Cp4.1LG09g09550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATAATAAATTACAGGCATTTTTCTGGTGAGGATCTCGAACCGTTGACAGTTAAGGAGTTAAAACGGTTAGAGAGACAACTAAGCGTCGGAATCGAACGTGTCCGCTCTAAAATGGTAAATCGTAGCTAATAAATCCTTAAATTAAATAATTTAAAAATTTATTAAACACTTTCTAAATTTTATTTTCGACAGAGACGAATTATATCAGAACATACAAATCAGCTCAAGAAGAAGGTAAAATCATCGATTTTTACTTCGAGATTCTTATCAGTTATAGTTATAAAAATTAACTGTTGGGTTAAATTAAAATTTACTGCAGTATAAGGGTCTGCAAGAGGAGCATAGCCGTCTGCAGAAGAGAGTAAAAAATTTTCCAAAATTTACCTCTAGAATTAATTTTACCATACTTTTATTTATTATTTATTATTTATTTAATGTTTTATGTATTTTCAGCTGAACCAGCTTAAGGATGTGGCTGACACGACCGCAAAAGTCTCAGATGCTGATGGTGTCTCAGTACTCGAAATGTTTGTATAA ATAATAAATTACAGGCATTTTTCTGGTGAGGATCTCGAACCGTTGACAGTTAAGGAGTTAAAACGGTTAGAGAGACAACTAAGCGTCGGAATCGAACGTGTCCGCTCTAAAATGAGACGAATTATATCAGAACATACAAATCAGCTCAAGAAGAAGTATAAGGGTCTGCAAGAGGAGCATAGCCGTCTGCAGAAGAGACTGAACCAGCTTAAGGATGTGGCTGACACGACCGCAAAAGTCTCAGATGCTGATGGTGTCTCAGTACTCGAAATGTTTGTATAA ATAATAAATTACAGGCATTTTTCTGGTGAGGATCTCGAACCGTTGACAGTTAAGGAGTTAAAACGGTTAGAGAGACAACTAAGCGTCGGAATCGAACGTGTCCGCTCTAAAATGAGACGAATTATATCAGAACATACAAATCAGCTCAAGAAGAAGTATAAGGGTCTGCAAGAGGAGCATAGCCGTCTGCAGAAGAGACTGAACCAGCTTAAGGATGTGGCTGACACGACCGCAAAAGTCTCAGATGCTGATGGTGTCTCAGTACTCGAAATGTTTGTATAA IINYRHFSGEDLEPLTVKELKRLERQLSVGIERVRSKMRRIISEHTNQLKKKYKGLQEEHSRLQKRLNQLKDVADTTAKVSDADGVSVLEMFV Homology
BLAST of Cp4.1LG09g09550 vs. ExPASy Swiss-Prot
Match: Q39081 (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana OX=3702 GN=CAL PE=1 SV=3) HSP 1 Score: 62.8 bits (151), Expect = 2.4e-09 Identity = 28/74 (37.84%), Postives = 54/74 (72.97%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. ExPASy Swiss-Prot
Match: D7KQR8 (Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=CAL PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 7.0e-09 Identity = 28/74 (37.84%), Postives = 52/74 (70.27%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. ExPASy Swiss-Prot
Match: D7SMN6 (Agamous-like MADS-box protein FUL-L OS=Vitis vinifera OX=29760 GN=FULL PE=2 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.2e-08 Identity = 28/71 (39.44%), Postives = 52/71 (73.24%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. ExPASy Swiss-Prot
Match: Q39375 (Transcription factor CAULIFLOWER OS=Brassica oleracea var. italica OX=36774 GN=CAL PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.0e-08 Identity = 29/80 (36.25%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. ExPASy Swiss-Prot
Match: Q6R4S6 (Transcription factor CAULIFLOWER OS=Brassica rapa subsp. chinensis OX=93385 GN=CAL PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.0e-08 Identity = 29/80 (36.25%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. NCBI nr
Match: XP_023542775.1 (truncated transcription factor CAULIFLOWER D-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 166 bits (421), Expect = 3.92e-50 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. NCBI nr
Match: XP_022955225.1 (truncated transcription factor CAULIFLOWER D-like [Cucurbita moschata]) HSP 1 Score: 161 bits (408), Expect = 3.70e-48 Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. NCBI nr
Match: KAG6573136.1 (MADS-box transcription factor 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 161 bits (408), Expect = 3.70e-48 Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. NCBI nr
Match: XP_022994475.1 (truncated transcription factor CAULIFLOWER D-like [Cucurbita maxima]) HSP 1 Score: 159 bits (403), Expect = 2.12e-47 Identity = 83/89 (93.26%), Postives = 88/89 (98.88%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. NCBI nr
Match: KAG7012321.1 (MADS-box transcription factor 6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 149 bits (377), Expect = 2.66e-43 Identity = 81/87 (93.10%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. ExPASy TrEMBL
Match: A0A6J1GUK4 (truncated transcription factor CAULIFLOWER D-like OS=Cucurbita moschata OX=3662 GN=LOC111457252 PE=4 SV=1) HSP 1 Score: 161 bits (408), Expect = 1.79e-48 Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. ExPASy TrEMBL
Match: A0A6J1K1A3 (truncated transcription factor CAULIFLOWER D-like OS=Cucurbita maxima OX=3661 GN=LOC111490186 PE=4 SV=1) HSP 1 Score: 159 bits (403), Expect = 1.03e-47 Identity = 83/89 (93.26%), Postives = 88/89 (98.88%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. ExPASy TrEMBL
Match: A0A6J1KKG0 (MADS-box transcription factor 6-like OS=Cucurbita maxima OX=3661 GN=LOC111495387 PE=4 SV=1) HSP 1 Score: 128 bits (322), Expect = 2.37e-35 Identity = 66/87 (75.86%), Postives = 78/87 (89.66%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. ExPASy TrEMBL
Match: A0A1S3B0H5 (transcription factor CAULIFLOWER-like OS=Cucumis melo OX=3656 GN=LOC103484527 PE=4 SV=1) HSP 1 Score: 124 bits (311), Expect = 8.21e-35 Identity = 66/88 (75.00%), Postives = 77/88 (87.50%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. ExPASy TrEMBL
Match: A0A5A7UJH6 (Transcription factor CAULIFLOWER D-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004780 PE=4 SV=1) HSP 1 Score: 124 bits (311), Expect = 8.77e-34 Identity = 66/88 (75.00%), Postives = 77/88 (87.50%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. TAIR 10
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 62.8 bits (151), Expect = 1.7e-10 Identity = 28/74 (37.84%), Postives = 54/74 (72.97%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. TAIR 10
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 58.2 bits (139), Expect = 4.2e-09 Identity = 26/71 (36.62%), Postives = 50/71 (70.42%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. TAIR 10
Match: AT5G60910.1 (AGAMOUS-like 8 ) HSP 1 Score: 52.0 bits (123), Expect = 3.0e-07 Identity = 27/67 (40.30%), Postives = 45/67 (67.16%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. TAIR 10
Match: AT5G60910.2 (AGAMOUS-like 8 ) HSP 1 Score: 52.0 bits (123), Expect = 3.0e-07 Identity = 27/67 (40.30%), Postives = 45/67 (67.16%), Query Frame = 0
BLAST of Cp4.1LG09g09550 vs. TAIR 10
Match: AT3G30260.1 (AGAMOUS-like 79 ) HSP 1 Score: 44.3 bits (103), Expect = 6.3e-05 Identity = 22/68 (32.35%), Postives = 44/68 (64.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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