Cp4.1LG09g08610 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG09g08610
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionNAC transcription factor 25-like
LocationCp4.1LG09: 7878720 .. 7879091 (+)
RNA-Seq ExpressionCp4.1LG09g08610
SyntenyCp4.1LG09g08610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGCTTTCTATGGCGGCGGCGGGGAGGCAGCTGAATCCAGTAGTTGGCGGAGGACACAAAGGCAGCGGGAATTGTTACTTAGACATTGTCGCCTTATCAGGCGGAGGTGACGAGATAATTAATCATCAAAACAGTTCGAATATCTCGAAGTTACCTTTGTCGAGATGTAGCTCAAAAGTCGCCAAACGTGGCCACCTTTGGGGCGGCAGAAAGCCACACCGGCTCGATCTTATCAATAGCTACAATGGCGGCGTGACTACCAGAACTGAAGAAAATACAATCTCGTACGTGTCACTTCTCAACCATCTTCTGGTGCAAAATGCAGCGTTTCAATTGGTTGCGCCGCTTATTAGGTGTAGGTTGTAA

mRNA sequence

ATGGAGGAGCTTTCTATGGCGGCGGCGGGGAGGCAGCTGAATCCAGTAGTTGGCGGAGGACACAAAGGCAGCGGGAATTGTTACTTAGACATTGTCGCCTTATCAGGCGGAGGTGACGAGATAATTAATCATCAAAACAGTTCGAATATCTCGAAGTTACCTTTGTCGAGATGTAGCTCAAAAGTCGCCAAACGTGGCCACCTTTGGGGCGGCAGAAAGCCACACCGGCTCGATCTTATCAATAGCTACAATGGCGGCGTGACTACCAGAACTGAAGAAAATACAATCTCGTACGTGTCACTTCTCAACCATCTTCTGGTGCAAAATGCAGCGTTTCAATTGGTTGCGCCGCTTATTAGGTGTAGGTTGTAA

Coding sequence (CDS)

ATGGAGGAGCTTTCTATGGCGGCGGCGGGGAGGCAGCTGAATCCAGTAGTTGGCGGAGGACACAAAGGCAGCGGGAATTGTTACTTAGACATTGTCGCCTTATCAGGCGGAGGTGACGAGATAATTAATCATCAAAACAGTTCGAATATCTCGAAGTTACCTTTGTCGAGATGTAGCTCAAAAGTCGCCAAACGTGGCCACCTTTGGGGCGGCAGAAAGCCACACCGGCTCGATCTTATCAATAGCTACAATGGCGGCGTGACTACCAGAACTGAAGAAAATACAATCTCGTACGTGTCACTTCTCAACCATCTTCTGGTGCAAAATGCAGCGTTTCAATTGGTTGCGCCGCTTATTAGGTGTAGGTTGTAA

Protein sequence

MEELSMAAAGRQLNPVVGGGHKGSGNCYLDIVALSGGGDEIINHQNSSNISKLPLSRCSSKVAKRGHLWGGRKPHRLDLINSYNGGVTTRTEENTISYVSLLNHLLVQNAAFQLVAPLIRCRL
Homology
BLAST of Cp4.1LG09g08610 vs. NCBI nr
Match: XP_038895342.1 (NAC transcription factor 25-like [Benincasa hispida])

HSP 1 Score: 152 bits (384), Expect = 3.22e-42
Identity = 88/130 (67.69%), Postives = 95/130 (73.08%), Query Frame = 0

Query: 1   MEELSM--AAAGRQLNPVVGGGHKGSGNCYLDIVALSGGGDEIINHQNSSNISKLPLSRC 60
           MEELS   AAA R L  VVGGGHKGSGNCYLD+VALS  GD+IINHQN+SNIS+LP S C
Sbjct: 200 MEELSRVAAAAARPLKTVVGGGHKGSGNCYLDVVALSSEGDDIINHQNNSNISELPSSSC 259

Query: 61  SSKVAKRGHLWGGR--------KPHRLDLINSYNGGVTTR-TEENTISYVSLLNHLLVQN 119
           SSK      LW G         KP RLDL+NSY+GG TT  TEENTISY+SLLN L VQN
Sbjct: 260 SSKRGLTCQLWSGGATASNDGGKPLRLDLMNSYSGGATTAGTEENTISYMSLLNQLPVQN 319

BLAST of Cp4.1LG09g08610 vs. NCBI nr
Match: KAG6584010.1 (NAC transcription factor 25, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141 bits (356), Expect = 4.42e-38
Identity = 82/130 (63.08%), Postives = 88/130 (67.69%), Query Frame = 0

Query: 1   MEELSMAAAG---RQLNPVVGGGHKGSGNCYLDIVALSGGGDEIINHQNSSNISKLPLSR 60
           MEELS AAA    R    VVGGG KG  NCYLD+VALS  GDEIINHQ +SNIS+LP S 
Sbjct: 197 MEELSRAAAAAAARLPKLVVGGGQKGGRNCYLDVVALSSQGDEIINHQTNSNISELPSSS 256

Query: 61  CSSKVAKRGHLWGGR--------KPHRLDLINSYNGGVTTRTEENTISYVSLLNHLLVQN 119
           CSSK      LW G         KP RLDL+NSY+GGVT  TEENT+SYVSLLN L VQN
Sbjct: 257 CSSKRGHTCQLWSGGATASNDGGKPLRLDLMNSYSGGVTPGTEENTVSYVSLLNQLSVQN 316

BLAST of Cp4.1LG09g08610 vs. NCBI nr
Match: XP_022927343.1 (NAC transcription factor 25-like [Cucurbita moschata])

HSP 1 Score: 141 bits (355), Expect = 6.22e-38
Identity = 82/130 (63.08%), Postives = 88/130 (67.69%), Query Frame = 0

Query: 1   MEELSMAAAG---RQLNPVVGGGHKGSGNCYLDIVALSGGGDEIINHQNSSNISKLPLSR 60
           MEELS AAA    R    VVGGG KG  NCYLD+VALS  GDEIINHQ +SNIS+LP S 
Sbjct: 197 MEELSRAAAAAAARLPKLVVGGGQKGGRNCYLDVVALSNEGDEIINHQTNSNISELPSSS 256

Query: 61  CSSKVAKRGHLWGGR--------KPHRLDLINSYNGGVTTRTEENTISYVSLLNHLLVQN 119
           CSSK      LW G         KP RLDL+NSY+GGVT  TEENT+SYVSLLN L VQN
Sbjct: 257 CSSKRGLTCQLWSGGATASNDGGKPLRLDLMNSYSGGVTPGTEENTVSYVSLLNQLSVQN 316

BLAST of Cp4.1LG09g08610 vs. NCBI nr
Match: XP_023520007.1 (NAC transcription factor 25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 140 bits (353), Expect = 1.23e-37
Identity = 81/130 (62.31%), Postives = 88/130 (67.69%), Query Frame = 0

Query: 1   MEELSMAAAG---RQLNPVVGGGHKGSGNCYLDIVALSGGGDEIINHQNSSNISKLPLSR 60
           MEELS AAA    R    VVGGG KG  NCYLD+VALS  GDEIINHQ +SNIS+LP S 
Sbjct: 197 MEELSRAAAAAAARLPKLVVGGGQKGGRNCYLDVVALSSEGDEIINHQTNSNISELPSSS 256

Query: 61  CSSKVAKRGHLWGGR--------KPHRLDLINSYNGGVTTRTEENTISYVSLLNHLLVQN 119
           CSSK      +W G         KP RLDL+NSY+GGVT  TEENT+SYVSLLN L VQN
Sbjct: 257 CSSKRGLTCQIWSGGATASNDGGKPLRLDLMNSYSGGVTPGTEENTVSYVSLLNQLSVQN 316

BLAST of Cp4.1LG09g08610 vs. NCBI nr
Match: XP_023001729.1 (NAC transcription factor 25-like [Cucurbita maxima])

HSP 1 Score: 140 bits (353), Expect = 1.23e-37
Identity = 82/130 (63.08%), Postives = 88/130 (67.69%), Query Frame = 0

Query: 1   MEELSMAAAG---RQLNPVVGGGHKGSGNCYLDIVALSGGGDEIINHQNSSNISKLPLSR 60
           MEELS AAA    R    VVGGG KG  NCYLD+VALS  GDEIINHQ +SNIS+LP S 
Sbjct: 197 MEELSRAAAAAAARLPKLVVGGGQKGGRNCYLDVVALSSEGDEIINHQTNSNISELPSSS 256

Query: 61  CSSKVAKRGHLWGGR--------KPHRLDLINSYNGGVTTRTEENTISYVSLLNHLLVQN 119
           CSSK      LW G         KP RLDL+NSY+GGVT  TEENT+SYVSLLN L VQN
Sbjct: 257 CSSKRGLTCQLWSGGATASNDGGKPLRLDLMNSYSGGVTPVTEENTVSYVSLLNQLSVQN 316

BLAST of Cp4.1LG09g08610 vs. ExPASy TrEMBL
Match: A0A6J1EKR1 (NAC transcription factor 25-like OS=Cucurbita moschata OX=3662 GN=LOC111434199 PE=4 SV=1)

HSP 1 Score: 141 bits (355), Expect = 3.01e-38
Identity = 82/130 (63.08%), Postives = 88/130 (67.69%), Query Frame = 0

Query: 1   MEELSMAAAG---RQLNPVVGGGHKGSGNCYLDIVALSGGGDEIINHQNSSNISKLPLSR 60
           MEELS AAA    R    VVGGG KG  NCYLD+VALS  GDEIINHQ +SNIS+LP S 
Sbjct: 197 MEELSRAAAAAAARLPKLVVGGGQKGGRNCYLDVVALSNEGDEIINHQTNSNISELPSSS 256

Query: 61  CSSKVAKRGHLWGGR--------KPHRLDLINSYNGGVTTRTEENTISYVSLLNHLLVQN 119
           CSSK      LW G         KP RLDL+NSY+GGVT  TEENT+SYVSLLN L VQN
Sbjct: 257 CSSKRGLTCQLWSGGATASNDGGKPLRLDLMNSYSGGVTPGTEENTVSYVSLLNQLSVQN 316

BLAST of Cp4.1LG09g08610 vs. ExPASy TrEMBL
Match: A0A6J1KNH8 (NAC transcription factor 25-like OS=Cucurbita maxima OX=3661 GN=LOC111495779 PE=4 SV=1)

HSP 1 Score: 140 bits (353), Expect = 5.97e-38
Identity = 82/130 (63.08%), Postives = 88/130 (67.69%), Query Frame = 0

Query: 1   MEELSMAAAG---RQLNPVVGGGHKGSGNCYLDIVALSGGGDEIINHQNSSNISKLPLSR 60
           MEELS AAA    R    VVGGG KG  NCYLD+VALS  GDEIINHQ +SNIS+LP S 
Sbjct: 197 MEELSRAAAAAAARLPKLVVGGGQKGGRNCYLDVVALSSEGDEIINHQTNSNISELPSSS 256

Query: 61  CSSKVAKRGHLWGGR--------KPHRLDLINSYNGGVTTRTEENTISYVSLLNHLLVQN 119
           CSSK      LW G         KP RLDL+NSY+GGVT  TEENT+SYVSLLN L VQN
Sbjct: 257 CSSKRGLTCQLWSGGATASNDGGKPLRLDLMNSYSGGVTPVTEENTVSYVSLLNQLSVQN 316

BLAST of Cp4.1LG09g08610 vs. ExPASy TrEMBL
Match: A0A0A0LXC3 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G073060 PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 1.61e-36
Identity = 83/130 (63.85%), Postives = 92/130 (70.77%), Query Frame = 0

Query: 1   MEELSMAAAGRQLNPVVGGGHKGSGNCYLDIVALSGGGDEIIN-HQNSSN-ISKLPLSRC 60
           MEELS  AA R    VVGGGHKG+GNCYLD+V LS  GD+IIN HQN+SN IS+LP S C
Sbjct: 209 MEELSRVAA-RPPKTVVGGGHKGTGNCYLDVVTLSTEGDDIINNHQNNSNNISELPSSSC 268

Query: 61  SSKVAKRGHLWGGR--------KPHRLDLINSYNGGVTTR-TEENTISYVSLLNHLLVQN 119
           SSK      LW G         KP RLDL+NSY+GG TT  TEENT+SY+SLLN L VQN
Sbjct: 269 SSKRGLTSQLWSGGATASNDGGKPLRLDLMNSYSGGATTAGTEENTVSYMSLLNQLPVQN 328

BLAST of Cp4.1LG09g08610 vs. ExPASy TrEMBL
Match: A0A6J1CE86 (NAC transcription factor 25-like OS=Momordica charantia OX=3673 GN=LOC111010697 PE=4 SV=1)

HSP 1 Score: 136 bits (342), Expect = 1.76e-36
Identity = 77/118 (65.25%), Postives = 84/118 (71.19%), Query Frame = 0

Query: 1   MEELSMAAAGRQLNPVVGGGHKGSGNCYLDIVALSGGGDEIINHQNSSNISKLPLSRCSS 60
           MEELS       L PV  GGHKG GNCYLD+  LS  GD+II HQN+SNIS+LP S CSS
Sbjct: 188 MEELSRVP----LKPVASGGHKGGGNCYLDVGVLSSDGDDII-HQNASNISELPSSSCSS 247

Query: 61  KVAKRG---HLW--GGRKPHRLDLINSYNGGVTTRTEENTISYVSLLNHLLVQNAAFQ 113
           K  KRG    LW  GG K  RLDLINSY+ GVT+  EENT+SYVSLLN L VQNAAFQ
Sbjct: 248 KATKRGLPCQLWNGGGAKQLRLDLINSYSSGVTSGAEENTVSYVSLLNQLPVQNAAFQ 300

BLAST of Cp4.1LG09g08610 vs. ExPASy TrEMBL
Match: A0A5D3DRW7 (NAC transcription factor 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00480 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 2.89e-35
Identity = 82/132 (62.12%), Postives = 91/132 (68.94%), Query Frame = 0

Query: 1   MEELSMAAAGRQLNPVVGGGHKGSGNCYLDIVALSGGGDEII--NHQNSSN-ISKLPLSR 60
           MEELS  AA R    VVGGGHKG+GNCY+D+VALS  GD  I  NHQN+SN IS+LP S 
Sbjct: 165 MEELSRVAA-RPPKTVVGGGHKGTGNCYMDVVALSTEGDHDIINNHQNNSNNISELPSSN 224

Query: 61  CSSKVAKRGHLWG---------GRKPHRLDLINSYNGGVTTR-TEENTISYVSLLNHLLV 119
           CSSK      LW          G KP RLDL+NSY+GG TT  TEENT+SY+SLLN L V
Sbjct: 225 CSSKRGLTCQLWSSGGATASNEGGKPLRLDLMNSYSGGATTAGTEENTVSYMSLLNQLPV 284

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038895342.13.22e-4267.69NAC transcription factor 25-like [Benincasa hispida][more]
KAG6584010.14.42e-3863.08NAC transcription factor 25, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022927343.16.22e-3863.08NAC transcription factor 25-like [Cucurbita moschata][more]
XP_023520007.11.23e-3762.31NAC transcription factor 25-like [Cucurbita pepo subsp. pepo][more]
XP_023001729.11.23e-3763.08NAC transcription factor 25-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1EKR13.01e-3863.08NAC transcription factor 25-like OS=Cucurbita moschata OX=3662 GN=LOC111434199 P... [more]
A0A6J1KNH85.97e-3863.08NAC transcription factor 25-like OS=Cucurbita maxima OX=3661 GN=LOC111495779 PE=... [more]
A0A0A0LXC31.61e-3663.85NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G073060 PE=4 SV... [more]
A0A6J1CE861.76e-3665.25NAC transcription factor 25-like OS=Momordica charantia OX=3673 GN=LOC111010697 ... [more]
A0A5D3DRW72.89e-3562.12NAC transcription factor 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g08610.1Cp4.1LG09g08610.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048731 system development