Cp4.1LG09g07950 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAGGAGCTTCCATCTTCACACGCCACTCTCCATTTTCCTCTTCTCCTTCCTCTTCTTTTCATTCATCTGCGTCTCAAGCAATGCCTTATCCGAGACTCGCAAATTCAACTTACCCAGCTCCGATCGGGGTTTACTGAGCTTACAGAGAAGGAGAGATCGACGGATTCCTAATTGCGGCGAAAAGGTTTCGGCTCTACAGTGCTCGGAGACCCCCAATTGCCGGTGGTGCCGGAGTGATGCCATCGATGATACCTGCTTCTCCAGAGCTGAGGCGTTGAGATTGCCGCAACAGGTCTTTTCATGTGATTGA ATGGGGAGGAGCTTCCATCTTCACACGCCACTCTCCATTTTCCTCTTCTCCTTCCTCTTCTTTTCATTCATCTGCGTCTCAAGCAATGCCTTATCCGAGACTCGCAAATTCAACTTACCCAGCTCCGATCGGGGTTTACTGAGCTTACAGAGAAGGAGAGATCGACGGATTCCTAATTGCGGCGAAAAGGTTTCGGCTCTACAGTGCTCGGAGACCCCCAATTGCCGGTGGTGCCGGAGTGATGCCATCGATGATACCTGCTTCTCCAGAGCTGAGGCGTTGAGATTGCCGCAACAGGTCTTTTCATGTGATTGA ATGGGGAGGAGCTTCCATCTTCACACGCCACTCTCCATTTTCCTCTTCTCCTTCCTCTTCTTTTCATTCATCTGCGTCTCAAGCAATGCCTTATCCGAGACTCGCAAATTCAACTTACCCAGCTCCGATCGGGGTTTACTGAGCTTACAGAGAAGGAGAGATCGACGGATTCCTAATTGCGGCGAAAAGGTTTCGGCTCTACAGTGCTCGGAGACCCCCAATTGCCGGTGGTGCCGGAGTGATGCCATCGATGATACCTGCTTCTCCAGAGCTGAGGCGTTGAGATTGCCGCAACAGGTCTTTTCATGTGATTGA MGRSFHLHTPLSIFLFSFLFFSFICVSSNALSETRKFNLPSSDRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD Homology
BLAST of Cp4.1LG09g07950 vs. NCBI nr
Match: KAG6573331.1 (hypothetical protein SDJN03_27218, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 209 bits (531), Expect = 5.96e-68 Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of Cp4.1LG09g07950 vs. NCBI nr
Match: KAA0044701.1 (hypothetical protein E6C27_scaffold46G004570 [Cucumis melo var. makuwa] >TYK16886.1 hypothetical protein E5676_scaffold130G00180 [Cucumis melo var. makuwa]) HSP 1 Score: 119 bits (299), Expect = 6.34e-33 Identity = 58/74 (78.38%), Postives = 63/74 (85.14%), Query Frame = 0
BLAST of Cp4.1LG09g07950 vs. NCBI nr
Match: XP_021669958.1 (uncharacterized protein LOC110657166 [Hevea brasiliensis]) HSP 1 Score: 96.3 bits (238), Expect = 1.36e-22 Identity = 48/87 (55.17%), Postives = 61/87 (70.11%), Query Frame = 0
BLAST of Cp4.1LG09g07950 vs. NCBI nr
Match: KDP21149.1 (hypothetical protein JCGZ_21620 [Jatropha curcas]) HSP 1 Score: 87.8 bits (216), Expect = 5.26e-20 Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0
BLAST of Cp4.1LG09g07950 vs. NCBI nr
Match: XP_038723734.1 (uncharacterized protein LOC120015395 [Tripterygium wilfordii]) HSP 1 Score: 87.8 bits (216), Expect = 6.20e-20 Identity = 47/97 (48.45%), Postives = 62/97 (63.92%), Query Frame = 0
BLAST of Cp4.1LG09g07950 vs. ExPASy TrEMBL
Match: A0A0A0LX55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G467180 PE=4 SV=1) HSP 1 Score: 154 bits (388), Expect = 1.81e-46 Identity = 81/102 (79.41%), Postives = 86/102 (84.31%), Query Frame = 0
BLAST of Cp4.1LG09g07950 vs. ExPASy TrEMBL
Match: A0A5A7TT10 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00180 PE=4 SV=1) HSP 1 Score: 119 bits (299), Expect = 3.07e-33 Identity = 58/74 (78.38%), Postives = 63/74 (85.14%), Query Frame = 0
BLAST of Cp4.1LG09g07950 vs. ExPASy TrEMBL
Match: A0A067JNS3 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21620 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.55e-20 Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0
BLAST of Cp4.1LG09g07950 vs. ExPASy TrEMBL
Match: A0A1R3H5C1 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_31211 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.42e-20 Identity = 38/61 (62.30%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of Cp4.1LG09g07950 vs. ExPASy TrEMBL
Match: A0A251IYI8 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G043700 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 5.12e-20 Identity = 47/92 (51.09%), Postives = 62/92 (67.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|