Cp4.1LG09g06630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g06630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	agamous-like MADS-box protein AGL80
Location	Cp4.1LG09: 5459370 .. 5460029 (-)
RNA-Seq Expression	Cp4.1LG09g06630
Synteny	Cp4.1LG09g06630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGAGAAAGAAGGTGAAACTGACATTCATCACAAACGACGCAGCCAGAAAAGCCACTTTCAAGAAGAGGAAAAAGGGTTTCTTAAAGAAGCTCACTGAGCTGACCACCCTCTGTGGGATCGACGCCTGCGCCATTATCTTCAGCCCCTTCAATTCCTACCCTGATCTATGGCCATCCCTTGTGGGCGTCCACAGTGTTATCTCTCACTTCAAGGCCCTGCCCGAGATGGATCAGTGCAAGAAGATGGTGAACCAAGACACCTTCCTCCGCCACCGCATTGCCAAGGCTGCCGACCAGCTCAAGAAGTTGCAGAGGGACAATCGCGAGAAGGAGATCGCCCATCTCATGTTTCAGAGCCTTCTCGCCGGTGGGGCTCCACGCCCTACTTTGAATGTCATTGATTTGAATGATCTTGGGTGGCTGGTTGATCAGAAGATGGCGGATATTTCCAAAAGGATTGAGCTTCTTAGCTCCGCGGTGGCTGTGGAACACAACCAACCGCCGTGTGTGGCGACGGTGGAGCCGTCGTGGTTTATAGAGATGGTGAATCAAGAATATGATGATCAAATGAGATTCGATATTGGGGATGATGTCATTCAGCTTCCTACTTTTGGGGAGGATGGTTGGCCAAATAATGCATTTTTCCCTTCAAACTAA

mRNA sequence

ATGACGAGAAAGAAGGTGAAACTGACATTCATCACAAACGACGCAGCCAGAAAAGCCACTTTCAAGAAGAGGAAAAAGGGTTTCTTAAAGAAGCTCACTGAGCTGACCACCCTCTGTGGGATCGACGCCTGCGCCATTATCTTCAGCCCCTTCAATTCCTACCCTGATCTATGGCCATCCCTTGTGGGCGTCCACAGTGTTATCTCTCACTTCAAGGCCCTGCCCGAGATGGATCAGTGCAAGAAGATGGTGAACCAAGACACCTTCCTCCGCCACCGCATTGCCAAGGCTGCCGACCAGCTCAAGAAGTTGCAGAGGGACAATCGCGAGAAGGAGATCGCCCATCTCATGTTTCAGAGCCTTCTCGCCGGTGGGGCTCCACGCCCTACTTTGAATGTCATTGATTTGAATGATCTTGGGTGGCTGGTTGATCAGAAGATGGCGGATATTTCCAAAAGGATTGAGCTTCTTAGCTCCGCGGTGGCTGTGGAACACAACCAACCGCCGTGTGTGGCGACGGTGGAGCCGTCGTGGTTTATAGAGATGGTGAATCAAGAATATGATGATCAAATGAGATTCGATATTGGGGATGATGTCATTCAGCTTCCTACTTTTGGGGAGGATGGTTGGCCAAATAATGCATTTTTCCCTTCAAACTAA

Coding sequence (CDS)

ATGACGAGAAAGAAGGTGAAACTGACATTCATCACAAACGACGCAGCCAGAAAAGCCACTTTCAAGAAGAGGAAAAAGGGTTTCTTAAAGAAGCTCACTGAGCTGACCACCCTCTGTGGGATCGACGCCTGCGCCATTATCTTCAGCCCCTTCAATTCCTACCCTGATCTATGGCCATCCCTTGTGGGCGTCCACAGTGTTATCTCTCACTTCAAGGCCCTGCCCGAGATGGATCAGTGCAAGAAGATGGTGAACCAAGACACCTTCCTCCGCCACCGCATTGCCAAGGCTGCCGACCAGCTCAAGAAGTTGCAGAGGGACAATCGCGAGAAGGAGATCGCCCATCTCATGTTTCAGAGCCTTCTCGCCGGTGGGGCTCCACGCCCTACTTTGAATGTCATTGATTTGAATGATCTTGGGTGGCTGGTTGATCAGAAGATGGCGGATATTTCCAAAAGGATTGAGCTTCTTAGCTCCGCGGTGGCTGTGGAACACAACCAACCGCCGTGTGTGGCGACGGTGGAGCCGTCGTGGTTTATAGAGATGGTGAATCAAGAATATGATGATCAAATGAGATTCGATATTGGGGATGATGTCATTCAGCTTCCTACTTTTGGGGAGGATGGTTGGCCAAATAATGCATTTTTCCCTTCAAACTAA

Protein sequence

MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPSLVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQSLLAGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEPSWFIEMVNQEYDDQMRFDIGDDVIQLPTFGEDGWPNNAFFPSN

Homology

[Close]

BLAST of Cp4.1LG09g06630 vs. ExPASy Swiss-Prot
Match: Q9FJK3 (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 8.1e-48
Identity = 99/191 (51.83%), Postives = 141/191 (73.82%), Query Frame = 0


Query: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60
           MTRKKVKL +I+ND++RKATFKKRKKG +KK+ EL+TLCGI ACAII+SP+++ P++WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  LVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQS 120
             GV  V+S F+ LPEMDQ KKMV+Q+ FL+ RIAKA + L++ ++D+RE E+  +MFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LLAGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELL---------SSAVAVEHNQ---- 178
           L+ G      LN++DLNDLG++++Q + D+++RIE+L         SS+VAV  ++    
Sbjct: 121 LI-GNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEIGESSSVAVAASEGNIP 180

[Close]

BLAST of Cp4.1LG09g06630 vs. ExPASy Swiss-Prot
Match: Q7XJK8 (MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.5e-35
Identity = 75/155 (48.39%), Postives = 105/155 (67.74%), Query Frame = 0


Query: 3   RKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPSLV 62
           ++K+KL+ I N  +RK TF KRKKG  KKLTEL TLCG++ACA+++SPFNS P+ WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQSLL 122
           GV  V+S F  L  +D+ KKMV+Q+TF+  RIAK  +QL+KL+ +N   +I  LMF   L
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMF-GCL 121

Query: 123 AGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELL 158
            G      L+  DL DL   +D+ +  +++RIE+L
Sbjct: 122 KGETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEIL 155

[Close]

BLAST of Cp4.1LG09g06630 vs. ExPASy Swiss-Prot
Match: O80805 (MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.6e-34
Identity = 83/189 (43.92%), Postives = 115/189 (60.85%), Query Frame = 0


Query: 3   RKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPSLV 62
           R K+KL+FI ND+ RK TF KRKKG LKK  EL TLCG+DACA+I SP+NS  + WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQSLL 122
           GV  V+S F     +D+ KKMV+Q+TFLR RIAK  ++L+KL+ +NR  +I  LMF   L
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMF-GCL 121

Query: 123 AGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEPSWFIEM 182
            G      L+  DL DL   +++ +  + +R+E+L        + PP +  V P+     
Sbjct: 122 KGEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGESSSSVPPPIG-VAPTVVDAS 181

Query: 183 VNQEYDDQM 192
           V   +D +M
Sbjct: 182 VPIGFDGRM 188

[Close]

BLAST of Cp4.1LG09g06630 vs. ExPASy Swiss-Prot
Match: Q7XJK6 (Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.4e-28
Identity = 69/173 (39.88%), Postives = 102/173 (58.96%), Query Frame = 0


Query: 4   KKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPSLVG 63
           KKVKL+ I N+ +RK +F KRK G  KKL EL+TLCG+ ACA+I+SPF   P+ WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  VHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQSLLA 123
              V S F  +P   + KKM++Q+T+L  RI KA +QLK L  +NRE ++   MF   + 
Sbjct: 62  AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQVRRFMF-DCVE 121

Query: 124 GGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEP 177
           G   +   +  DL DL   ++  +  ++ RIE      +++ N    +++V P
Sbjct: 122 GKMSQYHYDAKDLQDLQSCINLYLDQLNGRIE------SIKENGESLLSSVSP 167

[Close]

BLAST of Cp4.1LG09g06630 vs. ExPASy Swiss-Prot
Match: Q7XJK5 (Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=1 SV=2)

HSP 1 Score: 123.2 bits (308), Expect = 3.5e-27
Identity = 68/173 (39.31%), Postives = 101/173 (58.38%), Query Frame = 0


Query: 4   KKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPSLVG 63
           KKVKL+ I N+ +RK +F KRK G  KKL EL+TLCG+ ACA+I+SPF   P+ WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  VHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQSLLA 123
              V S F  +P   + +KM++Q+T L  RI KA +QLK L  +NRE ++   MF   + 
Sbjct: 62  AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQVRRFMF-DCVE 121

Query: 124 GGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEP 177
           G   +   +  DL DL   ++  +  ++ RIE      +++ N    +++V P
Sbjct: 122 GKMSQYRYDAKDLQDLLSCMNLYLDQLNGRIE------SIKENGESLLSSVSP 167

[Close]

BLAST of Cp4.1LG09g06630 vs. NCBI nr
Match: XP_023542111.1 (agamous-like MADS-box protein AGL80 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 444 bits (1143), Expect = 1.62e-157
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60
           MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS
Sbjct: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60

Query: 61  LVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQS 120
           LVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQS
Sbjct: 61  LVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQS 120

Query: 121 LLAGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEPSWFI 180
           LLAGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEPSWFI
Sbjct: 121 LLAGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEPSWFI 180

Query: 181 EMVNQEYDDQMRFDIGDDVIQLPTFGEDGWPNNAFFPSN 219
           EMVNQEYDDQMRFDIGDDVIQLPTFGEDGWPNNAFFPSN
Sbjct: 181 EMVNQEYDDQMRFDIGDDVIQLPTFGEDGWPNNAFFPSN 219

[Close]

BLAST of Cp4.1LG09g06630 vs. NCBI nr
Match: KAG6573551.1 (Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012657.1 Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 415 bits (1067), Expect = 5.83e-146
Identity = 204/217 (94.01%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60
           MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS
Sbjct: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60

Query: 61  LVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQS 120
           LVGV  VISHFKALPEM+QCKKMVNQ+TFLRHRIAKAADQLKKLQR+NREKEIAH+MFQ+
Sbjct: 61  LVGVQRVISHFKALPEMEQCKKMVNQETFLRHRIAKAADQLKKLQRENREKEIAHVMFQT 120

Query: 121 LLAGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEPSWFI 180
           L+AGGAPRPTLNVIDLNDLGWLVDQKMADI KRIELL SAVAVE NQPPCVATVEPSWFI
Sbjct: 121 LVAGGAPRPTLNVIDLNDLGWLVDQKMADICKRIELLRSAVAVEQNQPPCVATVEPSWFI 180

Query: 181 EMVNQEYDDQMRFDIGDDVIQLPTFGEDGWPNNAFFP 217
           EMVNQE DDQMRF+IGDDVIQLPTFGEDGWPNNAFFP
Sbjct: 181 EMVNQECDDQMRFNIGDDVIQLPTFGEDGWPNNAFFP 217

[Close]

BLAST of Cp4.1LG09g06630 vs. NCBI nr
Match: XP_022931807.1 (agamous-like MADS-box protein AGL80 [Cucurbita moschata])

HSP 1 Score: 415 bits (1066), Expect = 8.28e-146
Identity = 204/217 (94.01%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60
           MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS
Sbjct: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60

Query: 61  LVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQS 120
           LVGV  VISHFKALPEM+QCKKMVNQ+TFLRHRIAKAADQLKKLQR+NREKEIAH+MFQS
Sbjct: 61  LVGVQRVISHFKALPEMEQCKKMVNQETFLRHRIAKAADQLKKLQRENREKEIAHVMFQS 120

Query: 121 LLAGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEPSWFI 180
           L+AGGAPRP+LNVIDLNDLGWLVDQKMADI KRIELL SAVAVE NQPPCVATVEPSWFI
Sbjct: 121 LVAGGAPRPSLNVIDLNDLGWLVDQKMADICKRIELLRSAVAVEENQPPCVATVEPSWFI 180

Query: 181 EMVNQEYDDQMRFDIGDDVIQLPTFGEDGWPNNAFFP 217
           EMVNQE DDQMRF+IGDDVIQLPTFGEDGWPNNAFFP
Sbjct: 181 EMVNQECDDQMRFNIGDDVIQLPTFGEDGWPNNAFFP 217

[Close]

BLAST of Cp4.1LG09g06630 vs. NCBI nr
Match: XP_038895832.1 (agamous-like MADS-box protein AGL80 [Benincasa hispida])

HSP 1 Score: 305 bits (781), Expect = 2.25e-102
Identity = 158/224 (70.54%), Postives = 179/224 (79.91%), Query Frame = 0


Query: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60
           MTRKKVKL +ITND ARKATF KRKKG LKKL ELTTLCGI+ACAIIF+PFNS PDLWPS
Sbjct: 1   MTRKKVKLAYITNDTARKATFNKRKKGLLKKLNELTTLCGIEACAIIFNPFNSQPDLWPS 60

Query: 61  LVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQS 120
            +G+  V+S FK+LPEM+QCKKMVNQ+T+L  RIAKA DQLKKLQR+NREKEIA LMFQS
Sbjct: 61  ALGLQRVLSKFKSLPEMEQCKKMVNQETYLCDRIAKATDQLKKLQRENREKEIARLMFQS 120

Query: 121 LLAGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEPSWFI 180
           L AGG P P LNVIDLNDLGWLVDQK+AD+ KR+ELL        NQ    AT EPSWF+
Sbjct: 121 LAAGGTPPPDLNVIDLNDLGWLVDQKVADVGKRMELLRV------NQSMRAATREPSWFM 180

Query: 181 EMVNQEYDD--QMRFDIGDDVIQLPTFGEDG-----WPNNAFFP 217
           EM+++  DD  QM+F+IGDDVIQLP+FGED      W NN  FP
Sbjct: 181 EMMSRGVDDEDQMKFNIGDDVIQLPSFGEDDNHGAFWSNNTLFP 218

[Close]

BLAST of Cp4.1LG09g06630 vs. NCBI nr
Match: XP_008458956.1 (PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo] >KAA0054322.1 agamous-like MADS-box protein AGL80 [Cucumis melo var. makuwa] >TYK12358.1 agamous-like MADS-box protein AGL80 [Cucumis melo var. makuwa])

HSP 1 Score: 305 bits (780), Expect = 3.30e-102
Identity = 160/224 (71.43%), Postives = 179/224 (79.91%), Query Frame = 0


Query: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60
           MTRKKVKL +ITNDA+RKATFKKRKKG LKKL ELTTLCGI+ACAIIF+P NS PDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  LVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQS 120
            +G+  V+S FK+LPEM+QCKKMVNQ+TFLR RIAKAADQLKKLQR+NREKEI  LMFQS
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120

Query: 121 LLAGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEPSWFI 180
           L+AG  P P LNVIDLNDLGWLVDQKMADI KR+E L+   +  H     VAT EPSWF+
Sbjct: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSH-----VATNEPSWFM 180

Query: 181 EMVNQ--EYDDQMRFDIGDDVIQLPTFGEDG-----WPNNAFFP 217
           EMVNQ    +D M F+IGDDVIQLP+FGE       W NN  FP
Sbjct: 181 EMVNQGGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNNVIFP 219

[Close]

BLAST of Cp4.1LG09g06630 vs. ExPASy TrEMBL
Match: A0A6J1EUR5 (agamous-like MADS-box protein AGL80 OS=Cucurbita moschata OX=3662 GN=LOC111438097 PE=4 SV=1)

HSP 1 Score: 415 bits (1066), Expect = 4.01e-146
Identity = 204/217 (94.01%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60
           MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS
Sbjct: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60

Query: 61  LVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQS 120
           LVGV  VISHFKALPEM+QCKKMVNQ+TFLRHRIAKAADQLKKLQR+NREKEIAH+MFQS
Sbjct: 61  LVGVQRVISHFKALPEMEQCKKMVNQETFLRHRIAKAADQLKKLQRENREKEIAHVMFQS 120

Query: 121 LLAGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEPSWFI 180
           L+AGGAPRP+LNVIDLNDLGWLVDQKMADI KRIELL SAVAVE NQPPCVATVEPSWFI
Sbjct: 121 LVAGGAPRPSLNVIDLNDLGWLVDQKMADICKRIELLRSAVAVEENQPPCVATVEPSWFI 180

Query: 181 EMVNQEYDDQMRFDIGDDVIQLPTFGEDGWPNNAFFP 217
           EMVNQE DDQMRF+IGDDVIQLPTFGEDGWPNNAFFP
Sbjct: 181 EMVNQECDDQMRFNIGDDVIQLPTFGEDGWPNNAFFP 217

[Close]

BLAST of Cp4.1LG09g06630 vs. ExPASy TrEMBL
Match: A0A5A7UEU7 (Agamous-like MADS-box protein AGL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001350 PE=4 SV=1)

HSP 1 Score: 305 bits (780), Expect = 1.60e-102
Identity = 160/224 (71.43%), Postives = 179/224 (79.91%), Query Frame = 0


Query: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60
           MTRKKVKL +ITNDA+RKATFKKRKKG LKKL ELTTLCGI+ACAIIF+P NS PDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  LVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQS 120
            +G+  V+S FK+LPEM+QCKKMVNQ+TFLR RIAKAADQLKKLQR+NREKEI  LMFQS
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120

Query: 121 LLAGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEPSWFI 180
           L+AG  P P LNVIDLNDLGWLVDQKMADI KR+E L+   +  H     VAT EPSWF+
Sbjct: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSH-----VATNEPSWFM 180

Query: 181 EMVNQ--EYDDQMRFDIGDDVIQLPTFGEDG-----WPNNAFFP 217
           EMVNQ    +D M F+IGDDVIQLP+FGE       W NN  FP
Sbjct: 181 EMVNQGGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNNVIFP 219

[Close]

BLAST of Cp4.1LG09g06630 vs. ExPASy TrEMBL
Match: A0A1S3C968 (agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103498216 PE=4 SV=1)

HSP 1 Score: 305 bits (780), Expect = 1.60e-102
Identity = 160/224 (71.43%), Postives = 179/224 (79.91%), Query Frame = 0


Query: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60
           MTRKKVKL +ITNDA+RKATFKKRKKG LKKL ELTTLCGI+ACAIIF+P NS PDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  LVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQS 120
            +G+  V+S FK+LPEM+QCKKMVNQ+TFLR RIAKAADQLKKLQR+NREKEI  LMFQS
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120

Query: 121 LLAGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEPSWFI 180
           L+AG  P P LNVIDLNDLGWLVDQKMADI KR+E L+   +  H     VAT EPSWF+
Sbjct: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSH-----VATNEPSWFM 180

Query: 181 EMVNQ--EYDDQMRFDIGDDVIQLPTFGEDG-----WPNNAFFP 217
           EMVNQ    +D M F+IGDDVIQLP+FGE       W NN  FP
Sbjct: 181 EMVNQGGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNNVIFP 219

[Close]

BLAST of Cp4.1LG09g06630 vs. ExPASy TrEMBL
Match: A0A0A0LVU5 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G191680 PE=4 SV=1)

HSP 1 Score: 300 bits (769), Expect = 7.54e-101
Identity = 160/225 (71.11%), Postives = 181/225 (80.44%), Query Frame = 0


Query: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60
           MTRKKVKL +ITNDA+RKATFKKRKKG LKKL ELTTLCGI+ACAIIF+P NS PDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  LVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQS 120
            +G+  V+S FK+LPEM+QCKKMVNQ+TFLR RIAKAADQLKKLQR+NREKEI  +MFQS
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120

Query: 121 LLAGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEPSWFI 180
           L+AG  P   LNVIDLNDLGWLVDQKMADI KR+ELL+       N+   VAT EPSWF+
Sbjct: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTV------NRSSRVATNEPSWFM 180

Query: 181 EMVNQEYDDQ--MRFDIGDDVIQLPTFGEDG-----WPNN-AFFP 217
           EMVNQ  +D+  M F+IGDDVIQLP+FGED      W NN   FP
Sbjct: 181 EMVNQGANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNNNVIFP 219

[Close]

BLAST of Cp4.1LG09g06630 vs. ExPASy TrEMBL
Match: A0A6J1KLQ8 (agamous-like MADS-box protein AGL80 OS=Cucurbita maxima OX=3661 GN=LOC111495707 PE=4 SV=1)

HSP 1 Score: 286 bits (732), Expect = 2.80e-95
Identity = 148/217 (68.20%), Postives = 172/217 (79.26%), Query Frame = 0


Query: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60
           MTRKKVKLT+ITNDAARKATFKKRKKG +KKLTELTTLCGI+ACAIIFSPFNS PDLWPS
Sbjct: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60

Query: 61  LVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQS 120
           +VG+  V++ FK+L EM+QC KMVNQ+TFLR RIAKA DQLKKLQR+ REKEI  LMF+S
Sbjct: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120

Query: 121 LLAGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEPSWFI 180
           L+AG  P   LN+IDL DL WLVD+ M D+ KRIELL++ +     +P  V+ VEPSWF+
Sbjct: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMT----EPQVVSAVEPSWFM 180

Query: 181 EMVNQE-YDDQMRFDIGDDVIQLPTFGEDG--WPNNA 214
           EM++ E YDDQM F I DDVIQLP     G  W NN 
Sbjct: 181 EMMSHEAYDDQMGFKIWDDVIQLPNDDNHGAFWSNNG 213

[Close]

BLAST of Cp4.1LG09g06630 vs. TAIR 10
Match: AT5G48670.1 (AGAMOUS-like 80 )

HSP 1 Score: 191.8 bits (486), Expect = 5.7e-49
Identity = 99/191 (51.83%), Postives = 141/191 (73.82%), Query Frame = 0


Query: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60
           MTRKKVKL +I+ND++RKATFKKRKKG +KK+ EL+TLCGI ACAII+SP+++ P++WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  LVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQS 120
             GV  V+S F+ LPEMDQ KKMV+Q+ FL+ RIAKA + L++ ++D+RE E+  +MFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LLAGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELL---------SSAVAVEHNQ---- 178
           L+ G      LN++DLNDLG++++Q + D+++RIE+L         SS+VAV  ++    
Sbjct: 121 LI-GNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEIGESSSVAVAASEGNIP 180

[Close]

BLAST of Cp4.1LG09g06630 vs. TAIR 10
Match: AT5G26630.1 (MADS-box transcription factor family protein )

HSP 1 Score: 153.3 bits (386), Expect = 2.3e-37
Identity = 73/157 (46.50%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60
           MTR+KVK+TFI N+ ARK+TFKKRKKG LKK  EL  LCG+   A++ SP+   P++WPS
Sbjct: 1   MTRQKVKMTFIENETARKSTFKKRKKGLLKKAQELGILCGVPIFAVVNSPYELNPEVWPS 60

Query: 61  LVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQS 120
               + V+S +K +  MD+ KKMVNQ+TFL+ RI KA +  KKL+++N+E E+ ++MF  
Sbjct: 61  REAANQVVSQWKTMSVMDKTKKMVNQETFLQQRITKATESWKKLRKENKELEMKNIMF-D 120

Query: 121 LLAGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELL 158
            L+G     ++   +L D G++++Q++ D+++RIE+L
Sbjct: 121 CLSGKTLVSSIEKTELRDFGYVIEQQLKDVNRRIEIL 156

[Close]

BLAST of Cp4.1LG09g06630 vs. TAIR 10
Match: AT1G65300.1 (AGAMOUS-like 38 )

HSP 1 Score: 149.8 bits (377), Expect = 2.5e-36
Identity = 75/155 (48.39%), Postives = 105/155 (67.74%), Query Frame = 0


Query: 3   RKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPSLV 62
           ++K+KL+ I N  +RK TF KRKKG  KKLTEL TLCG++ACA+++SPFNS P+ WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQSLL 122
           GV  V+S F  L  +D+ KKMV+Q+TF+  RIAK  +QL+KL+ +N   +I  LMF   L
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMF-GCL 121

Query: 123 AGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELL 158
            G      L+  DL DL   +D+ +  +++RIE+L
Sbjct: 122 KGETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEIL 155

[Close]

BLAST of Cp4.1LG09g06630 vs. TAIR 10
Match: AT1G65330.1 (MADS-box transcription factor family protein )

HSP 1 Score: 145.6 bits (366), Expect = 4.7e-35
Identity = 83/189 (43.92%), Postives = 115/189 (60.85%), Query Frame = 0


Query: 3   RKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPSLV 62
           R K+KL+FI ND+ RK TF KRKKG LKK  EL TLCG+DACA+I SP+NS  + WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQSLL 122
           GV  V+S F     +D+ KKMV+Q+TFLR RIAK  ++L+KL+ +NR  +I  LMF   L
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMF-GCL 121

Query: 123 AGGAPRPTLNVIDLNDLGWLVDQKMADISKRIELLSSAVAVEHNQPPCVATVEPSWFIEM 182
            G      L+  DL DL   +++ +  + +R+E+L        + PP +  V P+     
Sbjct: 122 KGEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGESSSSVPPPIG-VAPTVVDAS 181

Query: 183 VNQEYDDQM 192
           V   +D +M
Sbjct: 182 VPIGFDGRM 188

[Close]

BLAST of Cp4.1LG09g06630 vs. TAIR 10
Match: AT3G05860.3 (MADS-box transcription factor family protein )

HSP 1 Score: 135.2 bits (339), Expect = 6.4e-32
Identity = 80/202 (39.60%), Postives = 119/202 (58.91%), Query Frame = 0


Query: 1   MTRKKVKLTFITNDAARKATFKKRKKGFLKKLTELTTLCGIDACAIIFSPFNSYPDLWPS 60
           MTRKK+ L++ITN++ RKATF KRKKG +KK+ EL+ LCGI+ACA+I+SPFNS P++WPS
Sbjct: 1   MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61  LVGVHSVISHFKALPEMDQCKKMVNQDTFLRHRIAKAADQLKKLQRDNREKEIAHLMFQS 120
              V +V+ +F+ L +++Q KKMV+ + F+R  I+K  +   K   DN E+ +   MFQ 
Sbjct: 61  NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMFQ- 120

Query: 121 LLAGGAPRPTLNVIDLNDLGWLVDQKMADI---------SKRIELLSSAVAVEHNQPPCV 180
           LL+G   +  L   +  DL   +DQ + ++            IE   S+ A     P  V
Sbjct: 121 LLSGKGEKLNLTDRNREDLCKYIDQYLKELYHHKNKTINQSHIEPGESSGATNAMTPTSV 180

Query: 181 ATVEPSWFIEMVNQEYDDQMRF 194
             VE   F  + + +Y  Q +F
Sbjct: 181 --VENPNFNHLSHNQYQYQQQF 199

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g06630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJK3	8.1e-48	51.83	Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=...	[more]
Q7XJK8	3.5e-35	48.39	MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 P...	[more]
O80805	6.6e-34	43.92	MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 P...	[more]
Q7XJK6	5.4e-28	39.88	Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=...	[more]
Q7XJK5	3.5e-27	39.31	Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=...	[more]

BLAST of Cp4.1LG09g06630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542111.1	1.62e-157	100.00	agamous-like MADS-box protein AGL80 [Cucurbita pepo subsp. pepo]	[more]
KAG6573551.1	5.83e-146	94.01	Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022931807.1	8.28e-146	94.01	agamous-like MADS-box protein AGL80 [Cucurbita moschata]	[more]
XP_038895832.1	2.25e-102	70.54	agamous-like MADS-box protein AGL80 [Benincasa hispida]	[more]
XP_008458956.1	3.30e-102	71.43	PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo] >KAA0054322.1 agam...	[more]

BLAST of Cp4.1LG09g06630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EUR5	4.01e-146	94.01	agamous-like MADS-box protein AGL80 OS=Cucurbita moschata OX=3662 GN=LOC11143809...	[more]
A0A5A7UEU7	1.60e-102	71.43	Agamous-like MADS-box protein AGL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3C968	1.60e-102	71.43	agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103498216 PE=4...	[more]
A0A0A0LVU5	7.54e-101	71.11	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G191680 PE...	[more]
A0A6J1KLQ8	2.80e-95	68.20	agamous-like MADS-box protein AGL80 OS=Cucurbita maxima OX=3661 GN=LOC111495707 ...	[more]

BLAST of Cp4.1LG09g06630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48670.1	5.7e-49	51.83	AGAMOUS-like 80	[more]
AT5G26630.1	2.3e-37	46.50	MADS-box transcription factor family protein	[more]
AT1G65300.1	2.5e-36	48.39	AGAMOUS-like 38	[more]
AT1G65330.1	4.7e-35	43.92	MADS-box transcription factor family protein	[more]
AT3G05860.3	6.4e-32	39.60	MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..171
None	No IPR available	PANTHER	PTHR48019:SF17	AGAMOUS-LIKE MADS-BOX PROTEIN AGL80	coord: 1..171
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 38..59 score: 24.43 coord: 23..38 score: 54.76 coord: 3..23 score: 39.76
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.1E-22 score: 91.3
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..51 e-value: 3.5E-16 score: 58.5
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..49 score: 16.60976
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..97 e-value: 3.1E-16 score: 61.2
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 1..85
IPR033897	MADS SRF-like	CDD	cd00266	MADS_SRF_like	coord: 2..85 e-value: 3.15263E-17 score: 71.5223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g06630.1	Cp4.1LG09g06630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0000987	cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding