Cp4.1LG09g07220 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG09g07220
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionnon-classical arabinogalactan protein 31-like
LocationCp4.1LG09: 6649193 .. 6650212 (-)
RNA-Seq ExpressionCp4.1LG09g07220
SyntenyCp4.1LG09g07220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCACCGAGCCAATCTCCGATTCCCCACCACCTTCCCCCGTCGAGCGAGTCTCCGATCCCCCACCAACCACCAAGCCAATCTCCAGTTCCCCACCACCTTCCCCCGTCGAGTGAGTCTCCGATCCCCCACCATCCACCGAGCCAATCTCCGGTTCCCCACCACCTTCCCCCATCGAGTGAGTCTCCGACCCCCCACCATCCACCGAGCCAATCTCCAGTTCCCCACCACCTTCCCCCGTCGAGTGAGTCTCCGATCCCCCACCAGCCACCGAGCCAATCTCCGGTTCCCCACCACCTCCCTCCTTCCCCTTCGCCTCACTACGCCCCCGTTGAGCCACCTAAACCGCATACCTACCATCAAAGAAGGTCCATCGAAGTCGAAGGTGTTGTTTATTGTAAGTCTTGCAAGTACCCCGGTGTTGAAACCCTTCTCGATGCTAAACCGCTTTCAGGTTAGTTCGAAAAATAACATTTTTACTTACGAATCATTAGATTTAATATAAACCCACTTAAGTTTTAGCGCATATTTTACATGTAACCCGTGCATTGTTCTAAATTTGATATCGATTGTTGTTTGTTTACTAAAAGCGTTTATTCACATTGTCTAATAACGAACCTCGTATTGTATGAAATTGGCTACTTTCAACGTAAGATCTCTCGAAAACACCTGGTATCAATAGAAATAGTATCACTTATTTATATATCTATGATCGTTGCAGGTGCTATGGTACAAATGACATGCAAGAACACCAAGCATTCTCGAGTAGTTGTGACAGCCACCACGGACAATAACGGCTACTTCTGGCTAGCATCGAAGGACGTGTCAAGCCACGCATACCACCGATGCAAGGTTTATAATGTGAAGTCATCGGACAAGAATTGCACTATAACGTCGAAAATGAACGGCGGAATAGAGGGGGCGGAGTTGAAGCCGGTAAAGGCATTCTTGGACGTTGAGAAGAAACCGGTTGTGCTTTACCGTGTTGGACCATTAGCATACGAACCCACCTGTCCACGTTGA

mRNA sequence

CCACCGAGCCAATCTCCGATTCCCCACCACCTTCCCCCGTCGAGCGAGTCTCCGATCCCCCACCAACCACCAAGCCAATCTCCAGTTCCCCACCACCTTCCCCCGTCGAGTGAGTCTCCGATCCCCCACCATCCACCGAGCCAATCTCCGGTTCCCCACCACCTTCCCCCATCGAGTGAGTCTCCGACCCCCCACCATCCACCGAGCCAATCTCCAGTTCCCCACCACCTTCCCCCGTCGAGTGTTGTTTATTGTAAGTCTTGCAAGTACCCCGGTGTTGAAACCCTTCTCGATGCTAAACCGCTTTCAGGTGCTATGGTACAAATGACATGCAAGAACACCAAGCATTCTCGAGTAGTTGTGACAGCCACCACGGACAATAACGGCTACTTCTGGCTAGCATCGAAGGACGTGTCAAGCCACGCATACCACCGATGCAAGGTTTATAATGTGAAGTCATCGGACAAGAATTGCACTATAACGTCGAAAATGAACGGCGGAATAGAGGGGGCGGAGTTGAAGCCGGTAAAGGCATTCTTGGACGTTGAGAAGAAACCGGTTGTGCTTTACCGTGTTGGACCATTAGCATACGAACCCACCTGTCCACGTTGA

Coding sequence (CDS)

CCACCGAGCCAATCTCCGATTCCCCACCACCTTCCCCCGTCGAGCGAGTCTCCGATCCCCCACCAACCACCAAGCCAATCTCCAGTTCCCCACCACCTTCCCCCGTCGAGTGAGTCTCCGATCCCCCACCATCCACCGAGCCAATCTCCGGTTCCCCACCACCTTCCCCCATCGAGTGAGTCTCCGACCCCCCACCATCCACCGAGCCAATCTCCAGTTCCCCACCACCTTCCCCCGTCGAGTGTTGTTTATTGTAAGTCTTGCAAGTACCCCGGTGTTGAAACCCTTCTCGATGCTAAACCGCTTTCAGGTGCTATGGTACAAATGACATGCAAGAACACCAAGCATTCTCGAGTAGTTGTGACAGCCACCACGGACAATAACGGCTACTTCTGGCTAGCATCGAAGGACGTGTCAAGCCACGCATACCACCGATGCAAGGTTTATAATGTGAAGTCATCGGACAAGAATTGCACTATAACGTCGAAAATGAACGGCGGAATAGAGGGGGCGGAGTTGAAGCCGGTAAAGGCATTCTTGGACGTTGAGAAGAAACCGGTTGTGCTTTACCGTGTTGGACCATTAGCATACGAACCCACCTGTCCACGTTGA

Protein sequence

PPSQSPIPHHLPPSSESPIPHQPPSQSPVPHHLPPSSESPIPHHPPSQSPVPHHLPPSSESPTPHHPPSQSPVPHHLPPSSVVYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWLASKDVSSHAYHRCKVYNVKSSDKNCTITSKMNGGIEGAELKPVKAFLDVEKKPVVLYRVGPLAYEPTCPR
Homology
BLAST of Cp4.1LG09g07220 vs. ExPASy Swiss-Prot
Match: Q9FZA2 (Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP31 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.4e-24
Identity = 81/212 (38.21%), Postives = 124/212 (58.49%), Query Frame = 0

Query: 1   PPSQSPIPHHLPPSSESPIPHQPPSQSPVPHHLPPSSESPI--PHHPPSQSPVPHHLPPS 60
           PP++ P+   + P +++P+  +PP++ PV   + P ++ P+  P +PP+++PV   + P 
Sbjct: 154 PPTKPPVKPPVYPPTKAPV--KPPTKPPVKPPVSPPAKPPVKPPVYPPTKAPVKPPVSPP 213

Query: 61  SESPT--PHHPPSQSPVPHHLPPSSVVYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTKH 120
           ++ P   P +PP  +     +     VYCKSCKY    TLL AKP+ GA V++ CK+ K+
Sbjct: 214 TKPPVTPPVYPPKFN--RSLVAVRGTVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKKN 273

Query: 121 SRVVVTATTDNNGYF-WLASKDVSSHAYHRCKVYNVKSSDKNCTITSKMNGGIEGAELKP 180
             +    TTD NGYF  LA K V++  +  C+VY VKS D  C+  SK+ GG  GAELKP
Sbjct: 274 --ITAETTTDKNGYFLLLAPKTVTNFGFRGCRVYLVKSKDYKCSKVSKLFGGDVGAELKP 333

Query: 181 V----KAFLDVEKKPVVLYRVGPLAYEPTCPR 204
                K+ + V K    L+ VGP A+ P+CP+
Sbjct: 334 EKKLGKSTVVVNKLVYGLFNVGPFAFNPSCPK 359

BLAST of Cp4.1LG09g07220 vs. ExPASy Swiss-Prot
Match: P93013 (Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP30 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 8.1e-18
Identity = 77/215 (35.81%), Postives = 116/215 (53.95%), Query Frame = 0

Query: 1   PPSQSP---IPHHLPPSSESPIPHQPPSQSPVPHHLPPSSESPI--PHHPPSQSPVPHHL 60
           P S  P   +P HL P     +P  PP+++P+     P +++PI  P  PP+++P+    
Sbjct: 30  PGSSDPFHSLPQHL-PLPPIKLPTLPPAKAPIKLPAYPPAKAPIKLPTLPPAKAPIKLPT 89

Query: 61  PPSSESPT--PHHPPSQSPVPHHLPPSSVVYCKSCKYPGVETLLDAKPLSGAMVQMTCKN 120
            P  + P   P +PP  +     +    VVYCK+CKY GV  +  AKP+  A+V++ CKN
Sbjct: 90  LPPIKPPVLPPVYPPKYNKT--LVAVRGVVYCKACKYAGVNNVQGAKPVKDAVVRLVCKN 149

Query: 121 TKHSRVVVTATTDNNGYFW-LASKDVSSHAYHRCKVYNVKSSDKNCTITSKMNGGIEGAE 180
            K+S  +    TD NGYF  LA K V+++    C+ + VKS D  C+  S ++ G +G+ 
Sbjct: 150 KKNS--ISETKTDKNGYFMLLAPKTVTNYDIKGCRAFLVKSPDTKCSKVSSLHDGGKGSV 209

Query: 181 LKPV--KAFLDVEKK--PVVLYRVGPLAYEPTCPR 204
           LKPV    F     +     +Y VGP A+EPTCP+
Sbjct: 210 LKPVLKPGFSSTIMRWFKYSVYNVGPFAFEPTCPK 239

BLAST of Cp4.1LG09g07220 vs. ExPASy Swiss-Prot
Match: Q03211 (Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.4e-14
Identity = 85/250 (34.00%), Postives = 115/250 (46.00%), Query Frame = 0

Query: 1   PPSQSPIPHHLPPSSESPIP---HQPP-------SQSPVPHHLPPSSESPIP-------- 60
           PP++ P P   PP  ++P P    QPP       + SP P   PP+ + P P        
Sbjct: 172 PPAKQPSPPPPPPPVKAPSPSPAKQPPPPPPPVKAPSPSPATQPPTKQPPPPPRAKKSPL 231

Query: 61  -------HHPPSQSPVPHHLPPSSESP-------TPHHPP-----SQSPVPHHLPP---- 120
                   +PP  +P P    P++E P        P +PP        PV   LPP    
Sbjct: 232 LPPPPPVAYPPVMTPSP---SPAAEPPIIAPFPSPPANPPLIPRRPAPPVVKPLPPLGKP 291

Query: 121 ---SSVVYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWLASK 180
              S +VYCKSC   GV TLL+A  L GA+V++ C   K   +V  ATTDN G F +  K
Sbjct: 292 PIVSGLVYCKSCNSYGVPTLLNASLLQGAVVKLICYGKK--TMVQWATTDNKGEFRIMPK 351

Query: 181 DVSSHAYHRCKVYNVKSSDKNCTITSKMNGGIEGAELKPV--------KAFLDVEKKPVV 199
            +++    +CKVY VKS + NC + +  NGG  G  LKP+         A + V+     
Sbjct: 352 SLTTADVGKCKVYLVKSPNPNCNVPTNFNGGKSGGLLKPLLPPKQPITPAVVPVQPPMSD 411

BLAST of Cp4.1LG09g07220 vs. NCBI nr
Match: XP_023542178.1 (non-classical arabinogalactan protein 30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 385 bits (990), Expect = 4.31e-133
Identity = 203/250 (81.20%), Postives = 203/250 (81.20%), Query Frame = 0

Query: 1   PPSQSPIPHHLPPSSESPIPHQPPSQSPVPHHLPPSSESPIPHHPPSQSPVPHHLPPSSE 60
           PPSQSPIPHHLPPSSESPIPHQPPSQSPVPHHLPPSSESPIPHHPPSQSPVPHHLPPSSE
Sbjct: 60  PPSQSPIPHHLPPSSESPIPHQPPSQSPVPHHLPPSSESPIPHHPPSQSPVPHHLPPSSE 119

Query: 61  SPTPHHPPSQSPVPHHLPPSS--------------------------------------- 120
           SPTPHHPPSQSPVPHHLPPSS                                       
Sbjct: 120 SPTPHHPPSQSPVPHHLPPSSESPIPHQPPSQSPVPHHLPPSPSPHYAPVEPPKPHTYHQ 179

Query: 121 --------VVYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWL 180
                   VVYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWL
Sbjct: 180 RRSIEVEGVVYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWL 239

Query: 181 ASKDVSSHAYHRCKVYNVKSSDKNCTITSKMNGGIEGAELKPVKAFLDVEKKPVVLYRVG 203
           ASKDVSSHAYHRCKVYNVKSSDKNCTITSKMNGGIEGAELKPVKAFLDVEKKPVVLYRVG
Sbjct: 240 ASKDVSSHAYHRCKVYNVKSSDKNCTITSKMNGGIEGAELKPVKAFLDVEKKPVVLYRVG 299

BLAST of Cp4.1LG09g07220 vs. NCBI nr
Match: XP_022955047.1 (non-classical arabinogalactan protein 31-like [Cucurbita moschata])

HSP 1 Score: 361 bits (927), Expect = 7.78e-124
Identity = 188/228 (82.46%), Postives = 193/228 (84.65%), Query Frame = 0

Query: 1   PPSQSPIPHHLPPSSESPIPHQPPSQSPVPHHLPPSSESPIPHHPPSQSPVPHHLPPSSE 60
           PPSQSP+PH LPPSSESPIPHQPPSQS  PHHLPP+SESPIPH PPSQSPVPH LPPSSE
Sbjct: 60  PPSQSPVPHPLPPSSESPIPHQPPSQSLAPHHLPPTSESPIPHQPPSQSPVPHPLPPSSE 119

Query: 61  SPTPHHPPSQSPVPHHLPPS-------------------------SVVYCKSCKYPGVET 120
           SP PH PPSQSPVPHHLPPS                          VVYCKSCKYPGVET
Sbjct: 120 SPIPHQPPSQSPVPHHLPPSPSPHYAPVEPPKPHTYHQRRSIEVEGVVYCKSCKYPGVET 179

Query: 121 LLDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWLASKDVSSHAYHRCKVYNVKSSD 180
           LLDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWLA+KDVSSHAYHRCKVYNVKSS+
Sbjct: 180 LLDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWLATKDVSSHAYHRCKVYNVKSSN 239

Query: 181 KNCTITSKMNGGIEGAELKPVKAFLDVEKKPVVLYRVGPLAYEPTCPR 203
           KNCTITSKMNGGIEGAEL+PVKAFLD EKKPVVLY VGPLAYEPTCPR
Sbjct: 240 KNCTITSKMNGGIEGAELRPVKAFLDAEKKPVVLYSVGPLAYEPTCPR 287

BLAST of Cp4.1LG09g07220 vs. NCBI nr
Match: XP_022994866.1 (non-classical arabinogalactan protein 31-like [Cucurbita maxima])

HSP 1 Score: 333 bits (853), Expect = 3.11e-113
Identity = 172/205 (83.90%), Postives = 180/205 (87.80%), Query Frame = 0

Query: 5   SPIPHHLPPSSESPIPHQPPSQSPVPHHLPPSSESPIPHHPPSQSPVPHHLPPSSESPTP 64
           +P PHHL PSSESPIPHQPPSQSPVPHHLPP SESPIPH PPSQSPVPHHLPPS   P+P
Sbjct: 42  APSPHHLAPSSESPIPHQPPSQSPVPHHLPPPSESPIPHQPPSQSPVPHHLPPS---PSP 101

Query: 65  HHPPSQSPVPH------HLPPSSVVYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTKHSR 124
           H+ P + P PH       +    VVYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTK+SR
Sbjct: 102 HYAPVEPPKPHTYHQRRSIEVEGVVYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTKYSR 161

Query: 125 VVVTATTDNNGYFWLASKDVSSHAYHRCKVYNVKSSDKNCTITSKMNGGIEGAELKPVKA 184
           VVV ATTDNNGYFWLA+KDVSSHAYHRCKVYNVKSS+KNCTITSKMNGGIEGAELKPVKA
Sbjct: 162 VVVIATTDNNGYFWLAAKDVSSHAYHRCKVYNVKSSNKNCTITSKMNGGIEGAELKPVKA 221

Query: 185 FLDVEKKPVVLYRVGPLAYEPTCPR 203
           FLD EKKPVVLY VGPLAYEPTCPR
Sbjct: 222 FLDAEKKPVVLYSVGPLAYEPTCPR 243

BLAST of Cp4.1LG09g07220 vs. NCBI nr
Match: KAG7012566.1 (Non-classical arabinogalactan protein 31, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 332 bits (851), Expect = 1.49e-112
Identity = 178/226 (78.76%), Postives = 182/226 (80.53%), Query Frame = 0

Query: 5   SPIPHHLPPSSESPIPHQPPSQSPVPHHLPPSSESPIPHHPPSQSPVPHHLPPS---SES 64
           +P P HLPPSSESPIPHQPPSQSPVPH LPPSSESPIPH PPSQSPVPHHLPPS   S S
Sbjct: 42  APSPQHLPPSSESPIPHQPPSQSPVPHPLPPSSESPIPHQPPSQSPVPHHLPPSTPQSPS 101

Query: 65  PTPHHPPSQSPVPHHLPPS-------------------------SVVYCKSCKYPGVETL 124
           P P     QS  PHHLPPS                          VVYCKSCKYPGVETL
Sbjct: 102 PLPRRVSLQSSPPHHLPPSPSPHYAPVEPPKPHTYHQRRSIEVEGVVYCKSCKYPGVETL 161

Query: 125 LDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWLASKDVSSHAYHRCKVYNVKSSDK 184
           LDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWLA+KDVSSHAYHRCKVYNVKSS+K
Sbjct: 162 LDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWLATKDVSSHAYHRCKVYNVKSSNK 221

Query: 185 NCTITSKMNGGIEGAELKPVKAFLDVEKKPVVLYRVGPLAYEPTCP 202
           NCTITSKMNGGIEGAEL+PVKAFLD EKKPVVLY VGPLAYEPTCP
Sbjct: 222 NCTITSKMNGGIEGAELRPVKAFLDAEKKPVVLYSVGPLAYEPTCP 267

BLAST of Cp4.1LG09g07220 vs. NCBI nr
Match: KAG6573405.1 (Non-classical arabinogalactan protein 31, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191 bits (485), Expect = 2.19e-59
Identity = 89/94 (94.68%), Postives = 92/94 (97.87%), Query Frame = 0

Query: 109 MTCKNTKHSRVVVTATTDNNGYFWLASKDVSSHAYHRCKVYNVKSSDKNCTITSKMNGGI 168
           MTCKNTKHSRVVVTATTDNNGYFWLA+KDVSSHAYHRCKVYNVKSS+KNCTITSKMNGGI
Sbjct: 1   MTCKNTKHSRVVVTATTDNNGYFWLATKDVSSHAYHRCKVYNVKSSNKNCTITSKMNGGI 60

Query: 169 EGAELKPVKAFLDVEKKPVVLYRVGPLAYEPTCP 202
           EGAEL+PVKAFLD EKKPVVLY VGPLAYEPTCP
Sbjct: 61  EGAELRPVKAFLDAEKKPVVLYSVGPLAYEPTCP 94

BLAST of Cp4.1LG09g07220 vs. ExPASy TrEMBL
Match: A0A6J1GSI4 (non-classical arabinogalactan protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111457125 PE=4 SV=1)

HSP 1 Score: 361 bits (927), Expect = 3.77e-124
Identity = 188/228 (82.46%), Postives = 193/228 (84.65%), Query Frame = 0

Query: 1   PPSQSPIPHHLPPSSESPIPHQPPSQSPVPHHLPPSSESPIPHHPPSQSPVPHHLPPSSE 60
           PPSQSP+PH LPPSSESPIPHQPPSQS  PHHLPP+SESPIPH PPSQSPVPH LPPSSE
Sbjct: 60  PPSQSPVPHPLPPSSESPIPHQPPSQSLAPHHLPPTSESPIPHQPPSQSPVPHPLPPSSE 119

Query: 61  SPTPHHPPSQSPVPHHLPPS-------------------------SVVYCKSCKYPGVET 120
           SP PH PPSQSPVPHHLPPS                          VVYCKSCKYPGVET
Sbjct: 120 SPIPHQPPSQSPVPHHLPPSPSPHYAPVEPPKPHTYHQRRSIEVEGVVYCKSCKYPGVET 179

Query: 121 LLDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWLASKDVSSHAYHRCKVYNVKSSD 180
           LLDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWLA+KDVSSHAYHRCKVYNVKSS+
Sbjct: 180 LLDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWLATKDVSSHAYHRCKVYNVKSSN 239

Query: 181 KNCTITSKMNGGIEGAELKPVKAFLDVEKKPVVLYRVGPLAYEPTCPR 203
           KNCTITSKMNGGIEGAEL+PVKAFLD EKKPVVLY VGPLAYEPTCPR
Sbjct: 240 KNCTITSKMNGGIEGAELRPVKAFLDAEKKPVVLYSVGPLAYEPTCPR 287

BLAST of Cp4.1LG09g07220 vs. ExPASy TrEMBL
Match: A0A6J1K0H2 (non-classical arabinogalactan protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC111490464 PE=4 SV=1)

HSP 1 Score: 333 bits (853), Expect = 1.51e-113
Identity = 172/205 (83.90%), Postives = 180/205 (87.80%), Query Frame = 0

Query: 5   SPIPHHLPPSSESPIPHQPPSQSPVPHHLPPSSESPIPHHPPSQSPVPHHLPPSSESPTP 64
           +P PHHL PSSESPIPHQPPSQSPVPHHLPP SESPIPH PPSQSPVPHHLPPS   P+P
Sbjct: 42  APSPHHLAPSSESPIPHQPPSQSPVPHHLPPPSESPIPHQPPSQSPVPHHLPPS---PSP 101

Query: 65  HHPPSQSPVPH------HLPPSSVVYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTKHSR 124
           H+ P + P PH       +    VVYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTK+SR
Sbjct: 102 HYAPVEPPKPHTYHQRRSIEVEGVVYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTKYSR 161

Query: 125 VVVTATTDNNGYFWLASKDVSSHAYHRCKVYNVKSSDKNCTITSKMNGGIEGAELKPVKA 184
           VVV ATTDNNGYFWLA+KDVSSHAYHRCKVYNVKSS+KNCTITSKMNGGIEGAELKPVKA
Sbjct: 162 VVVIATTDNNGYFWLAAKDVSSHAYHRCKVYNVKSSNKNCTITSKMNGGIEGAELKPVKA 221

Query: 185 FLDVEKKPVVLYRVGPLAYEPTCPR 203
           FLD EKKPVVLY VGPLAYEPTCPR
Sbjct: 222 FLDAEKKPVVLYSVGPLAYEPTCPR 243

BLAST of Cp4.1LG09g07220 vs. ExPASy TrEMBL
Match: A0A5A7URZ5 (Non-classical arabinogalactan protein 31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00870 PE=4 SV=1)

HSP 1 Score: 190 bits (482), Expect = 3.50e-57
Identity = 107/183 (58.47%), Postives = 126/183 (68.85%), Query Frame = 0

Query: 43  HHPPSQSPVPHHLPPSSES---------PTPHHPPSQSPVP---HHLPPSS--------- 102
           HH PSQSP  HH P S            PT H+ P  SPVP   H   PS+         
Sbjct: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPFPPTAHYAPVPSPVPSPVHSPKPSTYVPRSFVEV 120

Query: 103 --VVYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWLAS-KDV 162
             VVYCKSCKYPGV+TLL AKPLSGA V+++CKNTK++  V TAT+D NGYF LA+ K+V
Sbjct: 121 QGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNV 180

Query: 163 SSHAYHRCKVYNVKSSDKNCTITSKMNGGIEGAELKPVKAFLDVEKKPVVLYRVGPLAYE 201
           +S+A+HRCKVY V+S D NC   SK+NGG +GAELKP +AF D EKKPVVLY VGPLA+E
Sbjct: 181 TSYAFHRCKVYLVESPDSNCKKASKLNGGEDGAELKPARAFTDEEKKPVVLYNVGPLAFE 240

BLAST of Cp4.1LG09g07220 vs. ExPASy TrEMBL
Match: A0A1S3B5Q3 (non-classical arabinogalactan protein 31 OS=Cucumis melo OX=3656 GN=LOC103486459 PE=4 SV=1)

HSP 1 Score: 190 bits (482), Expect = 3.50e-57
Identity = 107/183 (58.47%), Postives = 126/183 (68.85%), Query Frame = 0

Query: 43  HHPPSQSPVPHHLPPSSES---------PTPHHPPSQSPVP---HHLPPSS--------- 102
           HH PSQSP  HH P S            PT H+ P  SPVP   H   PS+         
Sbjct: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPFPPTAHYAPVPSPVPSPVHSPKPSTYVPRSFVEV 120

Query: 103 --VVYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWLAS-KDV 162
             VVYCKSCKYPGV+TLL AKPLSGA V+++CKNTK++  V TAT+D NGYF LA+ K+V
Sbjct: 121 QGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNV 180

Query: 163 SSHAYHRCKVYNVKSSDKNCTITSKMNGGIEGAELKPVKAFLDVEKKPVVLYRVGPLAYE 201
           +S+A+HRCKVY V+S D NC   SK+NGG +GAELKP +AF D EKKPVVLY VGPLA+E
Sbjct: 181 TSYAFHRCKVYLVESPDSNCKKASKLNGGEDGAELKPARAFTDEEKKPVVLYNVGPLAFE 240

BLAST of Cp4.1LG09g07220 vs. ExPASy TrEMBL
Match: A0A6J1EHN2 (non-classical arabinogalactan protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111434378 PE=4 SV=1)

HSP 1 Score: 189 bits (481), Expect = 3.77e-57
Identity = 107/182 (58.79%), Postives = 127/182 (69.78%), Query Frame = 0

Query: 43  HHPPSQSPVPHHLPPSSESPTP----------HHPPSQSPVPH-----HLPPS-----SV 102
           HHPPSQSP+ HH    S SP P          H+ P  SPV       ++P S      V
Sbjct: 58  HHPPSQSPIYHH---HSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGV 117

Query: 103 VYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTKHSRVVVTATTDNNGYFWLAS-KDVSSH 162
           VYCKSC YPGV+TLL AKPL+GA V+++CKNTK++  + TATTD NGYF LA+ K+V+S+
Sbjct: 118 VYCKSCHYPGVDTLLGAKPLNGATVKLSCKNTKYAPTMETATTDKNGYFRLAAPKNVTSY 177

Query: 163 AYHRCKVYNVKSSDKNCTITSKMNGGIEGAELKPVKAFLDVEKKPVVLYRVGPLAYEPTC 203
           A+HRCKVY VKS D +C   SKMNGG +GAELKP KAF D EKKPVVLY VGPLA+EPTC
Sbjct: 178 AFHRCKVYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTC 236

BLAST of Cp4.1LG09g07220 vs. TAIR 10
Match: AT1G28290.2 (arabinogalactan protein 31 )

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-25
Identity = 85/220 (38.64%), Postives = 122/220 (55.45%), Query Frame = 0

Query: 1   PPSQSPIPHHLPPSSESPI--PHQPPSQSPVPHHLPPSSESPIPHHPPSQSPVPHHLPPS 60
           PP++ P+   + P ++ P+  P  PP+++PV     P  + P+  +PP++ PV  + P  
Sbjct: 102 PPTKPPVKPPVSPPAKPPVKPPVYPPTKAPVKPPTKPPVKPPV--YPPTKPPV--YPPTK 161

Query: 61  SESPTPHHPPSQSPV-PHHLPPS---------SVVYCKSCKYPGVETLLDAKPLSGAMVQ 120
           +    P  PP++ PV P   PP            VYCKSCKY    TLL AKP+ GA V+
Sbjct: 162 APVKPPVSPPTKPPVTPPVYPPKFNRSLVAVRGTVYCKSCKYAAFNTLLGAKPIEGATVK 221

Query: 121 MTCKNTKHSRVVVTATTDNNGYF-WLASKDVSSHAYHRCKVYNVKSSDKNCTITSKMNGG 180
           + CK+ K+  +    TTD NGYF  LA K V++  +  C+VY VKS D  C+  SK+ GG
Sbjct: 222 LVCKSKKN--ITAETTTDKNGYFLLLAPKTVTNFGFRGCRVYLVKSKDYKCSKVSKLFGG 281

Query: 181 IEGAELKPV----KAFLDVEKKPVVLYRVGPLAYEPTCPR 204
             GAELKP     K+ + V K    L+ VGP A+ P+CP+
Sbjct: 282 DVGAELKPEKKLGKSTVVVNKLVYGLFNVGPFAFNPSCPK 315

BLAST of Cp4.1LG09g07220 vs. TAIR 10
Match: AT1G28290.1 (arabinogalactan protein 31 )

HSP 1 Score: 112.8 bits (281), Expect = 3.1e-25
Identity = 81/212 (38.21%), Postives = 124/212 (58.49%), Query Frame = 0

Query: 1   PPSQSPIPHHLPPSSESPIPHQPPSQSPVPHHLPPSSESPI--PHHPPSQSPVPHHLPPS 60
           PP++ P+   + P +++P+  +PP++ PV   + P ++ P+  P +PP+++PV   + P 
Sbjct: 154 PPTKPPVKPPVYPPTKAPV--KPPTKPPVKPPVSPPAKPPVKPPVYPPTKAPVKPPVSPP 213

Query: 61  SESPT--PHHPPSQSPVPHHLPPSSVVYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTKH 120
           ++ P   P +PP  +     +     VYCKSCKY    TLL AKP+ GA V++ CK+ K+
Sbjct: 214 TKPPVTPPVYPPKFN--RSLVAVRGTVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKKN 273

Query: 121 SRVVVTATTDNNGYF-WLASKDVSSHAYHRCKVYNVKSSDKNCTITSKMNGGIEGAELKP 180
             +    TTD NGYF  LA K V++  +  C+VY VKS D  C+  SK+ GG  GAELKP
Sbjct: 274 --ITAETTTDKNGYFLLLAPKTVTNFGFRGCRVYLVKSKDYKCSKVSKLFGGDVGAELKP 333

Query: 181 V----KAFLDVEKKPVVLYRVGPLAYEPTCPR 204
                K+ + V K    L+ VGP A+ P+CP+
Sbjct: 334 EKKLGKSTVVVNKLVYGLFNVGPFAFNPSCPK 359

BLAST of Cp4.1LG09g07220 vs. TAIR 10
Match: AT2G34700.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-24
Identity = 65/149 (43.62%), Postives = 91/149 (61.07%), Query Frame = 0

Query: 61  SPTPHHPPSQSPVP---HHLPPSSVVYCKSCKYPGVETLLDAKPLSGAMVQMTCKNTKHS 120
           S +P  PPS SP       +    +VYCKSCKY GV+TLL+A PL GA V++ C NTK  
Sbjct: 28  SASPMTPPS-SPAKMSRRLVAVEGMVYCKSCKYSGVDTLLEASPLQGATVKLACNNTKRG 87

Query: 121 RVVVTATTDNNGYFW-LASKDVSSHAYHRCKVYNVK----SSDKNCTITSKMNGGIEGAE 180
            V +   TD NGYF+ LA K ++++A+H C+ +       ++   CT+ SK+N GI GA 
Sbjct: 88  -VTMETKTDKNGYFFMLAPKKLTTYAFHTCRAWPTNPGPTTATMTCTVPSKLNNGITGAM 147

Query: 181 LKPVKAFLDVEKKPVVLYRVGPLAYEPTC 202
           LKP K  +++ +   VL+ VGP A+EP C
Sbjct: 148 LKPSKT-INIGEHDYVLFSVGPFAFEPAC 173

BLAST of Cp4.1LG09g07220 vs. TAIR 10
Match: AT2G33790.1 (arabinogalactan protein 30 )

HSP 1 Score: 92.0 bits (227), Expect = 5.7e-19
Identity = 77/215 (35.81%), Postives = 116/215 (53.95%), Query Frame = 0

Query: 1   PPSQSP---IPHHLPPSSESPIPHQPPSQSPVPHHLPPSSESPI--PHHPPSQSPVPHHL 60
           P S  P   +P HL P     +P  PP+++P+     P +++PI  P  PP+++P+    
Sbjct: 30  PGSSDPFHSLPQHL-PLPPIKLPTLPPAKAPIKLPAYPPAKAPIKLPTLPPAKAPIKLPT 89

Query: 61  PPSSESPT--PHHPPSQSPVPHHLPPSSVVYCKSCKYPGVETLLDAKPLSGAMVQMTCKN 120
            P  + P   P +PP  +     +    VVYCK+CKY GV  +  AKP+  A+V++ CKN
Sbjct: 90  LPPIKPPVLPPVYPPKYNKT--LVAVRGVVYCKACKYAGVNNVQGAKPVKDAVVRLVCKN 149

Query: 121 TKHSRVVVTATTDNNGYFW-LASKDVSSHAYHRCKVYNVKSSDKNCTITSKMNGGIEGAE 180
            K+S  +    TD NGYF  LA K V+++    C+ + VKS D  C+  S ++ G +G+ 
Sbjct: 150 KKNS--ISETKTDKNGYFMLLAPKTVTNYDIKGCRAFLVKSPDTKCSKVSSLHDGGKGSV 209

Query: 181 LKPV--KAFLDVEKK--PVVLYRVGPLAYEPTCPR 204
           LKPV    F     +     +Y VGP A+EPTCP+
Sbjct: 210 LKPVLKPGFSSTIMRWFKYSVYNVGPFAFEPTCPK 239

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FZA24.4e-2438.21Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP3... [more]
P930138.1e-1835.81Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP3... [more]
Q032111.4e-1434.00Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
XP_023542178.14.31e-13381.20non-classical arabinogalactan protein 30-like [Cucurbita pepo subsp. pepo][more]
XP_022955047.17.78e-12482.46non-classical arabinogalactan protein 31-like [Cucurbita moschata][more]
XP_022994866.13.11e-11383.90non-classical arabinogalactan protein 31-like [Cucurbita maxima][more]
KAG7012566.11.49e-11278.76Non-classical arabinogalactan protein 31, partial [Cucurbita argyrosperma subsp.... [more]
KAG6573405.12.19e-5994.68Non-classical arabinogalactan protein 31, partial [Cucurbita argyrosperma subsp.... [more]
Match NameE-valueIdentityDescription
A0A6J1GSI43.77e-12482.46non-classical arabinogalactan protein 31-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1K0H21.51e-11383.90non-classical arabinogalactan protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A5A7URZ53.50e-5758.47Non-classical arabinogalactan protein 31 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3B5Q33.50e-5758.47non-classical arabinogalactan protein 31 OS=Cucumis melo OX=3656 GN=LOC103486459... [more]
A0A6J1EHN23.77e-5758.79non-classical arabinogalactan protein 31-like OS=Cucurbita moschata OX=3662 GN=L... [more]
Match NameE-valueIdentityDescription
AT1G28290.21.4e-2538.64arabinogalactan protein 31 [more]
AT1G28290.13.1e-2538.21arabinogalactan protein 31 [more]
AT2G34700.11.6e-2443.62Pollen Ole e 1 allergen and extensin family protein [more]
AT2G33790.15.7e-1935.81arabinogalactan protein 30 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF01190Pollen_Ole_e_1coord: 82..170
e-value: 3.3E-21
score: 75.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..75
NoneNo IPR availablePANTHERPTHR33470OS01G0164075 PROTEINcoord: 11..201
NoneNo IPR availablePANTHERPTHR33470:SF22POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEINcoord: 11..201

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g07220.1Cp4.1LG09g07220.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0071944 cell periphery