Cp4.1LG09g09220 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCTCTCAAAGCTATTCCTTCTCATAGTTTTGATACTCATCTCTTATTCCACAACCCATGGATCCAAAGTTGAACCAAACAACAAAGACAACGACGAGCGTTTCGATCATCTTCCTTCAACAGATAGCGACAATTCTCCGCTCCGTGGCCTTCTCTTTAACTTCCAATCTCTACAAAAGGCTCGATTGACATGCAACATGTATCCAAGAGTGTGTCGAGCCAAGGGTAGCCCAGGGCCGGATTGCTGCAAGAAGAAGTGTGTGAATGTCGAGACCGATAGGAACAACTGCGGGATGTGTGGGAATAAATGTAAGTATTCAAGGATATGTTGCAATGGAAGGTGTGTGAATCCGATGTTCAATAAGAAGCATTGTGGAGGTTGTGGCAATGAGTGCAGCAAAGGAAGCTCTTGCGCGTATGGGATGTGTGACTATGCGTAG ATGAAGCTCTCAAAGCTATTCCTTCTCATAGTTTTGATACTCATCTCTTATTCCACAACCCATGGATCCAAAGTTGAACCAAACAACAAAGACAACGACGAGCGTTTCGATCATCTTCCTTCAACAGATAGCGACAATTCTCCGCTCCGTGGCCTTCTCTTTAACTTCCAATCTCTACAAAAGGCTCGATTGACATGCAACATGTATCCAAGAGTGTGTCGAGCCAAGGGTAGCCCAGGGCCGGATTGCTGCAAGAAGAAGTGTGTGAATGTCGAGACCGATAGGAACAACTGCGGGATGTGTGGGAATAAATGTAAGTATTCAAGGATATGTTGCAATGGAAGGTGTGTGAATCCGATGTTCAATAAGAAGCATTGTGGAGGTTGTGGCAATGAGTGCAGCAAAGGAAGCTCTTGCGCGTATGGGATGTGTGACTATGCGTAG ATGAAGCTCTCAAAGCTATTCCTTCTCATAGTTTTGATACTCATCTCTTATTCCACAACCCATGGATCCAAAGTTGAACCAAACAACAAAGACAACGACGAGCGTTTCGATCATCTTCCTTCAACAGATAGCGACAATTCTCCGCTCCGTGGCCTTCTCTTTAACTTCCAATCTCTACAAAAGGCTCGATTGACATGCAACATGTATCCAAGAGTGTGTCGAGCCAAGGGTAGCCCAGGGCCGGATTGCTGCAAGAAGAAGTGTGTGAATGTCGAGACCGATAGGAACAACTGCGGGATGTGTGGGAATAAATGTAAGTATTCAAGGATATGTTGCAATGGAAGGTGTGTGAATCCGATGTTCAATAAGAAGCATTGTGGAGGTTGTGGCAATGAGTGCAGCAAAGGAAGCTCTTGCGCGTATGGGATGTGTGACTATGCGTAG MKLSKLFLLIVLILISYSTTHGSKVEPNNKDNDERFDHLPSTDSDNSPLRGLLFNFQSLQKARLTCNMYPRVCRAKGSPGPDCCKKKCVNVETDRNNCGMCGNKCKYSRICCNGRCVNPMFNKKHCGGCGNECSKGSSCAYGMCDYA Homology
BLAST of Cp4.1LG09g09220 vs. ExPASy Swiss-Prot
Match: Q9SZ28 (Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At4g26880 PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 4.8e-20 Identity = 40/86 (46.51%), Postives = 54/86 (62.79%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. ExPASy Swiss-Prot
Match: Q9FLQ0 (Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g55110 PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 6.5e-17 Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. ExPASy Swiss-Prot
Match: Q9C6T5 (Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g50720 PE=2 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 6.5e-17 Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. ExPASy Swiss-Prot
Match: Q9LNN7 (Protein GRIM REAPER OS=Arabidopsis thaliana OX=3702 GN=GRI PE=1 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.2e-16 Identity = 55/155 (35.48%), Postives = 81/155 (52.26%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. ExPASy Swiss-Prot
Match: Q40579 (Protein STIG1 OS=Nicotiana tabacum OX=4097 GN=STIG1 PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.1e-11 Identity = 50/150 (33.33%), Postives = 67/150 (44.67%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. NCBI nr
Match: KAG6573172.1 (Protein GRIM REAPER, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 307 bits (786), Expect = 1.85e-105 Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. NCBI nr
Match: KAG7012355.1 (Protein GRIM REAPER, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 295 bits (754), Expect = 2.20e-100 Identity = 138/144 (95.83%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. NCBI nr
Match: XP_038895517.1 (stigma-specific STIG1-like protein 1 [Benincasa hispida]) HSP 1 Score: 231 bits (590), Expect = 1.79e-75 Identity = 115/155 (74.19%), Postives = 124/155 (80.00%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. NCBI nr
Match: XP_008440707.1 (PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis melo] >TYJ99322.1 stigma-specific STIG1-like protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 226 bits (577), Expect = 1.77e-73 Identity = 111/156 (71.15%), Postives = 126/156 (80.77%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. NCBI nr
Match: KAA0055392.1 (stigma-specific STIG1-like protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 222 bits (566), Expect = 8.69e-72 Identity = 110/157 (70.06%), Postives = 128/157 (81.53%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. ExPASy TrEMBL
Match: A0A5D3BHY1 (Stigma-specific STIG1-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005360 PE=3 SV=1) HSP 1 Score: 226 bits (577), Expect = 8.59e-74 Identity = 111/156 (71.15%), Postives = 126/156 (80.77%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. ExPASy TrEMBL
Match: A0A1S3B1R3 (stigma-specific STIG1-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103485044 PE=3 SV=1) HSP 1 Score: 226 bits (577), Expect = 8.59e-74 Identity = 111/156 (71.15%), Postives = 126/156 (80.77%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. ExPASy TrEMBL
Match: A0A5A7UHT6 (Stigma-specific STIG1-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002370 PE=3 SV=1) HSP 1 Score: 222 bits (566), Expect = 4.21e-72 Identity = 110/157 (70.06%), Postives = 128/157 (81.53%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. ExPASy TrEMBL
Match: A0A0A0LWX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058155 PE=3 SV=1) HSP 1 Score: 206 bits (523), Expect = 1.54e-65 Identity = 102/157 (64.97%), Postives = 119/157 (75.80%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. ExPASy TrEMBL
Match: A0A0A0LRD7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058150 PE=3 SV=1) HSP 1 Score: 203 bits (516), Expect = 7.16e-65 Identity = 95/119 (79.83%), Postives = 103/119 (86.55%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. TAIR 10
Match: AT1G11925.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 134.4 bits (337), Expect = 7.3e-32 Identity = 54/86 (62.79%), Postives = 68/86 (79.07%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. TAIR 10
Match: AT4G26880.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 99.0 bits (245), Expect = 3.4e-21 Identity = 40/86 (46.51%), Postives = 54/86 (62.79%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. TAIR 10
Match: AT1G50720.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 88.6 bits (218), Expect = 4.6e-18 Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. TAIR 10
Match: AT5G55110.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 88.6 bits (218), Expect = 4.6e-18 Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 0
BLAST of Cp4.1LG09g09220 vs. TAIR 10
Match: AT1G53130.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 86.3 bits (212), Expect = 2.3e-17 Identity = 55/155 (35.48%), Postives = 81/155 (52.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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