Cp4.1LG09g07720 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g07720
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	AWPM-19-like family protein
Location	Cp4.1LG09: 7221317 .. 7223790 (+)
RNA-Seq Expression	Cp4.1LG09g07720
Synteny	Cp4.1LG09g07720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAGAAGACTTACAAATGTTGGCAAAGAAAGTATTCCCATATCCTTCTTTTGCCTTGAACATGAAGCATTATCCTAACACTTTACAACTCCAAAGAACTCTTTGAACACAGCAGCCTTTGCAAGTAAAGAACCTGAACCTTCCTTTTCATCCCCATTTATAAGCCCATCTCTGCCTCCTTACTTCCACATTACATTACAAGTTTTGGGTCTTTTTGTTCTGTTCTTCCTCTTTCACTCAGCTTTTTCTTTCTGATTTCACTGCTCAAATGGCTAATTCACAGATGAAATCCATTGCCACTGTGCTTCTGTTGCTTAACTTCTGCATGTATGTTATTATTTTGGGCATTGGAGGGTGGGCCATGAACAGAGCAATTGATCATGGCTTCATCATTGGTATTATCCAAGTTCTTGATTAGTCTCCTTTGTTTGTTTCATCTAGTTCCATATTTTGAATGTCTCGAACGGATTATCGAGATGAAAACTTCGATACTACGATCATATCACGGATGGAAATTGAAAAGTGATATGAACTTCGACACTATGTGTGAGATCCTACATTGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAAACGTGTTTTAGAAACCTTGAGGGAAAGTCCGAAAGGAAAAGCCTAAAGAAGACAATATTGTTAGGAATCACAACTCTCCATAATTGTATGATATTGTCCACTTGAGCATAAGCTCGCATGGCTTTGCTTTGGGCTTCCACAAAAGGTCTCGTACCAATGGAGATGTATTCATTTACTTATAAACCCATGATCATTCTCTAAATTAGCCAATGTGGGACTCACTCCCAACAATCCTCAACAAGTATCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGTTATCAAAACCTGGTACCGAGCGATGTGCCAGCGAGAATGCTGGCTCCCAAGAGGGGTGGATTGTGAGATCCCATATCAGTTGGAGAGAGGAACGAAGCATTCCTTATAAGGGTGTGAAAACCTCTACCTAGCAGATACGTTTTAAAAACCTTGAGAGAAAGCCTAAAGAGGACAATATCTACTAGCGCTGGGCTTAGGCTGTTACACTATGTGTTACACTATGTCCATGTCATGTTGTCATTTTTTTGTTTTTGGTTCATTTTGAACATGTTTCTATGTTGCAGCTTGCTGATGGGTGAGAATTTTGCAGGTCCTGGGCTTAAACTTCCAGCACATTTTTCACCAATTTACTTCCCCATAGGGAATGCAGCCACTGGTTTCTTTGTGATATTTGCTTTGTTAGCTGCTGTGTTTGGAGCTGCCTCAGCAATCTCAGGACTTAACCATATTCGGTCATGGAGTGCTGAAAGCTTCGGTGCTGCATCCTCTGCTGCTGTTTTTGCTTGGACTCTCACTCTCCTTGCCATGGGGTATGCATTCCCATCTAATTCTTTAAGAGGTTTATCTAAAAGATCCGCAATATACCTAGGAAGACGTTTCAAATACTACACATGGATTACCGGATATGTTAGTTTAATATTAGCCCATTTGATATCTCCGTATCCAAGAATCAACAAACCCGACTCTGCATTGTTCACAAAATTTTGAATCTTCTTTTTTATCTCCGATTACCCGATAATTTCCACAAGCACAAGTCCTCCTTTTTATAGGCCCGAAAATTCTTTCACAAAATAATCCATCTTTTTCAGGTTTAAAGTTTTACTAAAAAGTTCGCATCGTTCTTGTAACGGTTCATGCATTAAAACTTATCTTTTTTAGTTCAACATCTGAGAGGATAGGATTCAAACTATTGACTTCATGTTCGAGAATGTGTCTTAGTATGTTGAGTTAAGTTAACGATGACCCATTTTAGAATCTCGACAAAGTTTTTCGTATGTGTTTTCTTTTTGTTATTACATGAAAAGGAAAATAAGAAAAGAGGAGCATAACTTGCTTTGAAAGTTTTGACTGGACTTTGAGGCTTTGTTATTTATGCAGCTTTGCTTGGAAAGAGATTCAACTGGATCTCAGAAACTCAAGACTGGTGAGGAAAATAAAGATTTCTTTTCCCAGCTGCAATTTATCATCACAAATCTAATCTAAAACAGTTCCAATTCAAACTATATTGATACGACAAGATTTTGCTTGTGTTTTCATTTGTTGCAGGTAACAATGGAAGCCTTCTTCATTATTCTCTCAGCTACACAGCTTGTTTACATTATGACCATCCATGGTGCTGTGACCAAAAGATGAGAGCTGAATGCTTTAACATTTGTTTGATTCATTGCCCATTTTCAATTGTCTTTGGTGTTGTTTTCTTTTGTTGTAATTAACCATCTCTGTAAACCTTGCAAACATGCAAGGAGCTTAGTTTAGAAGATTATTCTTTTTGTGGTTTGTTGTGGTGATTTTATTTGTATAAATGTTGACAATAAACTTGGTTTGATGTTTGATTTAAAAGCTTCAGTCTTCCTCT

mRNA sequence

AAAAGAGAAGACTTACAAATGTTGGCAAAGAAAGTATTCCCATATCCTTCTTTTGCCTTGAACATGAAGCATTATCCTAACACTTTACAACTCCAAAGAACTCTTTGAACACAGCAGCCTTTGCAAGTAAAGAACCTGAACCTTCCTTTTCATCCCCATTTATAAGCCCATCTCTGCCTCCTTACTTCCACATTACATTACAAGTTTTGGGTCTTTTTGTTCTGTTCTTCCTCTTTCACTCAGCTTTTTCTTTCTGATTTCACTGCTCAAATGGCTAATTCACAGATGAAATCCATTGCCACTGTGCTTCTGTTGCTTAACTTCTGCATGTATGTTATTATTTTGGGCATTGGAGGGTGGGCCATGAACAGAGCAATTGATCATGGCTTCATCATTGGTCCTGGGCTTAAACTTCCAGCACATTTTTCACCAATTTACTTCCCCATAGGGAATGCAGCCACTGGTTTCTTTGTGATATTTGCTTTGTTAGCTGCTGTGTTTGGAGCTGCCTCAGCAATCTCAGGACTTAACCATATTCGCTTTGCTTGGAAAGAGATTCAACTGGATCTCAGAAACTCAAGACTGGTAACAATGGAAGCCTTCTTCATTATTCTCTCAGCTACACAGCTTGTTTACATTATGACCATCCATGGTGCTGTGACCAAAAGATGAGAGCTGAATGCTTTAACATTTGTTTGATTCATTGCCCATTTTCAATTGTCTTTGGTGTTGTTTTCTTTTGTTGTAATTAACCATCTCTGTAAACCTTGCAAACATGCAAGGAGCTTAGTTTAGAAGATTATTCTTTTTGTGGTTTGTTGTGGTGATTTTATTTGTATAAATGTTGACAATAAACTTGGTTTGATGTTTGATTTAAAAGCTTCAGTCTTCCTCT

Coding sequence (CDS)

ATGGCTAATTCACAGATGAAATCCATTGCCACTGTGCTTCTGTTGCTTAACTTCTGCATGTATGTTATTATTTTGGGCATTGGAGGGTGGGCCATGAACAGAGCAATTGATCATGGCTTCATCATTGGTCCTGGGCTTAAACTTCCAGCACATTTTTCACCAATTTACTTCCCCATAGGGAATGCAGCCACTGGTTTCTTTGTGATATTTGCTTTGTTAGCTGCTGTGTTTGGAGCTGCCTCAGCAATCTCAGGACTTAACCATATTCGCTTTGCTTGGAAAGAGATTCAACTGGATCTCAGAAACTCAAGACTGGTAACAATGGAAGCCTTCTTCATTATTCTCTCAGCTACACAGCTTGTTTACATTATGACCATCCATGGTGCTGTGACCAAAAGATGA

Protein sequence

MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIGNAATGFFVIFALLAAVFGAASAISGLNHIRFAWKEIQLDLRNSRLVTMEAFFIILSATQLVYIMTIHGAVTKR

Homology

[Close]

BLAST of Cp4.1LG09g07720 vs. ExPASy Swiss-Prot
Match: Q6L4D2 (Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10
Identity = 51/151 (33.77%), Postives = 77/151 (50.99%), Query Frame = 0


Query: 7   KSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIGNAATGF 66
           +++   LL+LN  MY+I++G   W +N  I +G    PG+             GN AT +
Sbjct: 6   RTMIAPLLVLNLIMYLIVIGFASWNLNHYI-NGETNHPGV------------AGNGATFY 65

Query: 67  FVIFALLAAVFGAASAISGLNHIR---------------FAW-----------KEIQL-D 126
           F++FA+LA V GAAS ++G++H+R                AW           KEI +  
Sbjct: 66  FLVFAILAGVVGAASKLAGVHHVRSWGAHSLAAGAASALIAWAITALAFGLACKEIHIGG 125

Query: 127 LRNSRLVTMEAFFIILSATQLVYIMTIHGAV 131
            R  RL  +EAF IIL+ TQL+Y+  +HG +
Sbjct: 126 YRGWRLRVLEAFVIILAFTQLLYVAMLHGGL 143

[Close]

BLAST of Cp4.1LG09g07720 vs. NCBI nr
Match: XP_023542194.1 (membrane protein PM19L-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 242 bits (617), Expect = 9.24e-80
Identity = 133/159 (83.65%), Postives = 133/159 (83.65%), Query Frame = 0


Query: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60
           MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG
Sbjct: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60

Query: 61  NAATGFFVIFALLAAVFGAASAISGLNHIR--------------------------FAWK 120
           NAATGFFVIFALLAAVFGAASAISGLNHIR                          FAWK
Sbjct: 61  NAATGFFVIFALLAAVFGAASAISGLNHIRSWSAESFGAASSAAVFAWTLTLLAMGFAWK 120

Query: 121 EIQLDLRNSRLVTMEAFFIILSATQLVYIMTIHGAVTKR 133
           EIQLDLRNSRLVTMEAFFIILSATQLVYIMTIHGAVTKR
Sbjct: 121 EIQLDLRNSRLVTMEAFFIILSATQLVYIMTIHGAVTKR 159

[Close]

BLAST of Cp4.1LG09g07720 vs. NCBI nr
Match: XP_022955000.1 (uncharacterized protein LOC111457088 [Cucurbita moschata] >KAG6573343.1 Membrane protein PM19L, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012507.1 hypothetical protein SDJN02_25259 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235 bits (599), Expect = 5.12e-77
Identity = 129/159 (81.13%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60
           MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG
Sbjct: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60

Query: 61  NAATGFFVIFALLAAVFGAASAISGLNHIR--------------------------FAWK 120
           NAATGFFVIFALLAAVFGAAS ISGLNHIR                          FAWK
Sbjct: 61  NAATGFFVIFALLAAVFGAASGISGLNHIRSWSAESFGAASSAAVFAWTLTLLAMGFAWK 120

Query: 121 EIQLDLRNSRLVTMEAFFIILSATQLVYIMTIHGAVTKR 133
           EIQLDLRNSRLVTMEAFFIILSATQLVYIM IHGAVT +
Sbjct: 121 EIQLDLRNSRLVTMEAFFIILSATQLVYIMAIHGAVTTK 159

[Close]

BLAST of Cp4.1LG09g07720 vs. NCBI nr
Match: XP_022994911.1 (uncharacterized protein LOC111490495 [Cucurbita maxima])

HSP 1 Score: 233 bits (594), Expect = 2.96e-76
Identity = 128/159 (80.50%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60
           MANSQMK IAT+LLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG
Sbjct: 1   MANSQMKYIATLLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60

Query: 61  NAATGFFVIFALLAAVFGAASAISGLNHIR--------------------------FAWK 120
           NAATGFFVIFALLAAVFGAASAISGLNHIR                          FAWK
Sbjct: 61  NAATGFFVIFALLAAVFGAASAISGLNHIRSWSAESFGAASSAAVFAWTLTLLAMGFAWK 120

Query: 121 EIQLDLRNSRLVTMEAFFIILSATQLVYIMTIHGAVTKR 133
           EIQLDLRNSRLVTMEAFF+ILSATQLVYIM IHGAVT R
Sbjct: 121 EIQLDLRNSRLVTMEAFFMILSATQLVYIMAIHGAVTTR 159

[Close]

BLAST of Cp4.1LG09g07720 vs. NCBI nr
Match: XP_038895378.1 (membrane protein PM19L-like [Benincasa hispida])

HSP 1 Score: 215 bits (547), Expect = 4.29e-69
Identity = 118/159 (74.21%), Postives = 127/159 (79.87%), Query Frame = 0


Query: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60
           MA++QMKS+AT+LLLLNFCMY IILGIGGWAMN AIDHGFIIGPGL+LPAHFSPIYFP+G
Sbjct: 1   MASTQMKSVATLLLLLNFCMYAIILGIGGWAMNHAIDHGFIIGPGLRLPAHFSPIYFPMG 60

Query: 61  NAATGFFVIFALLAAVFGAASAISGLNHIR---------------FAW-----------K 120
           NAATGFFVIFALLAAVFGAASAISGLNHIR               FAW           K
Sbjct: 61  NAATGFFVIFALLAAVFGAASAISGLNHIRSWSAESLGAASTAAVFAWTLTILAMGFACK 120

Query: 121 EIQLDLRNSRLVTMEAFFIILSATQLVYIMTIHGAVTKR 133
           EI LD RN+RLVTMEAFFIILSATQLVYI+ IHGAV+ R
Sbjct: 121 EIALDFRNARLVTMEAFFIILSATQLVYIIAIHGAVSTR 159

[Close]

BLAST of Cp4.1LG09g07720 vs. NCBI nr
Match: XP_004147399.3 (membrane protein PM19L [Cucumis sativus] >KGN65936.2 hypothetical protein Csa_019559 [Cucumis sativus])

HSP 1 Score: 214 bits (546), Expect = 6.09e-69
Identity = 116/159 (72.96%), Postives = 125/159 (78.62%), Query Frame = 0


Query: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60
           MA++QMKS AT+LLLLNFCMYVIILGIGGWAMN+AIDHGFIIGPGL+LPAHFSPIYFP+G
Sbjct: 1   MASTQMKSFATLLLLLNFCMYVIILGIGGWAMNKAIDHGFIIGPGLRLPAHFSPIYFPMG 60

Query: 61  NAATGFFVIFALLAAVFGAASAISGLNHIR--------------------------FAWK 120
           NAATGFFV+FALLA VFGAASAISGLNHIR                          FAWK
Sbjct: 61  NAATGFFVLFALLAGVFGAASAISGLNHIRSWSVESLSAASSAAVFAWTLTILAMGFAWK 120

Query: 121 EIQLDLRNSRLVTMEAFFIILSATQLVYIMTIHGAVTKR 133
           EI LD RN+RLVTMEAFFIILSATQLVYIM IHG  + R
Sbjct: 121 EIALDFRNARLVTMEAFFIILSATQLVYIMAIHGDNSTR 159

[Close]

BLAST of Cp4.1LG09g07720 vs. ExPASy TrEMBL
Match: A0A6J1GTY5 (uncharacterized protein LOC111457088 OS=Cucurbita moschata OX=3662 GN=LOC111457088 PE=4 SV=1)

HSP 1 Score: 235 bits (599), Expect = 2.48e-77
Identity = 129/159 (81.13%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60
           MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG
Sbjct: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60

Query: 61  NAATGFFVIFALLAAVFGAASAISGLNHIR--------------------------FAWK 120
           NAATGFFVIFALLAAVFGAAS ISGLNHIR                          FAWK
Sbjct: 61  NAATGFFVIFALLAAVFGAASGISGLNHIRSWSAESFGAASSAAVFAWTLTLLAMGFAWK 120

Query: 121 EIQLDLRNSRLVTMEAFFIILSATQLVYIMTIHGAVTKR 133
           EIQLDLRNSRLVTMEAFFIILSATQLVYIM IHGAVT +
Sbjct: 121 EIQLDLRNSRLVTMEAFFIILSATQLVYIMAIHGAVTTK 159

[Close]

BLAST of Cp4.1LG09g07720 vs. ExPASy TrEMBL
Match: A0A6J1K0L0 (uncharacterized protein LOC111490495 OS=Cucurbita maxima OX=3661 GN=LOC111490495 PE=4 SV=1)

HSP 1 Score: 233 bits (594), Expect = 1.43e-76
Identity = 128/159 (80.50%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60
           MANSQMK IAT+LLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG
Sbjct: 1   MANSQMKYIATLLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60

Query: 61  NAATGFFVIFALLAAVFGAASAISGLNHIR--------------------------FAWK 120
           NAATGFFVIFALLAAVFGAASAISGLNHIR                          FAWK
Sbjct: 61  NAATGFFVIFALLAAVFGAASAISGLNHIRSWSAESFGAASSAAVFAWTLTLLAMGFAWK 120

Query: 121 EIQLDLRNSRLVTMEAFFIILSATQLVYIMTIHGAVTKR 133
           EIQLDLRNSRLVTMEAFF+ILSATQLVYIM IHGAVT R
Sbjct: 121 EIQLDLRNSRLVTMEAFFMILSATQLVYIMAIHGAVTTR 159

[Close]

BLAST of Cp4.1LG09g07720 vs. ExPASy TrEMBL
Match: A0A0A0LV01 (AWPM19-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G462030 PE=4 SV=1)

HSP 1 Score: 217 bits (552), Expect = 3.59e-70
Identity = 116/159 (72.96%), Postives = 126/159 (79.25%), Query Frame = 0


Query: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60
           MA++QMKS AT+LLLLNFCMYVIILGIGGWAMN+AIDHGFIIGPGL+LPAHFSPIYFP+G
Sbjct: 1   MASTQMKSFATLLLLLNFCMYVIILGIGGWAMNKAIDHGFIIGPGLRLPAHFSPIYFPMG 60

Query: 61  NAATGFFVIFALLAAVFGAASAISGLNHIR--------------------------FAWK 120
           NAATGFFV+FALLA VFGAASAISGLNHIR                          FAWK
Sbjct: 61  NAATGFFVLFALLAGVFGAASAISGLNHIRSWSVESLSAASSAAVFAWTLTILAMGFAWK 120

Query: 121 EIQLDLRNSRLVTMEAFFIILSATQLVYIMTIHGAVTKR 133
           EI LD RN+RLVTMEAFFIILSATQLVYIM IHG ++ R
Sbjct: 121 EIALDFRNARLVTMEAFFIILSATQLVYIMAIHGDISTR 159

[Close]

BLAST of Cp4.1LG09g07720 vs. ExPASy TrEMBL
Match: A5Y734 (AWPM19-like protein OS=Cucumis melo OX=3656 GN=LOC103487332 PE=4 SV=1)

HSP 1 Score: 214 bits (544), Expect = 5.94e-69
Identity = 117/159 (73.58%), Postives = 126/159 (79.25%), Query Frame = 0


Query: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60
           MA++QMKSIAT+LLLLNFCMYVIILGIGGWAMN+AIDHGFIIGPGL+LPAHFSPIYFP+G
Sbjct: 1   MASTQMKSIATLLLLLNFCMYVIILGIGGWAMNKAIDHGFIIGPGLRLPAHFSPIYFPMG 60

Query: 61  NAATGFFVIFALLAAVFGAASAISGLNHIR---------------FAW-----------K 120
           NAATGFFV FALLA VFGAASAISGLNHIR               FAW           K
Sbjct: 61  NAATGFFVTFALLAGVFGAASAISGLNHIRSWSVESLGAASSAAVFAWTLTILAMGFACK 120

Query: 121 EIQLDLRNSRLVTMEAFFIILSATQLVYIMTIHGAVTKR 133
           EI LD RN+RLVTMEAFFIILSATQLVYIM IHG ++ R
Sbjct: 121 EIALDFRNARLVTMEAFFIILSATQLVYIMAIHGVISTR 159

[Close]

BLAST of Cp4.1LG09g07720 vs. ExPASy TrEMBL
Match: A0A6J1CEV9 (uncharacterized protein LOC111010860 OS=Momordica charantia OX=3673 GN=LOC111010860 PE=4 SV=1)

HSP 1 Score: 204 bits (520), Expect = 2.69e-65
Identity = 111/159 (69.81%), Postives = 123/159 (77.36%), Query Frame = 0


Query: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60
           MAN+QMKSIAT+LLLLNFCMY +ILGIGGWAMN AIDHGF+IGP  +LPAHFSPIYFP+G
Sbjct: 1   MANTQMKSIATLLLLLNFCMYAVILGIGGWAMNTAIDHGFVIGPDFRLPAHFSPIYFPMG 60

Query: 61  NAATGFFVIFALLAAVFGAASAISGLNHIR---------------FAW-----------K 120
           NAATGFFV FALLAAVFGAASAISGLNHIR               FAW           K
Sbjct: 61  NAATGFFVTFALLAAVFGAASAISGLNHIRSWSVDSLGAASSAAVFAWTLTILAMGFACK 120

Query: 121 EIQLDLRNSRLVTMEAFFIILSATQLVYIMTIHGAVTKR 133
           EI+LD R++RL+TMEAFFIILS TQL+YIM IHGA + R
Sbjct: 121 EIELDFRSTRLITMEAFFIILSVTQLLYIMAIHGAPSIR 159

[Close]

BLAST of Cp4.1LG09g07720 vs. TAIR 10
Match: AT1G29520.1 (AWPM-19-like family protein )

HSP 1 Score: 184.1 bits (466), Expect = 7.3e-47
Identity = 98/154 (63.64%), Postives = 112/154 (72.73%), Query Frame = 0


Query: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60
           MA  Q+K +A+ LL+LNFCMYVI+LGIGGWAMNRAIDHGF +GP L+LPAHFSPIYFP+G
Sbjct: 1   MAGEQIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMG 60

Query: 61  NAATGFFVIFALLAAVFGAASAISGLNHIR--------------------------FAWK 120
           NAATGFFVIFALLA V GAAS ISGL+HIR                          FAWK
Sbjct: 61  NAATGFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK 120

Query: 121 EIQLDLRNSRLVTMEAFFIILSATQLVYIMTIHG 129
           EI+L  RN++L TMEAF IILS TQL+YI  +HG
Sbjct: 121 EIELQGRNAKLRTMEAFLIILSVTQLIYIAAVHG 154

[Close]

BLAST of Cp4.1LG09g07720 vs. TAIR 10
Match: AT5G46530.1 (AWPM-19-like family protein )

HSP 1 Score: 160.6 bits (405), Expect = 8.6e-40
Identity = 85/154 (55.19%), Postives = 107/154 (69.48%), Query Frame = 0


Query: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60
           M   QMK +A+ LL+LNFCMY I+LGIG W+MN+AI+HGF+IG    LPAHFSPI+FP+G
Sbjct: 1   MVEHQMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMG 60

Query: 61  NAATGFFVIFALLAAVFGAASAISGLNHIR--------------------------FAWK 120
           NAATGFF++FAL+A V GAAS ISG++H++                          F  K
Sbjct: 61  NAATGFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGCK 120

Query: 121 EIQLDLRNSRLVTMEAFFIILSATQLVYIMTIHG 129
           EI+L +RN+RL TMEAF IILSATQL+YI  I+G
Sbjct: 121 EIELGMRNARLRTMEAFLIILSATQLLYIAAIYG 154

[Close]

BLAST of Cp4.1LG09g07720 vs. TAIR 10
Match: AT5G18970.1 (AWPM-19-like family protein )

HSP 1 Score: 85.9 bits (211), Expect = 2.7e-17
Identity = 58/156 (37.18%), Postives = 79/156 (50.64%), Query Frame = 0


Query: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60
           MA+   KS A +LL+LN  +Y +I  I  WA+N  I+        L LPA   PIYFP+G
Sbjct: 1   MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60

Query: 61  NAATGFFVIFALLAAVFGAASAISGLNHI--------------------------RFAWK 120
           N ATGFFVIF L+A V G A++++G+ ++                            A K
Sbjct: 61  NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120

Query: 121 EIQLDLRNSRLVTMEAFFIILSATQLVYIMTIHGAV 131
           EI +    + L T+E   II+SATQL+    IH  V
Sbjct: 121 EINIGWTEANLRTLEVLTIIVSATQLLCTGAIHAGV 156

[Close]

BLAST of Cp4.1LG09g07720 vs. TAIR 10
Match: AT1G04560.1 (AWPM-19-like family protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13
Identity = 58/154 (37.66%), Postives = 77/154 (50.00%), Query Frame = 0


Query: 1   MANSQMKSIATVLLLLNFCMYVIILGIGGWAMNRAIDHGFIIGPGLKLPAHFSPIYFPIG 60
           MA +  ++IA  LL LN  MY+I+LG   W +N+ I+       G      F       G
Sbjct: 1   MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYIN-------GQTNHPSFG------G 60

Query: 61  NAATGFFVIFALLAAVFGAASAISGLNHIRF---------------AW-----------K 120
           N AT FF+ F++LAAV G AS ++G NHIRF               AW           K
Sbjct: 61  NGATPFFLTFSILAAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACK 120

Query: 121 EIQL-DLRNSRLVTMEAFFIILSATQLVYIMTIH 128
           +I +   R  RL  +EAF IIL+ TQL+Y+M IH
Sbjct: 121 QINIGGWRGWRLKMIEAFIIILTFTQLLYLMLIH 141

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g07720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6L4D2	1.4e-10	33.77	Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV...	[more]

BLAST of Cp4.1LG09g07720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542194.1	9.24e-80	83.65	membrane protein PM19L-like [Cucurbita pepo subsp. pepo]	[more]
XP_022955000.1	5.12e-77	81.13	uncharacterized protein LOC111457088 [Cucurbita moschata] >KAG6573343.1 Membrane...	[more]
XP_022994911.1	2.96e-76	80.50	uncharacterized protein LOC111490495 [Cucurbita maxima]	[more]
XP_038895378.1	4.29e-69	74.21	membrane protein PM19L-like [Benincasa hispida]	[more]
XP_004147399.3	6.09e-69	72.96	membrane protein PM19L [Cucumis sativus] >KGN65936.2 hypothetical protein Csa_01...	[more]

BLAST of Cp4.1LG09g07720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GTY5	2.48e-77	81.13	uncharacterized protein LOC111457088 OS=Cucurbita moschata OX=3662 GN=LOC1114570...	[more]
A0A6J1K0L0	1.43e-76	80.50	uncharacterized protein LOC111490495 OS=Cucurbita maxima OX=3661 GN=LOC111490495...	[more]
A0A0A0LV01	3.59e-70	72.96	AWPM19-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G462030 PE=4 SV=1	[more]
A5Y734	5.94e-69	73.58	AWPM19-like protein OS=Cucumis melo OX=3656 GN=LOC103487332 PE=4 SV=1	[more]
A0A6J1CEV9	2.69e-65	69.81	uncharacterized protein LOC111010860 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]

BLAST of Cp4.1LG09g07720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29520.1	7.3e-47	63.64	AWPM-19-like family protein	[more]
AT5G46530.1	8.6e-40	55.19	AWPM-19-like family protein	[more]
AT5G18970.1	2.7e-17	37.18	AWPM-19-like family protein	[more]
AT1G04560.1	1.1e-13	37.66	AWPM-19-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 15..90 e-value: 1.6E-29 score: 102.9 coord: 91..129 e-value: 7.7E-11 score: 42.4
IPR008390	AWPM-19-like	PANTHER	PTHR33294	AWPM-19-LIKE FAMILY PROTEIN	coord: 91..131 coord: 1..90
None	No IPR available	PANTHER	PTHR33294:SF6	AWPM-19-LIKE FAMILY PROTEIN	coord: 1..90
None	No IPR available	PANTHER	PTHR33294:SF6	AWPM-19-LIKE FAMILY PROTEIN	coord: 91..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g07720.1	Cp4.1LG09g07720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane