLAKVDLRADVLAAVKSDDMASLYESLGAGGVLET 65

Query: 98  DRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQLK 157
           D  +L  MR + EEE++KLDEKIADAEENLGESEVREAHLAKSL+FIR+G+K++ALEQLK
Sbjct: 66  DAALLAEMRGRIEEEIRKLDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLK 125

Query: 158 VTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS------------------------- 217
           VTE KTVAVG KMDLVFHTLQ+GFFYMDFDLISKS                         
Sbjct: 126 VTEGKTVAVGQKMDLVFHTLQIGFFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVYEG 185

Query: 218 LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPE 277
           LYCM+TRNFKKAA+LFLDSISTFTTYELFPYDTFIFYTVLTS+ISLDRVSLK KVVDAPE
Sbjct: 186 LYCMATRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSVISLDRVSLKAKVVDAPE 245

Query: 278 ILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYS 337
           IL VIGKVP+LS+FLNSLY+CQYKSFF+AF+GLTEQIKLDRYL PHFRYYMREVRTVVYS
Sbjct: 246 ILAVIGKVPHLSEFLNSLYNCQYKSFFAAFSGLTEQIKLDRYLQPHFRYYMREVRTVVYS 305

Query: 338 QFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKNAL 397
           QFLESYKSVT++AMA+AFGV+V+FIDLELSRFIAAGKLHCKIDKVA VLETNRPD++NA 
Sbjct: 306 QFLESYKSVTMEAMASAFGVTVDFIDLELSRFIAAGKLHCKIDKVACVLETNRPDARNAF 365

[Close]

BLAST of Cp4.1LG09g09850 vs. ExPASy Swiss-Prot
Match: Q15008 (26S proteasome non-ATPase regulatory subunit 6 OS=Homo sapiens OX=9606 GN=PSMD6 PE=1 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 3.2e-95
Identity = 188/379 (49.60%), Postives = 266/379 (70.18%), Query Frame = 0


Query: 43  QQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLLDLDRNVL 102
           + P L +A   FLL+ P+ +    V  R+E++A+V+ ++MAP YEAL  +    +D ++L
Sbjct: 13  KNPDLRIAQLRFLLSLPEHRGDAAV--RDELMAAVRDNNMAPYYEALCKSLDWQIDVDLL 72

Query: 103 DSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQLKVTESK 162
           + M+  NE+ELK+LDE++ DAE+NLGESE+R+A +AK+ +  RIGDK+ AL   + T  K
Sbjct: 73  NKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDK 132

Query: 163 TVAVGLKMDLVFHTLQLGFFYMDFDLISKS-------------------------LYCMS 222
           TVA+G ++D+VF+ L++G FYMD DLI+++                         LYC++
Sbjct: 133 TVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVA 192

Query: 223 TRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVI 282
            R+FK+AA LFLD++STFT+YEL  Y TF+ YTV  S+I+L+R  L++KV+   EIL V+
Sbjct: 193 IRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVL 252

Query: 283 GKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYSQFLES 342
             +P +  +L SLY+C+Y  FF + A + +++K D    PH+RYY+RE+R   YSQ LES
Sbjct: 253 HSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLES 312

Query: 343 YKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKNALYQATI 397
           Y+S+T+  MA AFGV VEFID ELSRFIAAG+LHCKIDKV  ++ETNRPDSKN  YQ TI
Sbjct: 313 YRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETI 372

[Close]

BLAST of Cp4.1LG09g09850 vs. ExPASy Swiss-Prot
Match: Q99JI4 (26S proteasome non-ATPase regulatory subunit 6 OS=Mus musculus OX=10090 GN=Psmd6 PE=1 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 5.5e-95
Identity = 188/379 (49.60%), Postives = 265/379 (69.92%), Query Frame = 0


Query: 43  QQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLLDLDRNVL 102
           + P L +A   FLL+ P+ +    V  REE++A+V+ ++MAP YEAL  +    +D ++L
Sbjct: 13  KNPDLRIAQLRFLLSLPEHRGDAAV--REELMAAVRENNMAPYYEALCKSLDWQMDVDLL 72

Query: 103 DSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQLKVTESK 162
             M+  NEEELK+LDE++ DAE+NLGESE+R+A +AK+ +  +IGDK+ AL   + T  K
Sbjct: 73  SKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCQIGDKEGALTAFRKTYDK 132

Query: 163 TVAVGLKMDLVFHTLQLGFFYMDFDLISKS-------------------------LYCMS 222
           TVA+G ++D+VF+ L++G FYMD DLI+++                         LYC++
Sbjct: 133 TVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVA 192

Query: 223 TRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVI 282
            R+FK+AA LFLD++STFT+YEL  Y TF+ YTV  S+I+L+R  L++KV+   EIL V+
Sbjct: 193 IRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVL 252

Query: 283 GKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYSQFLES 342
             +P +  +L SLY+C+Y  FF + A + +++K D    PH+RYY+RE+R   YSQ LES
Sbjct: 253 HSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLES 312

Query: 343 YKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKNALYQATI 397
           Y+S+T+  MA AFGV V+FID ELSRFIAAG+LHCKIDKV  ++ETNRPDSKN  YQ TI
Sbjct: 313 YRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETI 372

[Close]

BLAST of Cp4.1LG09g09850 vs. ExPASy Swiss-Prot
Match: Q3T0B2 (26S proteasome non-ATPase regulatory subunit 6 OS=Bos taurus OX=9913 GN=PSMD6 PE=2 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 2.1e-94
Identity = 188/379 (49.60%), Postives = 265/379 (69.92%), Query Frame = 0


Query: 43  QQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLLDLDRNVL 102
           + P L +A   FLL+ P+ +    V  R+E++A+V+ ++MAP YEAL  +    +D ++L
Sbjct: 13  KNPDLRIAQLRFLLSLPEHRGDAAV--RDELMAAVRDNNMAPYYEALCKSLEWQMDVDLL 72

Query: 103 DSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQLKVTESK 162
           + M+  NE+ELK+LDE++ DAE+NLGESE+R+A +AK+ +  RIGDK+ AL   + T  K
Sbjct: 73  NKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRRTYDK 132

Query: 163 TVAVGLKMDLVFHTLQLGFFYMDFDLISKS-------------------------LYCMS 222
           TVA+G ++D+VF+ L++G FYMD DLI+++                         LYC++
Sbjct: 133 TVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVA 192

Query: 223 TRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVI 282
            R+FK+AA LFLD++STFT+YEL  Y TF+ YTV  S+I+L+R  L++KV+   EIL V+
Sbjct: 193 IRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVL 252

Query: 283 GKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYSQFLES 342
             +P +  +L SLY+C+Y  FF + A + +++K D    PH+RYY+RE+R   YSQ LES
Sbjct: 253 HSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLES 312

Query: 343 YKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKNALYQATI 397
           Y+S+T+  MA AFGV VEFID ELSRFIAAG+LHCKIDKV  V+ETNRPDSKN  YQ TI
Sbjct: 313 YRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEVVETNRPDSKNWQYQETI 372

[Close]

BLAST of Cp4.1LG09g09850 vs. NCBI nr
Match: XP_023542699.1 (26S proteasome non-ATPase regulatory subunit 6 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 675 bits (1741), Expect = 6.86e-243
Identity = 361/386 (93.52%), Postives = 361/386 (93.52%), Query Frame = 0


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL
Sbjct: 1   MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ
Sbjct: 61  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKSIEKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV
Sbjct: 241 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN
Sbjct: 301 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 360

[Close]

BLAST of Cp4.1LG09g09850 vs. NCBI nr
Match: KAG6573108.1 (26S proteasome non-ATPase regulatory subunit 6-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 670 bits (1728), Expect = 6.56e-241
Identity = 358/386 (92.75%), Postives = 361/386 (93.52%), Query Frame = 0


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHLVL++KLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL
Sbjct: 1   MEGQEGTQQPHLVLSHKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           DLDR+VLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ
Sbjct: 61  DLDRSVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKSIEKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV
Sbjct: 241 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN
Sbjct: 301 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 360

[Close]

BLAST of Cp4.1LG09g09850 vs. NCBI nr
Match: XP_022954822.1 (26S proteasome non-ATPase regulatory subunit 6 homolog [Cucurbita moschata])

HSP 1 Score: 669 bits (1725), Expect = 1.88e-240
Identity = 357/386 (92.49%), Postives = 361/386 (93.52%), Query Frame = 0


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHLVL++KLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL
Sbjct: 1   MEGQEGTQQPHLVLSHKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           DLDR+VLDSMRAKN+EELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ
Sbjct: 61  DLDRSVLDSMRAKNDEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKSIEKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV
Sbjct: 241 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN
Sbjct: 301 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 360

[Close]

BLAST of Cp4.1LG09g09850 vs. NCBI nr
Match: XP_022994158.1 (26S proteasome non-ATPase regulatory subunit 6 [Cucurbita maxima])

HSP 1 Score: 666 bits (1718), Expect = 2.19e-239
Identity = 355/386 (91.97%), Postives = 359/386 (93.01%), Query Frame = 0


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHLVLA+KLFLLTHPDVQDIEKVNLREEVLASVKADDM PLYEALTGNSLL
Sbjct: 1   MEGQEGTQQPHLVLAHKLFLLTHPDVQDIEKVNLREEVLASVKADDMVPLYEALTGNSLL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           DLDR+VLDSMR KNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ
Sbjct: 61  DLDRSVLDSMRGKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKSIEKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGKVPYLSDFLNSLYDC+YKSFFSAFAGLTEQIKLDRYLHPHFRYYMRE+RTVV
Sbjct: 241 PEILTVIGKVPYLSDFLNSLYDCRYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREIRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN
Sbjct: 301 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 360

[Close]

BLAST of Cp4.1LG09g09850 vs. NCBI nr
Match: XP_038893563.1 (26S proteasome non-ATPase regulatory subunit 6 homolog [Benincasa hispida])

HSP 1 Score: 659 bits (1699), Expect = 1.71e-236
Identity = 352/386 (91.19%), Postives = 357/386 (92.49%), Query Frame = 0


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHLVLA+KLFLLTHPDVQDIEKV L EEVLASVKADDMAPLYE LTGNSLL
Sbjct: 1   MEGQEGTQQPHLVLAHKLFLLTHPDVQDIEKVRLTEEVLASVKADDMAPLYETLTGNSLL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           DLDR+VLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLF+IRIGDKD+ALEQ
Sbjct: 61  DLDRSVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFYIRIGDKDKALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV
Sbjct: 241 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTI+AMA AFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN
Sbjct: 301 YSQFLESYKSVTIEAMAKAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 360

[Close]

BLAST of Cp4.1LG09g09850 vs. ExPASy TrEMBL
Match: A0A6J1GRY7 (26S proteasome non-ATPase regulatory subunit 6 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456967 PE=4 SV=1)

HSP 1 Score: 669 bits (1725), Expect = 9.09e-241
Identity = 357/386 (92.49%), Postives = 361/386 (93.52%), Query Frame = 0


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHLVL++KLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL
Sbjct: 1   MEGQEGTQQPHLVLSHKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           DLDR+VLDSMRAKN+EELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ
Sbjct: 61  DLDRSVLDSMRAKNDEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKSIEKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV
Sbjct: 241 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN
Sbjct: 301 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 360

[Close]

BLAST of Cp4.1LG09g09850 vs. ExPASy TrEMBL
Match: A0A6J1K4D5 (26S proteasome non-ATPase regulatory subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC111489981 PE=4 SV=1)

HSP 1 Score: 666 bits (1718), Expect = 1.06e-239
Identity = 355/386 (91.97%), Postives = 359/386 (93.01%), Query Frame = 0


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHLVLA+KLFLLTHPDVQDIEKVNLREEVLASVKADDM PLYEALTGNSLL
Sbjct: 1   MEGQEGTQQPHLVLAHKLFLLTHPDVQDIEKVNLREEVLASVKADDMVPLYEALTGNSLL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           DLDR+VLDSMR KNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ
Sbjct: 61  DLDRSVLDSMRGKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKSIEKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGKVPYLSDFLNSLYDC+YKSFFSAFAGLTEQIKLDRYLHPHFRYYMRE+RTVV
Sbjct: 241 PEILTVIGKVPYLSDFLNSLYDCRYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREIRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN
Sbjct: 301 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 360

[Close]

BLAST of Cp4.1LG09g09850 vs. ExPASy TrEMBL
Match: A0A6J1CAI0 (26S proteasome non-ATPase regulatory subunit 6 homolog OS=Momordica charantia OX=3673 GN=LOC111008928 PE=4 SV=1)

HSP 1 Score: 656 bits (1693), Expect = 6.80e-236
Identity = 351/386 (90.93%), Postives = 356/386 (92.23%), Query Frame = 0


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHLVLA+KLFLLTHPDVQDIEKV LREEVLASVKADDMAPLYE L  NSLL
Sbjct: 1   MEGQEGTQQPHLVLAHKLFLLTHPDVQDIEKVRLREEVLASVKADDMAPLYETLIANSLL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           DLDR+VLDSMRAKNEEEL+KLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKD+ALEQ
Sbjct: 61  DLDRSVLDSMRAKNEEELRKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDKALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV
Sbjct: 241 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTI+AMA AFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN
Sbjct: 301 YSQFLESYKSVTIEAMAKAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 360

[Close]

BLAST of Cp4.1LG09g09850 vs. ExPASy TrEMBL
Match: A0A6J1KJC5 (26S proteasome non-ATPase regulatory subunit 6 homolog OS=Cucurbita maxima OX=3661 GN=LOC111495143 PE=4 SV=1)

HSP 1 Score: 655 bits (1690), Expect = 1.95e-235
Identity = 351/386 (90.93%), Postives = 356/386 (92.23%), Query Frame = 0


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHLVLA+KLFLLTHPDVQDIEKV L EEVLASVKADDMAPLYE LTG+SLL
Sbjct: 1   MEGQEGTQQPHLVLAHKLFLLTHPDVQDIEKVRLTEEVLASVKADDMAPLYETLTGSSLL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           DLDR+VLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ
Sbjct: 61  DLDRSVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYC+STRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCLSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV
Sbjct: 241 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTI+AMA AFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN
Sbjct: 301 YSQFLESYKSVTIEAMAKAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 360

[Close]

BLAST of Cp4.1LG09g09850 vs. ExPASy TrEMBL
Match: A0A6J1E761 (26S proteasome non-ATPase regulatory subunit 6 homolog OS=Cucurbita moschata OX=3662 GN=LOC111431410 PE=4 SV=1)

HSP 1 Score: 655 bits (1690), Expect = 1.95e-235
Identity = 351/386 (90.93%), Postives = 356/386 (92.23%), Query Frame = 0


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHLVLA+KLFLLTHPDVQDIEKV L EEVLASVKADDMAPLYE LTG+SLL
Sbjct: 1   MEGQEGTQQPHLVLAHKLFLLTHPDVQDIEKVRLTEEVLASVKADDMAPLYETLTGSSLL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           DLDR+VLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ
Sbjct: 61  DLDRSVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYC+STRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCLSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV
Sbjct: 241 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTI+AMA AFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN
Sbjct: 301 YSQFLESYKSVTIEAMAKAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 360

[Close]

BLAST of Cp4.1LG09g09850 vs. TAIR 10
Match: AT4G24820.1 (26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain )

HSP 1 Score: 582.0 bits (1499), Expect = 3.6e-166
Identity = 301/384 (78.39%), Postives = 338/384 (88.02%), Query Frame = 0


Query: 38  GQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLLDL 97
           G EG+QQPHL+LANKLFLLTHPDV DIEKV L+ EVL  +++  MAPLYE L  +S+LDL
Sbjct: 4   GAEGSQQPHLILANKLFLLTHPDVPDIEKVQLKSEVLDFIRSHGMAPLYETLIASSVLDL 63

Query: 98  DRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQLK 157
           D+++L+SMRA NEEELKKLDEKIADAEENLGESEVREAHLAK+L+FIRI DK++ALEQLK
Sbjct: 64  DQSLLESMRAANEEELKKLDEKIADAEENLGESEVREAHLAKALYFIRISDKEKALEQLK 123

Query: 158 VTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS------------------------- 217
           +TE KTVAVG KMD+VF+TLQL FFYMDFDL+SKS                         
Sbjct: 124 LTEGKTVAVGQKMDVVFYTLQLAFFYMDFDLVSKSIDKAKKLFEEGGDWERKNRLKVYEG 183

Query: 218 LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPE 277
           LYCMSTRNFKKAA+LFLDSISTFTTYE+FPY+TFIFYTVLTSII+LDRVSLKQKVVDAPE
Sbjct: 184 LYCMSTRNFKKAASLFLDSISTFTTYEIFPYETFIFYTVLTSIITLDRVSLKQKVVDAPE 243

Query: 278 ILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYS 337
           ILTV+GK+P+LS+FLNSLY+CQYK+FFSAFAG+  QIK DRYL+PHFR+YMREVRTVVYS
Sbjct: 244 ILTVLGKIPFLSEFLNSLYECQYKAFFSAFAGMAVQIKYDRYLYPHFRFYMREVRTVVYS 303

Query: 338 QFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKNAL 397
           QFLESYKSVT++AMA AFGVSV+FID ELSRFIAAGKLHCKIDKVAGVLETNRPD+KNAL
Sbjct: 304 QFLESYKSVTVEAMAKAFGVSVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDAKNAL 363

[Close]

BLAST of Cp4.1LG09g09850 vs. TAIR 10
Match: AT4G24820.2 (26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain )

HSP 1 Score: 582.0 bits (1499), Expect = 3.6e-166
Identity = 301/384 (78.39%), Postives = 338/384 (88.02%), Query Frame = 0


Query: 38  GQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLLDL 97
           G EG+QQPHL+LANKLFLLTHPDV DIEKV L+ EVL  +++  MAPLYE L  +S+LDL
Sbjct: 4   GAEGSQQPHLILANKLFLLTHPDVPDIEKVQLKSEVLDFIRSHGMAPLYETLIASSVLDL 63

Query: 98  DRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQLK 157
           D+++L+SMRA NEEELKKLDEKIADAEENLGESEVREAHLAK+L+FIRI DK++ALEQLK
Sbjct: 64  DQSLLESMRAANEEELKKLDEKIADAEENLGESEVREAHLAKALYFIRISDKEKALEQLK 123

Query: 158 VTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS------------------------- 217
           +TE KTVAVG KMD+VF+TLQL FFYMDFDL+SKS                         
Sbjct: 124 LTEGKTVAVGQKMDVVFYTLQLAFFYMDFDLVSKSIDKAKKLFEEGGDWERKNRLKVYEG 183

Query: 218 LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPE 277
           LYCMSTRNFKKAA+LFLDSISTFTTYE+FPY+TFIFYTVLTSII+LDRVSLKQKVVDAPE
Sbjct: 184 LYCMSTRNFKKAASLFLDSISTFTTYEIFPYETFIFYTVLTSIITLDRVSLKQKVVDAPE 243

Query: 278 ILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYS 337
           ILTV+GK+P+LS+FLNSLY+CQYK+FFSAFAG+  QIK DRYL+PHFR+YMREVRTVVYS
Sbjct: 244 ILTVLGKIPFLSEFLNSLYECQYKAFFSAFAGMAVQIKYDRYLYPHFRFYMREVRTVVYS 303

Query: 338 QFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKNAL 397
           QFLESYKSVT++AMA AFGVSV+FID ELSRFIAAGKLHCKIDKVAGVLETNRPD+KNAL
Sbjct: 304 QFLESYKSVTVEAMAKAFGVSVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDAKNAL 363

[Close]

BLAST of Cp4.1LG09g09850 vs. TAIR 10
Match: AT3G61140.1 (26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain )

HSP 1 Score: 78.6 bits (192), Expect = 1.3e-14
Identity = 53/189 (28.04%), Postives = 85/189 (44.97%), Query Frame = 0


Query: 196 MSTRNFKKAANLFLD---SISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPE 255
           +  + +K AA  FLD    +       + P D    Y  L ++ S DR  LKQKV+D   
Sbjct: 226 LELKKYKLAARKFLDVNPELGNSYNEVIAPQD-IATYGGLCALASFDRSELKQKVIDNIN 285

Query: 256 ILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYS 315
               +  VP + + +N  Y  +Y S     A L   + LD +LH H      ++R     
Sbjct: 286 FRNFLELVPDVRELINDFYSSRYASCLEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALI 345

Query: 316 QFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKNAL 375
           Q+   + SV +  MA+AF  SV  ++ EL   I   ++  +ID    +L     D +NA 
Sbjct: 346 QYTLPFVSVDLSRMADAFKTSVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNAT 405

Query: 376 YQATIKQGD 382
           +Q  ++ G+
Sbjct: 406 FQKVLQMGN 413

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g09850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Y35	5.0e-165	78.39	26S proteasome non-ATPase regulatory subunit 6 homolog OS=Arabidopsis thaliana O...	[more]
Q8W425	4.7e-163	78.13	26S proteasome non-ATPase regulatory subunit 6 OS=Oryza sativa subsp. japonica O...	[more]
Q15008	3.2e-95	49.60	26S proteasome non-ATPase regulatory subunit 6 OS=Homo sapiens OX=9606 GN=PSMD6 ...	[more]
Q99JI4	5.5e-95	49.60	26S proteasome non-ATPase regulatory subunit 6 OS=Mus musculus OX=10090 GN=Psmd6...	[more]
Q3T0B2	2.1e-94	49.60	26S proteasome non-ATPase regulatory subunit 6 OS=Bos taurus OX=9913 GN=PSMD6 PE...	[more]

BLAST of Cp4.1LG09g09850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542699.1	6.86e-243	93.52	26S proteasome non-ATPase regulatory subunit 6 homolog [Cucurbita pepo subsp. pe...	[more]
KAG6573108.1	6.56e-241	92.75	26S proteasome non-ATPase regulatory subunit 6-like protein, partial [Cucurbita ...	[more]
XP_022954822.1	1.88e-240	92.49	26S proteasome non-ATPase regulatory subunit 6 homolog [Cucurbita moschata]	[more]
XP_022994158.1	2.19e-239	91.97	26S proteasome non-ATPase regulatory subunit 6 [Cucurbita maxima]	[more]
XP_038893563.1	1.71e-236	91.19	26S proteasome non-ATPase regulatory subunit 6 homolog [Benincasa hispida]	[more]

BLAST of Cp4.1LG09g09850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GRY7	9.09e-241	92.49	26S proteasome non-ATPase regulatory subunit 6 homolog OS=Cucurbita moschata OX=...	[more]
A0A6J1K4D5	1.06e-239	91.97	26S proteasome non-ATPase regulatory subunit 6 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1CAI0	6.80e-236	90.93	26S proteasome non-ATPase regulatory subunit 6 homolog OS=Momordica charantia OX...	[more]
A0A6J1KJC5	1.95e-235	90.93	26S proteasome non-ATPase regulatory subunit 6 homolog OS=Cucurbita maxima OX=36...	[more]
A0A6J1E761	1.95e-235	90.93	26S proteasome non-ATPase regulatory subunit 6 homolog OS=Cucurbita moschata OX=...	[more]

BLAST of Cp4.1LG09g09850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24820.1	3.6e-166	78.39	26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain	[more]
AT4G24820.2	3.6e-166	78.39	26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain	[more]
AT3G61140.1	1.3e-14	28.04	26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 99..133
None	No IPR available	SMART	SM00753	PINT	coord: 297..380 e-value: 4.1E-21 score: 86.1
None	No IPR available	GENE3D	1.25.40.570		coord: 190..347 e-value: 9.0E-43 score: 148.6 coord: 41..189 e-value: 5.4E-8 score: 34.3
None	No IPR available	PANTHER	PTHR14145:SF6	BNAC08G11800D PROTEIN	coord: 192..396
None	No IPR available	PANTHER	PTHR14145:SF6	BNAC08G11800D PROTEIN	coord: 38..193
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 297..380 e-value: 4.1E-21 score: 86.1
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 263..364 e-value: 3.1E-15 score: 56.6
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 200..368 score: 23.699781
IPR045135	26S proteasome regulatory subunit Rpn7, N-terminal	PFAM	PF10602	RPN7	coord: 98..192 e-value: 3.8E-23 score: 82.1
IPR019585	26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1	PANTHER	PTHR14145	26S PROTESOME SUBUNIT 6	coord: 38..193
IPR019585	26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1	PANTHER	PTHR14145	26S PROTESOME SUBUNIT 6	coord: 192..396
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 292..373

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g09850.1	Cp4.1LG09g09850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000502	proteasome complex