Cp4.1LG09g07160 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g07160
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Tubulin beta chain
Location	Cp4.1LG09: 6531247 .. 6534531 (+)
RNA-Seq Expression	Cp4.1LG09g07160
Synteny	Cp4.1LG09g07160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTAAATTTAGTTTCTTTTCTTTTTTTGGAATTCAAAAGGAAAAAGACAAATTTATTTTATTTTTTGCAAAAATGCCCCTTGATTTTAGGTTATTTACTTAACAACCAAGTATAAATAGCCCCCGACATCCCTGTTTATCTCTCCACCCATTCAATTCCATTCGTTCAGTAACGAATCCAAGTCTCTCTCCCAAATTCTCCAATTTTCTCTCTGTTGTTCTTATCGTTTTCCGTTTGTTTCCCGGGAAAAATAATCGAAGATGAGAGAAATCCTTCACATCCAGGGTGGCCAATGCGGTAACCAGATCGGTGCCAAGTTCTGGGAGGTCATTTGCGATGAACATGGCATTGACCATACTGGCAAGTACAGCGGCGACTCTGAGCTTCAGCTTGAGCGGATTAATGTGTATTACAATGAGGCTAGTGGTGGAAGGTATGTTCCTCGTGCCGTTCTTATGGATCTAGAGCCTGGTACTATGGATTCCGTCAGATCCGGACCCTATGGTCAGATCTTCCGTCCCGATAACTTCGTTTTTGGTCAGTCTGGGGCTGGGAATAATTGGGCCAAGGGACATTACACTGAAGGAGCTGAGCTTATTGATTCTGTTCTCGACGTTGTCAGGAAGGAGGCTGAGAATTGTGATTGCTTGCAAGGTAGTAGGATTTCTTTTCTTGTTTTTTGAACTACTGATTTTGGTCTTTGATTTCCCGCGCAATTTTCTCACCTGGTTCCTTTTGTGTTAATTTATTTTGAGGTTTGGAATTGTCCTTTTGGATCTAGCCTCGCAATTCTTGTGTTAAATTCTTAATTTCGTTTTGGTTGAAATTCTACCGTTCGTCTTCGAATCATACTGATTAGCTTCTTTTATCCTTTGGTGTTTGGGATTTTGTTCTGAAGGATCTTTTCTCTTGCTTCTCGAATTTGGAGAAATGGTTCAATGTTCTGCAAATCTTTTCTTTAGTATTCTGCGTGCGTTCAGTCCAGCTTCTGGTATCACGTTTATATAATTATACCGACGGATTTAAATATACGGATCCTTATGAAACCATAATATTAACTTTGTTTTCGATGCAATCTTCTCTGGATCTGATCGTAAAAAACATTATATTCAGAGGATTTTTCCTATTTCCATCCCCTCCGTAAGTAATTCTACAAAATTGTTTTATCAACTTTCTTGCCAATTAGAACAACAAAAAATTGTTTTGTCAACTTTGATGTTGTGCGTAGTTTTGTATCTTTCAAATTTTTATTTGCATCTCTCTGACTCTCTCTGACTCTCTCTGTCTCTGCGACATGAACGCACATAGAGTTCTTTGACATTGGCTGACTATCTTTTTCCTTCTTATTTGTAAAGGATTCCAAGTTTGTCATTCTTTGGGTGGAGGTACTGGCTCTGGAATGGGAACACTTCTGATTTCAAAGATCAGGGAGGAGTACCCAGATCGTATGATGTTGACATTTTCAGTATTTCCTTCTCCCAAGGTTTCAGACACAGTTGTAGAGCCTTACAATGCCACTTTGTCTGTTCATCAGCTTGTCGAGAATGCTGATGAATGCATGGTTCTTGACAATGAAGCCCTTTACGATATTTGCTTCAGAACACTCAAGCTTGCTACTCCAACATGTAAGTGCCTAACTCCTGAAACTGGAACTTATATTTGAGTCTTGAAATGTGCGTTTGGTTGCTCATTGTTATATCAAAAGCTGTAAATGGATGGTGTTGAGTCTGAAGTTCTGATATGTCTCTTTAGATACTTATAGTACTTCATTACTTTTTCCATGGCTGTACCGTGCAATTGCATAAAAATGATTGTTTTCAAGTCCCAAATTCCGATCATTATTTGCTGGTGGCAGTTGTAAAAAGGGTCCCAGTTGTAGGTTCTTTCCTTTGTTTTACTTTTTCCTTTCACCTTTTTGGCCAAACTTAAATACTAATTATGAGATCCTGCATCGGTTAGGGAGAATAACGAAACATTCTTTGTAGAAGTGTAGAAACCTCTCCCTAGCATATGCATTTTAAAAACCTCAAGCGAAAGTCGGAAAGGAAAACCCCAAAGAGGACAATATCTGCTAGCGGTAGGCTTAGGCCTTTACAAATAGTATCAGAGCCAGACACGGGGCGATGTGCCAACAAGGAGGCTGAGCTCTGGAGGGGGTGAACACGAGGTAGTGTGCCAGCAAAGACGCTAGGCCTCGAAGGGAGGTAGATTAGGAGGTCCCACATCGATTGGAGAAGGTAACGAATGCTATCGAAGACATTGGGCCCTAAAGGGGGTGAATTGCGAAATCCCACATCGGTTGAGGAGGAGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCCTAGTATACACGTTTTAAAAACCTCGAGGGGAAATCCGAAAGGGAAAGCCCAAATAAGACAACATTTGCTAGGGGTGGACTTAGGTAGGAAAAGGGAAAAATTCTTGTGAACCATGTTATGCACAAATGTAACCACAGATTCACATGAACGAAAATGCCAAAAAGTGCGTAACCTTTTAGTAGTTTTATTCATTGTTTACATTTATATGGAAAATATCAACTTATTGGTCAGATTTTTTTCTTACTTGTTGAATTGTCATATTGCAGTTGGTGATCTCAACCACCTTATCTCTGCTACCATGAGTGGTGTTACTTGTTGTTTACGATTCCCTGGACAATTGAACTCTGATCTACGAAAACTTGCTGTCAATCTCATTCCATTCCCTCGTTTACATTTCTTTATGGTTGGTTTTGCACCATTAACATCAAGAGGATCCCAGCAATACCGAGCCCTTACCGTGCCAGAGTTAACCCAGCAGATGTGGGATGCCAAGAACATGATGTGCGCTGCTGATCCACGACATGGTCGATACCTTACCGCTTCAGCCATGTTCCGTGGCAAGATGAGTACTAAAGAAGTAGACGAGCAAATGATTAACGTACAAAACAAGAATTCATCTTACTTTGTTGAGTGGATACCCAACAACGTCAAGTCCAGTGTGTGCGACATTCCCCCCAAGGGACTAAAGATGGCATCGACTTTCATCGGTAACTCGACTTCAATTCAGGAGATGTTCAGGAGGGTTAGTGAGCAGTTCACAGCCATGTTCAGGCGCAAGGCCTTCTTGCATTGGTACACCGGCGAAGGAATGGACGAAATGGAGTTCACCGAGGCCGAGAGTAACATGAACGATCTGGTGGCCGAGTATCAGCAGTACCAGGATGCAACTGCAGAGGAAGAATACGAGGATGAAGAAGAGGAAATCCCTGCTTGA

mRNA sequence

ATGGGTTATTTACTTAACAACCAAATGAGAGAAATCCTTCACATCCAGGGTGGCCAATGCGGTAACCAGATCGGTGCCAAGTTCTGGGAGGTCATTTGCGATGAACATGGCATTGACCATACTGGCAAGTACAGCGGCGACTCTGAGCTTCAGCTTGAGCGGATTAATGTGTATTACAATGAGGCTAGTGGTGGAAGGTATGTTCCTCGTGCCGTTCTTATGGATCTAGAGCCTGGTACTATGGATTCCGTCAGATCCGGACCCTATGGTCAGATCTTCCGTCCCGATAACTTCGTTTTTGGTCAGTCTGGGGCTGGGAATAATTGGGCCAAGGGACATTACACTGAAGGAGCTGAGCTTATTGATTCTGTTCTCGACGTTGTCAGGAAGGAGGCTGAGAATTGTGATTGCTTGCAAGGATTCCAAGTTTGTCATTCTTTGGGTGGAGGTACTGGCTCTGGAATGGGAACACTTCTGATTTCAAAGATCAGGGAGGAGTACCCAGATCGTATGATGTTGACATTTTCAGTATTTCCTTCTCCCAAGGTTTCAGACACAGTTGTAGAGCCTTACAATGCCACTTTGTCTGTTCATCAGCTTGTCGAGAATGCTGATGAATGCATGCCCTTTACGATATTTGCTTCAGAACACTCAAGCTTGCTACTCCAACATGAGATGTTCAGGAGGGTTAGTGAGCAGTTCACAGCCATGTTCAGGCGCAAGGCCTTCTTGCATTGGTACACCGGCGAAGGAATGGACGAAATGGAGTTCACCGAGGCCGAGAGTAACATGAACGATCTGGTGGCCGAGTATCAGCAGTACCAGGATGCAACTGCAGAGGAAGAATACGAGGATGAAGAAGAGGAAATCCCTGCTTGA

Coding sequence (CDS)

ATGGGTTATTTACTTAACAACCAAATGAGAGAAATCCTTCACATCCAGGGTGGCCAATGCGGTAACCAGATCGGTGCCAAGTTCTGGGAGGTCATTTGCGATGAACATGGCATTGACCATACTGGCAAGTACAGCGGCGACTCTGAGCTTCAGCTTGAGCGGATTAATGTGTATTACAATGAGGCTAGTGGTGGAAGGTATGTTCCTCGTGCCGTTCTTATGGATCTAGAGCCTGGTACTATGGATTCCGTCAGATCCGGACCCTATGGTCAGATCTTCCGTCCCGATAACTTCGTTTTTGGTCAGTCTGGGGCTGGGAATAATTGGGCCAAGGGACATTACACTGAAGGAGCTGAGCTTATTGATTCTGTTCTCGACGTTGTCAGGAAGGAGGCTGAGAATTGTGATTGCTTGCAAGGATTCCAAGTTTGTCATTCTTTGGGTGGAGGTACTGGCTCTGGAATGGGAACACTTCTGATTTCAAAGATCAGGGAGGAGTACCCAGATCGTATGATGTTGACATTTTCAGTATTTCCTTCTCCCAAGGTTTCAGACACAGTTGTAGAGCCTTACAATGCCACTTTGTCTGTTCATCAGCTTGTCGAGAATGCTGATGAATGCATGCCCTTTACGATATTTGCTTCAGAACACTCAAGCTTGCTACTCCAACATGAGATGTTCAGGAGGGTTAGTGAGCAGTTCACAGCCATGTTCAGGCGCAAGGCCTTCTTGCATTGGTACACCGGCGAAGGAATGGACGAAATGGAGTTCACCGAGGCCGAGAGTAACATGAACGATCTGGTGGCCGAGTATCAGCAGTACCAGGATGCAACTGCAGAGGAAGAATACGAGGATGAAGAAGAGGAAATCCCTGCTTGA

Protein sequence

MGYLLNNQMREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMPFTIFASEHSSLLLQHEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEEYEDEEEEIPA

Homology

[Close]

BLAST of Cp4.1LG09g07160 vs. ExPASy Swiss-Prot
Match: Q9ZPP0 (Tubulin beta-1 chain OS=Eleusine indica OX=29674 GN=TUBB1 PE=2 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 4.1e-132
Identity = 267/445 (60.00%), Postives = 276/445 (62.02%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 68
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDS+LQLERINVYYNEASGGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRFV 60

Query: 69  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 128
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 129 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 188
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 189 EPYNATLSVHQLVENADECM---------------------------------------- 248
           EPYNATLSVHQLVENADECM                                        
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240

Query: 249 -------------------------------PFTIFASE--------------------- 293
                                          P T   S+                     
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300

[Close]

BLAST of Cp4.1LG09g07160 vs. ExPASy Swiss-Prot
Match: Q40665 (Tubulin beta-3 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB3 PE=2 SV=2)

HSP 1 Score: 472.2 bits (1214), Expect = 4.1e-132
Identity = 267/441 (60.54%), Postives = 274/441 (62.13%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 68
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDS+LQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60

Query: 69  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 128
           PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 129 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 188
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 189 EPYNATLSVHQLVENADECM---------------------------------------- 248
           EPYNATLSVHQLVENADECM                                        
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240

Query: 249 -------------------------------PFTIFASE--------------------- 290
                                          P T   S+                     
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

[Close]

BLAST of Cp4.1LG09g07160 vs. ExPASy Swiss-Prot
Match: P37832 (Tubulin beta-7 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB7 PE=2 SV=2)

HSP 1 Score: 471.5 bits (1212), Expect = 7.0e-132
Identity = 264/443 (59.59%), Postives = 274/443 (61.85%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 68
           MREILHIQGGQCGNQIGAKFWEVICDEHG+D TG+Y+GDS+LQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60

Query: 69  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 128
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 129 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 188
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 189 EPYNATLSVHQLVENADECM---------------------------------------- 248
           EPYNATLSVHQLVENADECM                                        
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240

Query: 249 -------------------------------PFTIFASE--------------------- 293
                                          P T   S+                     
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

[Close]

BLAST of Cp4.1LG09g07160 vs. ExPASy Swiss-Prot
Match: Q41784 (Tubulin beta-7 chain OS=Zea mays OX=4577 GN=TUBB7 PE=2 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 3.5e-131
Identity = 265/441 (60.09%), Postives = 274/441 (62.13%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 68
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDS+LQLERINVYYNEASGGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRFV 60

Query: 69  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 128
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 129 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 188
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 189 EPYNATLSVHQLVENADECM---------------------------------------- 248
           EPYNATLSVHQLVENADECM                                        
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240

Query: 249 -------------------------------PFTIFASE--------------------- 290
                                          P T   S+                     
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300

[Close]

BLAST of Cp4.1LG09g07160 vs. ExPASy Swiss-Prot
Match: Q9ZPN8 (Tubulin beta-3 chain OS=Eleusine indica OX=29674 GN=TUBB3 PE=2 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 7.8e-131
Identity = 265/446 (59.42%), Postives = 274/446 (61.43%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 68
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDS+LQLERINVYYNEA GGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEAGGGRFV 60

Query: 69  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 128
           PRAVLMDLEPGTMDS+RSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 129 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 188
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 189 EPYNATLSVHQLVENADECM---------------------------------------- 248
           EPYNATLSVHQLVENADECM                                        
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240

Query: 249 -------------------------------PFTIFASE--------------------- 293
                                          P T   S+                     
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMM 300

[Close]

BLAST of Cp4.1LG09g07160 vs. NCBI nr
Match: OAY63432.1 (Tubulin beta-1 chain [Ananas comosus])

HSP 1 Score: 535 bits (1377), Expect = 6.60e-191
Identity = 264/284 (92.96%), Postives = 271/284 (95.42%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 68
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDH+GKYSGDSELQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYSGDSELQLERINVYYNEASGGRYV 60

Query: 69  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 128
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 129 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 188
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 189 EPYNATLSVHQLVENADECMPFTIFASEHSSLLLQHEMFRRVSEQFTAMFRRKAFLHWYT 248
           EPYNATLSVHQLVENADECM  + F    +S+    EMFRRVSEQFTAMFRRKAFLHWYT
Sbjct: 181 EPYNATLSVHQLVENADECMMASTFVGNSTSI---QEMFRRVSEQFTAMFRRKAFLHWYT 240

Query: 249 GEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEEYEDEEEEIPA 292
           GEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEEYE+EEEE  A
Sbjct: 241 GEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEEYEEEEEEEEA 281

[Close]

BLAST of Cp4.1LG09g07160 vs. NCBI nr
Match: CAB3493007.1 (unnamed protein product [Digitaria exilis] >CAB3497986.1 unnamed protein product [Digitaria exilis])

HSP 1 Score: 530 bits (1364), Expect = 6.56e-189
Identity = 261/283 (92.23%), Postives = 269/283 (95.05%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 68
           MREILHIQGGQCGNQIGAKFWEVICDEHGID TG+Y+GDS+LQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDATGRYAGDSDLQLERINVYYNEASGGRYV 60

Query: 69  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 128
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 129 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 188
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 189 EPYNATLSVHQLVENADECMPFTIFASEHSSLLLQHEMFRRVSEQFTAMFRRKAFLHWYT 248
           EPYNATLSVHQLVENADECM    F    +S+    EMFRRVSEQFTAMFRRKAFLHWYT
Sbjct: 181 EPYNATLSVHQLVENADECMMAGTFVGNSTSI---QEMFRRVSEQFTAMFRRKAFLHWYT 240

Query: 249 GEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEEYEDEEEEIP 291
           GEGMDEMEFTEAESNMNDLVAEYQQYQDATA+E+YEDEEEE P
Sbjct: 241 GEGMDEMEFTEAESNMNDLVAEYQQYQDATADEDYEDEEEEEP 280

[Close]

BLAST of Cp4.1LG09g07160 vs. NCBI nr
Match: CAB3471141.1 (unnamed protein product [Digitaria exilis])

HSP 1 Score: 528 bits (1359), Expect = 2.64e-187
Identity = 261/281 (92.88%), Postives = 268/281 (95.37%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 68
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDS+LQLERINVYYNEASGGR+V
Sbjct: 54  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRFV 113

Query: 69  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 128
           PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 114 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 173

Query: 129 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 188
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 174 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 233

Query: 189 EPYNATLSVHQLVENADECMPFTIFASEHSSLLLQHEMFRRVSEQFTAMFRRKAFLHWYT 248
           EPYNATLSVHQLVENADECM  + F    +S+    EMFRRVSEQFTAMFRRKAFLHWYT
Sbjct: 234 EPYNATLSVHQLVENADECMMASTFIGNSTSI---QEMFRRVSEQFTAMFRRKAFLHWYT 293

Query: 249 GEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEEYEDEEEE 289
           GEGMDEMEFTEAESNMNDLVAEYQQYQDATAE+E E EEEE
Sbjct: 294 GEGMDEMEFTEAESNMNDLVAEYQQYQDATAEDEEEYEEEE 331

[Close]

BLAST of Cp4.1LG09g07160 vs. NCBI nr
Match: OAY71483.1 (Tubulin beta-1 chain, partial [Ananas comosus])

HSP 1 Score: 528 bits (1359), Expect = 7.30e-187
Identity = 263/283 (92.93%), Postives = 270/283 (95.41%), Query Frame = 0


Query: 8   QMREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRY 67
           +MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEAS GRY
Sbjct: 81  KMREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASCGRY 140

Query: 68  VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 127
           VPRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDV
Sbjct: 141 VPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 200

Query: 128 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 187
           VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV
Sbjct: 201 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 260

Query: 188 VEPYNATLSVHQLVENADECMPFTIFASEHSSLLLQHEMFRRVSEQFTAMFRRKAFLHWY 247
           VEPYNATLSVHQLVENADECM  + F    +S+    EMFRRVSEQFTAMFRRKAFLHWY
Sbjct: 261 VEPYNATLSVHQLVENADECMMASTFIGNSTSI---QEMFRRVSEQFTAMFRRKAFLHWY 320

Query: 248 TGEGMDEMEFTEAESNMNDLVAEYQQYQDATA-EEEYEDEEEE 289
           TGEGMDEMEFTEAESNMNDLVAEYQQYQDATA EEEYE+EEEE
Sbjct: 321 TGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEEYEEEEEE 360

[Close]

BLAST of Cp4.1LG09g07160 vs. NCBI nr
Match: AQK62555.1 (Tubulin beta-4 chain [Zea mays] >PWZ20158.1 Tubulin beta-7 chain [Zea mays])

HSP 1 Score: 520 bits (1339), Expect = 6.12e-185
Identity = 259/291 (89.00%), Postives = 268/291 (92.10%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 68
           MREILHIQGGQCGNQIGAKFWEVICDEHGID TG+Y+GDS+LQLER+NVYYNEASGGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDATGRYAGDSDLQLERVNVYYNEASGGRFV 60

Query: 69  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 128
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 129 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 188
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 189 EPYNATLSVHQLVENADECMPFT----------IFASEHSSLLLQHEMFRRVSEQFTAMF 248
           EPYNATLSVHQLVENADECM              F    +S+    EMFRRVSEQFTAMF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALGLKMAGTFVGNSTSI---QEMFRRVSEQFTAMF 240

Query: 249 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEEYEDEEEE 289
           RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA+EEYEDEEEE
Sbjct: 241 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEYEDEEEE 288

[Close]

BLAST of Cp4.1LG09g07160 vs. ExPASy TrEMBL
Match: A0A199UEY4 (Tubulin beta chain OS=Ananas comosus OX=4615 GN=ACMD2_13625 PE=3 SV=1)

HSP 1 Score: 535 bits (1377), Expect = 3.20e-191
Identity = 264/284 (92.96%), Postives = 271/284 (95.42%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 68
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDH+GKYSGDSELQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYSGDSELQLERINVYYNEASGGRYV 60

Query: 69  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 128
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 129 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 188
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 189 EPYNATLSVHQLVENADECMPFTIFASEHSSLLLQHEMFRRVSEQFTAMFRRKAFLHWYT 248
           EPYNATLSVHQLVENADECM  + F    +S+    EMFRRVSEQFTAMFRRKAFLHWYT
Sbjct: 181 EPYNATLSVHQLVENADECMMASTFVGNSTSI---QEMFRRVSEQFTAMFRRKAFLHWYT 240

Query: 249 GEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEEYEDEEEEIPA 292
           GEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEEYE+EEEE  A
Sbjct: 241 GEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEEYEEEEEEEEA 281

[Close]

BLAST of Cp4.1LG09g07160 vs. ExPASy TrEMBL
Match: A0A199V3C4 (Tubulin beta chain (Fragment) OS=Ananas comosus OX=4615 GN=ACMD2_02752 PE=3 SV=1)

HSP 1 Score: 528 bits (1359), Expect = 3.53e-187
Identity = 263/283 (92.93%), Postives = 270/283 (95.41%), Query Frame = 0


Query: 8   QMREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRY 67
           +MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEAS GRY
Sbjct: 81  KMREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASCGRY 140

Query: 68  VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 127
           VPRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDV
Sbjct: 141 VPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 200

Query: 128 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 187
           VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV
Sbjct: 201 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 260

Query: 188 VEPYNATLSVHQLVENADECMPFTIFASEHSSLLLQHEMFRRVSEQFTAMFRRKAFLHWY 247
           VEPYNATLSVHQLVENADECM  + F    +S+    EMFRRVSEQFTAMFRRKAFLHWY
Sbjct: 261 VEPYNATLSVHQLVENADECMMASTFIGNSTSI---QEMFRRVSEQFTAMFRRKAFLHWY 320

Query: 248 TGEGMDEMEFTEAESNMNDLVAEYQQYQDATA-EEEYEDEEEE 289
           TGEGMDEMEFTEAESNMNDLVAEYQQYQDATA EEEYE+EEEE
Sbjct: 321 TGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEEYEEEEEE 360

[Close]

BLAST of Cp4.1LG09g07160 vs. ExPASy TrEMBL
Match: A0A1D6GG78 (Tubulin beta chain OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d013139 PE=3 SV=1)

HSP 1 Score: 520 bits (1339), Expect = 2.96e-185
Identity = 259/291 (89.00%), Postives = 268/291 (92.10%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 68
           MREILHIQGGQCGNQIGAKFWEVICDEHGID TG+Y+GDS+LQLER+NVYYNEASGGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDATGRYAGDSDLQLERVNVYYNEASGGRFV 60

Query: 69  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 128
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 129 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 188
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 189 EPYNATLSVHQLVENADECMPFT----------IFASEHSSLLLQHEMFRRVSEQFTAMF 248
           EPYNATLSVHQLVENADECM              F    +S+    EMFRRVSEQFTAMF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALGLKMAGTFVGNSTSI---QEMFRRVSEQFTAMF 240

Query: 249 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEEYEDEEEE 289
           RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA+EEYEDEEEE
Sbjct: 241 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEYEDEEEE 288

[Close]

BLAST of Cp4.1LG09g07160 vs. ExPASy TrEMBL
Match: A0A3L6EHQ9 (Tubulin beta chain OS=Zea mays OX=4577 GN=TUBB7_2 PE=3 SV=1)

HSP 1 Score: 520 bits (1339), Expect = 2.96e-185
Identity = 259/291 (89.00%), Postives = 268/291 (92.10%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 68
           MREILHIQGGQCGNQIGAKFWEVICDEHGID TG+Y+GDS+LQLER+NVYYNEASGGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDATGRYAGDSDLQLERVNVYYNEASGGRFV 60

Query: 69  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 128
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 129 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 188
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 189 EPYNATLSVHQLVENADECMPFT----------IFASEHSSLLLQHEMFRRVSEQFTAMF 248
           EPYNATLSVHQLVENADECM              F    +S+    EMFRRVSEQFTAMF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALGLKMAGTFVGNSTSI---QEMFRRVSEQFTAMF 240

Query: 249 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEEYEDEEEE 289
           RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA+EEYEDEEEE
Sbjct: 241 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEYEDEEEE 288

[Close]

BLAST of Cp4.1LG09g07160 vs. ExPASy TrEMBL
Match: A0A444F816 (Tubulin beta chain OS=Ensete ventricosum OX=4639 GN=GW17_00017274 PE=3 SV=1)

HSP 1 Score: 518 bits (1334), Expect = 1.14e-184
Identity = 260/282 (92.20%), Postives = 266/282 (94.33%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 68
           MREILHIQGGQCGNQIGAKFWEVICDEHGID TGKY+GDS+LQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDGTGKYTGDSDLQLERINVYYNEASGGRYV 60

Query: 69  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 128
           PRAVLMDLEPGTMDSVRSG  GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGRIGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 129 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 188
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 189 EPYNATLSVHQLVENADECMPFTIFASEHSSLLLQHEMFRRVSEQFTAMFRRKAFLHWYT 248
           EPYNATLSVHQLVENADECM  + F    +S+    EMFRRVSEQFTAMFRRKAFLHWYT
Sbjct: 181 EPYNATLSVHQLVENADECMMASTFIGNSTSI---QEMFRRVSEQFTAMFRRKAFLHWYT 240

Query: 249 GEGMDEMEFTEAESNMNDLVAEYQQYQDATA-EEEYEDEEEE 289
           GEGMDEMEFTEAESNMNDLVAEYQQYQDATA EEEYE+ EEE
Sbjct: 241 GEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEEYEEGEEE 279

[Close]

BLAST of Cp4.1LG09g07160 vs. TAIR 10
Match: AT5G44340.1 (tubulin beta chain 4 )

HSP 1 Score: 457.2 bits (1175), Expect = 9.8e-129
Identity = 260/441 (58.96%), Postives = 271/441 (61.45%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 68
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTG+Y GDS LQLERI+VY+NEASGG+YV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60

Query: 69  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 128
           PRAVLMDLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 129 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 188
           RKEAEN DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM+TFSVFPSPKVSDTVV
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180

Query: 189 EPYNATLSVHQLVENADECM---------------------------------------- 248
           EPYNATLSVHQLVENADECM                                        
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCL 240

Query: 249 -------------------------------PFTIFASEHSSLL---------------- 290
                                          P T   S+  S L                
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMM 300

[Close]

BLAST of Cp4.1LG09g07160 vs. TAIR 10
Match: AT1G75780.1 (tubulin beta-1 chain )

HSP 1 Score: 455.7 bits (1171), Expect = 2.8e-128
Identity = 256/444 (57.66%), Postives = 274/444 (61.71%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDS-ELQLERINVYYNEASGGRY 68
           MREILH+QGGQCGNQIG+KFWEVICDEHG+D TG+Y+GDS +LQLERINVYYNEASGGRY
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60

Query: 69  VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 128
           VPRAVLMDLEPGTMDS+RSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDV
Sbjct: 61  VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120

Query: 129 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 188
           VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180

Query: 189 VEPYNATLSVHQLVENADECM--------------------------------------- 248
           VEPYNATLSVHQLVENADECM                                       
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCS 240

Query: 249 --------------------------------PFTIFASE-------------------- 291
                                           P T   S+                    
Sbjct: 241 LRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNM 300

[Close]

BLAST of Cp4.1LG09g07160 vs. TAIR 10
Match: AT1G20010.1 (tubulin beta-5 chain )

HSP 1 Score: 454.5 bits (1168), Expect = 6.3e-128
Identity = 261/443 (58.92%), Postives = 274/443 (61.85%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGD-SELQLERINVYYNEASGGRY 68
           MREILHIQGGQCGNQIG+KFWEVICDEHGID TG+YSGD ++LQLERINVYYNEASGGRY
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60

Query: 69  VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 128
           VPRAVLMDLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDV
Sbjct: 61  VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120

Query: 129 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 188
           VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180

Query: 189 VEPYNATLSVHQLVENADECM--------------------------------------- 248
           VEPYNATLSVHQLVENADECM                                       
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCS 240

Query: 249 -------------------PF--------------------------------------- 290
                              PF                                       
Sbjct: 241 LRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNM 300

[Close]

BLAST of Cp4.1LG09g07160 vs. TAIR 10
Match: AT5G62690.1 (tubulin beta chain 2 )

HSP 1 Score: 453.4 bits (1165), Expect = 1.4e-127
Identity = 257/441 (58.28%), Postives = 269/441 (61.00%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 68
           MREILHIQGGQCGNQIGAKFWEV+C EHGID TG+Y+GDS+LQLERINVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 69  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 128
           PRAVLMDLEPGTMDS+RSGPYGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 129 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 188
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 189 EPYNATLSVHQLVENADECM---------------------------------------- 248
           EPYNATLSVHQLVENADECM                                        
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 249 -------------------------------PFTIFASE--------------------- 289
                                          P T   S+                     
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

[Close]

BLAST of Cp4.1LG09g07160 vs. TAIR 10
Match: AT5G62700.1 (tubulin beta chain 3 )

HSP 1 Score: 453.4 bits (1165), Expect = 1.4e-127
Identity = 257/441 (58.28%), Postives = 269/441 (61.00%), Query Frame = 0


Query: 9   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 68
           MREILHIQGGQCGNQIGAKFWEV+C EHGID TG+Y+GDS+LQLERINVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 69  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 128
           PRAVLMDLEPGTMDS+RSGPYGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 129 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 188
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 189 EPYNATLSVHQLVENADECM---------------------------------------- 248
           EPYNATLSVHQLVENADECM                                        
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 249 -------------------------------PFTIFASE--------------------- 289
                                          P T   S+                     
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g07160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPP0	4.1e-132	60.00	Tubulin beta-1 chain OS=Eleusine indica OX=29674 GN=TUBB1 PE=2 SV=1	[more]
Q40665	4.1e-132	60.54	Tubulin beta-3 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB3 PE=2 SV=2	[more]
P37832	7.0e-132	59.59	Tubulin beta-7 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB7 PE=2 SV=2	[more]
Q41784	3.5e-131	60.09	Tubulin beta-7 chain OS=Zea mays OX=4577 GN=TUBB7 PE=2 SV=1	[more]
Q9ZPN8	7.8e-131	59.42	Tubulin beta-3 chain OS=Eleusine indica OX=29674 GN=TUBB3 PE=2 SV=1	[more]

BLAST of Cp4.1LG09g07160 vs. NCBI nr


Match Name	E-value	Identity	Description
OAY63432.1	6.60e-191	92.96	Tubulin beta-1 chain [Ananas comosus]	[more]
CAB3493007.1	6.56e-189	92.23	unnamed protein product [Digitaria exilis] >CAB3497986.1 unnamed protein product...	[more]
CAB3471141.1	2.64e-187	92.88	unnamed protein product [Digitaria exilis]	[more]
OAY71483.1	7.30e-187	92.93	Tubulin beta-1 chain, partial [Ananas comosus]	[more]
AQK62555.1	6.12e-185	89.00	Tubulin beta-4 chain [Zea mays] >PWZ20158.1 Tubulin beta-7 chain [Zea mays]	[more]

BLAST of Cp4.1LG09g07160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A199UEY4	3.20e-191	92.96	Tubulin beta chain OS=Ananas comosus OX=4615 GN=ACMD2_13625 PE=3 SV=1	[more]
A0A199V3C4	3.53e-187	92.93	Tubulin beta chain (Fragment) OS=Ananas comosus OX=4615 GN=ACMD2_02752 PE=3 SV=1	[more]
A0A1D6GG78	2.96e-185	89.00	Tubulin beta chain OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d013139 PE=3 SV=1	[more]
A0A3L6EHQ9	2.96e-185	89.00	Tubulin beta chain OS=Zea mays OX=4577 GN=TUBB7_2 PE=3 SV=1	[more]
A0A444F816	1.14e-184	92.20	Tubulin beta chain OS=Ensete ventricosum OX=4639 GN=GW17_00017274 PE=3 SV=1	[more]

BLAST of Cp4.1LG09g07160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G44340.1	9.8e-129	58.96	tubulin beta chain 4	[more]
AT1G75780.1	2.8e-128	57.66	tubulin beta-1 chain	[more]
AT1G20010.1	6.3e-128	58.92	tubulin beta-5 chain	[more]
AT5G62690.1	1.4e-127	58.28	tubulin beta chain 2	[more]
AT5G62700.1	1.4e-127	58.28	tubulin beta chain 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 257..277
None	No IPR available	PANTHER	PTHR11588:SF387	TUBULIN BETA CHAIN	coord: 9..209 coord: 224..286
None	No IPR available	CDD	cd02187	beta_tubulin	coord: 10..275 e-value: 2.67537E-161 score: 453.562
IPR000217	Tubulin	PRINTS	PR01161	TUBULIN	coord: 159..180 score: 59.63 coord: 101..112 score: 76.26 coord: 140..158 score: 79.04 coord: 114..138 score: 70.19 coord: 198..218 score: 34.97 coord: 184..197 score: 79.11 coord: 59..78 score: 68.16 coord: 18..38 score: 74.61
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 224..286
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 9..209
IPR002453	Beta tubulin	PRINTS	PR01163	BETATUBULIN	coord: 116..134 score: 87.58 coord: 160..172 score: 91.43 coord: 49..66 score: 78.29 coord: 96..107 score: 94.76
IPR003008	Tubulin/FtsZ, GTPase domain	SMART	SM00864	Tubulin_4	coord: 55..242 e-value: 3.3E-41 score: 152.9
IPR003008	Tubulin/FtsZ, GTPase domain	PFAM	PF00091	Tubulin	coord: 11..210 e-value: 4.5E-65 score: 219.6
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	GENE3D	3.40.50.1440	Tubulin/FtsZ, GTPase domain	coord: 9..272 e-value: 1.4E-102 score: 344.7
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	SUPERFAMILY	52490	Tubulin nucleotide-binding domain-like	coord: 9..211
IPR017975	Tubulin, conserved site	PROSITE	PS00227	TUBULIN	coord: 148..154
IPR008280	Tubulin/FtsZ, C-terminal	SUPERFAMILY	55307	Tubulin C-terminal domain-like	coord: 224..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g07160.1	Cp4.1LG09g07160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005874	microtubule
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005200	structural constituent of cytoskeleton