Cp4.1LG09g09300 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g09300
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	PLATZ transcription factor family protein
Location	Cp4.1LG09: 8380164 .. 8382165 (+)
RNA-Seq Expression	Cp4.1LG09g09300
Synteny	Cp4.1LG09g09300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCACTCACACTCTCAAACAAACAAACAAAAAAAAAAAACCCCAAAACCCTCTTGAATTCCTCTAACAACATACAAATCTCCCTTCTCCACTCTCCAATTTGAATCAAAACCAACCGGATATGACCAAAACTAGCTGTGTTCTTGCTTGGACATCGCCGACGTGATGATCATCAACCATTGTGGCGCTGCCATGGCCGCCAAGCCTGCATGGCTTCAGGCCCTCATGGCCGAGACCTTCTTTGGCACTTGTTTGCTTCATGAAAACCGCCGGAAGTCCGAGAAGAATGTGTTTTGTTTGCATTGTTGTCTTAGTATTTGTCCTCACTGCCTCTCTTCTCACCGTGCTCATCCTCTTCTTCAGGTATTCATCTATTTGATTTTGTTCTTGATTTTTCATGGGTTTTTCACTAATTTTAATGGGGTTTTCGTAATTTTTAATGGGTTTTTGCAAAATTTGTTCTTGATTTGATGGGTTTTTCATGAATTTTAATGGGGTTTTCTCAAAATTTGGTCTTTTTTTGGGGGTGGAAACTTATCCAACTTTTGAGATTTGGTTGGGTTCCTATTCGTGGATGACTCCATTTTTATCCAATCTTCCTGCCAGAGCTCTCTCAGTTGTTGCTTTCGCTAAACTTTTGTCCGTTAGGAATTACGATTCTCGACATAAGCTCTCGTGGGTTTGCTTTTGATTTTCCCAAAGATCTTATACTAATGGAGAATGTATTTTTACTTATAAACTCATGATCTAACCCTATAATTAGCTTAAGTGGGACATACTTTTACTAAATTCTTGTCTTTTAGGAACTACAACCTTACACACGATGACAGGATATTGTCGTGATTTTGATTTTAGTTTTTCGAAAAGGTCTTATTAATAGAGATTTATTGCTTACTTATAAATCTATGATCAACTCCTTAATTAATTAAAGTGGGACACGCTTTCATGTCTCATAGGAACTACGATGGTTCGCATAAGTTTTCATAGCTTTACTTTAGATTCTCCATAAGCCTTCATACCTTAATACCAATAGAGATAGTATAGTCCACATGGAACTCTTCTCCCAACAATCCTCTACATTGTCTACTAATTTTGAGATTACAATCCTGATTAACAACGGATTAAATGAAATGGGTTTGTGTTTATCAGGTTAGACGATACGTTTACCACGACGTAATTCGATTGGGCGATCTCGAAAAGCTCATAGACTGTTCCCATATTCAGGTAAATTCTCTTCCAATCCAAATTTAACAAATTGGGTTATGATAATTAACCATAAAGTTCCAATCTTTGCAGCCCTACACCATAAACGGAGCCAAAGTTATATTCTTGAATTACAGGCCACAATCAAGGCCATGCAAACAAGGCTCATCAAACGCTTGCTTCACCTGCGACAGAATTCTCCAAGAACCCTTCCATTTTTGCTCTCTTTCTTGCAAAGTGGATCACATGGTGTTCCAAGGCCAAGATTTATGCGAGATTCTCCACAGGTTCGACGAGTCCGATTTCTCTTACTCCCAATTCGAATCCCTTCGAATGGACGGACTAGAGGGTATCGACGACGACGCCGCCGCTGCCGCCGCCGGCGGCTGCGGCGGCACACCGAATTCCATGGTGGAAGAACCACCGCAGTTCAACAAAGCCTCGTCTTGCTCGGAGGGTACTCATATCTTTAAAAGAAAGAACAAAGGCACTGATTTTCTTCCCGCCGGCATCGTTTTGTCGCTCAGTAGTAGAAGGAAGGGCGCCCCTCAAAGGGCGCCGCTTTCTTGAGGGCGGAATTTGGTGTTTTTATTAATGAACAATTTTTGAAAATGAAATGAATAATTTGTTGTCGGCGGCGTTTGGGTTTTCCGGTAAGGGTTTGGCAAGTGAATTACACGGCGGTGGGCGGTGGGTGGTGGTGATCGGAGTGTTTCCGATGTGGGATATTTCTATTTAGGCTCACCAATTTTGTGTTAATTCGTGTAATTTATTGGAACTTGCACGTAAATTATATAT

mRNA sequence

AAATCACTCACACTCTCAAACAAACAAACAAAAAAAAAAAACCCCAAAACCCTCTTGAATTCCTCTAACAACATACAAATCTCCCTTCTCCACTCTCCAATTTGAATCAAAACCAACCGGATATGACCAAAACTAGCTGTGTTCTTGCTTGGACATCGCCGACGTGATGATCATCAACCATTGTGGCGCTGCCATGGCCGCCAAGCCTGCATGGCTTCAGGCCCTCATGGCCGAGACCTTCTTTGGCACTTGTTTGCTTCATGAAAACCGCCGGAAGTCCGAGAAGAATGTGTTTTGTTTGCATTGTTGTCTTAGTATTTGTCCTCACTGCCTCTCTTCTCACCGTGCTCATCCTCTTCTTCAGGTTAGACGATACGTTTACCACGACGTAATTCGATTGGGCGATCTCGAAAAGCTCATAGACTGTTCCCATATTCAGCCCTACACCATAAACGGAGCCAAAGTTATATTCTTGAATTACAGGCCACAATCAAGGCCATGCAAACAAGGCTCATCAAACGCTTGCTTCACCTGCGACAGAATTCTCCAAGAACCCTTCCATTTTTGCTCTCTTTCTTGCAAAGTGGATCACATGGTGTTCCAAGGCCAAGATTTATGCGAGATTCTCCACAGGTTCGACGAGTCCGATTTCTCTTACTCCCAATTCGAATCCCTTCGAATGGACGGACTAGAGGGTATCGACGACGACGCCGCCGCTGCCGCCGCCGGCGGCTGCGGCGGCACACCGAATTCCATGGTGGAAGAACCACCGCAGTTCAACAAAGCCTCGTCTTGCTCGGAGGGTACTCATATCTTTAAAAGAAAGAACAAAGGCACTGATTTTCTTCCCGCCGGCATCGTTTTGTCGCTCAGTAGTAGAAGGAAGGGCGCCCCTCAAAGGGCGCCGCTTTCTTGAGGGCGGAATTTGGTGTTTTTATTAATGAACAATTTTTGAAAATGAAATGAATAATTTGTTGTCGGCGGCGTTTGGGTTTTCCGGTAAGGGTTTGGCAAGTGAATTACACGGCGGTGGGCGGTGGGTGGTGGTGATCGGAGTGTTTCCGATGTGGGATATTTCTATTTAGGCTCACCAATTTTGTGTTAATTCGTGTAATTTATTGGAACTTGCACGTAAATTATATAT

Coding sequence (CDS)

ATGATCATCAACCATTGTGGCGCTGCCATGGCCGCCAAGCCTGCATGGCTTCAGGCCCTCATGGCCGAGACCTTCTTTGGCACTTGTTTGCTTCATGAAAACCGCCGGAAGTCCGAGAAGAATGTGTTTTGTTTGCATTGTTGTCTTAGTATTTGTCCTCACTGCCTCTCTTCTCACCGTGCTCATCCTCTTCTTCAGGTTAGACGATACGTTTACCACGACGTAATTCGATTGGGCGATCTCGAAAAGCTCATAGACTGTTCCCATATTCAGCCCTACACCATAAACGGAGCCAAAGTTATATTCTTGAATTACAGGCCACAATCAAGGCCATGCAAACAAGGCTCATCAAACGCTTGCTTCACCTGCGACAGAATTCTCCAAGAACCCTTCCATTTTTGCTCTCTTTCTTGCAAAGTGGATCACATGGTGTTCCAAGGCCAAGATTTATGCGAGATTCTCCACAGGTTCGACGAGTCCGATTTCTCTTACTCCCAATTCGAATCCCTTCGAATGGACGGACTAGAGGGTATCGACGACGACGCCGCCGCTGCCGCCGCCGGCGGCTGCGGCGGCACACCGAATTCCATGGTGGAAGAACCACCGCAGTTCAACAAAGCCTCGTCTTGCTCGGAGGGTACTCATATCTTTAAAAGAAAGAACAAAGGCACTGATTTTCTTCCCGCCGGCATCGTTTTGTCGCTCAGTAGTAGAAGGAAGGGCGCCCCTCAAAGGGCGCCGCTTTCTTGA

Protein sequence

MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDDDAAAAAAGGCGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPLS

Homology

[Close]

BLAST of Cp4.1LG09g09300 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.7e-49
Identity = 114/260 (43.85%), Postives = 153/260 (58.85%), Query Frame = 0


Query: 13  KPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRRYVY 72
           KPAWL AL AE FF  C  HE  +K+E+NV CL CC S+CPHC+ SHR H LLQVRRYVY
Sbjct: 5   KPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVY 64

Query: 73  HDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQEPFH 132
           HDV+RL DL+KLIDCS++Q YTIN AKV+F+  RPQ+R  K G+ N C +CDR LQEP+ 
Sbjct: 65  HDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFK-GAGNYCTSCDRSLQEPYI 124

Query: 133 FCSLSCKVDHMVFQGQDLCEIL---HRF--------------DESDFSYSQFESLRMDGL 192
            CSL CKVD ++ + +D+   L   H                D+   +Y    S  +DG 
Sbjct: 125 HCSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVVDGD 184

Query: 193 EGI-------DDDAAAAAAGGCGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLP 249
           E +       D++ A AAA     T + + ++   F     C++  + +K  ++  D + 
Sbjct: 185 ESMSWSSASSDNNNAGAAAAYAATTTHVVRKKRTGF---CLCAKSANSYKEVSEDPDDIS 244

[Close]

BLAST of Cp4.1LG09g09300 vs. NCBI nr
Match: XP_023542746.1 (uncharacterized protein LOC111802565 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 523 bits (1346), Expect = 1.82e-187
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR 60
           MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR
Sbjct: 1   MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR 60

Query: 61  AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC 120
           AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC
Sbjct: 61  AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC 120

Query: 121 FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDD 180
           FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDD
Sbjct: 121 FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDD 180

Query: 181 DAAAAAAGGCGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRK 240
           DAAAAAAGGCGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRK
Sbjct: 181 DAAAAAAGGCGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRK 240

Query: 241 GAPQRAPLS 249
           GAPQRAPLS
Sbjct: 241 GAPQRAPLS 249

[Close]

BLAST of Cp4.1LG09g09300 vs. NCBI nr
Match: KAG6573162.1 (hypothetical protein SDJN03_27049, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 518 bits (1334), Expect = 1.28e-185
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0


Query: 1   MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR 60
           MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR
Sbjct: 1   MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR 60

Query: 61  AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC 120
           AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC
Sbjct: 61  AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC 120

Query: 121 FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDD 180
           FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDD
Sbjct: 121 FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDD 180

Query: 181 DAAAAAAGG-CGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRR 240
           DAAAAAAGG CGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRR
Sbjct: 181 DAAAAAAGGGCGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRR 240

Query: 241 KGAPQRAPLS 249
           KGAPQRAPLS
Sbjct: 241 KGAPQRAPLS 250

[Close]

BLAST of Cp4.1LG09g09300 vs. NCBI nr
Match: XP_022954838.1 (uncharacterized protein LOC111456982 [Cucurbita moschata])

HSP 1 Score: 516 bits (1328), Expect = 1.01e-184
Identity = 246/249 (98.80%), Postives = 247/249 (99.20%), Query Frame = 0


Query: 1   MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR 60
           MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR
Sbjct: 1   MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR 60

Query: 61  AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC 120
           AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC
Sbjct: 61  AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC 120

Query: 121 FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDD 180
           FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDD
Sbjct: 121 FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDD 180

Query: 181 DAAAAAAGGCGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRK 240
           +AAAAAAG CGGTPNSMVEEP QFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRK
Sbjct: 181 EAAAAAAGSCGGTPNSMVEEPQQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRK 240

Query: 241 GAPQRAPLS 249
           GAPQRAPLS
Sbjct: 241 GAPQRAPLS 249

[Close]

BLAST of Cp4.1LG09g09300 vs. NCBI nr
Match: KAG7012346.1 (hypothetical protein SDJN02_25098, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 499 bits (1285), Expect = 2.72e-178
Identity = 240/241 (99.59%), Postives = 240/241 (99.59%), Query Frame = 0


Query: 10  MAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRR 69
           MAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRR
Sbjct: 1   MAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRR 60

Query: 70  YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE 129
           YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE
Sbjct: 61  YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE 120

Query: 130 PFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDDDAAAAAAGG 189
           PFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDDDAAAAAAGG
Sbjct: 121 PFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDDDAAAAAAGG 180

Query: 190 -CGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPL 249
            CGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPL
Sbjct: 181 GCGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPL 240

[Close]

BLAST of Cp4.1LG09g09300 vs. NCBI nr
Match: XP_022994454.1 (uncharacterized protein LOC111490171 [Cucurbita maxima])

HSP 1 Score: 495 bits (1275), Expect = 1.06e-176
Identity = 239/249 (95.98%), Postives = 240/249 (96.39%), Query Frame = 0


Query: 1   MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR 60
           MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR
Sbjct: 1   MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR 60

Query: 61  AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC 120
           AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC
Sbjct: 61  AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC 120

Query: 121 FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDD 180
           FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFE LRMDGLEGIDD
Sbjct: 121 FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFEGLRMDGLEGIDD 180

Query: 181 DAAAAAAGGCGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRK 240
           D+     GG   TPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRK
Sbjct: 181 DSG----GGGQMTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRK 240

Query: 241 GAPQRAPLS 249
           GAPQRAPLS
Sbjct: 241 GAPQRAPLS 245

[Close]

BLAST of Cp4.1LG09g09300 vs. ExPASy TrEMBL
Match: A0A6J1GS78 (uncharacterized protein LOC111456982 OS=Cucurbita moschata OX=3662 GN=LOC111456982 PE=4 SV=1)

HSP 1 Score: 516 bits (1328), Expect = 4.91e-185
Identity = 246/249 (98.80%), Postives = 247/249 (99.20%), Query Frame = 0


Query: 1   MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR 60
           MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR
Sbjct: 1   MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR 60

Query: 61  AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC 120
           AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC
Sbjct: 61  AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC 120

Query: 121 FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDD 180
           FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDD
Sbjct: 121 FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDD 180

Query: 181 DAAAAAAGGCGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRK 240
           +AAAAAAG CGGTPNSMVEEP QFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRK
Sbjct: 181 EAAAAAAGSCGGTPNSMVEEPQQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRK 240

Query: 241 GAPQRAPLS 249
           GAPQRAPLS
Sbjct: 241 GAPQRAPLS 249

[Close]

BLAST of Cp4.1LG09g09300 vs. ExPASy TrEMBL
Match: A0A6J1K2W5 (uncharacterized protein LOC111490171 OS=Cucurbita maxima OX=3661 GN=LOC111490171 PE=4 SV=1)

HSP 1 Score: 495 bits (1275), Expect = 5.11e-177
Identity = 239/249 (95.98%), Postives = 240/249 (96.39%), Query Frame = 0


Query: 1   MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR 60
           MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR
Sbjct: 1   MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR 60

Query: 61  AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC 120
           AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC
Sbjct: 61  AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNAC 120

Query: 121 FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDD 180
           FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFE LRMDGLEGIDD
Sbjct: 121 FTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFEGLRMDGLEGIDD 180

Query: 181 DAAAAAAGGCGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRK 240
           D+     GG   TPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRK
Sbjct: 181 DSG----GGGQMTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRK 240

Query: 241 GAPQRAPLS 249
           GAPQRAPLS
Sbjct: 241 GAPQRAPLS 245

[Close]

BLAST of Cp4.1LG09g09300 vs. ExPASy TrEMBL
Match: A0A6J1C6S4 (uncharacterized protein LOC111008916 OS=Momordica charantia OX=3673 GN=LOC111008916 PE=4 SV=1)

HSP 1 Score: 452 bits (1162), Expect = 1.71e-159
Identity = 223/266 (83.83%), Postives = 230/266 (86.47%), Query Frame = 0


Query: 1   MIINHCGA---AMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLS 60
           M+INHCG    AMA KPAWLQALMAETFFGTCLLHENRRKSEKNVFCL+CCLSICPHCL 
Sbjct: 7   MMINHCGGGGGAMAGKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLNCCLSICPHCLP 66

Query: 61  SHRAHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSS 120
           SHR+HPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSS
Sbjct: 67  SHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSS 126

Query: 121 NACFTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEG 180
           NACFTCDRILQEPFHFCSLSCKVDHMV+QG+DLC ILHRFDESDFSYSQFE LR+DGLEG
Sbjct: 127 NACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYSQFEGLRVDGLEG 186

Query: 181 IDDDAAAAAAGGCGGTPNSMVEEPPQFNKASSCSE--------------GTHIFKRKNKG 240
           IDDD           TPNS VE+P QFNKASSCS               GTHIFKRKNKG
Sbjct: 187 IDDDGQM--------TPNSGVEDPSQFNKASSCSNMSELAPTNNSVVSSGTHIFKRKNKG 246

Query: 241 TDFLPAGIVLSLSSRRKGAPQRAPLS 249
           TDFLPAGIVLSLSSRRKGAPQRAPLS
Sbjct: 247 TDFLPAGIVLSLSSRRKGAPQRAPLS 264

[Close]

BLAST of Cp4.1LG09g09300 vs. ExPASy TrEMBL
Match: A0A6J1KJX3 (uncharacterized protein LOC111495276 OS=Cucurbita maxima OX=3661 GN=LOC111495276 PE=4 SV=1)

HSP 1 Score: 432 bits (1110), Expect = 1.00e-151
Identity = 210/261 (80.46%), Postives = 223/261 (85.44%), Query Frame = 0


Query: 1   MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR 60
           M+IN CGA MAAKPAWLQALMAETFFG CLLHENRRK EKNVFCLHCCLSICPHCL SHR
Sbjct: 2   MMINQCGATMAAKPAWLQALMAETFFGACLLHENRRKCEKNVFCLHCCLSICPHCLPSHR 61

Query: 61  AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSS-NA 120
           +HPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQG+S N 
Sbjct: 62  SHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNV 121

Query: 121 CFTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGID 180
           CFTCDRILQEPFHFCSLSCKVDHMV+QG+DLC ILHRFDESDFSY+QFE LR +GL+G+D
Sbjct: 122 CFTCDRILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYTQFEGLRGEGLKGLD 181

Query: 181 DDAAAAAAGGCGGTPNSMVEEPPQFNKASSCSE-----------GTHIFKRKNKGTDFLP 240
           +D           TPNSMVE+  QFN+ SSCS            GTHIFKRKNK  DFLP
Sbjct: 182 EDGQI--------TPNSMVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKSADFLP 241

Query: 241 AGIVLSLSSRRKGAPQRAPLS 249
           AGIVLSLSSRRKGAPQR+PLS
Sbjct: 242 AGIVLSLSSRRKGAPQRSPLS 254

[Close]

BLAST of Cp4.1LG09g09300 vs. ExPASy TrEMBL
Match: A0A6J1EBG2 (uncharacterized protein LOC111431647 OS=Cucurbita moschata OX=3662 GN=LOC111431647 PE=4 SV=1)

HSP 1 Score: 431 bits (1108), Expect = 2.02e-151
Identity = 210/261 (80.46%), Postives = 223/261 (85.44%), Query Frame = 0


Query: 1   MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR 60
           M+IN CGA MAAKPAWLQALMAETFFG CLLHENRRK EKNVFCLHCCLSICPHCL SHR
Sbjct: 2   MMINQCGATMAAKPAWLQALMAETFFGACLLHENRRKCEKNVFCLHCCLSICPHCLPSHR 61

Query: 61  AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSS-NA 120
           +HPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQG+S N 
Sbjct: 62  SHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNV 121

Query: 121 CFTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGID 180
           CFTCDRILQEPFHFCSLSCKVDHMV+QG+DLC ILHRFDESDFSY+QFE LR +GL+G+D
Sbjct: 122 CFTCDRILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYAQFEGLRGEGLKGLD 181

Query: 181 DDAAAAAAGGCGGTPNSMVEEPPQFNKASSCSE-----------GTHIFKRKNKGTDFLP 240
           +D           TPNSMVE+  QFN+ SSCS            GTHIFKRKNK  DFLP
Sbjct: 182 EDGQI--------TPNSMVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLP 241

Query: 241 AGIVLSLSSRRKGAPQRAPLS 249
           AGIVLSLSSRRKGAPQR+PLS
Sbjct: 242 AGIVLSLSSRRKGAPQRSPLS 254

[Close]

BLAST of Cp4.1LG09g09300 vs. TAIR 10
Match: AT1G31040.1 (PLATZ transcription factor family protein )

HSP 1 Score: 288.1 bits (736), Expect = 6.7e-78
Identity = 149/240 (62.08%), Postives = 175/240 (72.92%), Query Frame = 0


Query: 10  MAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRR 69
           MA KPAWL+ LMAETFF +C +HE RRKSEKNVFCL CCLS+CPHCL SHR+HPLLQVRR
Sbjct: 15  MATKPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRR 74

Query: 70  YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE 129
           YVYHDV+RL DLEKLIDCS++QPYTINGAKVIFLN R QSR   + SSN CFTCDRILQE
Sbjct: 75  YVYHDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSR--AKVSSNVCFTCDRILQE 134

Query: 130 PFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDDDAAAAAAGG 189
           PFHFCSLSCKVD++ +QG DL  IL+R DESDF+   FE LRMDG     D     +   
Sbjct: 135 PFHFCSLSCKVDYLSYQGDDLSSILYRIDESDFT---FEGLRMDG----HDQLGEISTME 194

Query: 190 CGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPLS 249
            G     + +E  Q N  +S  +     K+K   +++LP  ++ SL +RRKGAP RAP S
Sbjct: 195 DGEDILVISDESEQGN--NSHKKEKKKSKKKKPESNYLPGMVLSSLGNRRKGAPHRAPFS 243

[Close]

BLAST of Cp4.1LG09g09300 vs. TAIR 10
Match: AT2G12646.1 (PLATZ transcription factor family protein )

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-50
Identity = 114/260 (43.85%), Postives = 153/260 (58.85%), Query Frame = 0


Query: 13  KPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRRYVY 72
           KPAWL AL AE FF  C  HE  +K+E+NV CL CC S+CPHC+ SHR H LLQVRRYVY
Sbjct: 5   KPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVY 64

Query: 73  HDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQEPFH 132
           HDV+RL DL+KLIDCS++Q YTIN AKV+F+  RPQ+R  K G+ N C +CDR LQEP+ 
Sbjct: 65  HDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFK-GAGNYCTSCDRSLQEPYI 124

Query: 133 FCSLSCKVDHMVFQGQDLCEIL---HRF--------------DESDFSYSQFESLRMDGL 192
            CSL CKVD ++ + +D+   L   H                D+   +Y    S  +DG 
Sbjct: 125 HCSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVVDGD 184

Query: 193 EGI-------DDDAAAAAAGGCGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLP 249
           E +       D++ A AAA     T + + ++   F     C++  + +K  ++  D + 
Sbjct: 185 ESMSWSSASSDNNNAGAAAAYAATTTHVVRKKRTGF---CLCAKSANSYKEVSEDPDDIS 244

[Close]

BLAST of Cp4.1LG09g09300 vs. TAIR 10
Match: AT3G60670.1 (PLATZ transcription factor family protein )

HSP 1 Score: 189.1 bits (479), Expect = 4.2e-48
Identity = 100/246 (40.65%), Postives = 141/246 (57.32%), Query Frame = 0


Query: 14  PAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRRYVYH 73
           PAWL+ L+ + FF  CL HE+ +K+EKN+ C+ CCL+ICPHCLSSH +H LLQ+RRYVY 
Sbjct: 7   PAWLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYR 66

Query: 74  DVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQEPFHF 133
           DV+R+ D  KL+DCS IQPYT N +KV+F+N RPQSR  + GS N C TCDR LQ P+ F
Sbjct: 67  DVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFR-GSGNICITCDRSLQSPYLF 126

Query: 134 CSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDDDAAAAAAGGCGGT 193
           C LSCK+  ++ + + L   L   +  D +     +     LE    +  ++ + G  G 
Sbjct: 127 CCLSCKISDVIMRQRGLSGFLRVCNVLDLTDEVTTTTPSSTLEPTGSNRTSSESSGNEG- 186

Query: 194 PNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIV-----------LSLSSRRKGA 249
                 E   + +A +C+  T I ++K          +            ++  +RRK  
Sbjct: 187 ------EDMFWCQALACTATTEIVRKKRSSLSTTCRRVTEVVSTTNTEAPVNFLNRRKNP 244

[Close]

BLAST of Cp4.1LG09g09300 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-31
Identity = 69/153 (45.10%), Postives = 93/153 (60.78%), Query Frame = 0


Query: 14  PAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLS-ICPHCLSSHRAHPLLQVRRYVY 73
           P WL+ L+ E FF  C LH +  KSE N++CL C    +C  CLS H+ H  +Q+RR  Y
Sbjct: 12  PHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSY 71

Query: 74  HDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQEPFH 133
           HDVIR+ +++K +D + +Q Y IN AKV+FLN RPQ RP K G  N C  C R L + F 
Sbjct: 72  HDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGK-GVINTCEVCYRSLVDSFR 131

Query: 134 FCSLSCKVDHMVFQGQDLCEILHRFDESDFSYS 166
           FCSL CK+  +  + +   E  +   +SD SYS
Sbjct: 132 FCSLGCKISGISKKKRK--EWTNNLSDSDDSYS 161

[Close]

BLAST of Cp4.1LG09g09300 vs. TAIR 10
Match: AT2G01818.1 (PLATZ transcription factor family protein )

HSP 1 Score: 129.0 bits (323), Expect = 5.2e-30
Identity = 64/138 (46.38%), Postives = 87/138 (63.04%), Query Frame = 0


Query: 12  AKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLS----SHRAHPLLQV 71
           ++  W++ L+   FFG C+ H+  RK+EKNVFC+ C + IC HC +    SH  H  LQ+
Sbjct: 9   SEEVWIETLLNSEFFGICMNHKYLRKNEKNVFCIDCNVEICRHCCNTVTDSHFLHRRLQI 68

Query: 72  RRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQ---SRPCKQGSSNA-CFTC 131
            +YVY DVIRL +++   DCS IQ Y ING K I LN RPQ   +RP  +  + A C TC
Sbjct: 69  CKYVYQDVIRLLEIQNYFDCSEIQTYKINGEKAIHLNSRPQAKDARPSTKAKNGASCVTC 128

Query: 132 DRILQE-PFHFCSLSCKV 141
            R +Q+ P  FCS+SCK+
Sbjct: 129 KRYIQDHPNLFCSISCKI 146

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g09300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	1.7e-49	43.85	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cp4.1LG09g09300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542746.1	1.82e-187	100.00	uncharacterized protein LOC111802565 [Cucurbita pepo subsp. pepo]	[more]
KAG6573162.1	1.28e-185	99.60	hypothetical protein SDJN03_27049, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022954838.1	1.01e-184	98.80	uncharacterized protein LOC111456982 [Cucurbita moschata]	[more]
KAG7012346.1	2.72e-178	99.59	hypothetical protein SDJN02_25098, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022994454.1	1.06e-176	95.98	uncharacterized protein LOC111490171 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG09g09300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GS78	4.91e-185	98.80	uncharacterized protein LOC111456982 OS=Cucurbita moschata OX=3662 GN=LOC1114569...	[more]
A0A6J1K2W5	5.11e-177	95.98	uncharacterized protein LOC111490171 OS=Cucurbita maxima OX=3661 GN=LOC111490171...	[more]
A0A6J1C6S4	1.71e-159	83.83	uncharacterized protein LOC111008916 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1KJX3	1.00e-151	80.46	uncharacterized protein LOC111495276 OS=Cucurbita maxima OX=3661 GN=LOC111495276...	[more]
A0A6J1EBG2	2.02e-151	80.46	uncharacterized protein LOC111431647 OS=Cucurbita moschata OX=3662 GN=LOC1114316...	[more]

BLAST of Cp4.1LG09g09300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31040.1	6.7e-78	62.08	PLATZ transcription factor family protein	[more]
AT2G12646.1	1.2e-50	43.85	PLATZ transcription factor family protein	[more]
AT3G60670.1	4.2e-48	40.65	PLATZ transcription factor family protein	[more]
AT1G32700.1	1.2e-31	45.10	PLATZ transcription factor family protein	[more]
AT2G01818.1	5.2e-30	46.38	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 68..140 e-value: 3.9E-28 score: 97.9
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 14..249
None	No IPR available	PANTHER	PTHR31065:SF45	SUBFAMILY NOT NAMED	coord: 14..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g09300.1	Cp4.1LG09g09300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010150	leaf senescence
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding