Cp4.1LG09g08060 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g08060
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Dof zinc finger protein
Location	Cp4.1LG09: 7508869 .. 7509195 (+)
RNA-Seq Expression	Cp4.1LG09g08060
Synteny	Cp4.1LG09g08060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCCTTGCCCAAGATGCAAAAGCCCCGACACCAAATTTTGTTATTTCAATAACTACAACGTTAATCAGCCAAGACATTTCTGTAAGGGCTGCCAGAGATACTGGACGGCCGGTGGCGCCCTCCGCAACGTCCCCGTCGGAGCCGGCCGCCGGAAAACCAAACCTCCTTGTCGGACCTTTGATGGGTTGCCGGAGAATTGTGTCTTTGATTCTTCAGGGATGGTGGCGGTGCAGCCGTTTGAGTTGGAGGAGTGGCACGGTGGTTTCAACCAAATTTCACCGGTGAAGCGGCGGAGAGATTGCCAAGATGGTCAAACTTGTTGA

mRNA sequence

ATGATTCCTTGCCCAAGATGCAAAAGCCCCGACACCAAATTTTGTTATTTCAATAACTACAACGTTAATCAGCCAAGACATTTCTGTAAGGGCTGCCAGAGATACTGGACGGCCGGTGGCGCCCTCCGCAACGTCCCCGTCGGAGCCGGCCGCCGGAAAACCAAACCTCCTTGTCGGACCTTTGATGGGTTGCCGGAGAATTGTGTCTTTGATTCTTCAGGGATGGTGGCGGTGCAGCCGTTTGAGTTGGAGGAGTGGCACGGTGGTTTCAACCAAATTTCACCGGTGAAGCGGCGGAGAGATTGCCAAGATGGTCAAACTTGTTGA

Coding sequence (CDS)

ATGATTCCTTGCCCAAGATGCAAAAGCCCCGACACCAAATTTTGTTATTTCAATAACTACAACGTTAATCAGCCAAGACATTTCTGTAAGGGCTGCCAGAGATACTGGACGGCCGGTGGCGCCCTCCGCAACGTCCCCGTCGGAGCCGGCCGCCGGAAAACCAAACCTCCTTGTCGGACCTTTGATGGGTTGCCGGAGAATTGTGTCTTTGATTCTTCAGGGATGGTGGCGGTGCAGCCGTTTGAGTTGGAGGAGTGGCACGGTGGTTTCAACCAAATTTCACCGGTGAAGCGGCGGAGAGATTGCCAAGATGGTCAAACTTGTTGA

Protein sequence

MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFDSSGMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC

Homology

[Close]

BLAST of Cp4.1LG09g08060 vs. ExPASy Swiss-Prot
Match: P68350 (Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.0e-35
Identity = 73/116 (62.93%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           +IPCPRCKS +TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK+KPP R 
Sbjct: 61  IIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV 120

Query: 61  FDGLPE--NCVFDSSGMVAVQPFELEEW------HGGFNQISPVKRRRDCQDGQTC 109
             G  E       +   V +    +EEW      HGGF    PVKR R   DGQ+C
Sbjct: 121 -GGFAELLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKRLRCYTDGQSC 175

[Close]

BLAST of Cp4.1LG09g08060 vs. ExPASy Swiss-Prot
Match: O22967 (Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 5.6e-34
Identity = 70/118 (59.32%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           +I CPRCKS +TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVPVGAGRRK+KPP R 
Sbjct: 57  IIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRV 116

Query: 61  FDGLPENCVFDSSGMVAVQPFE---LEEW-------HGGFNQISPVKRRRDCQDGQTC 109
             G+    + D +G+  V+      +EEW       HG F    P+KR R   DGQ+C
Sbjct: 117 VVGM----LGDGNGVRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKRLRCYSDGQSC 170

[Close]

BLAST of Cp4.1LG09g08060 vs. ExPASy Swiss-Prot
Match: Q5JLR7 (Dof zinc finger protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF5 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.3e-26
Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 2   IPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKP 57
           +PCPRC+S DTKFCYFNNYNVNQPRHFCK C RYWTAGGALRNVPVGAGRRK +P
Sbjct: 109 LPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNRP 163

[Close]

BLAST of Cp4.1LG09g08060 vs. ExPASy Swiss-Prot
Match: Q93ZL5 (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 2.8e-25
Identity = 46/62 (74.19%), Postives = 53/62 (85.48%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           ++PCPRC S +TKFCY+NNYNVNQPRHFCK CQRYWTAGG +RNVPVGAGRRK K P   
Sbjct: 137 ILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSPASH 196

Query: 61  FD 63
           ++
Sbjct: 197 YN 198

[Close]

BLAST of Cp4.1LG09g08060 vs. ExPASy Swiss-Prot
Match: Q8LFV3 (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 3.6e-25
Identity = 45/55 (81.82%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTK 56
           ++PCPRCKS +TKFCY+NNYN+NQPRHFCK CQRYWTAGG +RNVPVGAGRRK K
Sbjct: 109 ILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 163

[Close]

BLAST of Cp4.1LG09g08060 vs. NCBI nr
Match: XP_022955029.1 (dof zinc finger protein DOF1.5-like [Cucurbita moschata] >XP_023542296.1 dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo] >KAG6573305.1 Cyclic dof factor 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012474.1 Cyclic dof factor 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251 bits (640), Expect = 8.93e-84
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT
Sbjct: 48  MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 107

Query: 61  FDGLPENCVFDSSGMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 108
           FDGLPENCVFDSSGMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC
Sbjct: 108 FDGLPENCVFDSSGMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 155

[Close]

BLAST of Cp4.1LG09g08060 vs. NCBI nr
Match: XP_022994968.1 (cyclic dof factor 4-like [Cucurbita maxima])

HSP 1 Score: 249 bits (636), Expect = 3.64e-83
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           MIPCPRC+SPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT
Sbjct: 48  MIPCPRCQSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 107

Query: 61  FDGLPENCVFDSSGMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 108
           FDGLPENCVFDSSGMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC
Sbjct: 108 FDGLPENCVFDSSGMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 155

[Close]

BLAST of Cp4.1LG09g08060 vs. NCBI nr
Match: XP_038895022.1 (dof zinc finger protein DOF1.5-like [Benincasa hispida])

HSP 1 Score: 224 bits (570), Expect = 8.18e-73
Identity = 102/120 (85.00%), Postives = 104/120 (86.67%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           +IPCPRCKS DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT
Sbjct: 56  IIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 115

Query: 61  FDGLPENCVFDSSGMVAVQPFELE----EWH--------GGFNQISPVKRRRDCQDGQTC 108
           F GLPENCVFDSSGMVAVQPFELE    EWH        GGF Q+ PVKRRRDCQDGQTC
Sbjct: 116 FAGLPENCVFDSSGMVAVQPFELEGMVEEWHVVAAAATQGGFRQMLPVKRRRDCQDGQTC 175

[Close]

BLAST of Cp4.1LG09g08060 vs. NCBI nr
Match: XP_008443229.1 (PREDICTED: dof zinc finger protein DOF1.5 [Cucumis melo] >KAA0057037.1 dof zinc finger protein DOF1.5 [Cucumis melo var. makuwa])

HSP 1 Score: 220 bits (561), Expect = 2.12e-71
Identity = 99/120 (82.50%), Postives = 103/120 (85.83%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           +IPCPRCKS DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPCRT
Sbjct: 59  IIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRT 118

Query: 61  FDGLPENCVFDSSGMVAVQPFELE----EWH--------GGFNQISPVKRRRDCQDGQTC 108
           F GLPENCVFDSSG+V VQPFELE    +WH        GGF QI PVKRRRDCQDGQTC
Sbjct: 119 FGGLPENCVFDSSGIVTVQPFELEGMVEKWHAVAAAATQGGFRQILPVKRRRDCQDGQTC 178

[Close]

BLAST of Cp4.1LG09g08060 vs. NCBI nr
Match: KAE8653218.1 (hypothetical protein Csa_019835 [Cucumis sativus])

HSP 1 Score: 213 bits (543), Expect = 4.37e-69
Identity = 98/121 (80.99%), Postives = 102/121 (84.30%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           +IPCPRCKS DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPCRT
Sbjct: 28  IIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRT 87

Query: 61  FDGLPENCVFDSSGM-VAVQPFELE----EWH--------GGFNQISPVKRRRDCQDGQT 108
           F GLPENCVFDSSG+ V VQPFELE    +WH        GGF QI PVKRRRDC DGQT
Sbjct: 88  FGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQT 147

[Close]

BLAST of Cp4.1LG09g08060 vs. ExPASy TrEMBL
Match: A0A6J1GUR3 (dof zinc finger protein DOF1.5-like OS=Cucurbita moschata OX=3662 GN=LOC111457108 PE=4 SV=1)

HSP 1 Score: 251 bits (640), Expect = 4.33e-84
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT
Sbjct: 48  MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 107

Query: 61  FDGLPENCVFDSSGMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 108
           FDGLPENCVFDSSGMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC
Sbjct: 108 FDGLPENCVFDSSGMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 155

[Close]

BLAST of Cp4.1LG09g08060 vs. ExPASy TrEMBL
Match: A0A6J1K6K0 (cyclic dof factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111490555 PE=4 SV=1)

HSP 1 Score: 249 bits (636), Expect = 1.76e-83
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           MIPCPRC+SPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT
Sbjct: 48  MIPCPRCQSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 107

Query: 61  FDGLPENCVFDSSGMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 108
           FDGLPENCVFDSSGMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC
Sbjct: 108 FDGLPENCVFDSSGMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 155

[Close]

BLAST of Cp4.1LG09g08060 vs. ExPASy TrEMBL
Match: A0A5A7UQX1 (Dof zinc finger protein DOF1.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002240 PE=4 SV=1)

HSP 1 Score: 220 bits (561), Expect = 1.03e-71
Identity = 99/120 (82.50%), Postives = 103/120 (85.83%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           +IPCPRCKS DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPCRT
Sbjct: 59  IIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRT 118

Query: 61  FDGLPENCVFDSSGMVAVQPFELE----EWH--------GGFNQISPVKRRRDCQDGQTC 108
           F GLPENCVFDSSG+V VQPFELE    +WH        GGF QI PVKRRRDCQDGQTC
Sbjct: 119 FGGLPENCVFDSSGIVTVQPFELEGMVEKWHAVAAAATQGGFRQILPVKRRRDCQDGQTC 178

[Close]

BLAST of Cp4.1LG09g08060 vs. ExPASy TrEMBL
Match: A0A1S3B895 (dof zinc finger protein DOF1.5 OS=Cucumis melo OX=3656 GN=LOC103486868 PE=4 SV=1)

HSP 1 Score: 220 bits (561), Expect = 1.03e-71
Identity = 99/120 (82.50%), Postives = 103/120 (85.83%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           +IPCPRCKS DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPCRT
Sbjct: 59  IIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRT 118

Query: 61  FDGLPENCVFDSSGMVAVQPFELE----EWH--------GGFNQISPVKRRRDCQDGQTC 108
           F GLPENCVFDSSG+V VQPFELE    +WH        GGF QI PVKRRRDCQDGQTC
Sbjct: 119 FGGLPENCVFDSSGIVTVQPFELEGMVEKWHAVAAAATQGGFRQILPVKRRRDCQDGQTC 178

[Close]

BLAST of Cp4.1LG09g08060 vs. ExPASy TrEMBL
Match: A0A0A0LV52 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G475990 PE=4 SV=1)

HSP 1 Score: 213 bits (543), Expect = 6.05e-69
Identity = 98/121 (80.99%), Postives = 102/121 (84.30%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           +IPCPRCKS DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPCRT
Sbjct: 60  IIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRT 119

Query: 61  FDGLPENCVFDSSGM-VAVQPFELE----EWH--------GGFNQISPVKRRRDCQDGQT 108
           F GLPENCVFDSSG+ V VQPFELE    +WH        GGF QI PVKRRRDC DGQT
Sbjct: 120 FGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQT 179

[Close]

BLAST of Cp4.1LG09g08060 vs. TAIR 10
Match: AT1G29160.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 150.6 bits (379), Expect = 7.2e-37
Identity = 73/116 (62.93%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           +IPCPRCKS +TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK+KPP R 
Sbjct: 61  IIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV 120

Query: 61  FDGLPE--NCVFDSSGMVAVQPFELEEW------HGGFNQISPVKRRRDCQDGQTC 109
             G  E       +   V +    +EEW      HGGF    PVKR R   DGQ+C
Sbjct: 121 -GGFAELLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKRLRCYTDGQSC 175

[Close]

BLAST of Cp4.1LG09g08060 vs. TAIR 10
Match: AT2G34140.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 144.8 bits (364), Expect = 4.0e-35
Identity = 70/118 (59.32%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           +I CPRCKS +TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVPVGAGRRK+KPP R 
Sbjct: 57  IIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRV 116

Query: 61  FDGLPENCVFDSSGMVAVQPFE---LEEW-------HGGFNQISPVKRRRDCQDGQTC 109
             G+    + D +G+  V+      +EEW       HG F    P+KR R   DGQ+C
Sbjct: 117 VVGM----LGDGNGVRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKRLRCYSDGQSC 170

[Close]

BLAST of Cp4.1LG09g08060 vs. TAIR 10
Match: AT5G39660.1 (cycling DOF factor 2 )

HSP 1 Score: 115.9 bits (289), Expect = 2.0e-26
Identity = 46/62 (74.19%), Postives = 53/62 (85.48%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           ++PCPRC S +TKFCY+NNYNVNQPRHFCK CQRYWTAGG +RNVPVGAGRRK K P   
Sbjct: 137 ILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSPASH 196

Query: 61  FD 63
           ++
Sbjct: 197 YN 198

[Close]

BLAST of Cp4.1LG09g08060 vs. TAIR 10
Match: AT5G39660.2 (cycling DOF factor 2 )

HSP 1 Score: 115.9 bits (289), Expect = 2.0e-26
Identity = 46/62 (74.19%), Postives = 53/62 (85.48%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 60
           ++PCPRC S +TKFCY+NNYNVNQPRHFCK CQRYWTAGG +RNVPVGAGRRK K P   
Sbjct: 137 ILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSPASH 196

Query: 61  FD 63
           ++
Sbjct: 197 YN 198

[Close]

BLAST of Cp4.1LG09g08060 vs. TAIR 10
Match: AT3G47500.1 (cycling DOF factor 3 )

HSP 1 Score: 115.5 bits (288), Expect = 2.6e-26
Identity = 45/55 (81.82%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 1   MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTK 56
           ++PCPRCKS +TKFCY+NNYN+NQPRHFCK CQRYWTAGG +RNVPVGAGRRK K
Sbjct: 109 ILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 163

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g08060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P68350	1.0e-35	62.93	Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV...	[more]
O22967	5.6e-34	59.32	Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1	[more]
Q5JLR7	4.3e-26	87.27	Dof zinc finger protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF5 PE=2 ...	[more]
Q93ZL5	2.8e-25	74.19	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
Q8LFV3	3.6e-25	81.82	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]

BLAST of Cp4.1LG09g08060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955029.1	8.93e-84	100.00	dof zinc finger protein DOF1.5-like [Cucurbita moschata] >XP_023542296.1 dof zin...	[more]
XP_022994968.1	3.64e-83	99.07	cyclic dof factor 4-like [Cucurbita maxima]	[more]
XP_038895022.1	8.18e-73	85.00	dof zinc finger protein DOF1.5-like [Benincasa hispida]	[more]
XP_008443229.1	2.12e-71	82.50	PREDICTED: dof zinc finger protein DOF1.5 [Cucumis melo] >KAA0057037.1 dof zinc ...	[more]
KAE8653218.1	4.37e-69	80.99	hypothetical protein Csa_019835 [Cucumis sativus]	[more]

BLAST of Cp4.1LG09g08060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GUR3	4.33e-84	100.00	dof zinc finger protein DOF1.5-like OS=Cucurbita moschata OX=3662 GN=LOC11145710...	[more]
A0A6J1K6K0	1.76e-83	99.07	cyclic dof factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111490555 PE=4 SV=1	[more]
A0A5A7UQX1	1.03e-71	82.50	Dof zinc finger protein DOF1.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3B895	1.03e-71	82.50	dof zinc finger protein DOF1.5 OS=Cucumis melo OX=3656 GN=LOC103486868 PE=4 SV=1	[more]
A0A0A0LV52	6.05e-69	80.99	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G475990 PE...	[more]

BLAST of Cp4.1LG09g08060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29160.1	7.2e-37	62.93	Dof-type zinc finger DNA-binding family protein	[more]
AT2G34140.1	4.0e-35	59.32	Dof-type zinc finger DNA-binding family protein	[more]
AT5G39660.1	2.0e-26	74.19	cycling DOF factor 2	[more]
AT5G39660.2	2.0e-26	74.19	cycling DOF factor 2	[more]
AT3G47500.1	2.6e-26	81.82	cycling DOF factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 2..55 e-value: 3.6E-31 score: 107.1
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 4..40
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 2..56 score: 28.37871
None	No IPR available	PANTHER	PTHR31089	CYCLIC DOF FACTOR 2	coord: 1..101
None	No IPR available	PANTHER	PTHR31089:SF49	DOF ZINC FINGER PROTEIN DOF1.5-LIKE	coord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g08060.1	Cp4.1LG09g08060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity